|
Name |
Accession |
Description |
Interval |
E-value |
| ELYS |
pfam13934 |
Nuclear pore complex assembly; ELYS (embryonic large molecule derived from yolk sac) is ... |
714-914 |
1.07e-52 |
|
Nuclear pore complex assembly; ELYS (embryonic large molecule derived from yolk sac) is conserved from fungi such Aspergillus nidulans and Schizosaccharomyces pombe to human. It is important for the assembly of the nuclear pore complex.
:
Pssm-ID: 464050 Cd Length: 219 Bit Score: 184.75 E-value: 1.07e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 714 LYIDSL-------GKRASFPEPYPPDSLHAYIHLML----SPDIELCHKHALILYLLMDL------NQQLVGRFQIAFQL 776
Cdd:pfam13934 2 LFIDRLlsalgiqKDSGGASKLYPPKSLQALRDLLLaigsSSDIDLLHKHSLIYYLLLDLdadgrnWSELAEDFARAFGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 777 DKDLATSLRCFWYLDHGDYERGVEELYkEPAPAKNLKSwqmrLLIDKLLAEGAVKAAKKVVSRPPGPLSSA---LHMKVL 853
Cdd:pfam13934 82 PPKYVKLMQGFWLLDHGDFEEALELLT-HPSLIPDFPD----KILQALLRQGDPSLALRYLRTVQPPLSSSealEALFVL 156
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 24643345 854 LANENITEAFQIARLDDDEDgQPLLERFFRHCIEI---RRFKVLAELYLREPEERLLYSLLRQC 914
Cdd:pfam13934 157 LANTSVTEAFYFQRTHPDKA-EELLERLIEHCLETsraRRAKELLSLPLTEEEEEWLEEFLLSG 219
|
|
| ELYS-bb super family |
cl25041 |
beta-propeller of ELYS nucleoporin; ELYS-bb is the N-terminal seven-bladed beta-propeller ... |
166-482 |
2.21e-07 |
|
beta-propeller of ELYS nucleoporin; ELYS-bb is the N-terminal seven-bladed beta-propeller domain of ELYS nucleoporins in higher eukaryotes. It is required for anchorage of the nucleoporin to the nuclear envelope during cell-division.
The actual alignment was detected with superfamily member pfam16687:
Pssm-ID: 465233 Cd Length: 488 Bit Score: 55.68 E-value: 2.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 166 LRRFKGCLAVATEEGTVLLVDLNSDSLQAStqrrslcspssKDEPSDGNLYFVSseeskrQLSSKLTHCRS----KGAHL 241
Cdd:pfam16687 148 LRWLFGVAAVVTDVGHVLLVDLCLDDLSCS-----------QNELEASDLEVVT------GIPAEVPRIREvvtrAGRHL 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 242 AVRMDVAS-IGISCLMGISMAPGYAAGLEDGRILIYDLINfdVTTDLNSPVKRKGVnrAVKRMCLIMPPDDPKPCFYICA 320
Cdd:pfam16687 211 CFQLQSPSgVAVSTLSYINRTNQLAVGFSDGYLQLWNMKT--LKREYHSQLEGGRV--PVYAVTFQEPENDPRNCCYLWA 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 321 LYQNI----DVLQMMLHSVCYrGSYRDRETHTIRFKDYRSRTVRNRQILDGGICSV---------IGCATASTFSFAGDN 387
Cdd:pfam16687 287 VQSTQdsegDVLSLHLLQLAF-GDRKCLASGQILYEGLEYCEERYSLDLTGGVFPLrgqtsntrlLGCQTIEKFRNHIDR 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 388 ----------GTLLIVISWHSSADKKNK----LVLFDINQWYKDEMPTSVHKNEVPNYMSGYILSGLQT-------GLAL 446
Cdd:pfam16687 366 eesmnevlspDTSVSVFSWQVNIYGQGTpstyLGVFDINRWYHAQMPDSLRPGESLHNCPYFALWSLDSvvsmtspHVLL 445
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 24643345 447 DLrsttILHFVSLQRY--------DEHFYPNSLTFDCSLLTPTG 482
Cdd:pfam16687 446 DI----LVHERSLSRGvppsypppEQFFNPSTYNFDATCLLNSG 485
|
|
| DUF5585 super family |
cl39316 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
1855-2095 |
3.78e-06 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
The actual alignment was detected with superfamily member pfam17823:
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 51.88 E-value: 3.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1855 IHTLRPRRSFTEHQDsPRTLR-----PRRVSQEHRDSPTPVAGRTMSLRSTDAPTLSPASnpPVSTPKRRGLQHKYLLEV 1929
Cdd:pfam17823 10 IFSLPLSESHAAPAD-PRHFVlnkmwNGAGKQNASGDAVPRADNKSSEQ*NFCAATAAPA--PVTLTKGTSAAHLNSTEV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1930 IDEHSP--SDLSLPRTRSRTrlsVDSeATSSRPGTPT----MTKARGKRATSQAPPTASPSVRRslrghseppaalsAQL 2003
Cdd:pfam17823 87 TAEHTPhgTDLSEPATREGA---ADG-AASRALAAAAssspSSAAQSLPAAIAALPSEAFSAPR-------------AAA 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 2004 VRKPKTaragVRSRKTSSGVQSPVAVSPTPIDAPIDVPDSTAPEEEQPRLRRTARRRISELSDQSANGTgdlrseaSSSR 2083
Cdd:pfam17823 150 CRANAS----AAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGIST-------AATA 218
|
250
....*....|..
gi 24643345 2084 TGSKSNSAASTQ 2095
Cdd:pfam17823 219 TGHPAAGTALAA 230
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ELYS |
pfam13934 |
Nuclear pore complex assembly; ELYS (embryonic large molecule derived from yolk sac) is ... |
714-914 |
1.07e-52 |
|
Nuclear pore complex assembly; ELYS (embryonic large molecule derived from yolk sac) is conserved from fungi such Aspergillus nidulans and Schizosaccharomyces pombe to human. It is important for the assembly of the nuclear pore complex.
Pssm-ID: 464050 Cd Length: 219 Bit Score: 184.75 E-value: 1.07e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 714 LYIDSL-------GKRASFPEPYPPDSLHAYIHLML----SPDIELCHKHALILYLLMDL------NQQLVGRFQIAFQL 776
Cdd:pfam13934 2 LFIDRLlsalgiqKDSGGASKLYPPKSLQALRDLLLaigsSSDIDLLHKHSLIYYLLLDLdadgrnWSELAEDFARAFGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 777 DKDLATSLRCFWYLDHGDYERGVEELYkEPAPAKNLKSwqmrLLIDKLLAEGAVKAAKKVVSRPPGPLSSA---LHMKVL 853
Cdd:pfam13934 82 PPKYVKLMQGFWLLDHGDFEEALELLT-HPSLIPDFPD----KILQALLRQGDPSLALRYLRTVQPPLSSSealEALFVL 156
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 24643345 854 LANENITEAFQIARLDDDEDgQPLLERFFRHCIEI---RRFKVLAELYLREPEERLLYSLLRQC 914
Cdd:pfam13934 157 LANTSVTEAFYFQRTHPDKA-EELLERLIEHCLETsraRRAKELLSLPLTEEEEEWLEEFLLSG 219
|
|
| ELYS-bb |
pfam16687 |
beta-propeller of ELYS nucleoporin; ELYS-bb is the N-terminal seven-bladed beta-propeller ... |
166-482 |
2.21e-07 |
|
beta-propeller of ELYS nucleoporin; ELYS-bb is the N-terminal seven-bladed beta-propeller domain of ELYS nucleoporins in higher eukaryotes. It is required for anchorage of the nucleoporin to the nuclear envelope during cell-division.
Pssm-ID: 465233 Cd Length: 488 Bit Score: 55.68 E-value: 2.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 166 LRRFKGCLAVATEEGTVLLVDLNSDSLQAStqrrslcspssKDEPSDGNLYFVSseeskrQLSSKLTHCRS----KGAHL 241
Cdd:pfam16687 148 LRWLFGVAAVVTDVGHVLLVDLCLDDLSCS-----------QNELEASDLEVVT------GIPAEVPRIREvvtrAGRHL 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 242 AVRMDVAS-IGISCLMGISMAPGYAAGLEDGRILIYDLINfdVTTDLNSPVKRKGVnrAVKRMCLIMPPDDPKPCFYICA 320
Cdd:pfam16687 211 CFQLQSPSgVAVSTLSYINRTNQLAVGFSDGYLQLWNMKT--LKREYHSQLEGGRV--PVYAVTFQEPENDPRNCCYLWA 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 321 LYQNI----DVLQMMLHSVCYrGSYRDRETHTIRFKDYRSRTVRNRQILDGGICSV---------IGCATASTFSFAGDN 387
Cdd:pfam16687 287 VQSTQdsegDVLSLHLLQLAF-GDRKCLASGQILYEGLEYCEERYSLDLTGGVFPLrgqtsntrlLGCQTIEKFRNHIDR 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 388 ----------GTLLIVISWHSSADKKNK----LVLFDINQWYKDEMPTSVHKNEVPNYMSGYILSGLQT-------GLAL 446
Cdd:pfam16687 366 eesmnevlspDTSVSVFSWQVNIYGQGTpstyLGVFDINRWYHAQMPDSLRPGESLHNCPYFALWSLDSvvsmtspHVLL 445
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 24643345 447 DLrsttILHFVSLQRY--------DEHFYPNSLTFDCSLLTPTG 482
Cdd:pfam16687 446 DI----LVHERSLSRGvppsypppEQFFNPSTYNFDATCLLNSG 485
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
1855-2095 |
3.78e-06 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 51.88 E-value: 3.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1855 IHTLRPRRSFTEHQDsPRTLR-----PRRVSQEHRDSPTPVAGRTMSLRSTDAPTLSPASnpPVSTPKRRGLQHKYLLEV 1929
Cdd:pfam17823 10 IFSLPLSESHAAPAD-PRHFVlnkmwNGAGKQNASGDAVPRADNKSSEQ*NFCAATAAPA--PVTLTKGTSAAHLNSTEV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1930 IDEHSP--SDLSLPRTRSRTrlsVDSeATSSRPGTPT----MTKARGKRATSQAPPTASPSVRRslrghseppaalsAQL 2003
Cdd:pfam17823 87 TAEHTPhgTDLSEPATREGA---ADG-AASRALAAAAssspSSAAQSLPAAIAALPSEAFSAPR-------------AAA 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 2004 VRKPKTaragVRSRKTSSGVQSPVAVSPTPIDAPIDVPDSTAPEEEQPRLRRTARRRISELSDQSANGTgdlrseaSSSR 2083
Cdd:pfam17823 150 CRANAS----AAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGIST-------AATA 218
|
250
....*....|..
gi 24643345 2084 TGSKSNSAASTQ 2095
Cdd:pfam17823 219 TGHPAAGTALAA 230
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1819-2108 |
7.06e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.48 E-value: 7.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1819 HNPEPLLPEEEDSRHSLKLIFSGDEDEEEQD----VPTRAIHTLRPRRSFTEHQDSPRTLRPRRvsqehRDSPTPVAGRT 1894
Cdd:PHA03247 2622 HAPDPPPPSPSPAANEPDPHPPPTVPPPERPrddpAPGRVSRPRRARRLGRAAQASSPPQRPRR-----RAARPTVGSLT 2696
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1895 mSLRSTDAPTLSPASNPPVSTPkrrGLQHKYLLEVIDEHSPSDLSLPRTRSRTRLSVdSEATSSRPGTPTMTKARGKRAT 1974
Cdd:PHA03247 2697 -SLADPPPPPPTPEPAPHALVS---ATPLPPGPAAARQASPALPAAPAPPAVPAGPA-TPGGPARPARPPTTAGPPAPAP 2771
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1975 SQAPPTASPSVRRSLRGHSEPPAALSAQLVRKPKTARAGVRSRK-TSSGVQSPVAVSPTPIdAPIDVPDSTAPEEEQPRL 2053
Cdd:PHA03247 2772 PAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAaALPPAASPAGPLPPPT-SAQPTAPPPPPGPPPPSL 2850
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 24643345 2054 RrtarrriseLSDQSANGtGDLRSEASSSRTGSKsnSAASTqnrelRPRLRRTSK 2108
Cdd:PHA03247 2851 P---------LGGSVAPG-GDVRRRPPSRSPAAK--PAAPA-----RPPVRRLAR 2888
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ELYS |
pfam13934 |
Nuclear pore complex assembly; ELYS (embryonic large molecule derived from yolk sac) is ... |
714-914 |
1.07e-52 |
|
Nuclear pore complex assembly; ELYS (embryonic large molecule derived from yolk sac) is conserved from fungi such Aspergillus nidulans and Schizosaccharomyces pombe to human. It is important for the assembly of the nuclear pore complex.
Pssm-ID: 464050 Cd Length: 219 Bit Score: 184.75 E-value: 1.07e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 714 LYIDSL-------GKRASFPEPYPPDSLHAYIHLML----SPDIELCHKHALILYLLMDL------NQQLVGRFQIAFQL 776
Cdd:pfam13934 2 LFIDRLlsalgiqKDSGGASKLYPPKSLQALRDLLLaigsSSDIDLLHKHSLIYYLLLDLdadgrnWSELAEDFARAFGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 777 DKDLATSLRCFWYLDHGDYERGVEELYkEPAPAKNLKSwqmrLLIDKLLAEGAVKAAKKVVSRPPGPLSSA---LHMKVL 853
Cdd:pfam13934 82 PPKYVKLMQGFWLLDHGDFEEALELLT-HPSLIPDFPD----KILQALLRQGDPSLALRYLRTVQPPLSSSealEALFVL 156
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 24643345 854 LANENITEAFQIARLDDDEDgQPLLERFFRHCIEI---RRFKVLAELYLREPEERLLYSLLRQC 914
Cdd:pfam13934 157 LANTSVTEAFYFQRTHPDKA-EELLERLIEHCLETsraRRAKELLSLPLTEEEEEWLEEFLLSG 219
|
|
| ELYS-bb |
pfam16687 |
beta-propeller of ELYS nucleoporin; ELYS-bb is the N-terminal seven-bladed beta-propeller ... |
166-482 |
2.21e-07 |
|
beta-propeller of ELYS nucleoporin; ELYS-bb is the N-terminal seven-bladed beta-propeller domain of ELYS nucleoporins in higher eukaryotes. It is required for anchorage of the nucleoporin to the nuclear envelope during cell-division.
Pssm-ID: 465233 Cd Length: 488 Bit Score: 55.68 E-value: 2.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 166 LRRFKGCLAVATEEGTVLLVDLNSDSLQAStqrrslcspssKDEPSDGNLYFVSseeskrQLSSKLTHCRS----KGAHL 241
Cdd:pfam16687 148 LRWLFGVAAVVTDVGHVLLVDLCLDDLSCS-----------QNELEASDLEVVT------GIPAEVPRIREvvtrAGRHL 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 242 AVRMDVAS-IGISCLMGISMAPGYAAGLEDGRILIYDLINfdVTTDLNSPVKRKGVnrAVKRMCLIMPPDDPKPCFYICA 320
Cdd:pfam16687 211 CFQLQSPSgVAVSTLSYINRTNQLAVGFSDGYLQLWNMKT--LKREYHSQLEGGRV--PVYAVTFQEPENDPRNCCYLWA 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 321 LYQNI----DVLQMMLHSVCYrGSYRDRETHTIRFKDYRSRTVRNRQILDGGICSV---------IGCATASTFSFAGDN 387
Cdd:pfam16687 287 VQSTQdsegDVLSLHLLQLAF-GDRKCLASGQILYEGLEYCEERYSLDLTGGVFPLrgqtsntrlLGCQTIEKFRNHIDR 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 388 ----------GTLLIVISWHSSADKKNK----LVLFDINQWYKDEMPTSVHKNEVPNYMSGYILSGLQT-------GLAL 446
Cdd:pfam16687 366 eesmnevlspDTSVSVFSWQVNIYGQGTpstyLGVFDINRWYHAQMPDSLRPGESLHNCPYFALWSLDSvvsmtspHVLL 445
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 24643345 447 DLrsttILHFVSLQRY--------DEHFYPNSLTFDCSLLTPTG 482
Cdd:pfam16687 446 DI----LVHERSLSRGvppsypppEQFFNPSTYNFDATCLLNSG 485
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
1855-2095 |
3.78e-06 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 51.88 E-value: 3.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1855 IHTLRPRRSFTEHQDsPRTLR-----PRRVSQEHRDSPTPVAGRTMSLRSTDAPTLSPASnpPVSTPKRRGLQHKYLLEV 1929
Cdd:pfam17823 10 IFSLPLSESHAAPAD-PRHFVlnkmwNGAGKQNASGDAVPRADNKSSEQ*NFCAATAAPA--PVTLTKGTSAAHLNSTEV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1930 IDEHSP--SDLSLPRTRSRTrlsVDSeATSSRPGTPT----MTKARGKRATSQAPPTASPSVRRslrghseppaalsAQL 2003
Cdd:pfam17823 87 TAEHTPhgTDLSEPATREGA---ADG-AASRALAAAAssspSSAAQSLPAAIAALPSEAFSAPR-------------AAA 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 2004 VRKPKTaragVRSRKTSSGVQSPVAVSPTPIDAPIDVPDSTAPEEEQPRLRRTARRRISELSDQSANGTgdlrseaSSSR 2083
Cdd:pfam17823 150 CRANAS----AAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGIST-------AATA 218
|
250
....*....|..
gi 24643345 2084 TGSKSNSAASTQ 2095
Cdd:pfam17823 219 TGHPAAGTALAA 230
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1819-2108 |
7.06e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.48 E-value: 7.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1819 HNPEPLLPEEEDSRHSLKLIFSGDEDEEEQD----VPTRAIHTLRPRRSFTEHQDSPRTLRPRRvsqehRDSPTPVAGRT 1894
Cdd:PHA03247 2622 HAPDPPPPSPSPAANEPDPHPPPTVPPPERPrddpAPGRVSRPRRARRLGRAAQASSPPQRPRR-----RAARPTVGSLT 2696
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1895 mSLRSTDAPTLSPASNPPVSTPkrrGLQHKYLLEVIDEHSPSDLSLPRTRSRTRLSVdSEATSSRPGTPTMTKARGKRAT 1974
Cdd:PHA03247 2697 -SLADPPPPPPTPEPAPHALVS---ATPLPPGPAAARQASPALPAAPAPPAVPAGPA-TPGGPARPARPPTTAGPPAPAP 2771
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1975 SQAPPTASPSVRRSLRGHSEPPAALSAQLVRKPKTARAGVRSRK-TSSGVQSPVAVSPTPIdAPIDVPDSTAPEEEQPRL 2053
Cdd:PHA03247 2772 PAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAaALPPAASPAGPLPPPT-SAQPTAPPPPPGPPPPSL 2850
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 24643345 2054 RrtarrriseLSDQSANGtGDLRSEASSSRTGSKsnSAASTqnrelRPRLRRTSK 2108
Cdd:PHA03247 2851 P---------LGGSVAPG-GDVRRRPPSRSPAAK--PAAPA-----RPPVRRLAR 2888
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1860-2046 |
4.47e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 4.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1860 PRRSFTEHQDSPRTLRPRRVSQEHRDS--PTPVAGRT---------MSLRSTDAPTLSPASNPPVSTPKRRG--LQHKYL 1926
Cdd:PHA03247 2564 PDRSVPPPRPAPRPSEPAVTSRARRPDapPQSARPRApvddrgdprGPAPPSPLPPDTHAPDPPPPSPSPAAnePDPHPP 2643
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1927 LEVIDEHSPSDLSLPRTRSRTRlsvdseaTSSRPGTPTMTKARGKRATSQAPPTASPSVRRSLRGHSEPPAALSAqlvrk 2006
Cdd:PHA03247 2644 PTVPPPERPRDDPAPGRVSRPR-------RARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPA----- 2711
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 24643345 2007 pktARAGVRSRKTSSGVQSPVAVSPTPIDAPIDVPDSTAP 2046
Cdd:PHA03247 2712 ---PHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGP 2748
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1849-2106 |
2.58e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 46.32 E-value: 2.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1849 DVPTRAIHTLRPRRSFT--EHQDSPRTLRPRRVSQEHRDSPTPVAGRTMSLRSTDAPTLSPASNPPVSTPKRRGLQHKYL 1926
Cdd:PHA03307 129 SPAPDLSEMLRPVGSPGppPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPR 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1927 LEVIDEH---SPSDLSLPRTRSRTRLSVDSEATSSRPG--------------------TPTMTKARGKRATSQAPPTASP 1983
Cdd:PHA03307 209 RSSPISAsasSPAPAPGRSAADDAGASSSDSSSSESSGcgwgpenecplprpapitlpTRIWEASGWNGPSSRPGPASSS 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1984 SVRRSLRGHSEPPAALSAQLVRKPKTARAGVRSRktSSGVQSPVAVSPTPIDAPidvPDSTAPEEEQPrlrrtarrrise 2063
Cdd:PHA03307 289 SSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSR--ESSSSSTSSSSESSRGAA---VSPGPSPSRSP------------ 351
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 24643345 2064 lSDQSANGTGDLRSEASSSRTGSKSNSAASTQNRELRPRLRRT 2106
Cdd:PHA03307 352 -SPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAA 393
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1869-2051 |
6.79e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.16 E-value: 6.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1869 DSPRTLRPRRVSQEHRDSPTPVAGRTMSLRSTDAPTLSPASNPPVSTPKRrglqhkyllEVIDEHSPSDLSLPR---TRS 1945
Cdd:PHA03307 249 WGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSP---------SPSSPGSGPAPSSPRassSSS 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1946 RTRLSVDSEATSSRPG------TPTMTKARGKRATSQAPPTASPSVRRSLRGHSEPPAALSAQLVRKPKTARAGVRSRKT 2019
Cdd:PHA03307 320 SSRESSSSSTSSSSESsrgaavSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRAR 399
|
170 180 190
....*....|....*....|....*....|..
gi 24643345 2020 SSGVQSPVAVSPTPIDAPIDVPDSTAPEEEQP 2051
Cdd:PHA03307 400 RRDATGRFPAGRPRPSPLDAGAASGAFYARYP 431
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
1840-2051 |
7.76e-04 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 44.66 E-value: 7.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1840 SGDEDEEEQDVPTRAihtlRPRRSftehQDSPRTLRPRRvsqehrdsPTPVaGRTMSL--RSTDAPTLSPASNPPVSTPK 1917
Cdd:PHA03377 437 SGRSDEAEQAQSTPE----RPGPS----DQPSVPVEPAH--------LTPV-EHTTVIlhQPPQSPPTVAIKPAPPPSRR 499
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1918 RRGLQHKY---LLEVIDEHSPSDLSLPRTRSRTRLSVDSEATSSrpgtptmtkarGKRATSQAPPTASPSVRrslrghsE 1994
Cdd:PHA03377 500 RRGACVVYdddIIEVIDVETTEEEESVTQPAKPHRKVQDGFQRS-----------GRRQKRATPPKVSPSDR-------G 561
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 24643345 1995 PPAAlSAQLVRKPKTARAGVRSRKTSSGVQSPVAVSPTPIDAPIDVPDSTAPEEEQP 2051
Cdd:PHA03377 562 PPKA-SPPVMAPPSTGPRVMATPSTGPRDMAPPSTGPRQQAKCKDGPPASGPHEKQP 617
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1886-2051 |
3.76e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.62 E-value: 3.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1886 SPTPVAGR-TMSLRSTDAPTLSPASNPPVSTPKRRGLQHKYLLEVIDehSPSDLSLPRTRSRTRLSVDSEATSSRPGTPT 1964
Cdd:PHA03247 2753 GPARPARPpTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLP--SPWDPADPPAAVLAPAAALPPAASPAGPLPP 2830
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1965 MTKArgkraTSQAPPTASPSVRRSL--------------RGHSEPPAALSAQLVRKP--KTARAGVrSRKTSSGVQSPVA 2028
Cdd:PHA03247 2831 PTSA-----QPTAPPPPPGPPPPSLplggsvapggdvrrRPPSRSPAAKPAAPARPPvrRLARPAV-SRSTESFALPPDQ 2904
|
170 180
....*....|....*....|...
gi 24643345 2029 VSPTPIDAPIDVPDSTAPEEEQP 2051
Cdd:PHA03247 2905 PERPPQPQAPPPPQPQPQPPPPP 2927
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1935-2046 |
4.36e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.17 E-value: 4.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24643345 1935 PSDLSLPRTRSRTRLSVDSEATSSRPGTPTMTKARGKRATSQAPPTASPSVRrslrghSEPPAALSAqlVRKPKTARAGV 2014
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARR------SPAPEALAA--ARQASARGPGG 446
|
90 100 110
....*....|....*....|....*....|..
gi 24643345 2015 RSRKTSSGVQSPVAVSPTPIDAPIDVPDSTAP 2046
Cdd:PRK12323 447 APAPAPAPAAAPAAAARPAAAGPRPVAAAAAA 478
|
|
| |
