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Conserved domains on  [gi|24659188|ref|NP_611771|]
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ribosomal protein L22-like [Drosophila melanogaster]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Ribosomal_L22e pfam01776
Ribosomal L22e protein family;
194-291 1.31e-44

Ribosomal L22e protein family;


:

Pssm-ID: 460321  Cd Length: 100  Bit Score: 147.28  E-value: 1.31e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24659188   194 FVIDCACVAEDMILDLADFEQYLKTHIKIKNKLNQLKDQVTFERTKNFSLIIHSGVHFSKRYFKYLTKRYLKKVSLRDWL 273
Cdd:pfam01776   1 FTIDCSHPVEDGIFDPADFEKFLQERIKVNGKTGNLGDNVTISRKGKNKITVTSEIPFSKRYLKYLTKKYLKKNQLRDWL 80
                          90
                  ....*....|....*...
gi 24659188   274 RVVSTAKDTFAMTYFKIQ 291
Cdd:pfam01776  81 RVVATSKDTYELRYFNIN 98
LGT super family cl00478
Prolipoprotein diacylglyceryl transferase;
20-189 7.13e-04

Prolipoprotein diacylglyceryl transferase;


The actual alignment was detected with superfamily member PRK13108:

Pssm-ID: 469786 [Multi-domain]  Cd Length: 460  Bit Score: 41.12  E-value: 7.13e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24659188   20 QPSKKAPAKVTPVETA-TPSAAPPLSSKKVAKAPAVALKNLDL---AMKESAKKAAEAADQKLVSKAKKGQNASRKNLmq 95
Cdd:PRK13108 294 EALEREPAELAAAAVAsAASAVGPVGPGEPNQPDDVAEAVKAEvaeVTDEVAAESVVQVADRDGESTPAVEETSEADI-- 371
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24659188   96 vpEPVAPEVDNKKKSAPPKrgnaeiptvVPAKKAALVQEKPKEQAAAAPKAENVEVP---AAKAKSVKKSLATPANPKPK 172
Cdd:PRK13108 372 --EREQPGDLAGQAPAAHQ---------VDAEAASAAPEEPAALASEAHDETEPEVPekaAPIPDPAKPDELAVAGPGDD 440
                        170
                 ....*....|....*..
gi 24659188  173 PKRTKNVLRGKRLAKKK 189
Cdd:PRK13108 441 PAEPDGIRRQDDFSSRR 457
 
Name Accession Description Interval E-value
Ribosomal_L22e pfam01776
Ribosomal L22e protein family;
194-291 1.31e-44

Ribosomal L22e protein family;


Pssm-ID: 460321  Cd Length: 100  Bit Score: 147.28  E-value: 1.31e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24659188   194 FVIDCACVAEDMILDLADFEQYLKTHIKIKNKLNQLKDQVTFERTKNFSLIIHSGVHFSKRYFKYLTKRYLKKVSLRDWL 273
Cdd:pfam01776   1 FTIDCSHPVEDGIFDPADFEKFLQERIKVNGKTGNLGDNVTISRKGKNKITVTSEIPFSKRYLKYLTKKYLKKNQLRDWL 80
                          90
                  ....*....|....*...
gi 24659188   274 RVVSTAKDTFAMTYFKIQ 291
Cdd:pfam01776  81 RVVATSKDTYELRYFNIN 98
PTZ00198 PTZ00198
60S ribosomal protein L22; Provisional
181-291 1.46e-32

60S ribosomal protein L22; Provisional


Pssm-ID: 173474  Cd Length: 122  Bit Score: 117.07  E-value: 1.46e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24659188  181 RGKRLAKKKawQRFVIDCACVAEDMILDLADFEQYLKTHIKIKNKLNQLKDQVTFERTKNfSLIIHSGVHFSKRYFKYLT 260
Cdd:PTZ00198  10 RQKQVKKKK--KKFKIDCTIPAEDGIIDLSGFEQFLQDRIKVDGKTGNLGNKVRVSREKN-KITVTTTIPFSKRYLKYLT 86
                         90       100       110
                 ....*....|....*....|....*....|.
gi 24659188  261 KRYLKKVSLRDWLRVVSTAKDTFAMTYFKIQ 291
Cdd:PTZ00198  87 KKYLKKKQLRDFLRVVATGKGTYELKYFNIQ 117
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
20-189 7.13e-04

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 41.12  E-value: 7.13e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24659188   20 QPSKKAPAKVTPVETA-TPSAAPPLSSKKVAKAPAVALKNLDL---AMKESAKKAAEAADQKLVSKAKKGQNASRKNLmq 95
Cdd:PRK13108 294 EALEREPAELAAAAVAsAASAVGPVGPGEPNQPDDVAEAVKAEvaeVTDEVAAESVVQVADRDGESTPAVEETSEADI-- 371
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24659188   96 vpEPVAPEVDNKKKSAPPKrgnaeiptvVPAKKAALVQEKPKEQAAAAPKAENVEVP---AAKAKSVKKSLATPANPKPK 172
Cdd:PRK13108 372 --EREQPGDLAGQAPAAHQ---------VDAEAASAAPEEPAALASEAHDETEPEVPekaAPIPDPAKPDELAVAGPGDD 440
                        170
                 ....*....|....*..
gi 24659188  173 PKRTKNVLRGKRLAKKK 189
Cdd:PRK13108 441 PAEPDGIRRQDDFSSRR 457
 
Name Accession Description Interval E-value
Ribosomal_L22e pfam01776
Ribosomal L22e protein family;
194-291 1.31e-44

Ribosomal L22e protein family;


Pssm-ID: 460321  Cd Length: 100  Bit Score: 147.28  E-value: 1.31e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24659188   194 FVIDCACVAEDMILDLADFEQYLKTHIKIKNKLNQLKDQVTFERTKNFSLIIHSGVHFSKRYFKYLTKRYLKKVSLRDWL 273
Cdd:pfam01776   1 FTIDCSHPVEDGIFDPADFEKFLQERIKVNGKTGNLGDNVTISRKGKNKITVTSEIPFSKRYLKYLTKKYLKKNQLRDWL 80
                          90
                  ....*....|....*...
gi 24659188   274 RVVSTAKDTFAMTYFKIQ 291
Cdd:pfam01776  81 RVVATSKDTYELRYFNIN 98
PTZ00198 PTZ00198
60S ribosomal protein L22; Provisional
181-291 1.46e-32

60S ribosomal protein L22; Provisional


Pssm-ID: 173474  Cd Length: 122  Bit Score: 117.07  E-value: 1.46e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24659188  181 RGKRLAKKKawQRFVIDCACVAEDMILDLADFEQYLKTHIKIKNKLNQLKDQVTFERTKNfSLIIHSGVHFSKRYFKYLT 260
Cdd:PTZ00198  10 RQKQVKKKK--KKFKIDCTIPAEDGIIDLSGFEQFLQDRIKVDGKTGNLGNKVRVSREKN-KITVTTTIPFSKRYLKYLT 86
                         90       100       110
                 ....*....|....*....|....*....|.
gi 24659188  261 KRYLKKVSLRDWLRVVSTAKDTFAMTYFKIQ 291
Cdd:PTZ00198  87 KKYLKKKQLRDFLRVVATGKGTYELKYFNIQ 117
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
20-189 7.13e-04

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 41.12  E-value: 7.13e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24659188   20 QPSKKAPAKVTPVETA-TPSAAPPLSSKKVAKAPAVALKNLDL---AMKESAKKAAEAADQKLVSKAKKGQNASRKNLmq 95
Cdd:PRK13108 294 EALEREPAELAAAAVAsAASAVGPVGPGEPNQPDDVAEAVKAEvaeVTDEVAAESVVQVADRDGESTPAVEETSEADI-- 371
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24659188   96 vpEPVAPEVDNKKKSAPPKrgnaeiptvVPAKKAALVQEKPKEQAAAAPKAENVEVP---AAKAKSVKKSLATPANPKPK 172
Cdd:PRK13108 372 --EREQPGDLAGQAPAAHQ---------VDAEAASAAPEEPAALASEAHDETEPEVPekaAPIPDPAKPDELAVAGPGDD 440
                        170
                 ....*....|....*..
gi 24659188  173 PKRTKNVLRGKRLAKKK 189
Cdd:PRK13108 441 PAEPDGIRRQDDFSSRR 457
PRK05035 PRK05035
electron transport complex protein RnfC; Provisional
24-160 6.62e-03

electron transport complex protein RnfC; Provisional


Pssm-ID: 235334 [Multi-domain]  Cd Length: 695  Bit Score: 38.01  E-value: 6.62e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24659188   24 KAPAKVTPVETATPSAAPPLSSKKVAKAPAVA-----LKNLDLAMKESAKKAAEAADQKLVSKAKKGQNASRKNLMQVPE 98
Cdd:PRK05035 556 RAKAKKAAQQAANAEAEEEVDPKKAAVAAAIArakakKAAQQAASAEPEEQVAEVDPKKAAVAAAIARAKAKKAEQQANA 635
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 24659188   99 PVAPEVDNKKKSAPpkrgnAEIPTVvPAKKAALVQEKPKEQAAAAPKAENVEVPAAKAKSVK 160
Cdd:PRK05035 636 EPEEPVDPRKAAVA-----AAIARA-KARKAAQQQANAEPEEAEDPKKAAVAAAIARAKAKK 691
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
107-187 8.61e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 37.95  E-value: 8.61e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24659188   107 KKKSAPPKRGNAEIPTVVPAKKAALVQEKPKEQAAAAPKAENVEVPAAKAKSVKKSLATPANPKPKPKRTK--------- 177
Cdd:PRK12270   35 DYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAaapaaaave 114
                          90
                  ....*....|....*
gi 24659188   178 ---NVLRG--KRLAK 187
Cdd:PRK12270  115 devTPLRGaaAAVAK 129
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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