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Conserved domains on  [gi|19076005|ref|NP_588505|]
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F0-ATPase delta subunit atp5 [Schizosaccharomyces pombe]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 39-212 1.52e-54

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


:

Pssm-ID: 459714  Cd Length: 172  Bit Score: 171.93  E-value: 1.52e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005    39 LDGSYASSLYTAAVKESKLDNVEKALNKLSGVLQQRPEFEQYISSPWLTREDKKILVSSLTQMTGNePLLKNFYNVLLDN 118
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAENPDLAAFLSNPTISAEEKKALLLELFKGLLS-PLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005   119 HRLYLLTRIQKQFSTLMRAKRGEIEVKITSATPLDSKILSRLESRIAKsKYGKGKLLVSNKVTPSIIGGLIVEIGDNILD 198
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEK-KTGKKKVKLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 19076005   199 VSVGSRLNNLNKLL 212
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
 
Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 39-212 1.52e-54

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 171.93  E-value: 1.52e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005    39 LDGSYASSLYTAAVKESKLDNVEKALNKLSGVLQQRPEFEQYISSPWLTREDKKILVSSLTQMTGNePLLKNFYNVLLDN 118
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAENPDLAAFLSNPTISAEEKKALLLELFKGLLS-PLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005   119 HRLYLLTRIQKQFSTLMRAKRGEIEVKITSATPLDSKILSRLESRIAKsKYGKGKLLVSNKVTPSIIGGLIVEIGDNILD 198
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEK-KTGKKKVKLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 19076005   199 VSVGSRLNNLNKLL 212
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 43-214 9.93e-43

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 141.83  E-value: 9.93e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005  43 YASSLYTAAVKESKLDNVEKALNKLSGVLQQRPEFEQYISSPWLTREDKKILVSSLTQMTGNePLLKNFYNVLLDNHRLY 122
Cdd:COG0712  10 YAKALFELAKEKGALDEVEEELFALAALLAENPELRALLSSPVISAEEKKELLEALFGGKLS-PETLNFLKLLVENGRLA 88

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005 123 LLTRIQKQFSTLMRAKRGEIEVKITSATPLDSKILSRLESRIAKsKYGKgKLLVSNKVTPSIIGGLIVEIGDNILDVSVG 202
Cdd:COG0712  89 LLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEK-KTGK-KVELNVKVDPSLIGGVVVRVGDKVIDGSVR 166

                       170
                ....*....|..
gi 19076005 203 SRLNNLNKLLSE 214
Cdd:COG0712 167 GRLNRLRRALKG 178
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 43-212 3.14e-38

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 130.29  E-value: 3.14e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005   43 YASSLYTAAVKESKLDNVEKALNKLSgVLQQRPEFEQYISSPWLTREDKKILVSSLTQmtGNEPLLKNFYNVLLDNHRLY 122
Cdd:PRK05758  11 YAKALFEVALEKGSLDAWSEELTFLA-EVAENEDLAALLSSPLVSAEQKKKLLAAVFK--SLSEYVQNFLKVLAENGRLA 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005  123 LLTRIQKQFSTLMRAKRGEIEVKITSATPLDSKILSRLESRIAKsKYGKgKLLVSNKVTPSIIGGLIVEIGDNILDVSVG 202
Cdd:PRK05758  88 LLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEK-RLGR-KVKLNEKVDPSLIGGVIIKVGDRVIDGSVR 165

                        170
                 ....*....|
gi 19076005  203 SRLNNLNKLL 212
Cdd:PRK05758 166 GKLERLKDAL 175
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 43-212 1.58e-28

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 105.09  E-value: 1.58e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005    43 YASSLYTAAVKESKLDNVEKALNKLSGVLQQRPEFEQYISSPWLTREDKK-----ILVSSLTQMTgnepllKNFYNVLLD 117
Cdd:TIGR01145   5 YAKALFEIANEKSSLEEWGEMLNFVKEVLKNNKELKKFLSNPLISAEKKKefiknVFGEQLDESS------LNLLLLLAE 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005   118 NHRLYLLTRIQKQFSTLMRAKRGEIEVKITSATPLDSKILSRLESRIAKsKYGKGKLLVSNKVTPSIIGGLIVEIGDNIL 197
Cdd:TIGR01145  79 NGRLAALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEK-ITGAAKVKLNCKVDKDLIGGVIIRIGDRVI 157

                         170
                  ....*....|....*
gi 19076005   198 DVSVGSRLNNLNKLL 212
Cdd:TIGR01145 158 DGSVRGQLKRLSRQL 172
 
Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 39-212 1.52e-54

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 171.93  E-value: 1.52e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005    39 LDGSYASSLYTAAVKESKLDNVEKALNKLSGVLQQRPEFEQYISSPWLTREDKKILVSSLTQMTGNePLLKNFYNVLLDN 118
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAENPDLAAFLSNPTISAEEKKALLLELFKGLLS-PLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005   119 HRLYLLTRIQKQFSTLMRAKRGEIEVKITSATPLDSKILSRLESRIAKsKYGKGKLLVSNKVTPSIIGGLIVEIGDNILD 198
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEK-KTGKKKVKLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 19076005   199 VSVGSRLNNLNKLL 212
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 43-214 9.93e-43

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 141.83  E-value: 9.93e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005  43 YASSLYTAAVKESKLDNVEKALNKLSGVLQQRPEFEQYISSPWLTREDKKILVSSLTQMTGNePLLKNFYNVLLDNHRLY 122
Cdd:COG0712  10 YAKALFELAKEKGALDEVEEELFALAALLAENPELRALLSSPVISAEEKKELLEALFGGKLS-PETLNFLKLLVENGRLA 88

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005 123 LLTRIQKQFSTLMRAKRGEIEVKITSATPLDSKILSRLESRIAKsKYGKgKLLVSNKVTPSIIGGLIVEIGDNILDVSVG 202
Cdd:COG0712  89 LLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEK-KTGK-KVELNVKVDPSLIGGVVVRVGDKVIDGSVR 166

                       170
                ....*....|..
gi 19076005 203 SRLNNLNKLLSE 214
Cdd:COG0712 167 GRLNRLRRALKG 178
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 43-212 3.14e-38

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 130.29  E-value: 3.14e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005   43 YASSLYTAAVKESKLDNVEKALNKLSgVLQQRPEFEQYISSPWLTREDKKILVSSLTQmtGNEPLLKNFYNVLLDNHRLY 122
Cdd:PRK05758  11 YAKALFEVALEKGSLDAWSEELTFLA-EVAENEDLAALLSSPLVSAEQKKKLLAAVFK--SLSEYVQNFLKVLAENGRLA 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005  123 LLTRIQKQFSTLMRAKRGEIEVKITSATPLDSKILSRLESRIAKsKYGKgKLLVSNKVTPSIIGGLIVEIGDNILDVSVG 202
Cdd:PRK05758  88 LLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEK-RLGR-KVKLNEKVDPSLIGGVIIKVGDRVIDGSVR 165

                        170
                 ....*....|
gi 19076005  203 SRLNNLNKLL 212
Cdd:PRK05758 166 GKLERLKDAL 175
PRK13429 PRK13429
F0F1 ATP synthase subunit delta; Provisional
 43-208 7.42e-34

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237386  Cd Length: 181  Bit Score: 119.15  E-value: 7.42e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005   43 YASSLYTAAVKESKLDNVEKALNKLSGVLQQRPEFEQYISSPWLTREDKKILVSSLTQMTGNEPLLKNFYNVLLDNHRLY 122
Cdd:PRK13429  10 YAKALFQLAKEKGQLDSVYEELKQLAELLEDSPELRDALSNPVLSAEEKKAVLEKLLGKLKVSPEVLNFLKLLADRRRLG 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005  123 LLTRIQKQFSTLMRAKRGEIEVKITSATPLDSKILSRLESRIAKsKYGKgKLLVSNKVTPSIIGGLIVEIGDNILDVSVG 202
Cdd:PRK13429  90 ILPEIAARYLELADEQKGIVRATVTSAVPLSEAQQEAIRQKLEK-MTGK-KVELDTAVDPSLIGGVVVKIGDKVLDASVR 167


                 ....*.
gi 19076005  203 SRLNNL 208
Cdd:PRK13429 168 TQLRRL 173
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 43-212 1.58e-28

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 105.09  E-value: 1.58e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005    43 YASSLYTAAVKESKLDNVEKALNKLSGVLQQRPEFEQYISSPWLTREDKK-----ILVSSLTQMTgnepllKNFYNVLLD 117
Cdd:TIGR01145   5 YAKALFEIANEKSSLEEWGEMLNFVKEVLKNNKELKKFLSNPLISAEKKKefiknVFGEQLDESS------LNLLLLLAE 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005   118 NHRLYLLTRIQKQFSTLMRAKRGEIEVKITSATPLDSKILSRLESRIAKsKYGKGKLLVSNKVTPSIIGGLIVEIGDNIL 197
Cdd:TIGR01145  79 NGRLAALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEK-ITGAAKVKLNCKVDKDLIGGVIIRIGDRVI 157

                         170
                  ....*....|....*
gi 19076005   198 DVSVGSRLNNLNKLL 212
Cdd:TIGR01145 158 DGSVRGQLKRLSRQL 172
PRK13430 PRK13430
F0F1 ATP synthase subunit delta; Provisional
 46-208 1.75e-14

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237387 [Multi-domain]  Cd Length: 271  Bit Score: 70.36  E-value: 1.75e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005   46 SLYTAAVKESKLDNVEKALNKLSGVLQQRPEFEQYISSPWLTREDKKILVSSL-------------TQMTGNepLLKNFY 112
Cdd:PRK13430 106 ALLASAEAQGALDDVEDELFRLGRILASNPELRLALSDRAAPAEAKRELLARLlygkvtpvterlaEQAVGR--PRGRSI 183

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005  113 NVLLDnhrlylltriqkQFSTLMRAKRGEIEVKITSATPLDSKILSRLESRIAKsKYGKgKLLVSNKVTPSIIGGLIVEI 192
Cdd:PRK13430 184 EEGLD------------ELSNLAAARRGRSVATVTTAVPLSDEQKQRLAAALSR-IYGR-PVHLNSEVDPSVLGGMRVQV 249

                        170
                 ....*....|....*.
gi 19076005  193 GDNILDVSVGSRLNNL 208
Cdd:PRK13430 250 GDEVIDGSVAGRLERL 265
atpD CHL00119
ATP synthase CF1 delta subunit; Validated
 43-212 3.72e-14

ATP synthase CF1 delta subunit; Validated


Pssm-ID: 177042  Cd Length: 184  Bit Score: 67.70  E-value: 3.72e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005   43 YASSLYTAAVKESKLDNVEKALNKLSGVLQQRPEFEQYISSPWLTREDKKILVSSLTQMTGNEPLLKnFYNVLLDNHRLY 122
Cdd:CHL00119  12 YAEALLEFAKEKNIMEQITADIQLILTFLNESPELKKFLANPLISKNAKKEVIKKTFGSQINENTLK-FLMVLVDRGRIA 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005  123 LLTRIQKQFSTLMRAKRGEIEVKITSATPLDSKILSRLESRI-AKSKYGKGKLLVsnKVTPSIIGGLIVEIGDNILDVSV 201
Cdd:CHL00119  91 LLDAIIEKYLELVYKLASIKIAEVSTAVPLSSAQEEALIEKLkEMTNAKEIKLVI--TVDPSLIGGFLIKIGSKVIDTSI 168

                        170
                 ....*....|.
gi 19076005  202 GSRLNNLNKLL 212
Cdd:CHL00119 169 KGQLKQLASHL 179
PRK13436 PRK13436
F0F1 ATP synthase subunit delta; Provisional
 43-210 6.74e-14

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184053  Cd Length: 179  Bit Score: 67.00  E-value: 6.74e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005   43 YASSLYTAAVKESKLDNVEKALNKLSGVLQQRPEFEQYISSpWLTREDKKILVSSLTQMTGNEPLLKNFYNVLLDNHRLY 122
Cdd:PRK13436  11 YAEALFDIANEENNVEKYINEVFKIIEILKNNKDLIKLLTS-YFIDKEEKFKIIDKIFSAKIDIYLVNFLKILAKNNLFI 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005  123 LLTRIQKQFSTLMRAKRGEIEVKITSATPLDSKILSRLESRIAKsKYGKgKLLVSNKVTPSIIGGLIVEIGDNILDVSVG 202
Cdd:PRK13436  90 YIKQILKKFVKLSNEKLNITYGEIYTTEPLSEVQISRFESKLSK-KLNK-KVHLVNKIDPKLIAGIKIKVDNKVFENSIK 167


                 ....*...
gi 19076005  203 SRLNNLNK 210
Cdd:PRK13436 168 SKLKELKK 175
PRK13434 PRK13434
F0F1 ATP synthase subunit delta; Provisional
 38-214 4.55e-11

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 139571  Cd Length: 184  Bit Score: 59.56  E-value: 4.55e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005   38 GLDGSYASSLYTAAvkeSKLDNVEKALNKLSGVLQQRPEFEQYISSPWLTREDK-KILVSSLTQMTGNepLLKNFYNVLL 116
Cdd:PRK13434   5 GVSKVYASALLGAA---NSPEEVEQELGDLVQLLFKDEKIRNFFLSPTVSPEEKeQTLAKNLRGKISD--ITLNFLGVLL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005  117 DNHRLYLLTRIQKQFSTLMRAKRGEIEVKITSATPLDSKILSRLESRIAkSKYGKgKLLVSNKVTPSIIGGLIVEIGDNI 196
Cdd:PRK13434  80 NKGRFIYLPEIQKDFTVELDKKKGRVRAQIVSYPSLEPAQVDKLGSILS-EKFKS-EFILEVSEDKNLLGGFVVQFNDLK 157

                        170
                 ....*....|....*...
gi 19076005  197 LDVSVGSRLNNLNKLLSE 214
Cdd:PRK13434 158 IEKSIASQLGEIKKAMLE 175
PRK13441 PRK13441
F0F1 ATP synthase subunit delta; Provisional
 41-210 1.71e-10

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184054  Cd Length: 180  Bit Score: 57.84  E-value: 1.71e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005   41 GSYASSLYTAAVKESKLDNVEKALNKLSGVLQQrpeFEQYISSPWLTREDKKILVSSLTQMTGNEP--LLKNFYNVLLDN 118
Cdd:PRK13441   8 SKYARALLNVAIELEKEEEYGEFLDLVCQIYES---AKEFFDNPIVKPEKKVSLIKEIMKEFGQEMdeFFENFLNLVFEN 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005  119 HRLYLLTRIQKQFSTLMRAKRGEIEVKITSATPLDSKILSRLESRIakSKYGKGKLLVSNKVTPSIIGGLIVEIGDNILD 198
Cdd:PRK13441  85 KRQKLLPQIRALFEYEKILSEQKVPVNLTTAHELSDEELKLLRKFV--RKYVLRDPVFEETIDESLIAGAVVEFEGKRLD 162

                        170
                 ....*....|..
gi 19076005  199 VSVGSRLNNLNK 210
Cdd:PRK13441 163 VTVQGRLKKIAR 174
PRK13428 PRK13428
F0F1 ATP synthase subunit delta; Provisional
 47-205 2.28e-07

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184048 [Multi-domain]  Cd Length: 445  Bit Score: 50.50  E-value: 2.28e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005   47 LYTAAVKESKLDNVEKALNKLSGVLQQRPEFEQYISSPWLTREDKkilVSSLTQMTGNEPLLKNFYNVLLdNHRLYLLtR 126
Cdd:PRK13428 279 LLERAERAGQVDEVEDQLFRFSRILDAQPRLAILLSDYTVPADGR---VALLRKVLGGASTVNPVTVALL-SQTVELL-R 353

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005  127 IQK------QFSTLMRAKRGEIEVKITSATPLDSKILSRLE---SRIakskYGKgKLLVSNKVTPSIIGGLIVEIGDNIL 197
Cdd:PRK13428 354 GQPaeeavlFLAELAVARRGEVVAQVSAAAELSDAQRTRLTevlSRI----YGR-PVSVQLHIDPELLGGLSIAVGDEVI 428


                 ....*...
gi 19076005  198 DVSVGSRL 205
Cdd:PRK13428 429 DGTLSSRL 436
PRK08474 PRK08474
F0F1 ATP synthase subunit delta; Validated
 50-216 2.42e-07

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 236271  Cd Length: 176  Bit Score: 48.82  E-value: 2.42e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005   50 AAVKESKLDNVEKALNKLSGVLQQrPEFEQYISSPWLTREDKKILVSSLTQMTGNEplLKNFYNVLLDNHRLYLLTRIQK 129
Cdd:PRK08474  15 SSLSSDELNDIYSNLKILSSAFAD-EKFKEIISSPEISKEQKIEFLLSFVDNANAK--FQNFIKLLAENKRLELIPAIAK 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19076005  130 QFSTLMRAKRGEIEVKITSATPLDSKILSRLESRIakSKYGKGKLLVSNKVTPsiIGGLIVEIGDniLDVSVGSRLNNLN 209
Cdd:PRK08474  92 ELERQIALKENEYVGVVYSNEKLSEETLKKLEEKL--SKKFNAKIKLKQKKSD--YDGIKVEVDD--LGVEVSFSKDRLK 165


                 ....*..
gi 19076005  210 KLLSEPI 216
Cdd:PRK08474 166 NQLIEYI 172
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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