NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|28573698|ref|NP_611465|]
View 

uncharacterized protein Dmel_CG10444 [Drosophila melanogaster]

Protein Classification

sodium:solute symporter( domain architecture ID 10183788)

sodium:solute symporter co-transports Na(+) with a variety of solutes such as sugars, amino acids, inorganic ions or vitamins; similar to uncharacterized Drosophila melanogaster putative sodium-dependent multivitamin transporter and Fopius arisanus solute carrier family 5, member 8 (Slc5a8)

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
SLC5sbd_NIS-SMVT cd11492
Na(+)/iodide (NIS) and Na(+)/multivitamin (SMVT) cotransporters, and related proteins; solute ...
9-531 0e+00

Na(+)/iodide (NIS) and Na(+)/multivitamin (SMVT) cotransporters, and related proteins; solute binding domain; NIS (encoded by the SLC5A5 gene) transports I-, and other anions including ClO4-, SCN-, and Br-. SMVT (encoded by the SLC5A6 gene) transports biotin, pantothenic acid and lipoate. This subfamily also includes SMCT1 and -2. SMCT1(encoded by the SLC5A8 gene) is a high-affinity transporter of various monocarboxylates including lactate and pyruvate, short-chain fatty acids, ketone bodies, nicotinate and its structural analogs, pyroglutamate, benzoate and its derivatives, and iodide. SMCT2 (encoded by the SLC5A12 gene) is a low-affinity transporter for short-chain fatty acids, lactate, pyruvate, and nicotinate. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.


:

Pssm-ID: 271383 [Multi-domain]  Cd Length: 522  Bit Score: 699.24  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   9 WDAAVLITILVISALIGIYYRYTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAY 88
Cdd:cd11492   1 VDYVVFVAMLLISAAIGIYFGFFGGKQKTTEEYLLGGRNMSVFPVALSLIASFISGITLLGTPAEIYYYGTQYWLIVIAY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  89 VLSTPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVIGLV 168
Cdd:cd11492  81 VLVGPITAYIFLPVFYNLQLTSVYEYLELRFNRRVRLLASFLFILQMLLYLPIVIYAPALALSQVTGINLHIIILVVGIV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 169 CTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFAAIWDVAVERGRVNFIEFSLDPTVRHTWWSLIIGGMVT 248
Cdd:cd11492 161 CIFYTTLGGLKAVVWTDVFQVVVMFGGVLAVIILGTIDVGGFSEVWEIAEEGGRLEFFNFDPDPTVRHTFWSLVIGGTFT 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 249 YLSLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYRDCDPLLKGRIDKRDQIMPLFALETMG 328
Cdd:cd11492 241 WLSLYGVNQTQVQRYLSLPSLKSAKKALWLNIVGLILILSLCCFTGLVIYAKYHDCDPLTAGLIKKPDQLLPYFVMDVLG 320
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 329 QYPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDYLKPLYKAIFKrtliDSKSTMPTKIVACIFGLLCIGLAFVAGSMG 408
Cdd:cd11492 321 HLPGLPGLFVAGIFSAALSTLSSGLNSLAAVILEDFIKPFFKKKLS----ERQATNIMKLLVVVFGLLCIGLAFLVEKLG 396
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 409 GVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGFGG---PKPKPVTLEFSTAGCENATAVMAR 485
Cdd:cd11492 397 GVLQLSLSIFGITGGPLLGIFTLGMFFPWANSKGALVGLLVGLIFMLWIGIGGqiaIAPGPLSFPPLPTSTEGCNYTNTT 476
                       490       500       510       520
                ....*....|....*....|....*....|....*....|....*.
gi 28573698 486 AIELSSKSSGVVIEPDYFWLYRISYLWLSVIGFLIAVVVGYFSSIV 531
Cdd:cd11492 477 TITTSTTTTTTEDESEPFPLYRISYLWYSLIGFLITVVVGLIVSLL 522
 
Name Accession Description Interval E-value
SLC5sbd_NIS-SMVT cd11492
Na(+)/iodide (NIS) and Na(+)/multivitamin (SMVT) cotransporters, and related proteins; solute ...
9-531 0e+00

Na(+)/iodide (NIS) and Na(+)/multivitamin (SMVT) cotransporters, and related proteins; solute binding domain; NIS (encoded by the SLC5A5 gene) transports I-, and other anions including ClO4-, SCN-, and Br-. SMVT (encoded by the SLC5A6 gene) transports biotin, pantothenic acid and lipoate. This subfamily also includes SMCT1 and -2. SMCT1(encoded by the SLC5A8 gene) is a high-affinity transporter of various monocarboxylates including lactate and pyruvate, short-chain fatty acids, ketone bodies, nicotinate and its structural analogs, pyroglutamate, benzoate and its derivatives, and iodide. SMCT2 (encoded by the SLC5A12 gene) is a low-affinity transporter for short-chain fatty acids, lactate, pyruvate, and nicotinate. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271383 [Multi-domain]  Cd Length: 522  Bit Score: 699.24  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   9 WDAAVLITILVISALIGIYYRYTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAY 88
Cdd:cd11492   1 VDYVVFVAMLLISAAIGIYFGFFGGKQKTTEEYLLGGRNMSVFPVALSLIASFISGITLLGTPAEIYYYGTQYWLIVIAY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  89 VLSTPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVIGLV 168
Cdd:cd11492  81 VLVGPITAYIFLPVFYNLQLTSVYEYLELRFNRRVRLLASFLFILQMLLYLPIVIYAPALALSQVTGINLHIIILVVGIV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 169 CTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFAAIWDVAVERGRVNFIEFSLDPTVRHTWWSLIIGGMVT 248
Cdd:cd11492 161 CIFYTTLGGLKAVVWTDVFQVVVMFGGVLAVIILGTIDVGGFSEVWEIAEEGGRLEFFNFDPDPTVRHTFWSLVIGGTFT 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 249 YLSLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYRDCDPLLKGRIDKRDQIMPLFALETMG 328
Cdd:cd11492 241 WLSLYGVNQTQVQRYLSLPSLKSAKKALWLNIVGLILILSLCCFTGLVIYAKYHDCDPLTAGLIKKPDQLLPYFVMDVLG 320
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 329 QYPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDYLKPLYKAIFKrtliDSKSTMPTKIVACIFGLLCIGLAFVAGSMG 408
Cdd:cd11492 321 HLPGLPGLFVAGIFSAALSTLSSGLNSLAAVILEDFIKPFFKKKLS----ERQATNIMKLLVVVFGLLCIGLAFLVEKLG 396
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 409 GVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGFGG---PKPKPVTLEFSTAGCENATAVMAR 485
Cdd:cd11492 397 GVLQLSLSIFGITGGPLLGIFTLGMFFPWANSKGALVGLLVGLIFMLWIGIGGqiaIAPGPLSFPPLPTSTEGCNYTNTT 476
                       490       500       510       520
                ....*....|....*....|....*....|....*....|....*.
gi 28573698 486 AIELSSKSSGVVIEPDYFWLYRISYLWLSVIGFLIAVVVGYFSSIV 531
Cdd:cd11492 477 TITTSTTTTTTEDESEPFPLYRISYLWYSLIGFLITVVVGLIVSLL 522
PutP COG0591
Na+/proline symporter [Amino acid transport and metabolism];
6-462 3.12e-81

Na+/proline symporter [Amino acid transport and metabolism];


Pssm-ID: 440356 [Multi-domain]  Cd Length: 476  Bit Score: 262.83  E-value: 3.12e-81
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   6 FDAWDAAVLITILVISALIGIYYRYtggKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVIN 85
Cdd:COG0591   1 MSTLDLIIIILYLLLLLGIGLYASR---RTKSLEDYFLAGRSLGWWVLALSLGATWLSAWTFLGVPGLAYAYGLSALWYA 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  86 IAYVLSTPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVI 165
Cdd:COG0591  78 LGYALGALLLALFFAPRLRRLGALTIPEFLEKRFGRGLRLLAAIIILLFLLGYLAAQLVALGKLLEALFGIPYWLGILIG 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 166 GLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFAAIWDVAVERGRvnfieFSLDPTVRHTWWSLIIGG 245
Cdd:COG0591 158 ALIVLLYTVLGGLRAVAWTDVLQGILMLVGLILLLIVALSALGGFGELFAALPAPGL-----LSLFPGLGFTGWLAFLGL 232
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 246 MVTYLSLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYRDcdpllkGRIDKRDQIMPLFALE 325
Cdd:COG0591 233 FLAIGLGYFGQPHIVQRFLAAKSEKEARKAALIGGLLYLLFYLLAALIGLLARALFPD------LPLADPDLALPLLILE 306
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 326 TMGqyPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDylkpLYKAIFKRTLIDSKSTMPTKIVACIFGLLCIGLAFVAG 405
Cdd:COG0591 307 LLP--PGLAGLLLAAILAAAMSTADSQLLAASSVFTRD----IYKPFIKPKASDKQLLRVSRLAVLVVGLLALLLALLFP 380
                       410       420       430       440       450
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 28573698 406 SMggVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGFGGP 462
Cdd:COG0591 381 SS--ILDLVLLAWGGLGAALLPPLLLGLFWKRATKAGALAGMIAGLVVVLLWKLLGG 435
sss TIGR00813
transporter, SSS family; The Solute:Sodium Symporter (SSS) Family (TC 2.A.21) Members of the ...
44-450 1.07e-77

transporter, SSS family; The Solute:Sodium Symporter (SSS) Family (TC 2.A.21) Members of the SSS family catalyze solute:Na+ symport. The solutes transported may be sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system. Members of the SSS family have been identified in bacteria, archaea and animals, and all functionally well characterized members catalyze solute uptake via Na+ symport. Proteins of the SSS generally share a core of 13 TMSs, but different members of the family may have different numbers of TMSs. A 13 TMS topology with a periplasmic N-terminus and a cytoplasmic C-terminus has been experimentally determined for the proline:Na+ symporter, PutP, of E. coli. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273282 [Multi-domain]  Cd Length: 407  Bit Score: 251.45  E-value: 1.07e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698    44 ADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYVLSTPIAAYFFLPVFYRMRTTSVYEYLERRFG-QA 122
Cdd:TIGR00813   1 AGRSLGGWVVAASLFASYISASQFLGLPGAIYAYGFAIGFYELGALVLLIILGWLFVPIFINNGAYTMPEYLEKRFGkRI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   123 TRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVIGLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAV 202
Cdd:TIGR00813  81 LRGLSVLSLILYIFLYMSVDLFSGALLIELITGLDLYLSLLLLGAITILYTVFGGLKAVVWTDTIQAVIMILGTFILPVF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   203 SAIKAGGFAAIWDVAVERGRVNF-----IEFSLDPTVRHTWWSLIIGGMVTYLSLYGVNQTQVQRLLSVRNLKSAQSALW 277
Cdd:TIGR00813 161 AFSEVGGLGTFVEKASQAAPTNPspddlYDFFRDPSTSDLPWGAGVFGLPHVALWYWTNQVIVQRCLAAKSAKHAKKGCL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   278 WNLPILGMLSFSTIFSGLSIFYYYRDCDPLLKGRID-KRDQIMPLFALETMGqyPGLCGLFVSGIFSASLSTISSAVTSL 356
Cdd:TIGR00813 241 ISGVLKLLPMFGAVLPGLIARALYTDIDPALAGAVNqNSDQAYPLLVQELMP--PGLAGLFLAAILAAVMSTLSSQLNSA 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   357 SAVTLEDylkpLYKAIFKRTLIDSKSTMpTKIVACIFGLLCIGLAFVAGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTT 436
Cdd:TIGR00813 319 STVFTMD----LYKKIIRPNASGEKKIV-MRGRIAVLVAAVIAGFVAAAQGGQVLQYVQEAFGGLGAPFLPVFLLGIFWK 393
                         410
                  ....*....|....
gi 28573698   437 RSNQRGVLLGFLVS 450
Cdd:TIGR00813 394 RMNAKGALAGMIAG 407
PRK10484 PRK10484
putative transporter; Provisional
14-453 9.77e-31

putative transporter; Provisional


Pssm-ID: 236699 [Multi-domain]  Cd Length: 523  Bit Score: 126.15  E-value: 9.77e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   14 LITILVISALIGI--YYRYTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYVLS 91
Cdd:PRK10484   4 ILSFLGFTLLVAVisWWKTRKTDTSSSDGYFLAGRSLTGPVIAGSLLLTNLSTEQLVGLNGQAYASGMSVMAWEVTAAIA 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   92 TPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQ-MVLYMGIALYAPALALEA------VTGIHRSMAI-- 162
Cdd:PRK10484  84 LIILALIFLPRYLKSGITTIPDFLEERYDKTTRRIVSILFLIGyVVSFLPIVLYSGALALNSlfhvseLLGISYGAAIwl 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  163 --VVIGLVCTFYSTLGGLKAVLITDVFQSFLMFAA--IYAVIAVSAIKAGGFAAIWD--VAVERGRVNFIEFSLDPTvrh 236
Cdd:PRK10484 164 lvWLIGIIGAIYAVFGGLKAVAVSDTINGIGLLIGglLVPVFGLIALGDGSFMQGLEqlTTVHPEKLNSIGGATDPV--- 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  237 TWWSLIIGGMVTYLSLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYrdcdpllKGRIDKRD 316
Cdd:PRK10484 241 PFPTLFTGLILVNLFYWCTNQSIVQRALGAKNLAEGQKGALLAAFFKLLGPLILVLPGIIAFHLY-------GDGLPNAD 313
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  317 QIMPLFALETMGQYpgLCGLFVSGIFSASLSTISSAVTslSAVTLedYLKPLYKAIFKRTLIDSKSTMPTKIVACIFGLL 396
Cdd:PRK10484 314 MAYPTLVNDVLPVP--LVGFFAAVLFGAILSTFNGFLN--SASTL--FSLDIYKPIINPNASEKQLVKVGKKFGFVLAII 387
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 28573698  397 CIGLA-FVAGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIV 453
Cdd:PRK10484 388 SMIVApLIANAPQGLYSYLQQLNGIYNVPILAIIIVGFFTKRVPALAAKVALGFGIIL 445
SSF pfam00474
Sodium:solute symporter family; This family includes Swiss:P33413 which is not in the Prosite ...
41-449 6.33e-25

Sodium:solute symporter family; This family includes Swiss:P33413 which is not in the Prosite entry. Membership of this family is supported by a significant blast score.


Pssm-ID: 109527 [Multi-domain]  Cd Length: 406  Bit Score: 107.43  E-value: 6.33e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698    41 YLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYVLSTPIAAYFFLPVFYRMRTTSVYEYLERRFG 120
Cdd:pfam00474   1 YFLAGRSMTGFVNGLSLAASYMSAASFVGLAGAGAASGLAGGLYAIGALVGVWLLLWLFAPRLRNLGAYTMPDYLRKRFG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   121 Q--ATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVIGLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYA 198
Cdd:pfam00474  81 GkrILVYLSALSLLLYFFTYMSVQIVGGARLIELALGLNYYTAVLLLGALTAIYTFFGGFLAVSWTDTIQAVLMLFGTII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   199 VIAVSAIKAGGFAAIWD--VAVERGRVNFI-----EFSLDPTVRHTWWSLIIGGMVtylslygVNQTQVQRLLSVRNLKS 271
Cdd:pfam00474 161 LMIIVFHEVGGYSSAVEkyMTADPNGVDLYtpdglHILRDPLTGLSLWPGLVLGTT-------GLPHILQRCLAAKDAKC 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   272 AQSALWWNLPILGMLSFSTIFSGLSIFYYYRDCDPLLKGRIDKRDQIMPLFALETMGqyPGLCGLFVSGIFSASLSTISS 351
Cdd:pfam00474 234 IRCGVLILTPMFIIVMPGMISRGLFAIALAGANPRACGTVVGCSNIAYPTLAVKLGP--PGLAGIMLAVMLAAIMSTLTS 311
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   352 AVTSLSAVTLEDylkpLYKAIFKRTLIDSKSTM-PTKIVACIFGLLCIGLAFVAGSMgGVLQASLTIFGVVGGPLLAIFT 430
Cdd:pfam00474 312 QLLSSSSAFTHD----LYKNIRRKASATEKELVgRSRIIVLVVISLAILLAVQPAQM-GIAFLVQLAFAGLGSAFLPVIL 386
                         410
                  ....*....|....*....
gi 28573698   431 LGVCTTRSNQRGVLLGFLV 449
Cdd:pfam00474 387 LAIFWKRVNEQGALWGMII 405
 
Name Accession Description Interval E-value
SLC5sbd_NIS-SMVT cd11492
Na(+)/iodide (NIS) and Na(+)/multivitamin (SMVT) cotransporters, and related proteins; solute ...
9-531 0e+00

Na(+)/iodide (NIS) and Na(+)/multivitamin (SMVT) cotransporters, and related proteins; solute binding domain; NIS (encoded by the SLC5A5 gene) transports I-, and other anions including ClO4-, SCN-, and Br-. SMVT (encoded by the SLC5A6 gene) transports biotin, pantothenic acid and lipoate. This subfamily also includes SMCT1 and -2. SMCT1(encoded by the SLC5A8 gene) is a high-affinity transporter of various monocarboxylates including lactate and pyruvate, short-chain fatty acids, ketone bodies, nicotinate and its structural analogs, pyroglutamate, benzoate and its derivatives, and iodide. SMCT2 (encoded by the SLC5A12 gene) is a low-affinity transporter for short-chain fatty acids, lactate, pyruvate, and nicotinate. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271383 [Multi-domain]  Cd Length: 522  Bit Score: 699.24  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   9 WDAAVLITILVISALIGIYYRYTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAY 88
Cdd:cd11492   1 VDYVVFVAMLLISAAIGIYFGFFGGKQKTTEEYLLGGRNMSVFPVALSLIASFISGITLLGTPAEIYYYGTQYWLIVIAY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  89 VLSTPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVIGLV 168
Cdd:cd11492  81 VLVGPITAYIFLPVFYNLQLTSVYEYLELRFNRRVRLLASFLFILQMLLYLPIVIYAPALALSQVTGINLHIIILVVGIV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 169 CTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFAAIWDVAVERGRVNFIEFSLDPTVRHTWWSLIIGGMVT 248
Cdd:cd11492 161 CIFYTTLGGLKAVVWTDVFQVVVMFGGVLAVIILGTIDVGGFSEVWEIAEEGGRLEFFNFDPDPTVRHTFWSLVIGGTFT 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 249 YLSLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYRDCDPLLKGRIDKRDQIMPLFALETMG 328
Cdd:cd11492 241 WLSLYGVNQTQVQRYLSLPSLKSAKKALWLNIVGLILILSLCCFTGLVIYAKYHDCDPLTAGLIKKPDQLLPYFVMDVLG 320
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 329 QYPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDYLKPLYKAIFKrtliDSKSTMPTKIVACIFGLLCIGLAFVAGSMG 408
Cdd:cd11492 321 HLPGLPGLFVAGIFSAALSTLSSGLNSLAAVILEDFIKPFFKKKLS----ERQATNIMKLLVVVFGLLCIGLAFLVEKLG 396
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 409 GVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGFGG---PKPKPVTLEFSTAGCENATAVMAR 485
Cdd:cd11492 397 GVLQLSLSIFGITGGPLLGIFTLGMFFPWANSKGALVGLLVGLIFMLWIGIGGqiaIAPGPLSFPPLPTSTEGCNYTNTT 476
                       490       500       510       520
                ....*....|....*....|....*....|....*....|....*.
gi 28573698 486 AIELSSKSSGVVIEPDYFWLYRISYLWLSVIGFLIAVVVGYFSSIV 531
Cdd:cd11492 477 TITTSTTTTTTEDESEPFPLYRISYLWYSLIGFLITVVVGLIVSLL 522
SLC5sbd_SMVT cd11504
Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain; This ...
6-531 7.28e-157

Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain; This multivitamin transporter SMVT (product of the SLC5A6 gene) transports biotin, pantothenic acid and lipoate, and is essential for mediating biotin uptake into mammalian cells. SMVT is expressed in the placenta, intestine, heart, brain, lung, liver, kidney and pancreas. Biotin may regulate its own cellular uptake through participation in holocarboxylase synthetase-dependent chromatin remodeling events at SMVT promoter loci. The cis regulatory elements, Kruppel-like factor 4 and activator protein-2, regulate the activity of the human SMVT promoter in the intestine. Glycosylation of the hSMVT is important for its transport function. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271394 [Multi-domain]  Cd Length: 527  Bit Score: 459.73  E-value: 7.28e-157
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   6 FDAWDAAVLITILVISALIGIYYRYTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVIN 85
Cdd:cd11504   1 FHVADYVVFSLLLVISAGIGLYYACTGGKQKTTREFLMADRKMGCLPVALSLLATFQSAVAILGGPSESYTFGTQYWFLG 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  86 IAYVLSTPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVI 165
Cdd:cd11504  81 CSYFLGLLIPAHVFIPVFYRLELTSAYEYLELRFNKTVRICGTVTFIFQMVIYMGVVLYAPALALNAVTGFNLWISVLAM 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 166 GLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFAAIWDVAVERGRVNFIEFSLDPTVRHTWWSLIIGG 245
Cdd:cd11504 161 GVVCTFYTALGGLKAVIWTDVFQTVVMFAGQLAVIIVGSIEAGGIARVWRVAAESDRIDGFNLSPDPTIRHTFWTLVVGG 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 246 MVTYLSLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYRDCDPLLKGRIDKRDQIMPLFALE 325
Cdd:cd11504 241 VFNMLALYGVNQAQVQRYLSSRTEKQAKRSCYLVFPGQQLSLCIGCLCGLVMFARYHECDPLKNGIVARSDQLVPYFVMD 320
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 326 TMGQYPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDYLKPLYKaifkrTLIDSKSTMPTKIVACIFGLLCIGLAFVAG 405
Cdd:cd11504 321 VLDGLPGLPGLFIACLFSGALSTISSAFNSLATVTMEDLIVPKFP-----DMTEERATLLSKGLAVGYGLLCLLMAYLAS 395
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 406 SMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGFGGP--KPKPVTLEFSTAGC--ENATA 481
Cdd:cd11504 396 TMGQVLQAANSIFGMIGGPLLGLFCLGMFFPCANSAGAVVGLLAGLFMAFWIGIGSKvfPPYSPTKSTPINDCifPNVTM 475
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|
gi 28573698 482 VMARAIELSSKSSGVVIEPDYFWLYRISYLWLSVIGFLIAVVVGYFSSIV 531
Cdd:cd11504 476 ANATTPTTPFATPTDEPPPGLAELYSLSYMWYSAHNSTTVVVVGLLVSLL 525
SLC5sbd_SMCT cd11505
Na(+)/monocarboxylate cotransporters SMCT1 and 2 and related proteins; solute-binding domain; ...
3-531 9.49e-144

Na(+)/monocarboxylate cotransporters SMCT1 and 2 and related proteins; solute-binding domain; SMCT1 is a high-affinity transporter of various monocarboxylates including lactate and pyruvate, short-chain fatty acids, ketone bodies, nicotinate and its structural analogs, pyroglutamate, benzoate and its derivatives, and iodide. Human SMCT1 (hSMCT1, also called AIT) is encoded by the tumor suppressor gene SLC5A8. SMCT1 is expressed in the colon, small intestine, kidney, thyroid gland, retina, and brain. SMCT1 may contribute to the intestinal/colonic and oral absorption of monocarboxylate drugs. It also mediates iodide transport from thyrocyte into the colloid lumen in thyroid gland and, through transporting L-lactate and ketone bodies, helps maintain the energy status and the function of neurons. SMCT2 is a low-affinity transporter for short-chain fatty acids, lactate, pyruvate, and nicotinate. hSMCT2 is encoded by the SLC5A12 gene. SMCT2 is expressed in the kidney, small intestine, skeletal muscle, and retina. In the kidney, SMCT2 may initiate lactate absorption in the early parts of the tubule, SMCT1 in the latter parts of the tubule. In the retina, SMCT1 and SMCT2 may play a differential role in monocarboxylate transport in a cell type-specific manner. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271395  Cd Length: 538  Bit Score: 426.61  E-value: 9.49e-144
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   3 VGTFDAWDAAVLITILVISALIGIYYRYTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFC 82
Cdd:cd11505   1 IGNFAVWDYVVFAAMLFISAGIGIYYAFAGGGQATSKDFLMGGRQMTAVPVALSLTASFMSAVTVLGTPSEVYRFGASFL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  83 VINIAYVLSTPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAI 162
Cdd:cd11505  81 IFAFAYLFVVLISSEVFLPVFYRLGITSTYEYLELRFNKPVRLAGTVLFIVQTILYTGIVIYAPALALNQVTGFDLWGAV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 163 VVIGLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFAAIWDVAVERGRVNFIEFSLDPTVRHTWWSLI 242
Cdd:cd11505 161 VATGVVCTFYCTLGGLKAVVWTDVFQVGIMVAGFLSVIIQAVVHQGGIHNILNDSYNGSRLNFWDFDPNPLRRHTFWTIT 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 243 IGGMVTYLSLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYRDCDPLLKGRIDKRDQIMPLF 322
Cdd:cd11505 241 VGGTFTWTGIYGVNQSQVQRYISCKTRFQAKLSLYFNLLGLWAILVCAVFSGLAMYSHYKDCDPWTAKIVSAPDQLMPYL 320
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 323 ALETMGQYPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDYLKPLYkaifkRTLIDSKSTMPTKIVACIFGLLCIGLAF 402
Cdd:cd11505 321 VLDILADYPGLPGLFVACAYSGTLSTVSSSINALAAVTVEDLIKPYF-----RSLSEKLSSWISKGLSLLYGAMCIGMAV 395
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 403 VAGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGFGG-----PKPKPVTLEFSTAGC- 476
Cdd:cd11505 396 AASLMGGLLQAALSIFGMVGGPLLGLFSLGILFPFVNSKGALGGLLTGFAISLWVGIGAqiyppPPSKTLPLPLSTDGCn 475
                       490       500       510       520       530       540
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 28573698 477 -----ENATAVMARAIELSSKSSGVVIEPDYF--WlYRISYLWLSVIGFLIAVVVGYFSSIV 531
Cdd:cd11505 476 ktnveANGPPTTEMPFTTSVFQIYLSSRPGLAdtW-YSLSYLYFSTVGTLVCILVGVIVSLI 536
SLC5sbd_SMCT1 cd11519
Na(+)/monocarboxylate cotransporter SMCT1 and related proteins; solute-binding domain; SMCT1 ...
3-535 2.34e-141

Na(+)/monocarboxylate cotransporter SMCT1 and related proteins; solute-binding domain; SMCT1 is a high-affinity transporter of various monocarboxylates including lactate and pyruvate, short-chain fatty acids, ketone bodies, nicotinate and its structural analogs, pyroglutamate, benzoate and its derivatives, and iodide. Human SMCT1 (hSMCT1, also called AIT) is encoded by the tumor suppressor gene SLC5A8. Its expression is under the control of the C/EBP transcription factor. Its tumor-suppressive role is related to uptake of butyrate, propionate, and pyruvate, these latter are inhibitors of histone deacetylases. SMCT1 is expressed in the colon, small intestine, kidney, thyroid gland, retina, and brain. SMCT1 may contribute to the intestinal/colonic and oral absorption of monocarboxylate drugs. SMCT1 also mediates iodide transport from thyrocyte into the colloid lumen in thyroid gland and through transporting l-lactate and ketone bodies helps maintain the energy status and the function of neurons. In the kidney its expression is limited to the S3 segment of the proximal convoluted tubule (in contrast to the low-affinity monocarboxylate transporter SMCT2, belonging to a different family, which is expressed along the entire length of the tubule). In the retina, SMCT1 and SMCT2 may play a differential role in monocarboxylate transport in a cell type-specific manner, SMCT1 is expressed predominantly in retinal neurons and in retinal pigmented epithelial (RPE) cells. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271402  Cd Length: 542  Bit Score: 420.79  E-value: 2.34e-141
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   3 VGTFDAWDAAVLITILVISALIGIYYRYTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFC 82
Cdd:cd11519   1 IGTFSVWDYVVFAGMLLISAGIGIYYAFAGGGQQTSKDFLMGGRQMTAVPVALSLTASFMSAVTVLGTPAEVYRFGAIFS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  83 VINIAYVLSTPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAI 162
Cdd:cd11519  81 IFAFTYAIVVVISAEVFLPVFYRLGITSTYEYLELRFNKCVRLIGTSLFIVQTALYTGIVIYAPALALNQVTGFDLWGAV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 163 VVIGLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFAAIWDVAVERGRVNFIEFSLDPTVRHTWWSLI 242
Cdd:cd11519 161 VATGVVCTFYCTLGGLKAVIWTDVFQVGIMVAGFVSVIIRAVVLQGGIGTILNDSYYGGRLNFWDFDPNPLQRHTFWTIV 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 243 IGGMVTYLSLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYRDCDPLLKGRIDKRDQIMPLF 322
Cdd:cd11519 241 IGGTFTWTSIYGVNQSQVQRYISCKTRFQAKMSLYVNLVGLWAILSCAVLSGLAMYSIYKDCDPWTAKDVSAPDQLMPYL 320
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 323 ALETMGQYPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDYLKPLYKAIFKRTLidsksTMPTKIVACIFGLLCIGLAF 402
Cdd:cd11519 321 VLDILADYPGLPGLFVACAYSGTLSTVSSSINALAAVTVEDLIKPYFRSLSERQL-----SWISMGMSVFYGALCIGMAG 395
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 403 VAGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGFGG----PKP-KPVTLEFSTAGCE 477
Cdd:cd11519 396 LASLMGALLQAALSIFGMVGGPLLGLFALGILFPFANSIGALVGLMSGFAISLWVGIGAqiypPLPeKTLPLPLSLEGCN 475
                       490       500       510       520       530       540
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 28573698 478 NAT-AVMARAIELSSKSSGVVIEPDY------FWlYRISYLWLSVIGFLIAVVVGYFSSIVLAHC 535
Cdd:cd11519 476 STYnETNWTTTPEMPFTSVFTTQPSSrppladNW-YSLSYLYFSTVGTLVTMLVGLLVSLITGGC 539
SLC5sbd_SMCT2 cd11520
Na(+)/monocarboxylate cotransporter SMCT2 and related proteins; solute-binding domain; SMCT2 ...
3-531 2.22e-130

Na(+)/monocarboxylate cotransporter SMCT2 and related proteins; solute-binding domain; SMCT2 is a low-affinity transporter for short-chain fatty acids, lactate, pyruvate, and nicotinate. Human SMCT2 (hSMCT2) is encoded by the SLC5A12 gene. SMCT2 is expressed in the kidney, small intestine, skeletal muscle, and retina. In the kidney, it is expressed in the apical membrane of the proximal convoluted tubule, along the entire length of the tubule (in contrast to the high-affinity monocarboxylate transporter SMCT1, belonging to a different family, which is limited to the S3 segment of the tubule). SMCT2 may initiate lactate absorption in the early parts of the tubule. In the retina, SMCT1 and SMCT2 may play a differential role in monocarboxylate transport in a cell type-specific manner, SMCT2 is expressed exclusively in Muller cells. Nicotine transport by hSMCT2 is inhibited by several non-steroidal anti-inflammatory drugs. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 212089 [Multi-domain]  Cd Length: 529  Bit Score: 391.90  E-value: 2.22e-130
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   3 VGTFDAWDAAVLITILVISALIGIYYRYTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFC 82
Cdd:cd11520   1 VKNFVAWDYVVFAGLFLVSSGIGVFFAIKERKKATSKEFLVGGRQMSCGPVALSLTASFMSAVTVLGTPAEVYRFGASFV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  83 VINIAYVLSTPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAI 162
Cdd:cd11520  81 LFFIAYTFVIIFTSELFLPVFYRSGITSTYEYLELRFNKPVRYAATLIYIVQTILYTGVVVYAPALALNQVTGFDLWGSV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 163 VVIGLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFAAIWDVAVERGRVNFIEFSLDPTVRHTWWSLI 242
Cdd:cd11520 161 FATGIVCTFYCTLGGLKAVVWTDAFQMVVMVVGFLTVLIQGSIHNGGFTNVWETAYNGSRLNIFDFDVDPLRRHTFWTIT 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 243 IGGMVTYLSLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYRDCDPLLKGRIDKRDQIMPLF 322
Cdd:cd11520 241 VGGTFTWLGIYGVNQSTIQRCISCKTEKHAKLALYLNLLGLWIILVCAVFSGLIMYSHYKDCDPWTSGFISAPDQLMPYF 320
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 323 ALETMGQYPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDYLKPLYKAIFKRTlidskSTMPTKIVACIFGLLCIGLAF 402
Cdd:cd11520 321 VMEIFSTMPGLPGLFVACAFSGTLSTVAASINALATVTFEDFVKSCFPHLSEKL-----STWISKGLCILFGVMCTSMAV 395
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 403 VAGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGFG-----GPKPKPVTLEFSTAGC- 476
Cdd:cd11520 396 AASLMGGVVQAALSIHGMCGGPMLGLFTLGIVFPFVNWKGALGGLLTGITLSFWVGIGafiypAPSSKTLPLELSTAGCi 475
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 28573698 477 -ENATAVMARAIELSSKSSGVVIEPdyfWlYRISYLWLSVIGFLIAVVVGYFSSIV 531
Cdd:cd11520 476 lANSTATPTPATPILTSDRPLLADT---W-YSLSYLYYSAVGCLGCIAAGLLISFL 527
SLC5sbd_NIS cd11503
Na(+)/iodide cotransporter NIS and related proteins; solute-binding domain; NIS (product of ...
9-531 1.78e-117

Na(+)/iodide cotransporter NIS and related proteins; solute-binding domain; NIS (product of the SLC5A5 gene) transports I-, and other anions including ClO4-, SCN-, and Br-. NIS is expressed in the thyroid, colon, ovary, and in human breast cancers. It mediates the active transport and the concentration of iodide from the blood into thyroid follicular cells, a fundamental step in thyroid hormone biosynthesis, and is the basis of radioiodine therapy for thyroid cancer. Mutation in the SLC5A5 gene can result in a form of thyroid hormone dysgenesis. Human NIS exists mainly as a dimer stabilized by a disulfide bridge. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271393  Cd Length: 535  Bit Score: 359.16  E-value: 1.78e-117
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   9 WDAAVLITILVISALIGIYYRYTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAY 88
Cdd:cd11503   1 WDYGVFAAMLLVSTGIGLFVGLARGGQRSADDFFTGGRGLSAVPVGLSLSASFMSAVQVLGVPSEAYRYGLKFLWMCLGQ 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  89 VLSTPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVIGLV 168
Cdd:cd11503  81 LLNSLMTAVLFMPVFYRLGITSTYQYLEMRFSRAVRLCGTLQFIVATMLYTGIVIYAPALILNQVTGLDIWASLFSTGII 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 169 CTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFAAIWDVAVERGRVNFIEFSLDPTVRHTWWSLIIGGMVT 248
Cdd:cd11503 161 CTFYTTVGGMKAVIWTDVFQVVVMLSGFWAVLIRGVILVGGPRRVLEIAQNHSRINFMDFDPDPRRRYTFWTFVVGGTLV 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 249 YLSLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYRDCDPLLKGRIDKRDQIMPLFALETMG 328
Cdd:cd11503 241 WLSMYGVNQAQVQRYVACRTEKQAKLALLVNQVGLCLIVSSAATCGIVMFVYYSNCDPLLIGRISAPDQYMPYLVLDIFE 320
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 329 QYPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDYLKPLYKAIFKRtlidsKSTMPTKIVACIFGLLCIGLAFVAGSMG 408
Cdd:cd11503 321 DLPGVPGLFLACAYSGTLSTASTSINAMAAVTVEDLIKPRLPTIAPR-----KLVFISKGLSLIYGSACITVAALSSLLG 395
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 409 -GVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGFGG----PKPKPV-TLEFSTAGCENATAV 482
Cdd:cd11503 396 gGVLQGSFTVMGVISGPLLGAFALGMFLPACNTPGVFSGLAVGLALSLWVAVGAtiypPSEQTMgVLPTSAAQCLTTNVT 475
                       490       500       510       520
                ....*....|....*....|....*....|....*....|....*....
gi 28573698 483 MARAieLSSKSSGVVIEPDYFWLYRISYLWLSVIGFLIAVVVGYFSSIV 531
Cdd:cd11503 476 LNTT--GSVNASSVPPSSGMDNIRPALADYFYALSYLYYGAVGTLTTYI 522
SLC5sbd_NIS-like_u3 cd11495
uncharacterized subgroup of the Na(+)/iodide (NIS) cotransporter subfamily; putative ...
6-531 5.34e-92

uncharacterized subgroup of the Na(+)/iodide (NIS) cotransporter subfamily; putative solute-binding domain; Proteins belonging to the same subfamily as this uncharacterized subgroup include i) NIS, which transports I-, and other anions including ClO4-, SCN-, and Br-, ii) SMVT, which transports biotin, pantothenic acid and lipoate, and iii) the Na(+)/monocarboxylate cotransporters SMCT1 and 2. SMCT1 is a high-affinity transporter while SMCT2 is a low-affinity transporter. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271386 [Multi-domain]  Cd Length: 473  Bit Score: 290.98  E-value: 5.34e-92
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   6 FDAWDAAVLITILVISALIGIYYRytgGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVIN 85
Cdd:cd11495   1 FGWLDYLVLVIYLLAMLGIGLYFS---KKQKSTDDYFKGGGRIPWWAAGLSIFATTLSSITFLAIPGKAYATDWNYFVGS 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  86 IAYVLSTPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVI 165
Cdd:cd11495  78 LSIIIAAPLAAYFFVPFFRRLNVTSAYEYLEKRFGPWARVYGSLLFILFQLGRMGIVLYLPALALSAVTGINPYIIIILM 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 166 GLVCTFYSTLGGLKAVLITDVFQSFLMF--AAIYAVIAVSAIKaGGFAAIWDVAVERGRVNFIEFSLDPTvRHTWWSLII 243
Cdd:cd11495 158 GVLCIIYTVLGGIEAVIWTDVIQGVVLLggALLCLIILLFSIP-GGFGEVFDIAIANGKFSLGDFSFSLT-ESTIWVIFI 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 244 GGMVTYLSLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYRDCDPLLKGrIDKRDQIMPLFA 323
Cdd:cd11495 236 GGIFNNLQSYTSDQDVVQRYLTTKSIKEAKKSLWTNALLALPVALLFFGIGTALYVFYQQHPELLPA-GINGDAVFPYFI 314
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 324 LETMGQypGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDYLKPLYKaifkrTLIDSKSTMPTKIVACIFGLL--CIGLA 401
Cdd:cd11495 315 VTQLPV--GVAGLIIAAIFAAAMSTISSSLNSVATCITTDFYKRLSP-----DPSDKQYLKVARLITLLVGLLgtLVALY 387
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 402 FVAGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGFGGPKpkpvtlefstagcenata 481
Cdd:cd11495 388 LANAGVKSLLDAFNTLTGLFGGGLAGLFLLGIFTKRANAKGALVGIIVSIIVIFWISLLYTP------------------ 449
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|
gi 28573698 482 vmaraielsskssgvviepdyfwlyrISYLWLSVIGFLIAVVVGYFSSIV 531
Cdd:cd11495 450 --------------------------IHFFLYSVIGTLVCFVVGYVVSLL 473
SLC5sbd_NIS-like_u2 cd11494
uncharacterized subgroup of the Na(+)/iodide (NIS) cotransporter subfamily; putative ...
10-526 3.80e-90

uncharacterized subgroup of the Na(+)/iodide (NIS) cotransporter subfamily; putative solute-binding domain; Proteins belonging to the same subfamily as this uncharacterized subgroup include i) NIS, which transports I-, and other anions including ClO4-, SCN-, and Br-, ii) SMVT, which transports biotin, pantothenic acid and lipoate, and iii) the Na(+)/monocarboxylate cotransporters, SMCT1 and 2. SMCT1 is a high-affinity transporter while SMCT2 is a low-affinity transporter. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271385 [Multi-domain]  Cd Length: 473  Bit Score: 286.03  E-value: 3.80e-90
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  10 DAAVLITILVISALIGIYYRYtggKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYV 89
Cdd:cd11494   2 DWIVLVGYLLGILVYGVYKGR---GQKNQEDYFLGGRSMPWWPIGLSIMATQASAITFLSAPGQAYSDGMRFVQYYFGLP 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  90 LSTPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVIGLVC 169
Cdd:cd11494  79 LAMIFLCITFVPVFYKLKVYTAYEYLERRFGLKTRLLTSILFLISRGLATGVTIYAPAIILSTILGWSLWLTILLIGGIT 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 170 TFYSTLGGLKAVLITDVFQSFLMFAAIYA--VIAVSAIKAGGFAAIwDVAVERGRVNFIEFSLDPTVRHTWWSLIIGGMV 247
Cdd:cd11494 159 IIYTVLGGIKAVIWTDVIQMVIIWAGLFIafGLLLKLLPVGFVDAL-LVAGKSGRLNALDFSFDLSDTYTFWSGLIGGFF 237
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 248 TYLSLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYRDCDPLL-----KGRIDKRDQIMPLF 322
Cdd:cd11494 238 LYLSYFGTDQSQVQRYLTAKSIKEARKSLLLNGFLKFPMQFFILLIGVLVFVFYQFNPFPVsfnpaEDETKDTNYIFLRF 317
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 323 ALETMGqyPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDYlkplYKAIFKRTLIDSKSTMPTKIVACIFGLLCIGLAF 402
Cdd:cd11494 318 VLNYLP--PGVIGLLIAAIFAAAMSSIDSALNSLATVTVIDI----YRRFFKKDASDEHYLKVSRLLTVFWGLLAIVFAL 391
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 403 VAGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGfggpkpkpvtlefstagcenatav 482
Cdd:cd11494 392 FAGLAGSLIEAVNKLGSLFYGPILGVFLLAFFTKKANGKGVFAGAILGVIVVIVLW------------------------ 447
                       490       500       510       520
                ....*....|....*....|....*....|....*....|....
gi 28573698 483 maraielsskssgvviepdyfWLYRISYLWLSVIGFLIAVVVGY 526
Cdd:cd11494 448 ---------------------LFPDVSWLWWNVIGCVVVIGVAL 470
SLC5sbd_NIS-like cd10326
Na(+)/iodide (NIS) and Na(+)/multivitamin (SMVT) cotransporters, and related proteins; solute ...
10-461 3.35e-86

Na(+)/iodide (NIS) and Na(+)/multivitamin (SMVT) cotransporters, and related proteins; solute binding domain; NIS (product of the SLC5A5 gene) transports I-, and other anions including ClO4-, SCN-, and Br-. SMVT (product of the SLC5A6 gene) transports biotin, pantothenic acid and lipoate. This subfamily also includes SMCT1 and 2. SMCT1(the product of the SLC5A8 gene) is a high-affinity transporter of various monocarboxylates including lactate and pyruvate, short-chain fatty acids, ketone bodies, nicotinate and its structural analogs, pyroglutamate, benzoate and its derivatives, and iodide. SMCT2 (product of the SLC5A12 gene) is a low-affinity transporter for short-chain fatty acids, lactate, pyruvate, and nicotinate. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271361 [Multi-domain]  Cd Length: 472  Bit Score: 275.98  E-value: 3.35e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  10 DAAVLITILVISALIGIYyryTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYV 89
Cdd:cd10326   1 DWAVVVVYFLILLAISYY---TSRRNADNDDFFLGNRQSPWYLVAFSMIGTSLSGVTFVSVPGEVGGSGFTYLQMVLGFL 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  90 LSTPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHR----SMAIVVI 165
Cdd:cd10326  78 LGYLIIAFVLLPLYYRLNLTSIYEYLEDRFGVSSRKTGAVFFLLSRILGAGIRLYLVALVLQQFLFDSLgipfWLTVLIT 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 166 GLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVI-AVSAIKAGGFAAIWDVAVERGRVNFIEFSLDPTvRHTWWSLIIG 244
Cdd:cd10326 158 GLLIWLYTFRGGIKTVVWTDTLQTVFLLVGLVLTIiIISNSLGLGFGEAISAAGESGYSRIFNFDDDNS-RRTFWKQFLG 236
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 245 GMVTYLSLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYRDCDPLLKGRIDkrDQIMPLFAL 324
Cdd:cd10326 237 GIFITIAMTGLDQDMMQRNLSCKNLKDAQKNMLTFGVILVPVNLLFLLLGVLLYTYAQKNGIALPAKDS--DQLFPYFAL 314
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 325 ETMGqyPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDYLKPLYKAIFKRTLidSKSTMPTKIVACIFGLLCIGLAFVA 404
Cdd:cd10326 315 NGLP--PGVSGLFVAGIIAAAMSSADSALTALTTSFCVDILNRFKRKSEKKSE--RKYVHIAFSLTFVLGILVFGSASNS 390
                       410       420       430       440       450       460
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 28573698 405 GSmggVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQR------GVLLGFLVSLIVSFWMGFGG 461
Cdd:cd10326 391 GS---LIDAIFKVAGYTYGPLLGLFAFGLFTKRAVKDkwvplvGLLAPVLSYLLVSNSEGFFG 450
PutP COG0591
Na+/proline symporter [Amino acid transport and metabolism];
6-462 3.12e-81

Na+/proline symporter [Amino acid transport and metabolism];


Pssm-ID: 440356 [Multi-domain]  Cd Length: 476  Bit Score: 262.83  E-value: 3.12e-81
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   6 FDAWDAAVLITILVISALIGIYYRYtggKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVIN 85
Cdd:COG0591   1 MSTLDLIIIILYLLLLLGIGLYASR---RTKSLEDYFLAGRSLGWWVLALSLGATWLSAWTFLGVPGLAYAYGLSALWYA 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  86 IAYVLSTPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVI 165
Cdd:COG0591  78 LGYALGALLLALFFAPRLRRLGALTIPEFLEKRFGRGLRLLAAIIILLFLLGYLAAQLVALGKLLEALFGIPYWLGILIG 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 166 GLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFAAIWDVAVERGRvnfieFSLDPTVRHTWWSLIIGG 245
Cdd:COG0591 158 ALIVLLYTVLGGLRAVAWTDVLQGILMLVGLILLLIVALSALGGFGELFAALPAPGL-----LSLFPGLGFTGWLAFLGL 232
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 246 MVTYLSLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYRDcdpllkGRIDKRDQIMPLFALE 325
Cdd:COG0591 233 FLAIGLGYFGQPHIVQRFLAAKSEKEARKAALIGGLLYLLFYLLAALIGLLARALFPD------LPLADPDLALPLLILE 306
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 326 TMGqyPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDylkpLYKAIFKRTLIDSKSTMPTKIVACIFGLLCIGLAFVAG 405
Cdd:COG0591 307 LLP--PGLAGLLLAAILAAAMSTADSQLLAASSVFTRD----IYKPFIKPKASDKQLLRVSRLAVLVVGLLALLLALLFP 380
                       410       420       430       440       450
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 28573698 406 SMggVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGFGGP 462
Cdd:COG0591 381 SS--ILDLVLLAWGGLGAALLPPLLLGLFWKRATKAGALAGMIAGLVVVLLWKLLGG 435
sss TIGR00813
transporter, SSS family; The Solute:Sodium Symporter (SSS) Family (TC 2.A.21) Members of the ...
44-450 1.07e-77

transporter, SSS family; The Solute:Sodium Symporter (SSS) Family (TC 2.A.21) Members of the SSS family catalyze solute:Na+ symport. The solutes transported may be sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system. Members of the SSS family have been identified in bacteria, archaea and animals, and all functionally well characterized members catalyze solute uptake via Na+ symport. Proteins of the SSS generally share a core of 13 TMSs, but different members of the family may have different numbers of TMSs. A 13 TMS topology with a periplasmic N-terminus and a cytoplasmic C-terminus has been experimentally determined for the proline:Na+ symporter, PutP, of E. coli. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273282 [Multi-domain]  Cd Length: 407  Bit Score: 251.45  E-value: 1.07e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698    44 ADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYVLSTPIAAYFFLPVFYRMRTTSVYEYLERRFG-QA 122
Cdd:TIGR00813   1 AGRSLGGWVVAASLFASYISASQFLGLPGAIYAYGFAIGFYELGALVLLIILGWLFVPIFINNGAYTMPEYLEKRFGkRI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   123 TRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVIGLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAV 202
Cdd:TIGR00813  81 LRGLSVLSLILYIFLYMSVDLFSGALLIELITGLDLYLSLLLLGAITILYTVFGGLKAVVWTDTIQAVIMILGTFILPVF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   203 SAIKAGGFAAIWDVAVERGRVNF-----IEFSLDPTVRHTWWSLIIGGMVTYLSLYGVNQTQVQRLLSVRNLKSAQSALW 277
Cdd:TIGR00813 161 AFSEVGGLGTFVEKASQAAPTNPspddlYDFFRDPSTSDLPWGAGVFGLPHVALWYWTNQVIVQRCLAAKSAKHAKKGCL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   278 WNLPILGMLSFSTIFSGLSIFYYYRDCDPLLKGRID-KRDQIMPLFALETMGqyPGLCGLFVSGIFSASLSTISSAVTSL 356
Cdd:TIGR00813 241 ISGVLKLLPMFGAVLPGLIARALYTDIDPALAGAVNqNSDQAYPLLVQELMP--PGLAGLFLAAILAAVMSTLSSQLNSA 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   357 SAVTLEDylkpLYKAIFKRTLIDSKSTMpTKIVACIFGLLCIGLAFVAGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTT 436
Cdd:TIGR00813 319 STVFTMD----LYKKIIRPNASGEKKIV-MRGRIAVLVAAVIAGFVAAAQGGQVLQYVQEAFGGLGAPFLPVFLLGIFWK 393
                         410
                  ....*....|....
gi 28573698   437 RSNQRGVLLGFLVS 450
Cdd:TIGR00813 394 RMNAKGALAGMIAG 407
SLC5sbd_NIS-like_u1 cd11493
uncharacterized subgroup of the Na(+)/iodide (NIS) cotransporter subfamily; putative ...
10-460 7.23e-73

uncharacterized subgroup of the Na(+)/iodide (NIS) cotransporter subfamily; putative solute-binding domain; Proteins belonging to the same subfamily as this uncharacterized subgroup include i) NIS, which transports I-, and other anions including ClO4-, SCN-, and Br-, ii) SMVT, which transports biotin, pantothenic acid and lipoate, and iii) the Na(+)/monocarboxylate cotransporters SMCT1 and 2. SMCT1 is a high-affinity transporter while SMCT2 is a low-affinity transporter. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271384 [Multi-domain]  Cd Length: 479  Bit Score: 240.96  E-value: 7.23e-73
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  10 DAAVLITILVISALIGIYYrytGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYV 89
Cdd:cd11493   1 DLAVIVLYLLGLPLLGLWL---SGRQKSTADYFLGGRSMPWWAVCLSVVATETSTLTFLSIPGLAYGGDLTFLQLALGYI 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  90 LSTPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTG-----IHRSMAIVV 164
Cdd:cd11493  78 LGRIIVAFVLLPRYFRGEVVSAYELLGQRFGGGMQKTASVTFLVTRLLADGVRLFAAAIPVSMILGadgvaLSYIASILI 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 165 IGLVCTFYSTLGGLKAVLITDVFQSFL-MFAAIYAVIAVSAIKAGGFAAIWDVAVERGRVNFIEFSLDPTVRHTWWSLII 243
Cdd:cd11493 158 ISVVTLLYTYFGGIRAVVWTDVIQLVVyIGGAVAALAYLLGALPADWLQIAAAAGKFHLFDLSDLILGLTSPYTFWAAII 237
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 244 GGMVTYLSLYGVNQTQVQRLLSVRNLKSAQSALWWN--LPILGMLSFSTIFSGLSIFYyyrDCDPLLKGRIDKRDQIMPL 321
Cdd:cd11493 238 GGALLSMASHGTDQLMVQRLLACRNLRDAQKALIGSgvVVFPQFALFLLIGLLLYVYY---GGASLAALGLGSPDEVFPY 314
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 322 FALETMGqyPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDylkpLYKAIFKRTLIDSKSTMPTKIVACIFGLLCIGLA 401
Cdd:cd11493 315 FIVHELP--AGLRGLLIAGILAAAMSTLSSALNSLASSTVQD----LYQPWKRRRLSDEKLLRASRLLTLVWAVVLVGIA 388
                       410       420       430       440       450       460
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 402 -FVAGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGFG 460
Cdd:cd11493 389 lLFQYTDQPVVELGLSIASFTYGGLLGVFLLGLLTRRASQRDAIAAFIVGFLVMLLLIFG 448
YidK COG4146
Uncharacterized membrane permease YidK, sodium:solute symporter family [General function ...
5-455 4.44e-63

Uncharacterized membrane permease YidK, sodium:solute symporter family [General function prediction only];


Pssm-ID: 443317 [Multi-domain]  Cd Length: 444  Bit Score: 214.24  E-value: 4.44e-63
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   5 TFDAWDAAVLITILVISALIGiYYRYTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGtifcVI 84
Cdd:COG4146   2 GLSTLDYIVFLLYFLLVAGIG-YWVSRKKKEKTSEDYFLAGRSLTWWVIGASLIATNISAEQLIGLNGSGYATG----LA 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  85 NIAYVLSTPIA----AYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVL-YMGIALYAPALALEAVTGIHRS 159
Cdd:COG4146  77 VAAYEWMAAIAliilALFFLPFYLKSGIYTMPEFLEKRYDRRTRTILSILFLVSYVFvNLPSVLYAGALALNTIFGVPLW 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 160 MAIVVIGLVCTFYSTLGGLKAVLITDVFQSFLMF--AAIYAVIAVSAIKAGGFAAIWD--VAVERGRVNFIEFSLDPTVr 235
Cdd:COG4146 157 ISVIGLGIIAGIYTIFGGLKAVAYTDVIQGIGLIigGLLITVLGLDAVGDGSVLAGWSalLKVPPEKFNMIGPADDPDL- 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 236 hTWWSLIIGGMVTYLSLYGVNQTQVQRLLSVRNLKSAQSAL----WWNLPILGMLsfstIFSGLSIFYYYrdcdpllKGR 311
Cdd:COG4146 236 -PWLGIFTGMPILNLFYWGTNQYIVQRALGAKNLKEAQKGVlfagFLKLLIPFIV----VLPGIIAFVLF-------PDG 303
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 312 IDKRDQIMPLFALETMGqyPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDylkpLYKAIFKRTLIDSKSTMPTKIVAC 391
Cdd:COG4146 304 LDNPDQAYPTLVKNLLP--VGLKGLVAAALFAAIMSSLASALNSSSTLFTLD----IYKKYFNPNASEKQLVKVGRIATV 377
                       410       420       430       440       450       460
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 28573698 392 IFGLLCIGLAFVAGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSF 455
Cdd:COG4146 378 VLAVIAILIAPLIGNADGLFQYIQEVTGFFSPPILAVFLLGLFWKRVTAKAAKVALIAGIVLSI 441
SLC5sbd cd10322
Solute carrier 5 family, sodium/glucose transporters and related proteins; solute-binding ...
9-464 3.48e-61

Solute carrier 5 family, sodium/glucose transporters and related proteins; solute-binding domain; This family represents the solute-binding domain of SLC5 proteins (also called the sodium/glucose cotransporter family or solute sodium symporter family) that co-transport Na+ with sugars, amino acids, inorganic ions or vitamins. Family members include: the human glucose (SGLT1, 2, 4, 5), chiro-inositol (SGLT5), myo-inositol (SMIT), choline (CHT), iodide (NIS), multivitamin (SMVT), and monocarboxylate (SMCT) cotransporters, as well as Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. Vibrio parahaemolyticus Na(+)/galactose cotransporter (vSGLT) has 13 transmembrane helices (TMs): TM-1, an inverted topology repeat: TMs1-5 and TMs6-10, and TMs 11-12 (TMs numbered to conform to the solute carrier 6 family Aquifex aeolicus LeuT). One member of this family, human SGLT3, has been characterized as a glucose sensor and not a transporter. Members of this family are important in human physiology and disease.


Pssm-ID: 271357 [Multi-domain]  Cd Length: 454  Bit Score: 209.33  E-value: 3.48e-61
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   9 WDAAVLITILVISALIGIYYRytgGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAY 88
Cdd:cd10322   1 IDLIIVVVYLALLLGIGLYAS---KKVKSSEDFFLAGRSLGPWLLAGTLAATWISAGSFVGVAGLAYTYGLSAIWYILGA 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  89 VLSTPIAAYFFLPVFYRM-RTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVIGL 167
Cdd:cd10322  78 ALGALLLALFLAPRLRRLgKTTIPETILERYYSKGLRLLVAIIIIIALIPYLALQLIGGGYILSTLLGIPYTVAVIIAAV 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 168 VCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAG--GFAAIWDVAVErgrvnfiEFSLDPTVRHTWWSLIIGG 245
Cdd:cd10322 158 IVILYTVFGGMRAVAWTDVIQGIVMLIGVLVAAIFILSKVGggGFSALAAALPA-------LLLALGPGGGLGWSTILSL 230
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 246 MVTYLSLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYRDcdpllkgrIDKRDQIMPLFALE 325
Cdd:cd10322 231 ILLTGLGVLALPQVFQRILAAKDEKTARRAFLLAGLLLLLIGFLVALIGLAARALFPD--------LENPDLALPTLINS 302
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 326 TMgqYPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDylkpLYKAIFKRTLIDSKSTMPTKIVACIFGLLCIGLAFvag 405
Cdd:cd10322 303 LL--PPGLAGLVLAGLLAAAMSTADSLLLAASTLFTRD----IYKPLINPKASDKKLLRVSRIAVVVVGVLALLLAL--- 373
                       410       420       430       440       450
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 28573698 406 SMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGFGGPKP 464
Cdd:cd10322 374 LPPSILLLLSLAAGLLAAALFPPLLGGLFWKRATKAGAIAGIIVGLIVTLVWLLLPLAS 432
SLC5sbd_u2 cd11478
Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain; SLC5 ...
14-449 2.56e-43

Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain; SLC5 (also called the sodium/glucose cotransporter family or solute sodium symporter family) is a family of proteins that co-transports Na+ with sugars, amino acids, inorganic ions or vitamins. Prokaryotic members of this family include Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. One member of the SLC5 family, human SGLT3, has been characterized as a glucose sensor and not a transporter. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271372  Cd Length: 496  Bit Score: 161.69  E-value: 2.56e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  14 LITILVISALIGIYYrYTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGtiFCVINIAYVLSTP 93
Cdd:cd11478   4 LIVAVYFVFVLGIGF-YLKRKVKTSEDFFLSGRSLPAWITGLAFISANLGALEIVGMSANGAQYG--IATVHFYWIGAIP 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  94 ---IAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVIGLVCT 170
Cdd:cd11478  81 amvFLGIVMMPFYYGSKVRSVPEYLKLRFNKSTRLLNAVSFAVMTILMSGINLYALALVLNVLLGWPLWLSIILSAAIVL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 171 FYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFAAIWDVAVERGRVNFIEFSLDPTVRHT------WWSLIIG 244
Cdd:cd11478 161 AYTTLGGLTSAIYNEVLQFFLIVAGLIPLVIIGLIKVGGWDGLSEKIDANGPPGWNGLSWGPQGSQStnpmgvNLGLVFG 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 245 -GMVTYLSLYGVNQTQVQRLLSVRNLKSAQSAlwwnlPILG-----MLSFSTIFSGLSIFYYYRDcdpLLKGRIDKRDQI 318
Cdd:cd11478 241 lGFVLSFGYWTTNFLEVQRAMAAKDLSAARRT-----PLIAafpkmFIPFLVILPGLIALVLVPE---LGASGGLDYNQA 312
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 319 MPLFaletMGQY--PGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDylkpLYKAIFKRTLIDSKSTMPTKIVACIFGLL 396
Cdd:cd11478 313 LPYL----MAKYlpPGLLGLGITALLAAFMSGMAGNVSAFNTVFTYD----IYQTYIVKDAPDKHYLKVGRIATVVGVLI 384
                       410       420       430       440       450
                ....*....|....*....|....*....|....*....|....*....|...
gi 28573698 397 CIGLAFVAGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLV 449
Cdd:cd11478 385 SIGTAYIASSFNNIMDYLQLLFSFFNAPLFATFLLGMFWKRATPWGGFWGLLA 437
SLC5sbd_u1 cd11477
Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain; SLC5 ...
10-476 1.09e-40

Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain; SLC5 (also called the sodium/glucose cotransporter family or solute sodium symporter family) is a family of proteins that co-transports Na+ with sugars, amino acids, inorganic ions or vitamins. Prokaryotic members of this family include Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. One member of the SLC5 family, human SGLT3, has been characterized as a glucose sensor and not a transporter. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271371  Cd Length: 493  Bit Score: 154.28  E-value: 1.09e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  10 DAAVLITILVISALIGIYYRytGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFG----TIFCVIN 85
Cdd:cd11477   2 DWLVIALYFLLMLGIGLWFS--KRASKSTSDFFLGGRKLPWWLAGISMAATTFSADTFVAVAGIAYTYGiagnWIWWLWA 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  86 IAYVlstpIAAYFFLPVFYRMR--TT--SVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGI-HRSM 160
Cdd:cd11477  80 VAGL----IGAFVFARRWRRLRvlTDgeFPEERYGGRYGAPLRQFYAVYFALLSNVDILAWVFLAAIKVSAVFGPwDPWL 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 161 AIVVIGLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFAAIWDVAVErGRVNFIEFSLDPTVRHTWWS 240
Cdd:cd11477 156 TILILGLITLIYTVIGGLWAVVVTDVVQFVIAMAASIAVAVLALNAVGGPGGLFAQLPE-GHLDLFGSGLGASGFYITFF 234
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 241 LIIGGMVTYLSLYGVNQTQVQRLLSVRNLKSAQSALWWNL------PILGMLsfsTIFSGLSIFyyyrdcdPLLKGRIDK 314
Cdd:cd11477 235 FILFFGWYPLSYSGGGWYLAQRYLSAKSEKAAKAAAWLFAalylvrPWPWML---PALAALVLY-------PDLDDPEAD 304
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 315 RDQIMPLFALETMGqyPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDylkpLYKAIFKRTLIDSKSTMPTKIVACIFG 394
Cdd:cd11477 305 FELAYPMMIKEYLP--AGLLGLVLAGLLAATMSTVSTHLNWGAAYLVND----IYKRFIKPNASEKHLLKVGRLATVLFG 378
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 395 LLCIGLAFVAGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGFGGPKPK-----PVTL 469
Cdd:cd11477 379 LLSIVVALASDSIGGAFWIVLALGAGLGGPLILPWLWWRFNAWTEIWAMIASIIVGLVVSVLLKVFGLPEDflfsfLVPV 458

                ....*..
gi 28573698 470 EFSTAGC 476
Cdd:cd11477 459 LLSLVVW 465
SLC5sbd_PutP cd11475
Na(+)/proline cotransporter PutP and related proteins; solute binding domain; Escherichia coli ...
11-455 2.01e-35

Na(+)/proline cotransporter PutP and related proteins; solute binding domain; Escherichia coli PutP catalyzes the Na+-coupled uptake of proline with a stoichiometry of 1:1. The putP gene is part of the put operon; this operon in addition encodes a proline dehydrogenase, allowing the use of proline as a source of nitrogen and/or carbon. This subfamily also includes the Bacillus subtilis Na+/proline cotransporter (OpuE) which has an osmoprotective instead of catabolic role. Expression of the opuE gene is under osmotic control and different sigma factors contribute to its regulation; it is also a putative CcpA-activated gene. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271369  Cd Length: 464  Bit Score: 138.80  E-value: 2.01e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  11 AAVLITILVISALIGIYYrytGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYVL 90
Cdd:cd11475   1 LITFIVYLLLMLGIGIYS---YRKTKTLEDYFLGGRSLGPWVTALSAGASDMSGWLLLGLPGAAYASGLSAIWIAIGLIL 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  91 STPIAAYFFLPvfyRMRT-------TSVYEYLERRFGQAT---RLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSM 160
Cdd:cd11475  78 GAYLNWLFVAK---RLRRytekndsITLPDYLENRFRDKSkllRILSALIILIFFTIYAAAQLVAGGKLFESLFGIDYST 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 161 AIVVIGLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFAAIWD--VAVERGRVNFIEFSLDPtvrhTW 238
Cdd:cd11475 155 GLLIGAVVVVAYTFLGGFLAVSWTDFFQGLLMLLALVLVPIVALAALGGLSGLVAalAAIDPGLLSPFGGDLGA----GG 230
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 239 WSLIIGGMVTYLSLYGvnQTQV-QRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYRDcdpllkGRIDKRDQ 317
Cdd:cd11475 231 LLAIISLLAWGLGYFG--QPHIlVRFMAIRSPKEIKKARRIAMVWMILFLLGAVLVGLLGRALFPD------GLLGDPET 302
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 318 IMPLFALETMGqyPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDylkpLYKAIFKRTLIDSKSTMPTKIVACIFGLLC 397
Cdd:cd11475 303 VFPVLAQELFP--PWLAGILLAAILAAIMSTADSQLLVCSSALTED----LYKAFLRKEASDKELVWVSRLAVLVIALIA 376
                       410       420       430       440       450       460
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 28573698 398 IGLAFVAGSmggvlqaslTIFGVVG----------GPLLAiftLGVCTTRSNQRGVLLGFLVSLIVSF 455
Cdd:cd11475 377 LLIALNPPS---------SVFSLVSfawaglgaafGPLLL---LSLYWKRTTRQGALAGMIAGAVTVV 432
SLC5sbd_SGLT1-like cd10329
Na(+)/glucose cotransporter SGLT1 and related proteins; solute binding domain; This subfamily ...
12-453 9.35e-34

Na(+)/glucose cotransporter SGLT1 and related proteins; solute binding domain; This subfamily includes the solute-binding domain of SGLT proteins that cotransport Na+ with various solutes. Its members include: the human glucose (SGLT1, -2, -4, -5 ), chiro-inositol (SGLT5), and myo-inositol (SMIT) cotransporters. It also includes human SGLT3 which has been characterized as a glucose sensor and not a transporter. It belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271363  Cd Length: 538  Bit Score: 135.01  E-value: 9.35e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  12 AVLITILVISALIGIYYRYTggKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLM---------GVSNESYEFGTIFC 82
Cdd:cd10329   2 VIIAVYFVAVIAIGLWSSRK--KRSTVSGYFLAGRSMGWPVIGASLFASNIGSSHLVglagsgaasGIAVGNYEWNAAFV 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  83 VIniayvlstpIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVL-YMGIALYAPALALEAVTGIHRSMA 161
Cdd:cd10329  80 LL---------LLGWVFLPFYIRSGVSTMPEFLEKRFGGRSRVYLSVLSLILYVFtKISVDLYAGALVIKQLLGWDLYLS 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 162 IVVIGLVCTFYSTLGGLKAVLITDVFQSFLMF--AAIYAVIAVSAIkAGGFAAIWDVAVERGRVNFIEFSLDPTVrhTWW 239
Cdd:cd10329 151 IIVLLVITAIYTIAGGLKAVIYTDTLQAVILIigSAILMFLAFNEV-GGGWSAYMAAIPSGTAFHLFRPPDDPDL--PWP 227
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 240 SLIIGGMVTYLSLYGVNQTQVQRLLSVRNLKSAQ-SALW------WNLPIL---GMLSFstifsglSIFYYYRDCDPLLK 309
Cdd:cd10329 228 GLLLGYPILGIWYWCTDQVIVQRVLAAKNLKHARrGALFagylklLPLFLMvlpGMIAR-------ALFPDLVACVVPCG 300
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 310 GRIDKRDQIMPLFALETMgqyP-GLCGLFVSGIFSASLSTISSAVTSLSAVTLEDYLKPLYKAIFKRTLIdskstmptkI 388
Cdd:cd10329 301 NGVGCSDIAYPTLVTELL---PvGLRGLVLAVLLAALMSSLTSIFNSASTLFTMDIYKRLRPEASEKELV---------R 368
                       410       420       430       440       450       460       470
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 28573698 389 VACIFGLLCIGLA-----FVAGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRG----VLLGFLVSLIV 453
Cdd:cd10329 369 VGRIATLVVVVISilwapIIQAQGGSLFNYIQSVLSYLAPPIAAVFLLGIFWKRTNEQGafwgLIAGLVLGLVR 442
SLC5sbd_YidK cd10328
uncharacterized SLC5 subfamily, Escherichia coli YidK-like; solute binding domain; ...
13-453 3.06e-33

uncharacterized SLC5 subfamily, Escherichia coli YidK-like; solute binding domain; Uncharacterized subfamily of the solute binding domain of the solute carrier 5 (SLC5) transporter family (also called the sodium/glucose cotransporter family or solute sodium symporter family) that co-transports Na+ with sugars, amino acids, inorganic ions or vitamins. One member of the SLC5 family, human SGLT3, has been characterized as a glucose sensor and not a transporter. This subfamily includes the uncharacterized Escherichia coli YidK protein, and belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271362  Cd Length: 472  Bit Score: 132.66  E-value: 3.06e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  13 VLITILVisALIGiYYRYTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYVLST 92
Cdd:cd10328   2 LLFTALV--ALIS-WYKTRGDDLSSSDGYFLAGRSLTGVVIAGSLLLTNLSTEQLVGLNGQAYALGMSVMAWEVTAAIAL 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  93 PIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQ-MVLYMGIALYAPALAL------EAVTGIHRSMAI--- 162
Cdd:cd10328  79 IILALVFLPRYLKGGITTIPEFLEERYDETTRRIVSILFLLGyVVILLPIVLYSGALALnslfdvSELLGISYFQALwll 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 163 -VVIGLVCTFYSTLGGLKAVLITDVFQSFLMF--AAIYAVIAVSAIKAGGFAAIWD--VAVERGRVNFIEFSLDPTVrht 237
Cdd:cd10328 159 vWLIGIIGAIYAIFGGLKAVAVSDTINGVGLLigGLLIPILGLIALGDGSFLAGLDtlLTAHPEKLNAIGGADSPVP--- 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 238 wWSLIIGGMVtYLSLY--GVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYrdcdpllKGRIDKR 315
Cdd:cd10328 236 -FSTLFTGML-LVNLFywCTNQAIIQRALAAKNLKEGQKGVLLAGFFKLLVPLILVLPGIIAFHLY-------GDGLENA 306
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 316 DQIMPLFALETMGQYpgLCGLFVSGIFSASLSTISSAVTslSAVTLedYLKPLYKAIFKRTLIDSKSTMPTKIVACIFGL 395
Cdd:cd10328 307 DMAYPTLVADVLPKW--LSGFFAAVLFGAILSSFNSALN--SAATL--FSLDIYKPIINKNATDKQLVKVGKIFGIVLAL 380
                       410       420       430       440       450
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 28573698 396 LCIGLA-FVAGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIV 453
Cdd:cd10328 381 ISMIIApFIAYAPEGLFNYLQQFNGFFSIPILAIVLVGFFTKRVPALAAKIALIFGVIL 439
PRK10484 PRK10484
putative transporter; Provisional
14-453 9.77e-31

putative transporter; Provisional


Pssm-ID: 236699 [Multi-domain]  Cd Length: 523  Bit Score: 126.15  E-value: 9.77e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   14 LITILVISALIGI--YYRYTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYVLS 91
Cdd:PRK10484   4 ILSFLGFTLLVAVisWWKTRKTDTSSSDGYFLAGRSLTGPVIAGSLLLTNLSTEQLVGLNGQAYASGMSVMAWEVTAAIA 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   92 TPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQ-MVLYMGIALYAPALALEA------VTGIHRSMAI-- 162
Cdd:PRK10484  84 LIILALIFLPRYLKSGITTIPDFLEERYDKTTRRIVSILFLIGyVVSFLPIVLYSGALALNSlfhvseLLGISYGAAIwl 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  163 --VVIGLVCTFYSTLGGLKAVLITDVFQSFLMFAA--IYAVIAVSAIKAGGFAAIWD--VAVERGRVNFIEFSLDPTvrh 236
Cdd:PRK10484 164 lvWLIGIIGAIYAVFGGLKAVAVSDTINGIGLLIGglLVPVFGLIALGDGSFMQGLEqlTTVHPEKLNSIGGATDPV--- 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  237 TWWSLIIGGMVTYLSLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYrdcdpllKGRIDKRD 316
Cdd:PRK10484 241 PFPTLFTGLILVNLFYWCTNQSIVQRALGAKNLAEGQKGALLAAFFKLLGPLILVLPGIIAFHLY-------GDGLPNAD 313
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  317 QIMPLFALETMGQYpgLCGLFVSGIFSASLSTISSAVTslSAVTLedYLKPLYKAIFKRTLIDSKSTMPTKIVACIFGLL 396
Cdd:PRK10484 314 MAYPTLVNDVLPVP--LVGFFAAVLFGAILSTFNGFLN--SASTL--FSLDIYKPIINPNASEKQLVKVGKKFGFVLAII 387
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 28573698  397 CIGLA-FVAGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIV 453
Cdd:PRK10484 388 SMIVApLIANAPQGLYSYLQQLNGIYNVPILAIIIVGFFTKRVPALAAKVALGFGIIL 445
SLC5sbd_vSGLT cd10325
Vibrio parahaemolyticus Na(+)/galactose cotransporter (vSGLT) and related proteins; solute ...
12-455 6.08e-29

Vibrio parahaemolyticus Na(+)/galactose cotransporter (vSGLT) and related proteins; solute binding domain; vSGLT transports D-galactose, D-glucose, and alpha-D-fucose, with a sugar specificity in the order of D-galactose >D-fucose >D-glucose. It transports one Na+ ion for each sugar molecule, and appears to function as a monomer. vSGLT has 13 transmembrane helices (TMs): TM-1, an inverted topology repeat: TMs1-5 and TMs6-10, and TMs 11-12 (TMs numbered to conform to the solute carrier 6 family Aquifex aeolicus LeuT). This subfamily belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271360  Cd Length: 523  Bit Score: 120.87  E-value: 6.08e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  12 AVLITILVISALIGIY-YRYTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYVL 90
Cdd:cd10325   1 VIFIVYVILIIGLGLWvSREKKGGEKDATDYFLAGKSLPWWAIGASLIAANISAEQFIGMSGSGFAIGLAIASYEWMAAI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  91 STPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFtvqMVLYMGI----ALYAPALALEAVTGIHRSMAIVVIG 166
Cdd:cd10325  81 TLIIVAKFFLPIFLKNGIYTMPQFLEERYDGRVRTIMAVFW---LLLYVFVnltsVLYLGALAIETITGIPLTYSIIGLA 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 167 LVCTFYSTLGGLKAVLITDVFQSFLMFAA--IYAVIAVSAIkAGGFAAIWDVAVERG----RVNFIEFSLDPTVRHT--- 237
Cdd:cd10325 158 LFAAAYSIYGGLKAVAWTDVIQVVFLVLGglVTTYIALSLL-GGGEGVFAGFTLLAAeapeHFHMILDKSNPEDAYKdlp 236
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 238 WWSLIIGGM-VTYLSLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYRDCDPLLKGRIDKRD 316
Cdd:cd10325 237 GIAVLLGGLwVANLSYWGFNQYIIQRALAAKSLSEAQKGIVFAAFLKLLIPFIVVIPGIAAYVLASNLLLPAATGIEKPD 316
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 317 QIMPLFaletMGQYP-GLCGLFVSGIFSASLSTISSAVTSLSAVTLEDylkpLYKAIFKRTLIDSKSTMPTKIVACIFGL 395
Cdd:cd10325 317 QAYPWL----LRNLPtGLKGLVFAALTAAIVSSLASMLNSISTIFTMD----IYKKYIPKKASEKQLVNVGRLAAVIALI 388
                       410       420       430       440       450       460
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 396 LCIGLAFVAGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSF 455
Cdd:cd10325 389 IAALIAPPLLGLDQAFQYIQEYTGFISPGILAIFLLGLFWKRATSAGALVAAILSIVLSA 448
SLC5sbd_CHT cd11474
Na(+)- and Cl(-)-dependent choline cotransporter CHT and related proteins; solute-binding ...
11-466 2.82e-26

Na(+)- and Cl(-)-dependent choline cotransporter CHT and related proteins; solute-binding domain; Na+/choline co-transport by CHT is Cl- dependent. Human CHT (also called CHT1) is encoded by the SLC5A7 gene, and is expressed in the central nervous system. hCHT1-mediated choline uptake may be the rate-limiting step in acetylcholine synthesis, and essential for cholinergic transmission. Changes in this choline uptake in cortical neurons may contribute to Alzheimer's dementia. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271368 [Multi-domain]  Cd Length: 464  Bit Score: 112.23  E-value: 2.82e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  11 AAVLITILVIsALIGIYyryTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIF-CVINIAYV 89
Cdd:cd11474   2 IGVILYYLLI-LGIGLW---ASRRVKSSEDFLLAGRSLPLPVGVFTLFATWFGGETILGAAETFYEEGLGGvAQDPFGYA 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  90 LSTPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVIGLVC 169
Cdd:cd11474  78 LCLILGGLFFAKPMRRMGLLTLGDFFRQRYGRRVEVLLSIPAVLSYLGWVAAQLVALGLVLSVILGLPVETGILISAAIV 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 170 TFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFAAIWDVAVergrvnfIEFSLDPTVRH--TWWSlIIGGMV 247
Cdd:cd11474 158 LAYTLFGGMWSVAYTDVVQLIVIFVGLLVLVPFVLTNPGGVDIASAAAA-------GKLRFFPWLGTksDWLI-WIDAWL 229
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 248 TyLSLYGVNQTQV-QRLLSVRNLKSAQsalwwNLPILGMLsFSTIFSGLSIF--YYYRDCDPLLKGRIDKRD--QIMPLF 322
Cdd:cd11474 230 T-LGLGSIPQQDVfQRVLSAKSEKTAQ-----RLSLLAGV-GYLLFAIPPLLigLAAASIDPSLTQYGLEEDaqLILPLL 302
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 323 ALETMGQYpgLCGLFVSGIFSASLSTISSAVTSLSAVTLEDylkpLYKAIFKRTLIDSKSTMPTKIVACIFGLLCIGLAF 402
Cdd:cd11474 303 LQYLTPLW--VQVLFLGALLSAVMSTADSALLAPSSVFSEN----IYKPPFRPKASDRELLWVMRISVVVFGAIATLMAL 376
                       410       420       430       440       450       460
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 28573698 403 VAGSMGG-VLQASltIFGVVGgpLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGFGGPKPKP 466
Cdd:cd11474 377 TVESIYGlVELAS--DLVLVG--LFVPLLAGLYWKRANTYGALAAIIVGLVLRLLGGELLLGLPA 437
SSF pfam00474
Sodium:solute symporter family; This family includes Swiss:P33413 which is not in the Prosite ...
41-449 6.33e-25

Sodium:solute symporter family; This family includes Swiss:P33413 which is not in the Prosite entry. Membership of this family is supported by a significant blast score.


Pssm-ID: 109527 [Multi-domain]  Cd Length: 406  Bit Score: 107.43  E-value: 6.33e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698    41 YLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYVLSTPIAAYFFLPVFYRMRTTSVYEYLERRFG 120
Cdd:pfam00474   1 YFLAGRSMTGFVNGLSLAASYMSAASFVGLAGAGAASGLAGGLYAIGALVGVWLLLWLFAPRLRNLGAYTMPDYLRKRFG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   121 Q--ATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVIGLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYA 198
Cdd:pfam00474  81 GkrILVYLSALSLLLYFFTYMSVQIVGGARLIELALGLNYYTAVLLLGALTAIYTFFGGFLAVSWTDTIQAVLMLFGTII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   199 VIAVSAIKAGGFAAIWD--VAVERGRVNFI-----EFSLDPTVRHTWWSLIIGGMVtylslygVNQTQVQRLLSVRNLKS 271
Cdd:pfam00474 161 LMIIVFHEVGGYSSAVEkyMTADPNGVDLYtpdglHILRDPLTGLSLWPGLVLGTT-------GLPHILQRCLAAKDAKC 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   272 AQSALWWNLPILGMLSFSTIFSGLSIFYYYRDCDPLLKGRIDKRDQIMPLFALETMGqyPGLCGLFVSGIFSASLSTISS 351
Cdd:pfam00474 234 IRCGVLILTPMFIIVMPGMISRGLFAIALAGANPRACGTVVGCSNIAYPTLAVKLGP--PGLAGIMLAVMLAAIMSTLTS 311
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   352 AVTSLSAVTLEDylkpLYKAIFKRTLIDSKSTM-PTKIVACIFGLLCIGLAFVAGSMgGVLQASLTIFGVVGGPLLAIFT 430
Cdd:pfam00474 312 QLLSSSSAFTHD----LYKNIRRKASATEKELVgRSRIIVLVVISLAILLAVQPAQM-GIAFLVQLAFAGLGSAFLPVIL 386
                         410
                  ....*....|....*....
gi 28573698   431 LGVCTTRSNQRGVLLGFLV 449
Cdd:pfam00474 387 LAIFWKRVNEQGALWGMII 405
SLC5sbd_DUR3 cd11476
Na(+)/urea-polyamine cotransporter DUR3, and related proteins; solute-binding domain; Dur3 is ...
12-460 9.48e-20

Na(+)/urea-polyamine cotransporter DUR3, and related proteins; solute-binding domain; Dur3 is the yeast plasma membrane urea transporter. Saccharomyces cerevisiae DUR3 also transports polyamine. The polyamine uptake of S. cerevisiae DUR3 is activated upon its phosphorylation by polyamine transport protein kinase 2 (PTK2). S. cerevisiae DUR3 also appears to play a role in regulating the cellular boron concentration. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271370  Cd Length: 493  Bit Score: 92.65  E-value: 9.48e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  12 AVLITILVISAL----IGIYYRYTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGtIFCVINIA 87
Cdd:cd11476   2 GVVIGLGALFALlmvfITRLLKRYRGKNQSSEEFMTAGRSVGTGLTAAAIVSSWTWAATLLQSATVAYQYG-VSGPFWYA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  88 YVLSTPIAAYFFLPVFYRMRTTSVYEYLE---RRFGQAtrlsASLAFTVQMVLYMGIA----LYAPALALEAVTGIHRSM 160
Cdd:cd11476  81 SGATLQILLFAPLAIRIKRLAPNAHTLLEivrARYGTA----AHLVFLVFALFTNVIVlamlLLGGSAVVNALTGMPIVA 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 161 AIVVIGLVCTFYSTLGGLKAVLITDVFQSFLMF--AAIYAVIAVSAIKAGGFAAIWDVAVERGRVNFIEFSLDPTVRHTW 238
Cdd:cd11476 157 ASFLIPLGVLLYTLFGGLRATFLTDYIHTVIILiiLLVFAFAVYTSSDIGSPSKVYDLLQEAAPDLPVEGNQGSYLTFKS 236
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 239 WSLIIGG---MVTYLSLYGVNQTQVQRLLSVRNLKSAQ-----SALWWNLPILGMLSFSTIFSGLSIFYYYRDCDPLLkg 310
Cdd:cd11476 237 KAGLIFGiinIVGNFGTVFLDQGYWQRAIAARPSAAVKgyflgGLAWFAIPFLLATTLGLAALALGLNPTFEEVSAGL-- 314
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 311 ridkrdqIMPLFALETMGqyPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDylkpLYKAIFKRTLIDSKSTMPTKIVA 390
Cdd:cd11476 315 -------VLPYVAAALLG--KGGAAAVLVLLFMAVTSTASAELIAVSSIVTYD----IYRTYINPNATGKQLLRVSRIAV 381
                       410       420       430       440       450       460       470
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 28573698 391 CIFGL----LCIGLAFVAGSMGGVlqasLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGFG 460
Cdd:cd11476 382 IGFGLfmggLAVGLNYIGISLGWL----LLFMGILIGSAVFPVALGLYWRRQTGTAAVVSPIAGLVAGLAVWLV 451
SLC5sbd_SGLT6 cd11490
Na(+)/chiro-inositol cotransporter SGLT6 and related proteins; solute-binding domain; Human ...
10-453 2.04e-19

Na(+)/chiro-inositol cotransporter SGLT6 and related proteins; solute-binding domain; Human SGLT6 (also called KST1, SMIT2) is a chiro-inositol transporter, which also transports myo-inositol. It is encoded by the SLC5A11 gene. Xenopus Na1-glucose cotransporter type 1 (SGLT-1)-like protein is predicted to contain 14 membrane-spanning regions. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271381  Cd Length: 602  Bit Score: 91.89  E-value: 2.04e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  10 DAAVLITILVISALIGIYYRYTGgKQKTTQEYLMADQSMTTFPVSFSLMASFMSA---ISLMG------VSNESYEFGTI 80
Cdd:cd11490   1 DIVVLVLYFLFVLAVGLWSMWKT-KRSTVKGYFLAGKDMTWWPVGASLFASNVGSghfIGLAGsgaaagIGVVAYEWNGL 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  81 FCVINIAYVlstpiaayfFLPVFYRMRTTSVYEYLERRFG--QATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHR 158
Cdd:cd11490  80 FMVLVLAWL---------FLPIYIASRVTTMPEYLKKRFGgkRIQIFLAVLYLFIYIFTKISVDMYAGAVFIQQALQWDL 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 159 SMAIVVIGLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFAAIWD---VAVERGRVN----------- 224
Cdd:cd11490 151 YLAVVGLLGITALYTVAGGLAAVIYTDALQTIIMVIGALILMGYSFAEVGGFEALLEkyfQAIPSIRSPnstcgipreda 230
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 225 FIEFSLDPTVRHTWWSLIIGGMVTYLSLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYYYRD- 303
Cdd:cd11490 231 FHIFRDPVTSDLPWPGVLLGMSIPSLWYWCTDQVIVQRSLAAKNLSHAKGGSLLAAYLKVLPLFMMVIPGMISRILFPDq 310
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 304 --------CDPLLKGRIDKRDQIMPLFALETMGQypGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDylkpLYKAIFKR 375
Cdd:cd11490 311 vacadpevCKEICGNPSGCSDIAYPKLVMELLPT--GLRGLMMAVMLAALMSSLTSIFNSASTIFTMD----LWRHIRPR 384
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 376 TlidskSTMPTKIVACIFGLLCIGLA-----FVAGSMGGVLQASL-TIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLV 449
Cdd:cd11490 385 A-----SEWELMIVGRVFVLVLVVVSilwipLVQASQGGQLFIYIqSISSYLQPPVAVVFIAGCFWKRTNEKGAFWGLMV 459

                ....
gi 28573698 450 SLIV 453
Cdd:cd11490 460 GLAV 463
SLC5sbd_SGLT1 cd11486
Na(+)/glucose cotransporter SGLT1;solute binding domain; Human SGLT1 (hSGLT1) is a ...
10-453 3.05e-19

Na(+)/glucose cotransporter SGLT1;solute binding domain; Human SGLT1 (hSGLT1) is a high-affinity/low-capacity glucose transporter, which can also transport galactose. In the transport mechanism, two Na+ ions first bind to the extracellular side of the transporter and induce a conformational change in the glucose binding site. This results in an increased affinity for glucose. A second conformational change in the transporter follows, bringing the Na+ and glucose binding sites to the inner surface of the membrane. Glucose is then released, followed by the Na+ ions. In the process, hSGLT1 is also able to transport water and urea and may be a major pathway for transport of these across the intestinal brush-border membrane. hSGLT1 is encoded by the SLC5A1 gene and expressed mostly in the intestine, but also in the trachea, kidney, heart, brain, testis, and prostate. The WHO/UNICEF oral rehydration solution (ORS) for the treatment of secretory diarrhea contains salt and glucose. The glucose, along with sodium ions, is transported by hSGLT1 and water is either co-transported along with these or follows by osmosis. Mutations in SGLT1 are associated with intestinal glucose galactose malabsorption (GGM). Up-regulation of intestinal SGLT1 may protect against enteric infections. SGLT1 is expressed in colorectal, head and neck, and prostate tumors. Epidermal growth factor receptor (EGFR) functions in cell survival by stabilizing SGLT1, and thereby maintaining intracellular glucose levels. SGLT1 is predicted to have 14 membrane-spanning regions. This subgroup belongs to the solute carrier 5 (SLC5)transporter family.


Pssm-ID: 271379  Cd Length: 636  Bit Score: 91.53  E-value: 3.05e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  10 DAAVLITILVISALIGIYYRYTGGKqKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYV 89
Cdd:cd11486   2 DISVIVIYFVVVLAVGVWAMVSTNR-GTVGGFFLAGRSMVWWPIGASLFASNIGSGHFVGIAGTGAAAGIAIGGFEWNAL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  90 LSTPIAAYFFLPVFYRMRTTSVYEYLERRFG-QATRLSASLaftVQMVLY----MGIALYAPALALEAVTGIHRSMAIVV 164
Cdd:cd11486  81 VVVVVLGWLFVPIYIKAGVVTMPEYLRKRFGgQRIQVYLSV---LSLCLYiftkISADIFSGAIFINLALGLNLYLAIVI 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 165 IGLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFAAIWD-------VAVERGRVNFIEFSLDP----- 232
Cdd:cd11486 158 LLAITALYTITGGLAAVIYTDTLQTIIMVVGSFILMGFAFNEVGGYDAFMEkymtaipSVIGTGNSTSQEKCYTPradsf 237
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 233 -------TVRHTWWSLIIGGMVTYLSLYGVNQTQVQRLLSVRNLKSAQSA--LWWNLPILGMlsFSTIFSGLSIFYYYRD 303
Cdd:cd11486 238 hifrdpiTGDLPWPGLLFGLSILTLWYWCTDQVIVQRCLSAKNMSHVKAGciLCGYLKLLPM--FIMVMPGMISRILYTD 315
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 304 ---------CDPLLKGRIDKRDQIMPLFALETMGQypGLCGLFVSGIFSASLSTISSAVTSLSAV-TLEDYLKPLYKAIF 373
Cdd:cd11486 316 eiacvvpdeCKAVCGTEVGCTNIAYPKLVVELMPN--GLRGLMLSVMLASLMSSLTSIFNSASTLfTMDIYTKVRKKASE 393
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 374 KRTLIDSKstmptkivacIFGLLCIGLAFV------AGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGF 447
Cdd:cd11486 394 KELMIAGR----------LFMLVLIGISIAwvpivqSAQSGQLFDYIQSITSYLGPPIAAVFLLAIFCKRVNEPGAFWGL 463

                ....*.
gi 28573698 448 LVSLIV 453
Cdd:cd11486 464 CVGLLV 469
SLC5sbd_PanF cd10327
Na(+)/pantothenate cotransporters: PanF of Escherichia coli and related proteins; solute ...
14-402 5.85e-19

Na(+)/pantothenate cotransporters: PanF of Escherichia coli and related proteins; solute binding domain; PanF catalyzes the Na+-coupled uptake of extracellular pantothenate for coenzyme A biosynthesis in cells. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 212037  Cd Length: 472  Bit Score: 89.96  E-value: 5.85e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  14 LITILVISALIGIYYRYTGGKQKTT--QEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYVls 91
Cdd:cd10327   5 IIIYLVILLGIGFYARRSKKRRSGDflEEYFIGGRSMGGFVLAMTLVATYTSASSFIGGPGAAYKIGLGWVLLAMIQV-- 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  92 tpIAAYFFLPVF--------YRMRTTSVYEYL-ERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAI 162
Cdd:cd10327  83 --PTGFLTLGVLgkkfaiiaRKINAVTIIDYLrARYNSKALVVLSSLALIVFFIAAMVAQFIGGARLLEAVTGLSYVTGL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 163 VVIGLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFAAIWD--VAVERGRVN-FIEFSLDPTVRHTWW 239
Cdd:cd10327 161 LIFGLTVILYTTIGGFRAVALTDAIQGIVMIIGTVLLLVGVLAAGGGMEAIMAtlAEIDPNLLTpFGPGFLSPPYILSFW 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 240 SLIIGGMVtylslyGVNQTqVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGlsifyyyrdcdPLLKG---RIDKRD 316
Cdd:cd10327 241 VLVGFGVI------GLPQT-AVRCMGYKDSKSMHRAMIIGTVVVGFLMLGMHLAG-----------VLGRAvlpDLEVPD 302
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 317 QIMPLFALETMgqYPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDylkpLYKAIFKRTLIDSKSTMP--TKIVACIFG 394
Cdd:cd10327 303 KVIPTLALKVL--PPWLAGLFLAGPLAAIMSTVDSQLILASSAIVKD----LYLNYKNKEKKTSEKKVKriSLIITIILG 376

                ....*...
gi 28573698 395 LLCIGLAF 402
Cdd:cd10327 377 LLVFLLAI 384
SLC5sbd_SGLT5 cd11489
Na(+)/glucose cotransporter SGLT5 and related proteins; solute-binding domain; Human SGLT5 is ...
10-504 1.21e-16

Na(+)/glucose cotransporter SGLT5 and related proteins; solute-binding domain; Human SGLT5 is a glucose transporter, which also transports galactose. It is encoded by the SLC5A10 gene, and is exclusively expressed in the renal cortex. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 212058  Cd Length: 604  Bit Score: 83.45  E-value: 1.21e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  10 DAAVLITILVISALIGIYYRYTGGKQkTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVI--NIA 87
Cdd:cd11489   4 DIIVIGVYFALNVAVGIWSSCRVSRN-TVSGYFLAGRDMAWWPIGASLFASSEGSGLFIGLAGTGAAGGIAVAGFewNAT 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  88 YVLSTpiAAYFFLPVFYRMRTTSVYEYLERRFG-QATRLSAS-LAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVI 165
Cdd:cd11489  83 YALLA--LAWVFVPVYISSGIVTMPEYLQRRFGgERIRMYLSvLSLLLSVFTKISTDLYSGALFVQVCLGWNLYLSTVLM 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 166 GLVCTFYSTLGGLKAVLITDVFQSFLMF--AAIYAVIAVSAIkaGGFAAIWDVAVER-------------GRVNFIEFSL 230
Cdd:cd11489 161 LVVTALYTIAGGLAAVIYTDALQTLIMVigAVILTIKAFNQI--GGYSNLEEAYLQAvpskiipnttchlPRADAMHLFR 238
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 231 DPTVRHTWWSLIIGGMVTYLSLYG-VNQTQVQRLLSVRNLKSAQ--SALWWNLPILGMlsFSTIFSGLSIFYYYRD---- 303
Cdd:cd11489 239 DPVTGDLPWTGMTFGLTIMATWYWcTDQVIVQRSLSARSLSHAKggSILASYLKMLPM--GLIIMPGMISRALFPDdvac 316
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 304 -----CDPLLKGRIDKRDQIMPLFALETMGQypGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDYLKPLYKAIFKRTLI 378
Cdd:cd11489 317 vdpeeCLRVCGAEVGCSNIAYPKLVMELMPS--GLRGLMIAVMMAALMSSLTSIFNSSSTLFTMDIWRRLRPGASERELL 394
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 379 dskstMPTKIVACIF-GLLCIGLAFVAGSMGGVLQASL-TIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFW 456
Cdd:cd11489 395 -----LVGRLVTVILvGVSVVWIPILQSSNSGQLYIYIqSVTSYLAPPVTAVFVLAVFWRRANEQGAFWGLMAGLVVGLT 469
                       490       500       510       520       530       540
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 28573698 457 -MGF---------GGPKPKPVT------LEFSTAGCENATAVMARAIELSSKSSGVVIEPDYFW 504
Cdd:cd11489 470 rMVLefahpaprcGVPDTRPSVlrsmhyLHFAVALCALSGAVVVAGSLLTPPPQSVQIRNLTWW 533
SLC5sbd_SGLT4 cd11488
Na(+)/glucose cotransporter SGLT4 and related proteins; solute-binding domain; Human SGLT4 ...
10-453 3.31e-16

Na(+)/glucose cotransporter SGLT4 and related proteins; solute-binding domain; Human SGLT4 (hSGLT4) has been reported to be a low-affinity glucose transporter with unusual sugar selectivity: it transports D-mannose but not galactose or 3-O-methyl-D-glucoside. It is encoded by the SLC5A9 gene and is expressed in intestine, kidney, liver, brain, lung, trachea, uterus, and pancreas. hSLGT4 is predicted to contain 14 membrane-spanning regions. This subgroup belongs to the solute carrier 5 (SLC5 )transporter family.


Pssm-ID: 271380  Cd Length: 605  Bit Score: 81.90  E-value: 3.31e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  10 DAAVLITILVISALIGIYYRYTGGKqKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVI--NIA 87
Cdd:cd11488   1 DIAVVVVYFVFVLAVGIWSSIRASR-GTVGGYFLAGRSMTWWPIGASLMSSNVGSGLFIGLAGTGAAGGLAVGGFewNAA 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  88 YVLSTpiAAYFFLPVFYRMRTTSVYEYLERRFG-QATRLSAS-LAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVI 165
Cdd:cd11488  80 WVLIA--LGWIFVPVYIAAGVVTMPEYLKKRFGgQRIRIYMSvLSLILYIFTKISTDIFSGALFIQVSLGWNLYLSTVIL 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 166 GLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGF--------AAIWDVAVERG-----RVNFIEFSLDP 232
Cdd:cd11488 158 LAVTALYTIAGGLTAVIYTDALQTVIMVIGAFVLMFIAFDKVGWYpgleqqyeKAIPALTVPNTtchlpRSDAFHIFRDP 237
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 233 -TVRHTWWSLIIGGMVTYLSLYGVNQTQVQRLLSVRNLKSAQ--SALWWNLPILGMlsFSTIFSGLSIFYYYRD------ 303
Cdd:cd11488 238 vTGDIPWPGLIFGLTVLATWVWCTDQVIVQRSLSAKNLSHAKggSVLGGYLKILPM--FFVVMPGMISRALFPDevgcvd 315
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 304 ---CDPLLKGRIDKRDQIMPLFALETMGQypGLCGLFVSGIFSASLSTISSAVTSLSAV-TLEDYLKPLYKAIFKRTLID 379
Cdd:cd11488 316 pdeCQKICGAKVGCSNIAYPKLVVELMPV--GLRGLMIAVIMAALMSSLTSIFNSSSTLfTMDVWQRIRRRASEQELMVV 393
                       410       420       430       440       450       460       470
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 28573698 380 SKSTMPTKIVACIFGLLCIGLAfVAGSMGGVLQAsltIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIV 453
Cdd:cd11488 394 GRVFILLLVVISILWIPIIQTA-NSGQLFDYIQA---VTSYLSPPITAVFILAIFWKRVNEPGAFWGLMVGLVV 463
SLC5sbd_u4 cd11480
Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain; SLC5 ...
13-462 3.20e-14

Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain; SLC5 (also called the sodium/glucose cotransporter family or solute sodium symporter family) is a family of proteins that co-transports Na+ with sugars, amino acids, inorganic ions or vitamins. Prokaryotic members of this family include Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. One member of the SLC5 family, human SGLT3, has been characterized as a glucose sensor and not a transporter. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271374  Cd Length: 488  Bit Score: 75.23  E-value: 3.20e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  13 VLITILVISALIGIYYrYTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYVLST 92
Cdd:cd11480   1 IGLFFVFVTITLYITI-WAARRTRSTSDFYVAGRGVPPVQNGLAIAGDYMSAASFLGIAGLIALSGYDGLAYAIGWTGGY 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  93 PIAAYFFLPVFYRMRTTSVYEYLERRFGQAT-RLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVIGLVCTF 171
Cdd:cd11480  80 VLLLLLVAEPLRNFGKYTVPDFLGARLGSRPvRLVAAVSTLVISFFYLVAQMVGAGLLLSLLLGIPYEVGVVVVGALMIV 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 172 YSTLGGLKAVLITDVFQSF-LMFAAIYAVIAVSAiKAGGFAAIWDVAVERGRVNFIEFS----LDPTVRHT----WWSLI 242
Cdd:cd11480 160 YVVLGGMRATTWVQIIQYVlLLGAFLVPAILVLA-RFGGNPLGAGPGLLGLAAAAASGAgeayLAPGLLLTdpldVISLT 238
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 243 IGGMVTYLSLYGVnqtqVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSG-LSIFYYYRDCDPLLKGRIDKRDQIMPL 321
Cdd:cd11480 239 LALMLGTAGLPHV----LMRFYTVPDARAARKSVVWALGFIGLFYLLAPALGfGARALVGPDVIGAPIAGELDGGGDMAV 314
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 322 FALETMGQYPG-LCGLFVSGIFSASLSTISSAVTSLSAVTLEDylkpLYKAIFKRTLIDSKSTMPTKIVACIFGLLCIGL 400
Cdd:cd11480 315 LLLPEIAGLGDlLLALVAAGAFAAILATVAGLLLAAASALAHD----LYAGVIRPGASERREVRVARIAAVVVGVIAILL 390
                       410       420       430       440       450       460
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 28573698 401 AFVAGSmGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGFGGP 462
Cdd:cd11480 391 ALLFPP-QNVAFLVALAFAIAASAFFPVLVLGIFWRRFTTRGAIAGMLVGLLVSLVLIVLSP 451
SLC5sbd_u3 cd11479
Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain; SLC5 ...
13-459 5.46e-14

Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain; SLC5 (also called the sodium/glucose cotransporter family or solute sodium symporter family) is a family of proteins that co-transports Na+ with sugars, amino acids, inorganic ions or vitamins. Prokaryotic members of this family include Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. One member of the SLC5 family, human SGLT3, has been characterized as a glucose sensor and not a transporter. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271373  Cd Length: 454  Bit Score: 74.18  E-value: 5.46e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  13 VLITILVISALIGIYYrYTGGKQKTTQEYLMADQSMttfpvSFSLMASFMSAISLMGVSN-----ESYEFGT--IFCVIN 85
Cdd:cd11479   3 YGVIALYFAAMIAIGW-WGMRRAKTSEDYLVAGRRL-----GPGLYLGTMAAVVLGGASTiggvgLGYQYGIsgMWLVVA 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  86 IAyvLSTPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVI 165
Cdd:cd11479  77 IG--LGILALSLLLAKRIARLKVYTVSEVLELRYGPSARVISALVMLAYTLMVAVTSTIAIGTVFSVLFGLPRTLSILVG 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 166 GLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVI-AVSAIKAGGFAAIwdvaveRGRVNFIEFSLDPtvrhtwwsliIG 244
Cdd:cd11479 155 GGIVVLYSVLGGMWSITLTDIIQFVIKTIGIFLLLlPLALSKAGGLSGL------QEKLPASYFDLTS----------IG 218
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 245 G--MVTYLSLYG----VNQTQVQRLLSVRNLKSAQSAlwwnlpilgmlsfsTIFSGLSIFYY------YRDCDPLLKGRI 312
Cdd:cd11479 219 WdtIVTYFLLYFfgilIGQDIWQRVFTARSEKVARWG--------------GVAAGLYCVLYgvagalIGMAAAVLLPDL 284
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 313 DKRDQIMPLFALETMGqyPGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDylkpLYKAIFKRTLIDSKSTMPTKIVACI 392
Cdd:cd11479 285 ANPQNAFATMAQEVLP--VGLRGLVLAAALAAMMSTASGALLASSTVLTND----VLPRLRRKNESERSEVRLSRLFTLL 358
                       410       420       430       440       450       460       470
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 393 FGLLCIGLAFVAGSMGGVLQASLTIfgVVGG---PLLAIFTLGVCTTRSNQRGVLLGFLVSLIVSFWMGF 459
Cdd:cd11479 359 LGVVVIVIAVLVNDVVAALTIAYAI--LVGGllvPILGGLFWKRATGAGALASMVAGSVVVLAGMAVDGL 426
SLC5sbd_SMIT cd11491
Na(+)/myo-inositol cotransporter SMIT and related proteins; solute-binding domain; Human SMIT ...
13-453 1.65e-13

Na(+)/myo-inositol cotransporter SMIT and related proteins; solute-binding domain; Human SMIT is a high-affinity myo-inositol transporter, and is expressed in brain, heart, kidney, and lung. Inhibition of myo-inositol uptake, through down-regulation of SMIT, may be a common mechanism of action of mood stabilizers, including lithium, carbamazepine, and valproate. SMIT is encoded by the SLC5A3 gene, which is a candidate gene for pathogenesis of nervous system dysfunction in Down syndrome (DS). The SNP, 21q22 near SLC5A3-MRPS6-KCNE2, has been associated with coronary heart disease, cardiovascular disease, and myocardial infarction. SMIT may also be involved in the pathogeneisis of congenital cataract. SMIT also plays roles in osteogenesis, bone formation, and bone mineral density determination. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 271382  Cd Length: 609  Bit Score: 73.36  E-value: 1.65e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  13 VLITILVISALIGI-YYRYTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYVLS 91
Cdd:cd11491   2 IAVVALYFILVMCIgIYAMWKSNRSTVSGYFLAGRSMTWLPVGASLFASNIGSEHFIGLAGSGAAAGFAVGAFEFNALIL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  92 TPIAAYFFLPVFYRMRTTSVYEYLERRFGqATRLSASLAfTVQMVLY----MGIALYAPALALEAVTGIHRSMAIVV-IG 166
Cdd:cd11491  82 LQLLGWVFIPVYIRSGVYTLPEYLSKRFG-GHRIQVYLA-ALSLILYiftkISVNLYSGALFIQEALGWNLYVSIILlLG 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 167 LVCTFYSTlGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFA--------AIWDVAVERGRVNFIEFSL-------- 230
Cdd:cd11491 160 LTALLTVT-GGLAAVIYTDTLQAFLMIIGALTLMIISMMEIGGFEgvksrymlASPNVTSILLTYNLSNTNSccvhpkkd 238
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 231 ------DPTVRHT-WWSLIIGGMVTYLSLYGVNQTQVQRLLSVRNLKSAQSA-----LWWNLP-----ILGMLSfSTIFS 293
Cdd:cd11491 239 afkllrDPTDEDVpWPGFILGQTPASIWYWCADQVIVQRVLAAKSLSHAQGAtlmagFIKLLPlfiivIPGMIS-RILFP 317
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 294 GLSIFYYYRDCDPLLKGRIDKRDQIMPLFALETMGQypGLCGLFVSGIFSASLSTISSAVTSLSAVTLEDylkpLYKAIF 373
Cdd:cd11491 318 DDIACINPEHCMQVCGSRAGCSNIAYPRLVMKIMPS--GLRGLMMAVMIAALMSDLTSIFNSASTLFTLD----VYKLIR 391
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 374 KrtlidSKSTMPTKIVACIFGLLCIGLAF-----VAGSMGGvlQASLTIFGV---VGGPLLAIFTLGVCTTRSNQRGVLL 445
Cdd:cd11491 392 K-----KASSRELMIVGRIFVAVMVVISIawipvIQEMQGG--QLYLYIQEVaayLTPPVASLYLLAIFWKRTTEQGAFY 464

                ....*...
gi 28573698 446 GFLVSLIV 453
Cdd:cd11491 465 GGMAGFVL 472
SLC5sbd_SGLT2 cd11487
Na(+)/glucose cotransporter SGLT2 and related proteins; solute-binding domain; Human SGLT2 ...
10-453 4.59e-13

Na(+)/glucose cotransporter SGLT2 and related proteins; solute-binding domain; Human SGLT2 (hSGLT2) is a high-capacity, low-affinity glucose transporter, that plays an important role in renal glucose reabsorption. It is encoded by the SLC5A2 gene and expressed almost exclusively in renal proximal tubule cells. Mutations in hSGLT2 cause Familial Renal Glucosuria (FRG), a rare autosomal defect in glucose transport. hSGLT2 is a major drug target for regulating blood glucose levels in diabetes. hSGLT2 is predicted to have 14 membrane-spanning regions. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.


Pssm-ID: 212056 [Multi-domain]  Cd Length: 583  Bit Score: 71.88  E-value: 4.59e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  10 DAAVLITILVISALIGIYYRYTGGKqKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNES---------YEFGTI 80
Cdd:cd11487   2 DISVIAAYFLLVIGVGLWSMCRTNR-GTVGGYFLAGRSMVWWPVGASLFASNIGSGHFVGLAGTGaasgiavagFEWNAL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  81 FCVINIAYVlstpiaayfFLPVFYRMRTTSVYEYLERRFGqATRLSASLAfTVQMVLYM----GIALYAPALALEAVTGI 156
Cdd:cd11487  81 FVVLLLGWL---------FVPVYLTAGVITMPQYLKKRFG-GQRIRLYLS-VLSLFLYIftkiSVDMFSGAVFIQQALGW 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 157 HRSMAIVVIGLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVIAVSAIKAGGFAAIWD----------VAVERGRVNFI 226
Cdd:cd11487 150 NIYASVIALLGITMIYTVTGGLAALMYTDTVQTFVIIGGACVLMGYAFHEVGGYSALFEkylkavpsltVSEDPAVGNIS 229
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 227 EFSLDPT------VRH------TWWSLIIGGMVTYLSLYGVNQTQVQRLLSVRNLKSAQSA--LWWNLPILGMlsFSTIF 292
Cdd:cd11487 230 SSCYRPRpdsyhlLRDpvtgdlPWPALILGLTIVSSWYWCSDQVIVQRCLAARSLTHVKAGciLCGYLKLLPM--FLMVM 307
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 293 SGLSIFYYYRD---------CDPLLKGRIDKRDQIMPLFALETMGQypGLCGLFVSGIFSASLSTISSAVTSLSAV-TLE 362
Cdd:cd11487 308 PGMISRVLYPDevacvepsvCLRVCGTEVGCSNIAYPKLVVKLMPN--GLRGLMLAVMLAALMSSLASIFNSSSTLfTMD 385
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698 363 DYLKPLYKAIFKRTLIDSKSTmptkiVACIFGLLCIGLAFVAGSMGGVLQASL-TIFGVVGGPLLAIFTLGVCTTRSNQR 441
Cdd:cd11487 386 IWTRLRPQAGDKELLLVGRVW-----VVCIVAVSVAWIPVVQAAQGGQLFDYIqSVSSYLAPPIAAVFFLALFVKRVNEP 460
                       490
                ....*....|..
gi 28573698 442 GVLLGFLVSLIV 453
Cdd:cd11487 461 GAFWGLIGGLLM 472
PRK15419 PRK15419
sodium/proline symporter PutP;
36-460 1.33e-06

sodium/proline symporter PutP;


Pssm-ID: 185317  Cd Length: 502  Bit Score: 51.17  E-value: 1.33e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   36 KTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYVLSTPI-----AAYFFLPVFYRMRTTS 110
Cdd:PRK15419  30 KNFDDYILGGRSLGPFVTALSAGASDMSGWLLMGLPGAVFLSGISESWIAIGLTLGAWInwklvAGRLRVHTEYNNNALT 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  111 VYEYLERRF---GQATRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVVIGLVCTFYSTLGGLKAVLITDVF 187
Cdd:PRK15419 110 LPDYFTGRFedkSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATILYTFIGGFLAVSWTDTV 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  188 QSFLMFAAIYAVIAVSAIKAGGFAAIWDVAVERGRVN---FIEFSLDPTVRHTWWSLIIGGMVTYLSLYGVNQTQvQRLL 264
Cdd:PRK15419 190 QASLMIFALILTPVIVIISVGGFGDSLEVIKQKSIENvdmLKGLNFVAIISLMGWGLGYFGQPHILARFMAADSH-HSIV 268
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  265 SVRNLksaqSALWWNLPILGMLSFStiFSGLSIFyyyrDCDPLLKGRIDKRDQIMpLFALETMGQYPGLCGLFVSGIFSA 344
Cdd:PRK15419 269 HARRI----SMTWMILCLAGAVAVG--FFGIAYF----NEHPAVAGAVNQNAERV-FIELAQILFNPWIAGILLSAILAA 337
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698  345 SLSTISSAVTSLSAVTLEDylkpLYKAIFKRTLIDSKSTMPTKIVACIFGLLCIGLAF-VAGSMGGVLQASLTIFGVVGG 423
Cdd:PRK15419 338 VMSTLSCQLLVCSSAITED----LYKAFLRKHASQKELVWVGRVMVLVVALVAIALAAnPENRVLGLVSYAWAGFGAAFG 413
                        410       420       430
                 ....*....|....*....|....*....|....*...
gi 28573698  424 PllaIFTLGVCTTRSNQRGVLLGFLV-SLIVSFWMGFG 460
Cdd:PRK15419 414 P---VVLFSVMWSRMTRNGALAGMIIgALTVIVWKQFG 448
PRK12488 PRK12488
cation/acetate symporter;
9-211 1.29e-03

cation/acetate symporter;


Pssm-ID: 237114 [Multi-domain]  Cd Length: 549  Bit Score: 41.71  E-value: 1.29e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698    9 WDAAVLITILVISALiGIYyRYTGGKQKTTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAY 88
Cdd:PRK12488  32 WTAIGMFMVFVLFTL-GIT-RWAARRTRSASDFYTAGGGLTGMQNGLAIAGDMISAASFLGISAMMFMNGYDGLLYALGV 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28573698   89 VLSTPIaayFFLPVFYRMRTTSVYEYLE---RRFGQA-TRLSASLAFTVQMVLYMGIALYAPALALEAVTGIHRSMAIVV 164
Cdd:PRK12488 110 LAGWPI---ILFLIAERLRNLGKYTFADvvsYRLAQGpVRLTAAFGTLTVVLMYLVAQMVGAGKLIELLFGISYLYAVVI 186
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 28573698  165 IGLVCTFYSTLGGLKAVLITDVFQSFLMFAAIyAVIAVSAIKAGGFA 211
Cdd:PRK12488 187 VGALMVLYVTFGGMLATTWVQIIKAVLLLSGT-SFMAFMVLKHFGFS 232
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH