NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|221499224|ref|NP_573349|]
View 

twiggy, isoform C [Drosophila melanogaster]

Protein Classification

glycosyltransferase family protein( domain architecture ID 229488)

glycosyltransferase family protein may synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Galactosyl_T super family cl21608
Galactosyltransferase; This family includes the galactosyltransferases UDP-galactose: ...
 103-270 8.99e-14

Galactosyltransferase; This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2.


The actual alignment was detected with superfamily member pfam02434:

Pssm-ID: 473923  Cd Length: 248  Bit Score: 70.43  E-value: 8.99e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221499224  103 VLTTPKYHKTRAIHVLRTWGKRCNKI-YFMTSEPDDELPT-----VVLTKPDRyemlwgktkeafVHIHE----QMRHEA 172
Cdd:pfam02434  10 VKTTKKFHKTRLPLLLKTWISRAKHQtYIFTDGEDEGLPTrtgghLINTNCSA------------GHCRKalscKMAVEY 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221499224  173 D--------WFIKADDDTYLFLENLRYMLYPYSPETPIYFGFNY---------KMVGTHQKNESYMSGGSGYVLSRE-AL 234
Cdd:pfam02434  78 DrflesgkkWFCHVDDDNYVNVPRLVRLLSCYNHTQDVYLGKPSlyrpieateRVKGNRKVGFWFATGGAGFCISRGlAL 157

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 221499224  235 RI--FAEG---VNDTTKCRQEDdhaeDVEMGKCLFN-LGVKA 270
Cdd:pfam02434 158 KMspWASGgrfMSTSEKIRLPD----DCTLGYIIENlLGVPL 195
 
Name Accession Description Interval E-value
Fringe pfam02434
Fringe-like; The drosophila protein fringe (FNG) is a glucosaminyltransferase that controls ...
 103-270 8.99e-14

Fringe-like; The drosophila protein fringe (FNG) is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands. FNG is localized to the Golgi apparatus (not secreted as previously thought). Modification of Notch occurs through glycosylation by FNG. The xenopus homolog, lunatic fringe, has been implicated in a variety of functions.


Pssm-ID: 367085  Cd Length: 248  Bit Score: 70.43  E-value: 8.99e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221499224  103 VLTTPKYHKTRAIHVLRTWGKRCNKI-YFMTSEPDDELPT-----VVLTKPDRyemlwgktkeafVHIHE----QMRHEA 172
Cdd:pfam02434  10 VKTTKKFHKTRLPLLLKTWISRAKHQtYIFTDGEDEGLPTrtgghLINTNCSA------------GHCRKalscKMAVEY 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221499224  173 D--------WFIKADDDTYLFLENLRYMLYPYSPETPIYFGFNY---------KMVGTHQKNESYMSGGSGYVLSRE-AL 234
Cdd:pfam02434  78 DrflesgkkWFCHVDDDNYVNVPRLVRLLSCYNHTQDVYLGKPSlyrpieateRVKGNRKVGFWFATGGAGFCISRGlAL 157

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 221499224  235 RI--FAEG---VNDTTKCRQEDdhaeDVEMGKCLFN-LGVKA 270
Cdd:pfam02434 158 KMspWASGgrfMSTSEKIRLPD----DCTLGYIIENlLGVPL 195
 
Name Accession Description Interval E-value
Fringe pfam02434
Fringe-like; The drosophila protein fringe (FNG) is a glucosaminyltransferase that controls ...
 103-270 8.99e-14

Fringe-like; The drosophila protein fringe (FNG) is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands. FNG is localized to the Golgi apparatus (not secreted as previously thought). Modification of Notch occurs through glycosylation by FNG. The xenopus homolog, lunatic fringe, has been implicated in a variety of functions.


Pssm-ID: 367085  Cd Length: 248  Bit Score: 70.43  E-value: 8.99e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221499224  103 VLTTPKYHKTRAIHVLRTWGKRCNKI-YFMTSEPDDELPT-----VVLTKPDRyemlwgktkeafVHIHE----QMRHEA 172
Cdd:pfam02434  10 VKTTKKFHKTRLPLLLKTWISRAKHQtYIFTDGEDEGLPTrtgghLINTNCSA------------GHCRKalscKMAVEY 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221499224  173 D--------WFIKADDDTYLFLENLRYMLYPYSPETPIYFGFNY---------KMVGTHQKNESYMSGGSGYVLSRE-AL 234
Cdd:pfam02434  78 DrflesgkkWFCHVDDDNYVNVPRLVRLLSCYNHTQDVYLGKPSlyrpieateRVKGNRKVGFWFATGGAGFCISRGlAL 157

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 221499224  235 RI--FAEG---VNDTTKCRQEDdhaeDVEMGKCLFN-LGVKA 270
Cdd:pfam02434 158 KMspWASGgrfMSTSEKIRLPD----DCTLGYIIENlLGVPL 195
Galactosyl_T pfam01762
Galactosyltransferase; This family includes the galactosyltransferases UDP-galactose: ...
 148-269 1.24e-03

Galactosyltransferase; This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2.


Pssm-ID: 426415 [Multi-domain]  Cd Length: 195  Bit Score: 39.61  E-value: 1.24e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221499224  148 DRYEMLWGKTKEAFVHIHEqMRHEADWFIKADDDTYLFLENL-RYMLYPYSPETPIYFgFNYKM----VGTHQKNESYMS 222
Cdd:pfam01762  58 DTYENLTFKTLTGLLWAVS-KCPSAKYIGKIDDDVYFFPDKLlSLLDNGNIDPSESSF-YGYVMeegpVIRNKKSKWYVS 135

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 221499224  223 -------------GGSGYVLSREAlrifAEGVNDTTKCRQEdDHAEDVEMGKCLFNLGVK 269
Cdd:pfam01762 136 psdykcsryppyaSGPFYVLSRDA----AEKLLKASKHRRF-LQIEDVYVGILANDLGIS 190
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH