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Conserved domains on  [gi|429239896|ref|NP_595436|]
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uncharacterized protein SPOM_SPBC1709.03 [Schizosaccharomyces pombe]

Protein Classification

DUF3844 domain-containing protein( domain architecture ID 10585471)

DUF3844 domain-containing protein similar to Schizosaccharomyces pombe endoplasmic reticulum membrane protein C1709.03

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3844 pfam12955
Domain of unknown function (DUF3844); This presumed domain is found in fungal species. It ...
 319-418 6.21e-47

Domain of unknown function (DUF3844); This presumed domain is found in fungal species. It contains 8 largely conserved cysteine residues. This domain is found in proteins that are thought to be found in the endoplasmic reticulum.


:

Pssm-ID: 432898  Cd Length: 104  Bit Score: 156.62  E-value: 6.21e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 429239896  319 CYISEEACSKATNDCSGHGRCSKY---GQLDSCYVCQCSNSVVSNAAGQNKTIRWAGESCSKQDISVEFQFFFWFTIIGF 395
Cdd:pfam12955   1 CFTSEDACENATNNCSGHGECVKKyksKSGRDCFACKCKATVVRKGDDGSKTTYWGGPACQKKDVSVPFWLFAGFTVALV 80

                          90       100
                  ....*....|....*....|...
gi 429239896  396 GLLIFSIMLLFSIGQEELANVLT 418
Cdd:pfam12955  81 GLVSGAIGLLFSVGEEELPGVLG 103
 
Name Accession Description Interval E-value
DUF3844 pfam12955
Domain of unknown function (DUF3844); This presumed domain is found in fungal species. It ...
 319-418 6.21e-47

Domain of unknown function (DUF3844); This presumed domain is found in fungal species. It contains 8 largely conserved cysteine residues. This domain is found in proteins that are thought to be found in the endoplasmic reticulum.


Pssm-ID: 432898  Cd Length: 104  Bit Score: 156.62  E-value: 6.21e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 429239896  319 CYISEEACSKATNDCSGHGRCSKY---GQLDSCYVCQCSNSVVSNAAGQNKTIRWAGESCSKQDISVEFQFFFWFTIIGF 395
Cdd:pfam12955   1 CFTSEDACENATNNCSGHGECVKKyksKSGRDCFACKCKATVVRKGDDGSKTTYWGGPACQKKDVSVPFWLFAGFTVALV 80

                          90       100
                  ....*....|....*....|...
gi 429239896  396 GLLIFSIMLLFSIGQEELANVLT 418
Cdd:pfam12955  81 GLVSGAIGLLFSVGEEELPGVLG 103
 
Name Accession Description Interval E-value
DUF3844 pfam12955
Domain of unknown function (DUF3844); This presumed domain is found in fungal species. It ...
 319-418 6.21e-47

Domain of unknown function (DUF3844); This presumed domain is found in fungal species. It contains 8 largely conserved cysteine residues. This domain is found in proteins that are thought to be found in the endoplasmic reticulum.


Pssm-ID: 432898  Cd Length: 104  Bit Score: 156.62  E-value: 6.21e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 429239896  319 CYISEEACSKATNDCSGHGRCSKY---GQLDSCYVCQCSNSVVSNAAGQNKTIRWAGESCSKQDISVEFQFFFWFTIIGF 395
Cdd:pfam12955   1 CFTSEDACENATNNCSGHGECVKKyksKSGRDCFACKCKATVVRKGDDGSKTTYWGGPACQKKDVSVPFWLFAGFTVALV 80

                          90       100
                  ....*....|....*....|...
gi 429239896  396 GLLIFSIMLLFSIGQEELANVLT 418
Cdd:pfam12955  81 GLVSGAIGLLFSVGEEELPGVLG 103
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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