Autophagy-related 2, isoform A [Drosophila melanogaster]
Chorein_N and ATG_C domain-containing protein( domain architecture ID 10576638)
protein containing domains Chorein_N, ATG2_CAD, and ATG_C
List of domain hits
Name | Accession | Description | Interval | E-value | |||
ATG_C | pfam09333 | Autophagy-related protein C terminal domain; ATG2 (also known as Apg2) is a peripheral ... |
1814-1902 | 1.74e-30 | |||
Autophagy-related protein C terminal domain; ATG2 (also known as Apg2) is a peripheral membrane protein. It functions in both cytoplasm-to-vacuole targeting and in autophagy. : Pssm-ID: 462761 [Multi-domain] Cd Length: 96 Bit Score: 116.45 E-value: 1.74e-30
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Chorein_N | pfam12624 | N-terminal region of Chorein or VPS13; Although mutations in the full-length vacuolar protein ... |
13-117 | 2.38e-22 | |||
N-terminal region of Chorein or VPS13; Although mutations in the full-length vacuolar protein sorting 13A (VPS13A) protein in vertebrates lead to the disease of chorea-acanthocytosis, the exact function of any of the regions within the protein is not yet known. This region is the proposed leucine zipper at the N-terminus. The full-length protein is a transmembrane protein with a presumed role in vesicle-mediated sorting and intracellular protein transport. : Pssm-ID: 463646 Cd Length: 116 Bit Score: 93.78 E-value: 2.38e-22
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ATG2_CAD super family | cl16238 | Autophagy-related protein 2 CAD motif; The Atg2 protein, an integral membrane protein, is ... |
1116-1185 | 9.52e-03 | |||
Autophagy-related protein 2 CAD motif; The Atg2 protein, an integral membrane protein, is required for a range of functions including the regulation of autophagy in conjunction with the Atg1-Atg13 complex. Atg2 binds Atg9. The precise function of this region, with its characteriztic highly conserved CAD sequence motif, is not known. The actual alignment was detected with superfamily member pfam13329: Pssm-ID: 433120 Cd Length: 155 Bit Score: 38.76 E-value: 9.52e-03
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Name | Accession | Description | Interval | E-value | |||
ATG_C | pfam09333 | Autophagy-related protein C terminal domain; ATG2 (also known as Apg2) is a peripheral ... |
1814-1902 | 1.74e-30 | |||
Autophagy-related protein C terminal domain; ATG2 (also known as Apg2) is a peripheral membrane protein. It functions in both cytoplasm-to-vacuole targeting and in autophagy. Pssm-ID: 462761 [Multi-domain] Cd Length: 96 Bit Score: 116.45 E-value: 1.74e-30
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Chorein_N | pfam12624 | N-terminal region of Chorein or VPS13; Although mutations in the full-length vacuolar protein ... |
13-117 | 2.38e-22 | |||
N-terminal region of Chorein or VPS13; Although mutations in the full-length vacuolar protein sorting 13A (VPS13A) protein in vertebrates lead to the disease of chorea-acanthocytosis, the exact function of any of the regions within the protein is not yet known. This region is the proposed leucine zipper at the N-terminus. The full-length protein is a transmembrane protein with a presumed role in vesicle-mediated sorting and intracellular protein transport. Pssm-ID: 463646 Cd Length: 116 Bit Score: 93.78 E-value: 2.38e-22
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MRS6 | COG5043 | Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]; |
18-87 | 3.13e-05 | |||
Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]; Pssm-ID: 227376 [Multi-domain] Cd Length: 2552 Bit Score: 49.50 E-value: 3.13e-05
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ATG2_CAD | pfam13329 | Autophagy-related protein 2 CAD motif; The Atg2 protein, an integral membrane protein, is ... |
1116-1185 | 9.52e-03 | |||
Autophagy-related protein 2 CAD motif; The Atg2 protein, an integral membrane protein, is required for a range of functions including the regulation of autophagy in conjunction with the Atg1-Atg13 complex. Atg2 binds Atg9. The precise function of this region, with its characteriztic highly conserved CAD sequence motif, is not known. Pssm-ID: 433120 Cd Length: 155 Bit Score: 38.76 E-value: 9.52e-03
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Name | Accession | Description | Interval | E-value | |||
ATG_C | pfam09333 | Autophagy-related protein C terminal domain; ATG2 (also known as Apg2) is a peripheral ... |
1814-1902 | 1.74e-30 | |||
Autophagy-related protein C terminal domain; ATG2 (also known as Apg2) is a peripheral membrane protein. It functions in both cytoplasm-to-vacuole targeting and in autophagy. Pssm-ID: 462761 [Multi-domain] Cd Length: 96 Bit Score: 116.45 E-value: 1.74e-30
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Chorein_N | pfam12624 | N-terminal region of Chorein or VPS13; Although mutations in the full-length vacuolar protein ... |
13-117 | 2.38e-22 | |||
N-terminal region of Chorein or VPS13; Although mutations in the full-length vacuolar protein sorting 13A (VPS13A) protein in vertebrates lead to the disease of chorea-acanthocytosis, the exact function of any of the regions within the protein is not yet known. This region is the proposed leucine zipper at the N-terminus. The full-length protein is a transmembrane protein with a presumed role in vesicle-mediated sorting and intracellular protein transport. Pssm-ID: 463646 Cd Length: 116 Bit Score: 93.78 E-value: 2.38e-22
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MRS6 | COG5043 | Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]; |
18-87 | 3.13e-05 | |||
Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]; Pssm-ID: 227376 [Multi-domain] Cd Length: 2552 Bit Score: 49.50 E-value: 3.13e-05
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ATG2_CAD | pfam13329 | Autophagy-related protein 2 CAD motif; The Atg2 protein, an integral membrane protein, is ... |
1116-1185 | 9.52e-03 | |||
Autophagy-related protein 2 CAD motif; The Atg2 protein, an integral membrane protein, is required for a range of functions including the regulation of autophagy in conjunction with the Atg1-Atg13 complex. Atg2 binds Atg9. The precise function of this region, with its characteriztic highly conserved CAD sequence motif, is not known. Pssm-ID: 433120 Cd Length: 155 Bit Score: 38.76 E-value: 9.52e-03
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Blast search parameters | ||||
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