NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|19920378|ref|NP_608368|]
View 

uncharacterized protein Dmel_CG9570 [Drosophila melanogaster]

Protein Classification

DUF4818 domain-containing protein( domain architecture ID 11240870)

DUF4818 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF4818 pfam16089
Domain of unknown function (DUF4818); This family of proteins is functionally uncharacterized. ...
 32-148 1.28e-39

Domain of unknown function (DUF4818); This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 176 and 214 amino acids in length. There is a single completely conserved residue W that may be functionally important.


:

Pssm-ID: 465013  Cd Length: 116  Bit Score: 131.56  E-value: 1.28e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19920378    32 PGTIYAGHIAYCAILYFLHDLEILPTRYRsRMGWLTTFLIELVLGVAFMEVLALWLWCSVEHILHLSTQFVLrRYLGVST 111
Cdd:pfam16089   1 PAPLLGSWIFLLAILDLLWDVRILPRRFK-HMSRLIKLLVELVVSIFLLELGMLIFWCSIERLCHLLIRGIL-GYLGVSD 78

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 19920378   112 EVYQRWEWAIMGGLMTTLAAMLWINAFEATETTKAER 148
Cdd:pfam16089  79 CTYENYEYWILGLLTTLLSLLLLWIALEATDHPKKLR 115
 
Name Accession Description Interval E-value
DUF4818 pfam16089
Domain of unknown function (DUF4818); This family of proteins is functionally uncharacterized. ...
 32-148 1.28e-39

Domain of unknown function (DUF4818); This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 176 and 214 amino acids in length. There is a single completely conserved residue W that may be functionally important.


Pssm-ID: 465013  Cd Length: 116  Bit Score: 131.56  E-value: 1.28e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19920378    32 PGTIYAGHIAYCAILYFLHDLEILPTRYRsRMGWLTTFLIELVLGVAFMEVLALWLWCSVEHILHLSTQFVLrRYLGVST 111
Cdd:pfam16089   1 PAPLLGSWIFLLAILDLLWDVRILPRRFK-HMSRLIKLLVELVVSIFLLELGMLIFWCSIERLCHLLIRGIL-GYLGVSD 78

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 19920378   112 EVYQRWEWAIMGGLMTTLAAMLWINAFEATETTKAER 148
Cdd:pfam16089  79 CTYENYEYWILGLLTTLLSLLLLWIALEATDHPKKLR 115
 
Name Accession Description Interval E-value
DUF4818 pfam16089
Domain of unknown function (DUF4818); This family of proteins is functionally uncharacterized. ...
 32-148 1.28e-39

Domain of unknown function (DUF4818); This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 176 and 214 amino acids in length. There is a single completely conserved residue W that may be functionally important.


Pssm-ID: 465013  Cd Length: 116  Bit Score: 131.56  E-value: 1.28e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19920378    32 PGTIYAGHIAYCAILYFLHDLEILPTRYRsRMGWLTTFLIELVLGVAFMEVLALWLWCSVEHILHLSTQFVLrRYLGVST 111
Cdd:pfam16089   1 PAPLLGSWIFLLAILDLLWDVRILPRRFK-HMSRLIKLLVELVVSIFLLELGMLIFWCSIERLCHLLIRGIL-GYLGVSD 78

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 19920378   112 EVYQRWEWAIMGGLMTTLAAMLWINAFEATETTKAER 148
Cdd:pfam16089  79 CTYENYEYWILGLLTTLLSLLLLWIALEATDHPKKLR 115
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH