NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|162312325|ref|NP_596769|]
View 

APC amino acid transporter [Schizosaccharomyces pombe]

Protein Classification

APC family permease( domain architecture ID 1903533)

APC (amino acid/polyamine/organocation) family permease is involved in the uptake of a specific amino acid and/or polyamine substrate with the concomitant import of a proton

Gene Ontology:  GO:0055085|GO:0022857
TCDB:  2.A.3

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
AA_permease_2 super family cl45918
Amino acid permease;
69-532 2.87e-155

Amino acid permease;


The actual alignment was detected with superfamily member TIGR00913:

Pssm-ID: 459263  Cd Length: 478  Bit Score: 454.05  E-value: 2.87e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325   69 LKPRHLQMIAIGSCIGTGLFVSTGKSLKNAGPGSLMINFIILSAMILALILSLGEMCCFLPNQS-SITMYTGRLLNNNIG 147
Cdd:TIGR00913   4 LKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVVSgSFATYASRFVDPAFG 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  148 FAQSWLYFWIWLTVLPSEISAACEVVDFWTTQhLNPAIWVTIFLAYVVLVNAFGARSYGECEFVSSFLKVVIVIIFFFVA 227
Cdd:TIGR00913  84 FAVGWNYWLQWLIVLPLELVTASMTIQYWTDK-VNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFIILS 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  228 IIINCGAAPKGGYIGAHYWHHPGSFRNG-----FKGFCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKKVFYRMG 302
Cdd:TIGR00913 163 IILNCGGGPNHGYIGFRYWHDPGAFAGGtiggrFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWRIL 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  303 FFYIITIFLITLVVPYDNPDLGN--------VSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALVKQ 374
Cdd:TIGR00913 243 VFYILTLFLIGFLVPYNDPRLLSsssssdsaASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYALAHQ 322
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  375 GWAPRFLGRVDQKGRPVISYLCSLAMACIAYVNAAPDGSVVFDWLMSVSGGGAFVIWGLSFIDHIRLRYAMKAQKIPDTV 454
Cdd:TIGR00913 323 GLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQGRSLDE 402
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 162312325  455 LPYKFPGSVYLSYYGVLINFLALCALVYISIFPVtheKPSAYGFFVSFLG-PSVFIAYLLISPIFVKPTFQSLKDVDLT 532
Cdd:TIGR00913 403 LPYKSQTGPYGSYYALFFNILILIAQGYVAFAPV---KFSAKSFFEAYLSlPIFIALYIGHKVYKRDKLIIKLDDIDLD 478
 
Name Accession Description Interval E-value
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
69-532 2.87e-155

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 454.05  E-value: 2.87e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325   69 LKPRHLQMIAIGSCIGTGLFVSTGKSLKNAGPGSLMINFIILSAMILALILSLGEMCCFLPNQS-SITMYTGRLLNNNIG 147
Cdd:TIGR00913   4 LKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVVSgSFATYASRFVDPAFG 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  148 FAQSWLYFWIWLTVLPSEISAACEVVDFWTTQhLNPAIWVTIFLAYVVLVNAFGARSYGECEFVSSFLKVVIVIIFFFVA 227
Cdd:TIGR00913  84 FAVGWNYWLQWLIVLPLELVTASMTIQYWTDK-VNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFIILS 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  228 IIINCGAAPKGGYIGAHYWHHPGSFRNG-----FKGFCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKKVFYRMG 302
Cdd:TIGR00913 163 IILNCGGGPNHGYIGFRYWHDPGAFAGGtiggrFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWRIL 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  303 FFYIITIFLITLVVPYDNPDLGN--------VSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALVKQ 374
Cdd:TIGR00913 243 VFYILTLFLIGFLVPYNDPRLLSsssssdsaASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYALAHQ 322
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  375 GWAPRFLGRVDQKGRPVISYLCSLAMACIAYVNAAPDGSVVFDWLMSVSGGGAFVIWGLSFIDHIRLRYAMKAQKIPDTV 454
Cdd:TIGR00913 323 GLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQGRSLDE 402
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 162312325  455 LPYKFPGSVYLSYYGVLINFLALCALVYISIFPVtheKPSAYGFFVSFLG-PSVFIAYLLISPIFVKPTFQSLKDVDLT 532
Cdd:TIGR00913 403 LPYKSQTGPYGSYYALFFNILILIAQGYVAFAPV---KFSAKSFFEAYLSlPIFIALYIGHKVYKRDKLIIKLDDIDLD 478
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
69-533 2.17e-101

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 315.19  E-value: 2.17e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  69 LKPRHLQMIAIGSCIGTGLFVSTGKSLKNAGPGSLMINFIILSAMILALILSLGEMCCFLPNQSSITMYTGRLLNNNIGF 148
Cdd:COG0833   14 LKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYATRFIDPAFGF 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 149 AQSWLYFWIWLTVLPSEISAACEVVDFWTTqHLNPAIWVTIFLAYVVLVNAFGARSYGECEFVSSFLKVVIVIIFFFVAI 228
Cdd:COG0833   94 AVGWNYWLNWAITVAAELTAAGIIMQYWFP-DVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKVITVIAFIIVGL 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 229 IINCGAAPkGGYIGAHYWHHPGS-FRNGFKGFCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKKVFYRMGFFYII 307
Cdd:COG0833  173 LMIFGIIG-GHAPGFSNFTTGDGpFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAIRQVFWRILLFYIL 251
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 308 TIFLITLVVPYDNPDLgNVSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALVKQGWAPRFLGRVDQK 387
Cdd:COG0833  252 AIFVIAALIPYTDAGV-AESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLWSLAKEGMAPKIFAKLNKR 330
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 388 GRPVISYLCSLAMACIAYVNAAPDGSVVFDWLMSVSGGGAFVIWGLSFIDHIRLRYAMKAQKIPDTVLPYKFPGSVYLSY 467
Cdd:COG0833  331 GVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAYVAQGGDLEDLKYKAPLFPFGPI 410
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 162312325 468 YGvlinfLALCALVYISIFpvthekPSAYGFFVSFLGPSVFIAYLLISPIFVKPTFQSLKDVDLTT 533
Cdd:COG0833  411 FA-----FILCLIVIIGQA------FDPEQRIALYIGIPFFLACYLGYKLKKKTKLVPLEEMDLSP 465
AA_permease pfam00324
Amino acid permease;
73-520 4.84e-98

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 306.55  E-value: 4.84e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325   73 HLQMIAIGSCIGTGLFVSTGKSLKNAGPGSLMINFIILSAMILALILSLGEMCCFLPNQSSITMYTGRLLNNNIGFAQSW 152
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  153 LYFWIWLTVLPSEISAACEVVDFWTTQHLNPAIWVT--IFLAYVVLVNAFGARSYGECEFVSSFLKVVIVIIFFFVAIII 230
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWELVPDIPYLWVWgaVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  231 NCGAAPKGGYIGAHYWHHPGS--FRNGF-KGFCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKKVFYRMGFFYII 307
Cdd:pfam00324 161 LSGGNPNDGAIFRYLGDNGGKnnFPPGFgKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYIL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  308 TIFLITLVVPYDNPDLGN-----VSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALVKQGWAPRFLG 382
Cdd:pfam00324 241 SLLAIGLLVPWNDPGLLNdsasaASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFLK 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  383 RVDQKGRPVISYLCSLAMACIAYVNAAPDGSVVFDWLMSVSGGGAFVIWGLSFIDHIRLRYAMKAQKIPDTVLPYKFPGS 462
Cdd:pfam00324 321 KVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDELPFKAPLG 400
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  463 VYLSYYGVLIN--FLALCALVYISIFPVTHEKPSAYGFFVSFLGPSVFIAYLLISPIFVK 520
Cdd:pfam00324 401 PLGVILGLAAIiiILIIQFLYAFLPVPGGPKNWGAGSFAAAYLIVLLFLIILIGVKLHVK 460
PRK10836 PRK10836
lysine transporter; Provisional
69-460 4.80e-70

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 234.33  E-value: 4.80e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  69 LKPRHLQMIAIGSCIGTGLFVSTGKSLKNAGPGSLMINFIILSAMILALILSLGEMCCFLPNQSSITMYTGRLLNNNIGF 148
Cdd:PRK10836  17 LKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGF 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 149 AQSWLYFWIWLTVLPSEISAACEVVDFWTTQhlNPA-IWVTIFLAYVVLVNAFGARSYGECEFVSSFLKVVIVIIFFFVA 227
Cdd:PRK10836  97 ALGWNYWYNWAVTIAVDLVAAQLVMSWWFPD--TPGwIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFIIVG 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 228 IIINCGAAPKGGYIGAHYWH-HPGSFRNGFKGFCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKKVFYRMGFFYI 306
Cdd:PRK10836 175 VLMIIGIFKGAEPAGWSNWTiGDAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQVFWRILLFYV 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 307 ITIFLITLVVPYDNPDLG-------NVSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALVKQGWAPR 379
Cdd:PRK10836 255 FAILIISLIIPYTDPSLLrndvkdiSVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPR 334
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 380 FLGRVDQKGRPVISYLCSLAMACIAYVNAAPDGSVVFDWLMSVSGGGAFVIWGLSFIDHIRLRYAMKAQKIPDTVLPYK- 458
Cdd:PRK10836 335 IFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVLQGHDLNDLPYRs 414

                 ....
gi 162312325 459 --FP 460
Cdd:PRK10836 415 gfFP 418
 
Name Accession Description Interval E-value
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
69-532 2.87e-155

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 454.05  E-value: 2.87e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325   69 LKPRHLQMIAIGSCIGTGLFVSTGKSLKNAGPGSLMINFIILSAMILALILSLGEMCCFLPNQS-SITMYTGRLLNNNIG 147
Cdd:TIGR00913   4 LKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVVSgSFATYASRFVDPAFG 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  148 FAQSWLYFWIWLTVLPSEISAACEVVDFWTTQhLNPAIWVTIFLAYVVLVNAFGARSYGECEFVSSFLKVVIVIIFFFVA 227
Cdd:TIGR00913  84 FAVGWNYWLQWLIVLPLELVTASMTIQYWTDK-VNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFIILS 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  228 IIINCGAAPKGGYIGAHYWHHPGSFRNG-----FKGFCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKKVFYRMG 302
Cdd:TIGR00913 163 IILNCGGGPNHGYIGFRYWHDPGAFAGGtiggrFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWRIL 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  303 FFYIITIFLITLVVPYDNPDLGN--------VSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALVKQ 374
Cdd:TIGR00913 243 VFYILTLFLIGFLVPYNDPRLLSsssssdsaASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYALAHQ 322
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  375 GWAPRFLGRVDQKGRPVISYLCSLAMACIAYVNAAPDGSVVFDWLMSVSGGGAFVIWGLSFIDHIRLRYAMKAQKIPDTV 454
Cdd:TIGR00913 323 GLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQGRSLDE 402
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 162312325  455 LPYKFPGSVYLSYYGVLINFLALCALVYISIFPVtheKPSAYGFFVSFLG-PSVFIAYLLISPIFVKPTFQSLKDVDLT 532
Cdd:TIGR00913 403 LPYKSQTGPYGSYYALFFNILILIAQGYVAFAPV---KFSAKSFFEAYLSlPIFIALYIGHKVYKRDKLIIKLDDIDLD 478
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
69-533 2.17e-101

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 315.19  E-value: 2.17e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  69 LKPRHLQMIAIGSCIGTGLFVSTGKSLKNAGPGSLMINFIILSAMILALILSLGEMCCFLPNQSSITMYTGRLLNNNIGF 148
Cdd:COG0833   14 LKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYATRFIDPAFGF 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 149 AQSWLYFWIWLTVLPSEISAACEVVDFWTTqHLNPAIWVTIFLAYVVLVNAFGARSYGECEFVSSFLKVVIVIIFFFVAI 228
Cdd:COG0833   94 AVGWNYWLNWAITVAAELTAAGIIMQYWFP-DVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKVITVIAFIIVGL 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 229 IINCGAAPkGGYIGAHYWHHPGS-FRNGFKGFCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKKVFYRMGFFYII 307
Cdd:COG0833  173 LMIFGIIG-GHAPGFSNFTTGDGpFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAIRQVFWRILLFYIL 251
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 308 TIFLITLVVPYDNPDLgNVSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALVKQGWAPRFLGRVDQK 387
Cdd:COG0833  252 AIFVIAALIPYTDAGV-AESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLWSLAKEGMAPKIFAKLNKR 330
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 388 GRPVISYLCSLAMACIAYVNAAPDGSVVFDWLMSVSGGGAFVIWGLSFIDHIRLRYAMKAQKIPDTVLPYKFPGSVYLSY 467
Cdd:COG0833  331 GVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAYVAQGGDLEDLKYKAPLFPFGPI 410
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 162312325 468 YGvlinfLALCALVYISIFpvthekPSAYGFFVSFLGPSVFIAYLLISPIFVKPTFQSLKDVDLTT 533
Cdd:COG0833  411 FA-----FILCLIVIIGQA------FDPEQRIALYIGIPFFLACYLGYKLKKKTKLVPLEEMDLSP 465
AA_permease pfam00324
Amino acid permease;
73-520 4.84e-98

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 306.55  E-value: 4.84e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325   73 HLQMIAIGSCIGTGLFVSTGKSLKNAGPGSLMINFIILSAMILALILSLGEMCCFLPNQSSITMYTGRLLNNNIGFAQSW 152
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  153 LYFWIWLTVLPSEISAACEVVDFWTTQHLNPAIWVT--IFLAYVVLVNAFGARSYGECEFVSSFLKVVIVIIFFFVAIII 230
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWELVPDIPYLWVWgaVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  231 NCGAAPKGGYIGAHYWHHPGS--FRNGF-KGFCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKKVFYRMGFFYII 307
Cdd:pfam00324 161 LSGGNPNDGAIFRYLGDNGGKnnFPPGFgKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYIL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  308 TIFLITLVVPYDNPDLGN-----VSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALVKQGWAPRFLG 382
Cdd:pfam00324 241 SLLAIGLLVPWNDPGLLNdsasaASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFLK 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  383 RVDQKGRPVISYLCSLAMACIAYVNAAPDGSVVFDWLMSVSGGGAFVIWGLSFIDHIRLRYAMKAQKIPDTVLPYKFPGS 462
Cdd:pfam00324 321 KVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDELPFKAPLG 400
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  463 VYLSYYGVLIN--FLALCALVYISIFPVTHEKPSAYGFFVSFLGPSVFIAYLLISPIFVK 520
Cdd:pfam00324 401 PLGVILGLAAIiiILIIQFLYAFLPVPGGPKNWGAGSFAAAYLIVLLFLIILIGVKLHVK 460
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
69-513 1.51e-89

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 284.32  E-value: 1.51e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  69 LKPRHLQMIAIGSCIGTGLFVSTGKSLKNAGPgSLMINFIILSAMILALILSLGEMCCFLPNQSSITMYTGRLLNNNIGF 148
Cdd:COG1113   17 LKNRHIQMIALGGAIGTGLFLGSGKAIALAGP-AVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYAREYLGPWAGF 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 149 AQSWLYFWIWLTVLPSEISAACEVVDFWTTqHLNPAIWVTIFLAYVVLVNAFGARSYGECEFVSSFLKVviviifffvai 228
Cdd:COG1113   96 VTGWLYWFFWVLVGMAEATAVGIYLQFWFP-DVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKV----------- 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 229 iincgAA------------------PKGGYIG-AHYWHHPGSFRNGFKGFCSVFISSAYSLSGTENIGTAAGNTSNPQRA 289
Cdd:COG1113  164 -----VAivafivvgllliffgfglPGGPPAGlSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKT 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 290 IPSAVKKVFYRMGFFYIITIFLITLVVPYDNPDLGnVSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAM 369
Cdd:COG1113  239 IPKAINSVIWRILLFYVGSLFVILALVPWNQIGAG-GSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLY 317
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 370 ALVKQGWAPRFLGRVDQKGRPVISYLCS-LAMACIAYVNA-APDGsvVFDWLMSVSGGGAFVIWGLSFIDHIRLRYAMKA 447
Cdd:COG1113  318 SLAERGDAPKFFGKLSKRGVPVRAILLSaVVLLIGVVLNYlLPEK--AFTFLLSISGFGALFVWLMILVSQLKFRRRLPR 395
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 162312325 448 QKIPDtvLPYKFPGSVYLSYYGvlinfLALCALVYISIFPVTHEKPSAYGFFVSFLGpsVFIAYLL 513
Cdd:COG1113  396 EGAAA--LKFKMPGFPYTSYLT-----LAFLAAVLVLMAFDPDTRIALIVGPVWLAL--LVVGYFL 452
PRK10836 PRK10836
lysine transporter; Provisional
69-460 4.80e-70

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 234.33  E-value: 4.80e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  69 LKPRHLQMIAIGSCIGTGLFVSTGKSLKNAGPGSLMINFIILSAMILALILSLGEMCCFLPNQSSITMYTGRLLNNNIGF 148
Cdd:PRK10836  17 LKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGF 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 149 AQSWLYFWIWLTVLPSEISAACEVVDFWTTQhlNPA-IWVTIFLAYVVLVNAFGARSYGECEFVSSFLKVVIVIIFFFVA 227
Cdd:PRK10836  97 ALGWNYWYNWAVTIAVDLVAAQLVMSWWFPD--TPGwIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFIIVG 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 228 IIINCGAAPKGGYIGAHYWH-HPGSFRNGFKGFCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKKVFYRMGFFYI 306
Cdd:PRK10836 175 VLMIIGIFKGAEPAGWSNWTiGDAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQVFWRILLFYV 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 307 ITIFLITLVVPYDNPDLG-------NVSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALVKQGWAPR 379
Cdd:PRK10836 255 FAILIISLIIPYTDPSLLrndvkdiSVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPR 334
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 380 FLGRVDQKGRPVISYLCSLAMACIAYVNAAPDGSVVFDWLMSVSGGGAFVIWGLSFIDHIRLRYAMKAQKIPDTVLPYK- 458
Cdd:PRK10836 335 IFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVLQGHDLNDLPYRs 414

                 ....
gi 162312325 459 --FP 460
Cdd:PRK10836 415 gfFP 418
PRK10238 PRK10238
aromatic amino acid transporter AroP;
69-464 1.64e-44

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 164.36  E-value: 1.64e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  69 LKPRHLQMIAIGSCIGTGLFVSTGKSLKNAGPGsLMINFIILSAMILALILSLGEMCCFLPNQSSITMYTGRLLNNNIGF 148
Cdd:PRK10238  14 LKNRHIQLIALGGAIGTGLFLGSASVIQSAGPG-IILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGF 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 149 AQSWLYFWIWLTVLPSEISAACEVVDFWTtqhlnPAI--WVTIFLAYVVL--VNAFGARSYGECEFVSSFLKVVIVIIFF 224
Cdd:PRK10238  93 ASGWNYWVLYVLVAMAELTAVGKYIQFWY-----PEIptWVSAAVFFVVInaINLTNVKVFGEMEFWFAIIKVIAVVAMI 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 225 FVAI--IINCGAAPKGGYigAHYWHHPGSFRNGFKGFCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKKVFYRMG 302
Cdd:PRK10238 168 IFGGwlLFSGNGGPQATV--SNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVIYRIL 245
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 303 FFYIITIFLITLVVPYDNPDlGNVSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALVKQGWAPRFLG 382
Cdd:PRK10238 246 IFYIGSLAVLLSLMPWTRVT-ADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALA 324
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 383 RVDQKGRPVISYLCSLAMA--CIAYVNAAPDGSvvFDWLMSVSGGGAFVIWGLSFIDHIRLRYAMKAQKIPDtvlpyKFP 460
Cdd:PRK10238 325 SVDKRGVPVNTILVSALVTalCVLINYLAPESA--FGLLMALVVSALVINWAMISLAHMKFRRAKQEQGVVT-----RFP 397

                 ....
gi 162312325 461 GSVY 464
Cdd:PRK10238 398 ALLY 401
PRK11387 PRK11387
S-methylmethionine permease;
69-482 4.07e-44

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 163.48  E-value: 4.07e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  69 LKPRHLQMIAIGSCIGTGLFVSTGKSLKNAGPGSLMINFIILSAMILALILSLGEMCCFLPNQSSITMYTGRLLNNNIGF 148
Cdd:PRK11387  16 MKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALVVYLVMQCLGELSVAMPETGAFHVYAARYLGPATGY 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 149 AQSWLYFWIWLTVLPSEISAACEVVDFWTTQhlNPA-IWVTIFLAYVVLVNAFGARSYGECEFVSSFLKVVIVIIFFFVA 227
Cdd:PRK11387  96 TVAWLYWLTWTVALGSSLTAAGFCMQYWFPQ--VPVwPWCLLFCALIFGLNVVSTRFFAEGEFWFSLIKVVTILAFIVLG 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 228 IIINCGAAPKGGYIGAHYWHH---PGSFRNGFKGFCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKKVFYRMGFF 304
Cdd:PRK11387 174 GAAIFGFIPMQDGSPAPGLRNltaEGWFPHGGLPILMTMVAVNFAFSGTELIGIAAGETENPAKVIPVAIRTTIARLVIF 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 305 YIITIFLITLVVPYDNPDLGNvSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALVKQGWAPRFLGRV 384
Cdd:PRK11387 254 FVGTVLVLAALIPMQQAGVEK-SPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYASGRMLWSLSNEGTLPACFARL 332
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 385 DQKGRPVISYLCSLAMACIAYVNA--APDgsVVFDWLMSVSGGGAFVIWGLSFIDHIRLRYAMKAQKIPDTVLPYKFPGS 462
Cdd:PRK11387 333 TKRGIPLTALSVSMLGGLLALFSSvvAPD--TVFVALSAISGFAVVAVWLSICASHFMFRRRHLRDGKALSELAYRAPWY 410
                        410       420
                 ....*....|....*....|
gi 162312325 463 VYLSYYGVLINFLALCALVY 482
Cdd:PRK11387 411 PLTPILGFVLCLLACVGLAF 430
PRK10249 PRK10249
phenylalanine transporter; Provisional
69-485 6.10e-43

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 160.15  E-value: 6.10e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  69 LKPRHLQMIAIGSCIGTGLFVSTGKSLKNAGPgSLMINFIILSAMILALILSLGEMCCFLPNQSSITMYTGRLLNNNIGF 148
Cdd:PRK10249  23 LHNRHIQLIALGGAIGTGLFLGIGPAIQMAGP-AVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGF 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 149 AQSWLYFWIWLTVLPSEISAACEVVDFWTTQhLNPAIWVTIFLAYVVLVNAFGARSYGECEFVSSFLKVVIVIIFFFVAI 228
Cdd:PRK10249 102 LSGWNYWVMFVLVGMAELTAAGIYMQYWFPD-VPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGL 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 229 IINCGaapkgGYIGAH-----YWHHPGSFRNGFKGFCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKKVFYRMGF 303
Cdd:PRK10249 181 WLLFS-----GHGGEKasidnLWRYGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILL 255
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 304 FYIITIFLITLVVPYDNPDlGNVSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALVKQGWAPRFLGR 383
Cdd:PRK10249 256 FYIGSLVVLLALYPWVEVK-SNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTR 334
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 384 VDQKGRPVISYLCSLAMACIAYVNAAPDGSVVFDWLMSVSGGGAFVIWGLSFIDHIRLRYAMKAQKIPDTVLPYKFPGSV 463
Cdd:PRK10249 335 VSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRFRAAMRRQGRETQFKALLYPFGN 414
                        410       420
                 ....*....|....*....|..
gi 162312325 464 YLSyygvlINFLALCALVYISI 485
Cdd:PRK10249 415 YLC-----IAFLGMILLLMCTM 431
PRK10746 PRK10746
putative transport protein YifK; Provisional
69-489 1.67e-39

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 150.35  E-value: 1.67e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  69 LKPRHLQMIAIGSCIGTGLFVSTGKSLKNAGPgSLMINFIILSAMILALILSLGEMCCFLPNQSSITMYTGRLLNNNIGF 148
Cdd:PRK10746  12 LEARHIELIALGGTIGVGLFMGAASTLKWAGP-SVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGY 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 149 AQSWLYFWIWLTVLPSEISAACEVVDFWTTQhLNPAIWVTIFLAYVVLVNAFGARSYGECEFVSSFLKVVIVIIFFFVAI 228
Cdd:PRK10746  91 LTAWSYWFMWMAVGISEITAIGVYVQFWFPE-MAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIVMIVIGL 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 229 -IINCGAAPKGGYIG-AHYWHHPGSFRNGFKGFCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKKVFYRMGFFYI 306
Cdd:PRK10746 170 gVIFFGFGNGGQSIGfSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRILIFYV 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 307 ITIFLITLVVPYDnpDLG-NVSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALVKQGWAPRFLGRVD 385
Cdd:PRK10746 250 GAIFVIVTIFPWN--EIGsNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAAMAKVS 327
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 386 QKGRPV----ISYLCSLAMACIAYVnaAPDGSVVFDWLMSVSGGGAFVIWGLSFIDHIRLRYAMKAQKIPDTVLPYKFPG 461
Cdd:PRK10746 328 RHGVPVagvaVSILILLVGSCLNYI--IPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAAIASHPFRSILFPW 405
                        410       420
                 ....*....|....*....|....*...
gi 162312325 462 SVYLSyygvlINFLaLCALVYISIFPVT 489
Cdd:PRK10746 406 ANYLT-----MAFL-ICVLIGMYFNEDT 427
PRK10197 PRK10197
GABA permease;
76-448 2.91e-37

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 143.99  E-value: 2.91e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  76 MIAIGSCIGTGLFVSTGKSLKNAGPgSLMINFIILSAMILALILSLGEMCCFLPNQSSITMYTGRLLNNNIGFAQSWLYF 155
Cdd:PRK10197   1 MLSIAGVIGASLFVGSSVAIAEAGP-AVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYW 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 156 WIWLTVLPSEISAACEVVDFWTtqhlnPAIWVTIFLAYVVLV----NAFGARSYGECEFVSSFLKVVIVIIFFFVAIIIN 231
Cdd:PRK10197  80 WFWVLVIPLEANIAAMILHSWV-----PGIPIWLFSLVITLAltgsNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAI 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 232 CGAAPKGGYIG-AHYWHHPGSFRNGFKGFCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKKVFYRMGFFYIITIF 310
Cdd:PRK10197 155 SGFYPYAEVSGiSRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIF 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 311 LITLVVPYDNPDLGNVSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALVKQGWAPRFLGRVDQKGRP 390
Cdd:PRK10197 235 VVVALIPWNMPGLKAVGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTP 314
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 162312325 391 VISYLCSLAMACIAYVNAAPDGSVVFDWLMSVSGGGAFVIWGLSFIDHIRLRYAMKAQ 448
Cdd:PRK10197 315 YVAVLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAE 372
PRK15049 PRK15049
L-asparagine permease;
72-482 5.84e-36

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 141.30  E-value: 5.84e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  72 RHLQMIAIGSCIGTGLFVSTGKSLKNAGPgSLMINFIILSAMILALILSLGEMCCFLPNQSSITMYTGRLLNNNIGFAQS 151
Cdd:PRK15049  33 RQVQMIAIGGAIGTGLFLGAGARLQMAGP-ALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAG 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 152 WLYFWIWLTVLPSEISAACEVVDFWTTQHLNPAiWVTIF--LAYVVLVNAFGARSYGECEFVSSFLKVVIVIIFFFV-AI 228
Cdd:PRK15049 112 WMYFINWAMTGIVDITAVALYMHYWGAFGGVPQ-WVFALaaLTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLVVgTV 190
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 229 IINCGAAPKGGYIGAHY-WHHPGSFRNGFKGFCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKKVFYRMGFFYII 307
Cdd:PRK15049 191 FLGSGQPLDGNTTGFHLiTDNGGFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGLFYVG 270
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 308 TIFLITLVVPYDNPDLGNvSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALVKQGWAPRFLGRVDQK 387
Cdd:PRK15049 271 SVVLLVMLLPWSAYQAGQ-SPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPSFMAKMSRQ 349
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 388 GRPVISYLCSLAMACIAYVNAAPDGSVVFDWLMSVSGGGAFVIWGLSFIDHIRLRYAMKAQKIPDtvLPYKFPGSVYLSY 467
Cdd:PRK15049 350 HVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKAIKEGKAAD--VSFKLPGAPFTSW 427
                        410
                 ....*....|....*..
gi 162312325 468 YGV--LINFLALCALVY 482
Cdd:PRK15049 428 LTLlfLLSVLVLMAFDY 444
proY PRK10580
putative proline-specific permease; Provisional
69-530 7.60e-35

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 137.26  E-value: 7.60e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  69 LKPRHLQMIAIGSCIGTGLFVSTGKSLKNAGPgSLMINFIILSAMILALILSLGEMCCFLPNQSSITMYTGRLLNNNIGF 148
Cdd:PRK10580  11 LSTRHIRFMALGSAIGTGLFYGSADAIKMAGP-SVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGY 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 149 AQSWLYFWIWLTVLPSEISAACEVVDFW--TTQHLnpaIWVTIFLAYVVLVNAFGARSYGECEFVSSFLKVVIVIIFFFV 226
Cdd:PRK10580  90 ITGWTYCFEILIVAIADVTAFGIYMGVWfpTVPHW---IWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVA 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 227 AIIINCGAAPKGGY-IGAH-YWHHPGSFRNGFKGFCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKKVFYRMGFF 304
Cdd:PRK10580 167 GIGIIIWGIGNGGQpTGIHnLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVF 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 305 YIITIFLITLVVPYDNPDLgNVSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALVKQGWAPRFLGRV 384
Cdd:PRK10580 247 YVGTLFVIMSIYPWNQVGT-NGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKT 325
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 385 DQKGRPVISYLC-SLAMACIAYVN-AAPDGsvVFDWLMSVSGGGAFVIWGLSFIDHIRLRYAMKAQKIpdTVLPYKFPGS 462
Cdd:PRK10580 326 SRRGIPWVTVLVmTTALLFAVYLNyIMPEN--VFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEV--KALKFKVPGG 401
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 162312325 463 VYLSYYGVLinFLALCaLVYISIFPVTHekpsaygffVSFLGPSVFIAYLLISPIFVKPTFQSLKDVD 530
Cdd:PRK10580 402 VATTIGGLI--FLVFI-IGLIGYHPDTR---------ISLYVGFAWIVLLLIGWMFKRRHDRQLAEAQ 457
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
69-467 3.23e-34

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 135.63  E-value: 3.23e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  69 LKPRHLQMIAIGSCIGTGLFVSTGKSLKNAGPgSLMINFIILSAMILALILSLGEMCCFLPNQSSITMYTGRLLNNNIGF 148
Cdd:PRK11049  22 LTNRHIQLIAIGGAIGTGLFMGSGKTISLAGP-SIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGY 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 149 AQSWLYFWIWLTVLPSEISAACEVVDFWTTqhlNPAIWVTIFLAYVVLV--NAFGARSYGECEFVSSFLKVVIViifffv 226
Cdd:PRK11049 101 FTGWTYWFCWVVTGIADVVAITAYAQFWFP---DLSDWVASLAVVLLLLslNLATVKMFGEMEFWFAMIKIVAI------ 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 227 aiiinCGAAPKGGY-IGAHY-------------WHHPGSFRNGFKGFCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPS 292
Cdd:PRK11049 172 -----VALIVVGLVmVAMHFqsptgveasfahlWNDGGMFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPR 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 293 AVKKVFYRMGFFYIITIFLITLVVPYDNPdLGNVSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALV 372
Cdd:PRK11049 247 AINSIPIRIIMFYVFALIVIMSVTPWSSV-VPDKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLA 325
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 373 KQGWAPRFLGRVDQKGRP----VISYLCSLAMACIAYVNaaPDGSVVFDWLMSVSGGGAFVIWGL---SFIDHIRLRYAM 445
Cdd:PRK11049 326 QEGVAPKAFAKLSKRAVPakglTFSCICLLGGVVLLYVN--PSVIGAFTLVTTVSAILFMFVWTIilcSYLVYRKQRPHL 403
                        410       420
                 ....*....|....*....|..
gi 162312325 446 KAQKIpdtvlpYKFPGSVYLSY 467
Cdd:PRK11049 404 HEKSI------YKMPLGKLMCW 419
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
69-513 1.84e-32

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 130.02  E-value: 1.84e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  69 LKPRHLQMIAIGSCIGTGLFVSTGKSLKNAGPGSLMInFIILSAMILALILSLGEMCCFLPNQSSITMYTGRLLNNNIGF 148
Cdd:COG0531   13 LGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILA-WLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGPLLGF 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 149 AQSWLYFWIWLTVLPSEISAACEVVDFWTTQHLNpAIWVTIFLAYVVLVNAFGARSYGECEFVSSFLKVVIVIIFFFVAI 228
Cdd:COG0531   92 LAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGS-VLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLLLFIVVGL 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 229 IincgaapkggYIGAHYWHHPGSFRNGFKGFCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKKVFYRMGFFYIIT 308
Cdd:COG0531  171 F----------AFDPANFTPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYILV 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 309 IFLITLVVPYDNPDlGNVSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALVKQGWAPRFLGRVDQKG 388
Cdd:COG0531  241 SLALTGVVPYDELA-ASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKVHPRF 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325 389 R-PVISYLCSLAMACIAyvnAAPdGSVVFDWLMSVSGGGAFVIWGLSFIDHIRLRYamkaqKIPDTVLPYKFPGSVylsy 467
Cdd:COG0531  320 GtPVNAILLTGVIALLL---LLL-GAASFTALASLASVGVLLAYLLVALAVIVLRR-----RRPDLPRPFRVPLPL---- 386
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*.
gi 162312325 468 ygvlINFLALCALVYISIFPVthekPSAYGFFVSFLGPSVFIAYLL 513
Cdd:COG0531  387 ----IPILGILLCLFLLYLLG----PGALLIGLVLLAIGLLLYLLY 424
AA_permease_2 pfam13520
Amino acid permease;
77-503 1.18e-20

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 94.68  E-value: 1.18e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325   77 IAIGSCIGTGLFVSTGksLKNAGPGSLMINFIILSAMILALILSLGEMCCFLPNQSSITMYTGRLLNNNIGFAQSWLYFW 156
Cdd:pfam13520   9 LVIGSVIGSGIFVAPL--VASGGPALIVWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNWF 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  157 IWLTVLPSEISAACEVVDFWTTQHLNPAIWVT-----IFLAYVVLVNAFGARSYGECEFVSSFLKVVIVIIFFFVAIIin 231
Cdd:pfam13520  87 AYVLGLASSASVAASYLLSALGPDLVPTTWLTygiaiAILIIFAIINIRGVRESAKIQNILGILKLLLPLILIIILGL-- 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  232 cgAAPKGGYIGAHYWHHPGSFRNGFKGFCSVFISSAYSLSGTENIgtAAGNTSNPQRAIPSAVKKVFYRMGFFYIITIFL 311
Cdd:pfam13520 165 --VTADGGGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESA--ANVSEEVKKRNVPKAIFIGVIIVGVLYILVNIA 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  312 ITLVVPYDNPDLGNVSPFIIAI--KNGGIHVLPHITNAVILVSVLSVGNAAVFAASRNAMALVKQGWAP--RFLGRVDQK 387
Cdd:pfam13520 241 FFGVVPDDEIALSSGLGQVAALlfQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfsRFFAKVNKF 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  388 GRPVISYLCSLAMACIAYVNAAPdGSVVFDWLMSVSGGGAFVIWGLSFIDHIRLRYAMKAQKipdtvlpyKFPGSVYLSY 467
Cdd:pfam13520 321 GSPIRAIILTAILSLILLLLFLL-SPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLG--------RIPGRWPVAI 391
                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 162312325  468 YGVLINFLALCALVYISIFPVTHEKPSAYGFFVSFL 503
Cdd:pfam13520 392 FGILFSLFLIVALFFPPVGPATGSSLNYAIILIVAF 427
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
74-403 6.19e-09

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 58.67  E-value: 6.19e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325   74 LQMIAIGSCIGTGLFVSTGKSLKN-AGPgSLMINFII--LSAMILAliLSLGEMCCFLPNQSSITMYTgrllnnNIGFAQ 150
Cdd:TIGR00906  35 LMALGIGSTIGAGIYVLTGEVARNdSGP-AIVLSFLIsgLAAVLSG--FCYAEFGARVPKAGSAYLYS------YVTVGE 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  151 SWLYFWIWLTVLPSEISAAC---------------EVVDFWTTQH--------LNPAIWVTIFLAYVVLVNAFGARSYGE 207
Cdd:TIGR00906 106 LWAFITGWNLILEYVIGTAAvarswsayfdellnkQIGQFRRTYFklnydglaEYPDFFAVCLILLLAVLLSFGVKESAW 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  208 CEFVSSFLKVVIVIIFFFVAIIINCGAAPKGGYIGAHYWHHPGSFRNGFKGFCSVFissaYSLSGTENIGTAAGNTSNPQ 287
Cdd:TIGR00906 186 VNKIFTAINILVLLFVIIAGFTKADVANWSITEEKGAGGFMPYGFTGVLSGAATCF----FAFIGFDAIATTGEEVKNPQ 261
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  288 RAIPSAVKKVFYRMGFFYIITIFLITLVVPYD--NPDlgnvSPFIIAIKNGGIHVLPHITNAVILVSVLSVGNAAVFAAS 365
Cdd:TIGR00906 262 RAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYllDPD----APFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFPLP 337
                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 162312325  366 RNAMALVKQGWAPRFLGRVDQK-GRPVISYLCSLAMACI 403
Cdd:TIGR00906 338 RVIYAMARDGLLFKWLAQINSKtKTPINATVVSGAIAAL 376
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
263-491 7.83e-03

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 38.96  E-value: 7.83e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  263 FISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKK---VFYRMGFFYIITIFlitlVVPYDNPDLGNVSP-------FIIA 332
Cdd:TIGR00907 223 LLNPAWSMTGYDGTAHMAEEIENPEVVGPRAIIGavaIGIVTGFCFNIVLF----FSMGDIDSLISSTTgqpiaqiFYNA 298
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  333 IKN--GGIHVLphitnAVILVSVLSVGNAAVFAASRNAMALVKQGWAP--RFLGRVDQK-GRPVI----SYLCSLAMACI 403
Cdd:TIGR00907 299 LGNkaGAIFLL-----CLILVTSFFCAITCMTANSRMIYAFSRDGGLPfsPLWSRVNPRtQVPLNavwlSAVWIILIGLL 373
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 162312325  404 AYVNaapdgSVVFDWLMSVSGGGAFVIWGLSFIdhIRLRYAMKAQKipdtvlpykfPGSVYLSYYGVLINFLALCALVYI 483
Cdd:TIGR00907 374 GLGS-----STAFQAIFSVCTVALDVSYVIPII--CKLAKGRNTIA----------PGPFWLGKYGFFVNAVAVAWTVFS 436
                         250
                  ....*....|....*
gi 162312325  484 SIF-------PVTHE 491
Cdd:TIGR00907 437 SVLfsfppvlPVTPE 451
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH