NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|19113149|ref|NP_596357|]
View 

protein Mic19 [Schizosaccharomyces pombe]

Protein Classification

Mic19 family protein( domain architecture ID 11344)

Mic19 family protein is a DUF1690 domain-containing protein; similar to Schizosaccharomyces pombe MICOS complex subunit mic19, which is a component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF1690 super family cl06824
Protein of Unknown function (DUF1690); Family of uncharacterized fungal proteins.
 10-147 3.06e-20

Protein of Unknown function (DUF1690); Family of uncharacterized fungal proteins.


The actual alignment was detected with superfamily member pfam07956:

Pssm-ID: 429752  Cd Length: 138  Bit Score: 81.11  E-value: 3.06e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113149    10 FVLRAPTEFSEKFVRHLQESTETDTSRYMDMENYIQKRVQDELKQLQLRQKKAIDAIQEEEWKSNAKTiKDSQGSLDSNL 89
Cdd:pfam07956   1 FTPETPVDFSQDLVSQLESSTETDYSRAQLLELYIQARVAEELKRLQAEEEEALKKFEDKLEKSLLDD-DDAGDGLSSAA 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 19113149    90 LSAEFRSFQEKLEKqssiNDKELKIKL-KEVESIRSDLLKCMSEHPDKSLICHPLAEKF 147
Cdd:pfam07956  80 LNEKIEELRKKLEE----FRKRVRLKLpEEVEAAREAVVRCLRENKGRPLDCWEEVEAF 134
 
Name Accession Description Interval E-value
DUF1690 pfam07956
Protein of Unknown function (DUF1690); Family of uncharacterized fungal proteins.
 10-147 3.06e-20

Protein of Unknown function (DUF1690); Family of uncharacterized fungal proteins.


Pssm-ID: 429752  Cd Length: 138  Bit Score: 81.11  E-value: 3.06e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113149    10 FVLRAPTEFSEKFVRHLQESTETDTSRYMDMENYIQKRVQDELKQLQLRQKKAIDAIQEEEWKSNAKTiKDSQGSLDSNL 89
Cdd:pfam07956   1 FTPETPVDFSQDLVSQLESSTETDYSRAQLLELYIQARVAEELKRLQAEEEEALKKFEDKLEKSLLDD-DDAGDGLSSAA 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 19113149    90 LSAEFRSFQEKLEKqssiNDKELKIKL-KEVESIRSDLLKCMSEHPDKSLICHPLAEKF 147
Cdd:pfam07956  80 LNEKIEELRKKLEE----FRKRVRLKLpEEVEAAREAVVRCLRENKGRPLDCWEEVEAF 134
 
Name Accession Description Interval E-value
DUF1690 pfam07956
Protein of Unknown function (DUF1690); Family of uncharacterized fungal proteins.
 10-147 3.06e-20

Protein of Unknown function (DUF1690); Family of uncharacterized fungal proteins.


Pssm-ID: 429752  Cd Length: 138  Bit Score: 81.11  E-value: 3.06e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113149    10 FVLRAPTEFSEKFVRHLQESTETDTSRYMDMENYIQKRVQDELKQLQLRQKKAIDAIQEEEWKSNAKTiKDSQGSLDSNL 89
Cdd:pfam07956   1 FTPETPVDFSQDLVSQLESSTETDYSRAQLLELYIQARVAEELKRLQAEEEEALKKFEDKLEKSLLDD-DDAGDGLSSAA 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 19113149    90 LSAEFRSFQEKLEKqssiNDKELKIKL-KEVESIRSDLLKCMSEHPDKSLICHPLAEKF 147
Cdd:pfam07956  80 LNEKIEELRKKLEE----FRKRVRLKLpEEVEAAREAVVRCLRENKGRPLDCWEEVEAF 134
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH