NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|19114612|ref|NP_593700|]
View 

DNAJB family protein [Schizosaccharomyces pombe]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DnaJ_bact super family cl37091
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 34-110 2.17e-10

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


The actual alignment was detected with superfamily member TIGR02349:

Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 60.31  E-value: 2.17e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612    34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKnasqlaptesppeiNKHNEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:TIGR02349   3 YEILGVSKDASEEEIKKAYRKLAKKYHPDRNK--------------DKEAEEKFKEINEAYEVLSDPEKRAQYDQFG 65
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 34-110 2.17e-10

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 60.31  E-value: 2.17e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612    34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKnasqlaptesppeiNKHNEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:TIGR02349   3 YEILGVSKDASEEEIKKAYRKLAKKYHPDRNK--------------DKEAEEKFKEINEAYEVLSDPEKRAQYDQFG 65
DnaJ smart00271
DnaJ molecular chaperone homology domain;
32-71 3.99e-10

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 54.55  E-value: 3.99e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 19114612     32 TPYEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQLA 71
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEA 41
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 32-157 7.59e-10

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 55.86  E-value: 7.59e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19114612  32 TPYEILELPRTCTANDIKRKYIELVKKHHPDKMKNasqlaptesppeiNKHNEEYFRLLLAANALLSDKRRREEYDRFGI 111
Cdd:COG0484   1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPG-------------DPEAEEKFKEINEAYEVLSDPEKRAAYDRFGH 67

                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 19114612 112 HWNQPSHPTHPSPQNWSQARYPTYSRSRRSAGMGSWEEYYYNSYDY 157
Cdd:COG0484  68 AAELLLATELAESAAAEAAAAEAKEEAAEAGASEYEAIAEEASQLR 113
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 32-66 1.42e-09

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 52.93  E-value: 1.42e-09
                        10        20        30
                ....*....|....*....|....*....|....*
gi 19114612  32 TPYEILELPRTCTANDIKRKYIELVKKHHPDKMKN 66
Cdd:cd06257   1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPD 35
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 32-107 5.66e-09

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 51.32  E-value: 5.66e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 19114612    32 TPYEILELPRTCTANDIKRKYIELVKKHHPDkmKNASqlaptesppeiNKHNEEYFRLLLAANALLSDKRRREEYD 107
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPD--KNPG-----------DPEAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 34-116 7.16e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 55.57  E-value: 7.16e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKMknasqlaptespPEINKHNEEYFRLLLAANALLSDKRRREEYDRFGIHW 113
Cdd:PRK14282   7 YEILGVSRNATQEEIKRAYKRLVKEWHPDRH------------PENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVG 74


                 ...
gi 19114612  114 NQP 116
Cdd:PRK14282  75 EQP 77
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
34-110 7.94e-09

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 55.60  E-value: 7.94e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPD--KMKNASQLAptespPEINKHNEeyfrlllaanaLLSDKRRREEYDRFG 110
Cdd:NF037946   8 YEVLGVDRDADDQEIKKAFRKLAKKYHPDrnKAPDAAEIF-----AEINEAYE-----------VLSNPEKRANYDKYG 70
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 34-110 2.17e-10

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 60.31  E-value: 2.17e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612    34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKnasqlaptesppeiNKHNEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:TIGR02349   3 YEILGVSKDASEEEIKKAYRKLAKKYHPDRNK--------------DKEAEEKFKEINEAYEVLSDPEKRAQYDQFG 65
DnaJ smart00271
DnaJ molecular chaperone homology domain;
32-71 3.99e-10

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 54.55  E-value: 3.99e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 19114612     32 TPYEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQLA 71
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEA 41
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 32-157 7.59e-10

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 55.86  E-value: 7.59e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19114612  32 TPYEILELPRTCTANDIKRKYIELVKKHHPDKMKNasqlaptesppeiNKHNEEYFRLLLAANALLSDKRRREEYDRFGI 111
Cdd:COG0484   1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPG-------------DPEAEEKFKEINEAYEVLSDPEKRAAYDRFGH 67

                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 19114612 112 HWNQPSHPTHPSPQNWSQARYPTYSRSRRSAGMGSWEEYYYNSYDY 157
Cdd:COG0484  68 AAELLLATELAESAAAEAAAAEAKEEAAEAGASEYEAIAEEASQLR 113
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 32-66 1.42e-09

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 52.93  E-value: 1.42e-09
                        10        20        30
                ....*....|....*....|....*....|....*
gi 19114612  32 TPYEILELPRTCTANDIKRKYIELVKKHHPDKMKN 66
Cdd:cd06257   1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPD 35
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 32-107 5.66e-09

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 51.32  E-value: 5.66e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 19114612    32 TPYEILELPRTCTANDIKRKYIELVKKHHPDkmKNASqlaptesppeiNKHNEEYFRLLLAANALLSDKRRREEYD 107
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPD--KNPG-----------DPEAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 34-116 7.16e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 55.57  E-value: 7.16e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKMknasqlaptespPEINKHNEEYFRLLLAANALLSDKRRREEYDRFGIHW 113
Cdd:PRK14282   7 YEILGVSRNATQEEIKRAYKRLVKEWHPDRH------------PENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVG 74


                 ...
gi 19114612  114 NQP 116
Cdd:PRK14282  75 EQP 77
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
34-110 7.94e-09

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 55.60  E-value: 7.94e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPD--KMKNASQLAptespPEINKHNEeyfrlllaanaLLSDKRRREEYDRFG 110
Cdd:NF037946   8 YEVLGVDRDADDQEIKKAFRKLAKKYHPDrnKAPDAAEIF-----AEINEAYE-----------VLSNPEKRANYDKYG 70
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 34-110 1.40e-08

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 54.85  E-value: 1.40e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQlaptesppeinkhnEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14298   8 YEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDA--------------EEKFKEISEAYAVLSDAEKRAQYDRFG 70
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
32-126 1.77e-08

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 50.87  E-value: 1.77e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19114612  32 TPYEILELPRTCTANDIKRKYIELVKKHHPDKmknaSQLAPTESPPEINKHNEEYfrlllaanALLSDKRRREEYDRFGI 111
Cdd:COG2214   6 DHYAVLGVPPDASLEEIRQAYRRLAKLLHPDR----GGELKALAEELFQRLNEAY--------EVLSDPERRAEYDRELG 73

                        90
                ....*....|....*
gi 19114612 112 HWNQPSHPTHPSPQN 126
Cdd:COG2214  74 QSGKGSASQPSAAAQ 88
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 34-110 3.58e-08

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 53.65  E-value: 3.58e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDkmknasqLAPTesppeiNKHNEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14277   8 YEILGVDRNATEEEIKKAYRRLAKKYHPD-------LNPG------DKEAEQKFKEINEAYEILSDPQKRAQYDQFG 71
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 34-110 6.00e-08

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 52.89  E-value: 6.00e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNasqlaptesppeiNKHNEEYFRLLLAANALLS--DKRRReeYDRFG 110
Cdd:PRK14281   6 YEVLGVSRSADKDEIKKAYRKLALKYHPDKNPD-------------NKEAEEHFKEVNEAYEVLSndDKRRR--YDQFG 69
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 34-110 1.43e-07

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 51.69  E-value: 1.43e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNasqlaptespPEInkhnEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14291   6 YEILGVSRNATQEEIKKAYRRLARKYHPDFNKN----------PEA----EEKFKEINEAYQVLSDPEKRKLYDQFG 68
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 34-110 3.22e-07

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 50.53  E-value: 3.22e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNasqlaptesppeiNKHNEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK10767   7 YEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPG-------------DKEAEEKFKEIKEAYEVLSDPQKRAAYDQYG 70
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 34-110 5.98e-07

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 49.99  E-value: 5.98e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNasqlaptesppeiNKHNEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14285   6 YEILGLSKGASKDEIKKAYRKIAIKYHPDKNKG-------------NKEAESIFKEATEAYEVLIDDNKRAQYDRFG 69
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 34-110 8.11e-07

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 49.38  E-value: 8.11e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKmknasqlapteSPPeiNKHNEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14294   7 YEILGVTRDASEEEIKKSYRKLAMKYHPDR-----------NPG--DKEAEELFKEAAEAYEVLSDPKKRGIYDQYG 70
PRK14280 PRK14280
molecular chaperone DnaJ;
34-110 8.67e-07

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 49.33  E-value: 8.67e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDkmknasqlaptesppeINKHN--EEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14280   7 YEVLGVSKSASKDEIKKAYRKLSKKYHPD----------------INKEEgaDEKFKEISEAYEVLSDDQKRAQYDQFG 69
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
33-64 1.01e-06

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 45.56  E-value: 1.01e-06
                        10        20        30
                ....*....|....*....|....*....|..
gi 19114612  33 PYEILELPRTCTANDIKRKYIELVKKHHPDKM 64
Cdd:COG1076   6 AFELLGLPPDADDAELKRAYRKLQREHHPDRL 37
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 33-105 1.26e-06

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 44.61  E-value: 1.26e-06
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 19114612  33 PYEILELPRTCTANDIKRKYIELVKKHHPDKMKNasqlaptesppeiNKHNEEYFRLLLAANALLSDKRRREE 105
Cdd:COG5407   2 PYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKG-------------DPKAEERFKEINEAYELLSDAEKRAR 61
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 34-110 1.62e-06

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 48.45  E-value: 1.62e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNasqlaptesppeiNKHNEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14286   7 YDILGVSKSANDEEIKSAYRKLAIKYHPDKNKG-------------NKESEEKFKEATEAYEILRDPKKRQAYDQFG 70
PRK14295 PRK14295
molecular chaperone DnaJ;
34-107 1.76e-06

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 48.69  E-value: 1.76e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNasqlaptesppeiNKHNEEYFRLLLAANALLSDKRRREEYD 107
Cdd:PRK14295  12 YKVLGVPKDATEAEIKKAYRKLAREYHPDANKG-------------DAKAEERFKEISEAYDVLSDEKKRKEYD 72
PRK14293 PRK14293
molecular chaperone DnaJ;
34-110 2.48e-06

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 48.06  E-value: 2.48e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDkmknasqlaptesppeINKH--NEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14293   6 YEILGVSRDADKDELKRAYRRLARKYHPD----------------VNKEpgAEDRFKEINRAYEVLSDPETRARYDQFG 68
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 34-128 2.92e-06

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 47.63  E-value: 2.92e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNasqlaptespPEInkhnEEYFRLLLAANALLSDKRRREEYDRFGIHW 113
Cdd:PRK14299   7 YAILGVPKNASQDEIKKAFKKLARKYHPDVNKS----------PGA----EEKFKEINEAYTVLSDPEKRRIYDTYGTTA 72

                         90
                 ....*....|....*
gi 19114612  114 NQPSHPTHPSPQNWS 128
Cdd:PRK14299  73 ASAGWQGPPPGPPGG 87
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 34-110 3.19e-06

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 47.92  E-value: 3.19e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQLaptesppeinkhnEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14284   4 YTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEA-------------EKRFKEVSEAYEVLSDAQKRESYDRYG 67
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 34-110 3.56e-06

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 47.58  E-value: 3.56e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQlaptesppeinkhnEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14292   5 YELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGA--------------AEKFAQINEAYAVLSDAEKRAHYDRFG 67
PRK14297 PRK14297
molecular chaperone DnaJ;
34-110 3.75e-06

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 47.47  E-value: 3.75e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNasqlaptesppeiNKHNEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14297   7 YEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKG-------------NKEAEEKFKEINEAYQVLSDPQKKAQYDQFG 70
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 34-110 5.66e-06

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 47.12  E-value: 5.66e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKmknasqlaptesppeinKHNEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PTZ00037  31 YEVLNLSKDCTTSEIKKAYRKLAIKHHPDK-----------------GGDPEKFKEISRAYEVLSDPEKRKIYDEYG 90
PRK14289 PRK14289
molecular chaperone DnaJ;
34-110 1.33e-05

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 45.98  E-value: 1.33e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKmknasqlapteSPPEinKHNEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14289   8 YEVLGVSKTATVDEIKKAYRKKAIQYHPDK-----------NPGD--KEAEEKFKEAAEAYDVLSDPDKRSRYDQFG 71
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 34-110 2.80e-05

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 44.92  E-value: 2.80e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDkmknasqlapteSPPEINKHNEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14290   6 YKILGVDRNASQEDIKKAFRELAKKWHPD------------LHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTG 70
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 34-110 3.28e-05

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 44.43  E-value: 3.28e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDkmknasqLAPTESPpeinkhnEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14283   8 YEVLGVDRNADKKEIKKAYRKLARKYHPD-------VSEEEGA-------EEKFKEISEAYAVLSDDEKRQRYDQFG 70
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 34-110 3.44e-05

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 44.62  E-value: 3.44e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKnasqlaptesppeiNKHNEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14300   6 YQILGVSKTASQADLKKAYLKLAKQYHPDTTD--------------AKDAEKKFKEINAAYDVLKDEQKRAAYDRFG 68
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 34-110 6.10e-05

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 43.92  E-value: 6.10e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDkmknasqlaptesppeINKH--NEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14276   7 YDRLGVSKDASQDEIKKAYRKLSKKYHPD----------------INKEpgAEEKYKEVQEAYETLSDPQKRAAYDQYG 69
PRK14288 PRK14288
molecular chaperone DnaJ;
31-110 7.15e-05

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 43.52  E-value: 7.15e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19114612   31 LTPYEILELPRTCTANDIKRKYIELVKKHHPDkmKNASqlaptesppeiNKHNEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14288   3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPD--RNAG-----------DKEAEEKFKLINEAYGVLSDEKKRALYDRYG 69
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 34-110 1.92e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 42.30  E-value: 1.92e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKnasqlAPTEsppeinkhnEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14287   7 YEVLGVDRNASVDEVKKAYRKLARKYHPDVNK-----APDA---------EDKFKEVKEAYDTLSDPQKKAHYDQFG 69
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 34-110 2.12e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 42.24  E-value: 2.12e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQlaptesppeinkhnEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14296   7 YEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDA--------------HDKMVEINEAADVLLDKDKRKQYDQFG 69
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 34-110 2.53e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 42.04  E-value: 2.53e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNasqlaptesppeiNKHNEEYFRLLLAANALLSDKRRREEYDRFG 110
Cdd:PRK14301   7 YEVLGVSRDASEDEIKKAYRKLALQYHPDRNPD-------------NPEAEQKFKEAAEAYEVLRDAEKRARYDRFG 70
PRK10266 PRK10266
curved DNA-binding protein;
27-116 6.79e-04

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 40.57  E-value: 6.79e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19114612   27 ELKSLtpYEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQlaptesppeinkhnEEYFRLLLAANALLSDKRRREEY 106
Cdd:PRK10266   2 ELKDY--YAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDA--------------EARFKEVAEAWEVLSDEQRRAEY 65

                         90
                 ....*....|
gi 19114612  107 DRFGIHWNQP 116
Cdd:PRK10266  66 DQLWQHRNDP 75
PRK14279 PRK14279
molecular chaperone DnaJ;
34-109 5.04e-03

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 37.79  E-value: 5.04e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 19114612   34 YEILELPRTCTANDIKRKYIELVKKHHPDKmknasqlapteSPPeiNKHNEEYFRLLLAANALLSDKRRREEYDRF 109
Cdd:PRK14279  12 YKELGVSSDASAEEIKKAYRKLARELHPDA-----------NPG--DPAAEERFKAVSEAHDVLSDPAKRKEYDET 74
PHA03102 PHA03102
Small T antigen; Reviewed
 26-63 7.93e-03

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 36.19  E-value: 7.93e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 19114612   26 SELKSLTpyEILELPRTCTAN--DIKRKYIELVKKHHPDK 63
Cdd:PHA03102   2 EESKELM--DLLGLPRSAWGNlpLMRKAYLRKCLEFHPDK 39
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH