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Conserved domains on  [gi|19115390|ref|NP_594478|]
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electron carrier protein [Schizosaccharomyces pombe]

Protein Classification

FMP46 family protein( domain architecture ID 13758)

Found in mitochondrial proteome protein 46 (FMP46) family protein is a DUF1687 domain-containing protein; similar to Schizosaccharomyces pombe mitochondrial redox protein FMP46 which could be involved in the reduction of small toxic molecules

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1687 super family cl06823
Protein of unknown function (DUF1687); This is a putative redox protein which is predicted to ...
 6-105 3.97e-14

Protein of unknown function (DUF1687); This is a putative redox protein which is predicted to have a thioredoxin fold containing a single active cysteine.


The actual alignment was detected with superfamily member pfam07955:

Pssm-ID: 400349  Cd Length: 124  Bit Score: 63.47  E-value: 3.97e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115390     6 TKRILTLFTKKRQ-------TLVEQKLTEYMIAGEKTDnqmlhFKLQVETATPTLDQLNIMLSNIGKDKSDLLVAGAT-S 77
Cdd:pfam07955   7 QPRVITLFHNASSpasnrllQLLKQASANASEKARRSE-----FELEVTEKFPTLDQLKYILSYVGINKIKSILKGAIpN 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 19115390    78 IEDALTKYQHD------------NQLFRRPCLVDWDKGKV 105
Cdd:pfam07955  82 LSEILKKFSEDpefgsplkecvkNGLFNRPLVVDWENGKI 121
 
Name Accession Description Interval E-value
DUF1687 pfam07955
Protein of unknown function (DUF1687); This is a putative redox protein which is predicted to ...
 6-105 3.97e-14

Protein of unknown function (DUF1687); This is a putative redox protein which is predicted to have a thioredoxin fold containing a single active cysteine.


Pssm-ID: 400349  Cd Length: 124  Bit Score: 63.47  E-value: 3.97e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115390     6 TKRILTLFTKKRQ-------TLVEQKLTEYMIAGEKTDnqmlhFKLQVETATPTLDQLNIMLSNIGKDKSDLLVAGAT-S 77
Cdd:pfam07955   7 QPRVITLFHNASSpasnrllQLLKQASANASEKARRSE-----FELEVTEKFPTLDQLKYILSYVGINKIKSILKGAIpN 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 19115390    78 IEDALTKYQHD------------NQLFRRPCLVDWDKGKV 105
Cdd:pfam07955  82 LSEILKKFSEDpefgsplkecvkNGLFNRPLVVDWENGKI 121
 
Name Accession Description Interval E-value
DUF1687 pfam07955
Protein of unknown function (DUF1687); This is a putative redox protein which is predicted to ...
 6-105 3.97e-14

Protein of unknown function (DUF1687); This is a putative redox protein which is predicted to have a thioredoxin fold containing a single active cysteine.


Pssm-ID: 400349  Cd Length: 124  Bit Score: 63.47  E-value: 3.97e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115390     6 TKRILTLFTKKRQ-------TLVEQKLTEYMIAGEKTDnqmlhFKLQVETATPTLDQLNIMLSNIGKDKSDLLVAGAT-S 77
Cdd:pfam07955   7 QPRVITLFHNASSpasnrllQLLKQASANASEKARRSE-----FELEVTEKFPTLDQLKYILSYVGINKIKSILKGAIpN 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 19115390    78 IEDALTKYQHD------------NQLFRRPCLVDWDKGKV 105
Cdd:pfam07955  82 LSEILKKFSEDpefgsplkecvkNGLFNRPLVVDWENGKI 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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