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Conserved domains on  [gi|24658128|ref|NP_647942|]
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ATP synthase, coupling factor 6-like [Drosophila melanogaster]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP-synt_F6 super family cl05199
Mitochondrial ATP synthase coupling factor 6; Coupling factor 6 (F6) is a component of ...
 9-87 1.13e-20

Mitochondrial ATP synthase coupling factor 6; Coupling factor 6 (F6) is a component of mitochondrial ATP synthase which is required for the interactions of the catalytic and proton-translocating segments.


The actual alignment was detected with superfamily member pfam05511:

Pssm-ID: 461669  Cd Length: 96  Bit Score: 80.51  E-value: 1.13e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24658128     9 SLVLCRSVSNTASLRYK--DPIYQIFLDKVREYRLKS-PKGKPVDPGPEFEAELKEVTERLALQYGGGegvDMLEFPKFK 85
Cdd:pfam05511  18 SVHLRRNIGISAVAFNKalDPVQKLFVDKIREYNTKSkSSGGLVDAGPEYQKELKEELTKLARQYGGG---DMTKFPDFK 94


                  ..
gi 24658128    86 LP 87
Cdd:pfam05511  95 FE 96
 
Name Accession Description Interval E-value
ATP-synt_F6 pfam05511
Mitochondrial ATP synthase coupling factor 6; Coupling factor 6 (F6) is a component of ...
 9-87 1.13e-20

Mitochondrial ATP synthase coupling factor 6; Coupling factor 6 (F6) is a component of mitochondrial ATP synthase which is required for the interactions of the catalytic and proton-translocating segments.


Pssm-ID: 461669  Cd Length: 96  Bit Score: 80.51  E-value: 1.13e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24658128     9 SLVLCRSVSNTASLRYK--DPIYQIFLDKVREYRLKS-PKGKPVDPGPEFEAELKEVTERLALQYGGGegvDMLEFPKFK 85
Cdd:pfam05511  18 SVHLRRNIGISAVAFNKalDPVQKLFVDKIREYNTKSkSSGGLVDAGPEYQKELKEELTKLARQYGGG---DMTKFPDFK 94


                  ..
gi 24658128    86 LP 87
Cdd:pfam05511  95 FE 96
 
Name Accession Description Interval E-value
ATP-synt_F6 pfam05511
Mitochondrial ATP synthase coupling factor 6; Coupling factor 6 (F6) is a component of ...
 9-87 1.13e-20

Mitochondrial ATP synthase coupling factor 6; Coupling factor 6 (F6) is a component of mitochondrial ATP synthase which is required for the interactions of the catalytic and proton-translocating segments.


Pssm-ID: 461669  Cd Length: 96  Bit Score: 80.51  E-value: 1.13e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24658128     9 SLVLCRSVSNTASLRYK--DPIYQIFLDKVREYRLKS-PKGKPVDPGPEFEAELKEVTERLALQYGGGegvDMLEFPKFK 85
Cdd:pfam05511  18 SVHLRRNIGISAVAFNKalDPVQKLFVDKIREYNTKSkSSGGLVDAGPEYQKELKEELTKLARQYGGG---DMTKFPDFK 94


                  ..
gi 24658128    86 LP 87
Cdd:pfam05511  95 FE 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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