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Conserved domains on  [gi|19112677|ref|NP_595885|]
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acylpeptide hydrolase [Schizosaccharomyces pombe]

Protein Classification

alpha/beta hydrolase family protein( domain architecture ID 11445445)

alpha/beta hydrolase family protein catalyzes the hydrolysis of substrates with different chemical composition or physicochemical properties using a nucleophile-His-acid catalytic triad

CATH:  3.40.50.1820
EC:  3.-.-.-
Gene Ontology:  GO:0016787
PubMed:  12369917

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Peptidase_S9 pfam00326
Prolyl oligopeptidase family;
463-675 3.80e-66

Prolyl oligopeptidase family;


:

Pssm-ID: 459761 [Multi-domain]  Cd Length: 213  Bit Score: 216.71  E-value: 3.80e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677   463 WSTRWNPAVFANAGFIVFALDPTGSTGYGQRFTDSIALDWGGKPYKDIELGVEYIKNHlSYADSEKMVALGASYGGYMIN 542
Cdd:pfam00326   1 PSFSWNAQLLADRGYVVAIANGRGSGGYGEAFHDAGKGDLGQNEFDDFIAAAEYLIEQ-GYTDPDRLAIWGGSYGGYLTG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677   543 WIQGHpLGRQFRALVCHDGVFNTLNTFYNTEELYFSIHDFGGTPWENRVIYERWNPSNFV--NYWATPELVIHSSKDYRL 620
Cdd:pfam00326  80 AALNQ-RPDLFKAAVAHVPVVDWLAYMSDTSLPFTERYMEWGNPWDNEEGYDYLSPYSPAdnVKVYPPLLLIHGLLDDRV 158
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 19112677   621 TESEGIAAFNVLQYKGIPSRLLVFEDENHWVIKPDNSLRWHKEVLSWILHYTKDC 675
Cdd:pfam00326 159 PPWQSLKLVAALQRKGVPFLLLIFPDEGHGIGKPRNKVEEYARELAFLLEYLGGT 213
TolB super family cl43285
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ...
230-352 3.82e-04

Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];


The actual alignment was detected with superfamily member COG0823:

Pssm-ID: 440585 [Multi-domain]  Cd Length: 158  Bit Score: 41.58  E-value: 3.82e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 230 DKLVFVAKDPklnpatqTKTVVYEINLNTRNLKSLSTAKGACSSPRLAKDGNHIAWLEMQTPQYesdqnQIMVYESESGA 309
Cdd:COG0823  43 RRIAFTSDRG-------GGPQIYVVDADGGEPRRLTFGGGYNASPSWSPDGKRLAFVSRSDGRF-----DIYVLDLDGGA 110
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 19112677 310 KKHIARHWDR---SPSSiEWGVF---KGGEPGLFAIAENYGKQILFFVS 352
Cdd:COG0823 111 PRRLTDGPGSpswSPDG-RRIVFssdRGGRPDLYVVDLDGRKRRLTPAS 158
 
Name Accession Description Interval E-value
Peptidase_S9 pfam00326
Prolyl oligopeptidase family;
463-675 3.80e-66

Prolyl oligopeptidase family;


Pssm-ID: 459761 [Multi-domain]  Cd Length: 213  Bit Score: 216.71  E-value: 3.80e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677   463 WSTRWNPAVFANAGFIVFALDPTGSTGYGQRFTDSIALDWGGKPYKDIELGVEYIKNHlSYADSEKMVALGASYGGYMIN 542
Cdd:pfam00326   1 PSFSWNAQLLADRGYVVAIANGRGSGGYGEAFHDAGKGDLGQNEFDDFIAAAEYLIEQ-GYTDPDRLAIWGGSYGGYLTG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677   543 WIQGHpLGRQFRALVCHDGVFNTLNTFYNTEELYFSIHDFGGTPWENRVIYERWNPSNFV--NYWATPELVIHSSKDYRL 620
Cdd:pfam00326  80 AALNQ-RPDLFKAAVAHVPVVDWLAYMSDTSLPFTERYMEWGNPWDNEEGYDYLSPYSPAdnVKVYPPLLLIHGLLDDRV 158
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 19112677   621 TESEGIAAFNVLQYKGIPSRLLVFEDENHWVIKPDNSLRWHKEVLSWILHYTKDC 675
Cdd:pfam00326 159 PPWQSLKLVAALQRKGVPFLLLIFPDEGHGIGKPRNKVEEYARELAFLLEYLGGT 213
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
420-673 1.29e-56

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 192.15  E-value: 1.29e-56
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 420 WFPGTHGHRIHAWIVKPEsfdKSKKYPVAVLIHGGPQGSWtdsWSTRWNPAVFANAGFIVFALDPTGstgYGQRftdsiA 499
Cdd:COG1506   1 TFKSADGTTLPGWLYLPA---DGKKYPVVVYVHGGPGSRD---DSFLPLAQALASRGYAVLAPDYRG---YGES-----A 66
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 500 LDWGGKPYKDIELGVEYIKNHlSYADSEKMVALGASYGGYMINWIQG-HPlgRQFRALVCHDGVFNtLNTFYNTEELYFS 578
Cdd:COG1506  67 GDWGGDEVDDVLAAIDYLAAR-PYVDPDRIGIYGHSYGGYMALLAAArHP--DRFKAAVALAGVSD-LRSYYGTTREYTE 142
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 579 IhdFGGTPWENRVIYERWNPSNFVNYWATPELVIHSSKDYRLTESEGIAAFNVLQYKGIPSRLLVFEDENHWVIKPDNsL 658
Cdd:COG1506 143 R--LMGGPWEDPEAYAARSPLAYADKLKTPLLLIHGEADDRVPPEQAERLYEALKKAGKPVELLVYPGEGHGFSGAGA-P 219
                       250
                ....*....|....*
gi 19112677 659 RWHKEVLSWILHYTK 673
Cdd:COG1506 220 DYLERILDFLDRHLK 234
TolB COG0823
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ...
230-352 3.82e-04

Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440585 [Multi-domain]  Cd Length: 158  Bit Score: 41.58  E-value: 3.82e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 230 DKLVFVAKDPklnpatqTKTVVYEINLNTRNLKSLSTAKGACSSPRLAKDGNHIAWLEMQTPQYesdqnQIMVYESESGA 309
Cdd:COG0823  43 RRIAFTSDRG-------GGPQIYVVDADGGEPRRLTFGGGYNASPSWSPDGKRLAFVSRSDGRF-----DIYVLDLDGGA 110
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 19112677 310 KKHIARHWDR---SPSSiEWGVF---KGGEPGLFAIAENYGKQILFFVS 352
Cdd:COG0823 111 PRRLTDGPGSpswSPDG-RRIVFssdRGGRPDLYVVDLDGRKRRLTPAS 158
 
Name Accession Description Interval E-value
Peptidase_S9 pfam00326
Prolyl oligopeptidase family;
463-675 3.80e-66

Prolyl oligopeptidase family;


Pssm-ID: 459761 [Multi-domain]  Cd Length: 213  Bit Score: 216.71  E-value: 3.80e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677   463 WSTRWNPAVFANAGFIVFALDPTGSTGYGQRFTDSIALDWGGKPYKDIELGVEYIKNHlSYADSEKMVALGASYGGYMIN 542
Cdd:pfam00326   1 PSFSWNAQLLADRGYVVAIANGRGSGGYGEAFHDAGKGDLGQNEFDDFIAAAEYLIEQ-GYTDPDRLAIWGGSYGGYLTG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677   543 WIQGHpLGRQFRALVCHDGVFNTLNTFYNTEELYFSIHDFGGTPWENRVIYERWNPSNFV--NYWATPELVIHSSKDYRL 620
Cdd:pfam00326  80 AALNQ-RPDLFKAAVAHVPVVDWLAYMSDTSLPFTERYMEWGNPWDNEEGYDYLSPYSPAdnVKVYPPLLLIHGLLDDRV 158
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 19112677   621 TESEGIAAFNVLQYKGIPSRLLVFEDENHWVIKPDNSLRWHKEVLSWILHYTKDC 675
Cdd:pfam00326 159 PPWQSLKLVAALQRKGVPFLLLIFPDEGHGIGKPRNKVEEYARELAFLLEYLGGT 213
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
420-673 1.29e-56

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 192.15  E-value: 1.29e-56
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 420 WFPGTHGHRIHAWIVKPEsfdKSKKYPVAVLIHGGPQGSWtdsWSTRWNPAVFANAGFIVFALDPTGstgYGQRftdsiA 499
Cdd:COG1506   1 TFKSADGTTLPGWLYLPA---DGKKYPVVVYVHGGPGSRD---DSFLPLAQALASRGYAVLAPDYRG---YGES-----A 66
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 500 LDWGGKPYKDIELGVEYIKNHlSYADSEKMVALGASYGGYMINWIQG-HPlgRQFRALVCHDGVFNtLNTFYNTEELYFS 578
Cdd:COG1506  67 GDWGGDEVDDVLAAIDYLAAR-PYVDPDRIGIYGHSYGGYMALLAAArHP--DRFKAAVALAGVSD-LRSYYGTTREYTE 142
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 579 IhdFGGTPWENRVIYERWNPSNFVNYWATPELVIHSSKDYRLTESEGIAAFNVLQYKGIPSRLLVFEDENHWVIKPDNsL 658
Cdd:COG1506 143 R--LMGGPWEDPEAYAARSPLAYADKLKTPLLLIHGEADDRVPPEQAERLYEALKKAGKPVELLVYPGEGHGFSGAGA-P 219
                       250
                ....*....|....*
gi 19112677 659 RWHKEVLSWILHYTK 673
Cdd:COG1506 220 DYLERILDFLDRHLK 234
FrsA COG1073
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ...
416-617 9.94e-14

Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];


Pssm-ID: 440691 [Multi-domain]  Cd Length: 253  Bit Score: 71.48  E-value: 9.94e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 416 YEEIWFPGTHGHRIHAWIVKPEsfDKSKKYPVAVLIHG-GPQGSWTDSWSTRwnpavFANAGFIVFALDPTGstgYGQrf 494
Cdd:COG1073  10 KEDVTFKSRDGIKLAGDLYLPA--GASKKYPAVVVAHGnGGVKEQRALYAQR-----LAELGFNVLAFDYRG---YGE-- 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 495 tdSialdwGGKP-------YKDIELGVEYIKNHLsYADSEKMVALGASYGG-YMINWIQGHPlgrQFRALVChDGVFNTL 566
Cdd:COG1073  78 --S-----EGEPreegspeRRDARAAVDYLRTLP-GVDPERIGLLGISLGGgYALNAAATDP---RVKAVIL-DSPFTSL 145
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 19112677 567 NTFYNTEELYFSIHDFGGTPWENRVIYE-----RWNPSNFVNYWATPELVIHSSKD 617
Cdd:COG1073 146 EDLAAQRAKEARGAYLPGVPYLPNVRLAsllndEFDPLAKIEKISRPLLFIHGEKD 201
PldB COG2267
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
417-668 6.98e-12

Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];


Pssm-ID: 441868 [Multi-domain]  Cd Length: 221  Bit Score: 65.41  E-value: 6.98e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 417 EEIWFPGTHGHRIHAWIVKPESFDKskkyPVAVLIHGgpqgsWTDSwSTRWNPAV--FANAGFIVFALD------PTGST 488
Cdd:COG2267   4 RLVTLPTRDGLRLRGRRWRPAGSPR----GTVVLVHG-----LGEH-SGRYAELAeaLAAAGYAVLAFDlrghgrSDGPR 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 489 GYGQRFTDSIAldwggkpykDIELGVEYIKNHlsyaDSEKMVALGASYGGYM-INWIQGHPlgRQFRALVChdgvfntLN 567
Cdd:COG2267  74 GHVDSFDDYVD---------DLRAALDALRAR----PGLPVVLLGHSMGGLIaLLYAARYP--DRVAGLVL-------LA 131
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 568 TFYNTEELYFSIHDFggtpwenrviYERWNPSNFVNYWATPELVIHSSKDyRLTESEGIAAFnvlqYKGIPS--RLLVFE 645
Cdd:COG2267 132 PAYRADPLLGPSARW----------LRALRLAEALARIDVPVLVLHGGAD-RVVPPEAARRL----AARLSPdvELVLLP 196
                       250       260
                ....*....|....*....|...
gi 19112677 646 DENHWVIKPDNSLRWHKEVLSWI 668
Cdd:COG2267 197 GARHELLNEPAREEVLAAILAWL 219
DLH COG0412
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];
417-649 4.39e-10

Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440181 [Multi-domain]  Cd Length: 226  Bit Score: 60.37  E-value: 4.39e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 417 EEIWFPGTHGHRIHAWIVKPESfdkSKKYPVAVLIHGgpqgswtdSWS-TRWNPAV---FANAGFIVFALD---PTGSTG 489
Cdd:COG0412   4 ETVTIPTPDGVTLPGYLARPAG---GGPRPGVVVLHE--------IFGlNPHIRDVarrLAAAGYVVLAPDlygRGGPGD 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 490 YGQRFTDSIALDWGGKPYKDIELGVEYIKNHlSYADSEKMVALGASYGGYMINWIQGHplGRQFRALVChdgvfntlntf 569
Cdd:COG0412  73 DPDEARALMGALDPELLAADLRAALDWLKAQ-PEVDAGRVGVVGFCFGGGLALLAAAR--GPDLAAAVS----------- 138
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 570 ynteelyfsihdFGGTPWENRVIYERWNPsnfvnywATPELVIHSSKDYRLTESEGIAAFNVLQYKGIPSRLLVFEDENH 649
Cdd:COG0412 139 ------------FYGGLPADDLLDLAARI-------KAPVLLLYGEKDPLVPPEQVAALEAALAAAGVDVELHVYPGAGH 199
Axe1 COG3458
Cephalosporin-C deacetylase or related acetyl esterase [Secondary metabolites biosynthesis, ...
419-538 2.39e-08

Cephalosporin-C deacetylase or related acetyl esterase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442681 [Multi-domain]  Cd Length: 318  Bit Score: 56.35  E-value: 2.39e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 419 IWFPGTHGHRIHAWIVKPEsfdKSKKYPVAVLIHG--GPQGSWtdSWSTRWnpavfANAGFIVFALDPTG---STGYGQ- 492
Cdd:COG3458  59 VTFTGFGGARIYGWLLRPK---GEGPLPAVVEFHGygGGRGLP--HEDLDW-----AAAGYAVLVMDTRGqgsSWGDTPd 128
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 493 -RFTDSIALDW----G---------GKPYKDIELGVEYIKNhLSYADSEKMVALGASYGG 538
Cdd:COG3458 129 pGGYSGGALPGymtrGiddpdtyyyRRVYLDAVRAVDALRS-LPEVDGKRIGVTGGSQGG 187
AXE1 pfam05448
Acetyl xylan esterase (AXE1); This family consists of several bacterial acetyl xylan esterase ...
397-538 4.62e-08

Acetyl xylan esterase (AXE1); This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan.


Pssm-ID: 398876 [Multi-domain]  Cd Length: 316  Bit Score: 55.48  E-value: 4.62e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677   397 ETLNESVLLENNVGLSPTSYE-------EIWFPGTHGHRIHAWIVKPESfdKSKKYPVAVLIHG--GPQGSWTDSWStrw 467
Cdd:pfam05448  29 GELAELRKVDPDLELEPVDFHlptvecyDLTFEGFGGARIYAWYVVPKE--SEEKHPAVVHFHGynGRRGDWHDMLH--- 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677   468 npavFANAGFIVFALDPTGSTGYGQ----RFTDSIALDWGGKP------------YKDIELGVEYIKNHlSYADSEKMVA 531
Cdd:pfam05448 104 ----WAAHGYAVFVMDVRGQGGLSEddprGPKGNTYKGHITRGlldretyyyrrvFLDAVRAVEIVMSF-PEVDEERIVV 178

                  ....*..
gi 19112677   532 LGASYGG 538
Cdd:pfam05448 179 TGGSQGG 185
MenH COG0596
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ...
424-651 6.89e-06

2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440361 [Multi-domain]  Cd Length: 221  Bit Score: 47.69  E-value: 6.89e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 424 THGHRIHAWIVKPESfdkskkyPVAVLIHGGPQGSWTdswstrWNPAVFA-NAGFIVFALDPtgsTGYGQRftdsialDW 502
Cdd:COG0596   9 VDGVRLHYREAGPDG-------PPVVLLHGLPGSSYE------WRPLIPAlAAGYRVIAPDL---RGHGRS-------DK 65
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 503 GGKPYkDIELGVEYIKNHLSYADSEKMVALGASYGGYMI-NWIQGHPlgRQFRALVCHDGVFntlntfyntEELYFSIHD 581
Cdd:COG0596  66 PAGGY-TLDDLADDLAALLDALGLERVVLVGHSMGGMVAlELAARHP--ERVAGLVLVDEVL---------AALAEPLRR 133
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 19112677 582 FGGTPWENRVIYERWNPSNFVNYWA---TPELVIHSSKDyRLTESEGIAAFnvlqYKGIP-SRLLVFEDENHWV 651
Cdd:COG0596 134 PGLAPEALAALLRALARTDLRERLAritVPTLVIWGEKD-PIVPPALARRL----AELLPnAELVVLPGAGHFP 202
Fes COG2382
Enterochelin esterase or related enzyme [Inorganic ion transport and metabolism];
417-650 1.04e-05

Enterochelin esterase or related enzyme [Inorganic ion transport and metabolism];


Pssm-ID: 441948 [Multi-domain]  Cd Length: 314  Bit Score: 47.93  E-value: 1.04e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 417 EEIWFPGTH-GHRIHAWIVKPESFDKS-KKYPVAVLIHGGPQGSWtdSWSTRWN-PAVFAN---AG----FIVFALDPTG 486
Cdd:COG2382  82 ETVTYPSKAlGRTRRVWVYLPPGYDNPgKKYPVLYLLDGGGGDEQ--DWFDQGRlPTILDNliaAGkippMIVVMPDGGD 159
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 487 StgyGQRFTDSIAldwGGKPYKDI--ELgVEYIKNHLS-YADSEKMVALGASYGGY---MINWiqGHPlgRQFRALVCHD 560
Cdd:COG2382 160 G---GDRGTEGPG---NDAFERFLaeEL-IPFVEKNYRvSADPEHRAIAGLSMGGLaalYAAL--RHP--DLFGYVGSFS 228
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 561 GVFNTlntfynteelyfsiHDFGGTPWENRVIYERWNPSNFVNYWatpelVIHSSKDYRLTESEGIAAfnVLQYKGIPSR 640
Cdd:COG2382 229 GSFWW--------------PPGDADRGGWAELLAAGAPKKPLRFY-----LDVGTEDDLLEANRALAA--ALKAKGYDVE 287
                       250
                ....*....|...
gi 19112677 641 LLVFE---DENHW 650
Cdd:COG2382 288 YREFPgghDWAVW 300
TolB COG0823
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ...
230-352 3.82e-04

Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440585 [Multi-domain]  Cd Length: 158  Bit Score: 41.58  E-value: 3.82e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 230 DKLVFVAKDPklnpatqTKTVVYEINLNTRNLKSLSTAKGACSSPRLAKDGNHIAWLEMQTPQYesdqnQIMVYESESGA 309
Cdd:COG0823  43 RRIAFTSDRG-------GGPQIYVVDADGGEPRRLTFGGGYNASPSWSPDGKRLAFVSRSDGRF-----DIYVLDLDGGA 110
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 19112677 310 KKHIARHWDR---SPSSiEWGVF---KGGEPGLFAIAENYGKQILFFVS 352
Cdd:COG0823 111 PRRLTDGPGSpswSPDG-RRIVFssdRGGRPDLYVVDLDGRKRRLTPAS 158
TolB COG0823
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ...
251-322 3.32e-03

Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440585 [Multi-domain]  Cd Length: 158  Bit Score: 38.88  E-value: 3.32e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19112677 251 VYEINLNTRNLKSLSTAKGACSSPRLAKDGNHIAwlemqtpqYESDQN---QIMVYESESGAKKHI--ARHWDRSPS 322
Cdd:COG0823  13 IYVVDLDGGEPRRLTNSPGIDTSPAWSPDGRRIA--------FTSDRGggpQIYVVDADGGEPRRLtfGGGYNASPS 81
Aes COG0657
Acetyl esterase/lipase [Lipid transport and metabolism];
433-668 4.90e-03

Acetyl esterase/lipase [Lipid transport and metabolism];


Pssm-ID: 440422 [Multi-domain]  Cd Length: 207  Bit Score: 39.09  E-value: 4.90e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 433 IVKPEsfDKSKKYPVAVLIHGGpqgSWT--DSWSTRWNPAVFAN-AGFIVFALD----PTGstgygqRFTDsiALDwggk 505
Cdd:COG0657   3 VYRPA--GAKGPLPVVVYFHGG---GWVsgSKDTHDPLARRLAArAGAAVVSVDyrlaPEH------PFPA--ALE---- 65
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 506 pykDIELGVEYIKNHLSY--ADSEKMVALGASYGGYMINWI---QGHPLGRQFRALVCHDGVFNtlntfynteeLYFSI- 579
Cdd:COG0657  66 ---DAYAALRWLRANAAElgIDPDRIAVAGDSAGGHLAAALalrARDRGGPRPAAQVLIYPVLD----------LTASPl 132
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 580 -HDFGGTPwenrviyerwnpsnfvnywatPELVIHSSKDYRLTESEGIAAfnVLQYKGIPSRLLVFEDENH-WVIKP--D 655
Cdd:COG0657 133 rADLAGLP---------------------PTLIVTGEADPLVDESEALAA--ALRAAGVPVELHVYPGGGHgFGLLAglP 189
                       250
                ....*....|...
gi 19112677 656 NSLRWHKEVLSWI 668
Cdd:COG0657 190 EARAALAEIAAFL 202
COG4188 COG4188
Predicted dienelactone hydrolase [General function prediction only];
408-539 5.38e-03

Predicted dienelactone hydrolase [General function prediction only];


Pssm-ID: 443342 [Multi-domain]  Cd Length: 326  Bit Score: 39.71  E-value: 5.38e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112677 408 NVGLSPTSYEEIWFPGTHGHR-IHAWIVKPESFDK----SKKYPVAVLIHGGPqGSWTD--SWSTRWnpavfANAGFIVF 480
Cdd:COG4188  20 QPGPFAVGVQTLTLRDPSRDRpLPVDVWYPATAPAdapaGGPFPLVVLSHGLG-GSREGyaYLAEHL-----ASHGYVVA 93
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 19112677 481 ALDPTGSTGYG-QRFTDSIALDWGGKPYKD--------------IELGVEYIKNHLsyaDSEKMVALGASYGGY 539
Cdd:COG4188  94 APDHPGSNAADlSAALDGLADALDPEELWErpldlsfvldqllaLNKSDPPLAGRL---DLDRIGVIGHSLGGY 164
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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