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Conserved domains on  [gi|21355689|ref|NP_651095|]
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rumi, isoform A [Drosophila melanogaster]

Protein Classification

glycosyltransferase family protein( domain architecture ID 10653334)

glycosyltransferase family protein may synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CAP10 smart00672
Putative lipopolysaccharide-modifying enzyme;
139-394 7.11e-123

Putative lipopolysaccharide-modifying enzyme;


:

Pssm-ID: 214773  Cd Length: 256  Bit Score: 356.35  E-value: 7.11e-123
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21355689    139 TLPDMDLIINTRDYPQLNAAWGNA----AGGPVFSFSKTKEYRDIMYPAWTFWAGgpatklHPRGIGR-WDQMREKLEKR 213
Cdd:smart00672   1 RVPDLELMFNCRDWPLINKKSFASynqhAPPPLFSYCGSDEYLDIVFPDWSFWAG------WPEVNGRpWDKDLMELEEG 74
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21355689    214 AAAIPWSQKRSLGFFRGSRTSD-ERDSLILLSRRNPELVEAQYTKNQGWKSPKDTLDAPAADEVSFEDHCKYKYLFNFRG 292
Cdd:smart00672  75 NKRTKWSDKNAYAYWRGNPTVAsERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEG 154
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21355689    293 VAASFRLKHLFLCKSLVFHVGDEWQEFFYDQLKPWVHYVPLKSYPSQQEYEHILSFFKKNDALAQEIAQRGYDFIWEHLR 372
Cdd:smart00672 155 VAWSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCRELKEAVDWGNEHDKKAQEIGKRGSEFIQQNLS 234
                          250       260
                   ....*....|....*....|..
gi 21355689    373 MKDIKCYWRKLLKRYVKLLQYE 394
Cdd:smart00672 235 MEDVYDYMFHLLQEYAKLLKYK 256
 
Name Accession Description Interval E-value
CAP10 smart00672
Putative lipopolysaccharide-modifying enzyme;
139-394 7.11e-123

Putative lipopolysaccharide-modifying enzyme;


Pssm-ID: 214773  Cd Length: 256  Bit Score: 356.35  E-value: 7.11e-123
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21355689    139 TLPDMDLIINTRDYPQLNAAWGNA----AGGPVFSFSKTKEYRDIMYPAWTFWAGgpatklHPRGIGR-WDQMREKLEKR 213
Cdd:smart00672   1 RVPDLELMFNCRDWPLINKKSFASynqhAPPPLFSYCGSDEYLDIVFPDWSFWAG------WPEVNGRpWDKDLMELEEG 74
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21355689    214 AAAIPWSQKRSLGFFRGSRTSD-ERDSLILLSRRNPELVEAQYTKNQGWKSPKDTLDAPAADEVSFEDHCKYKYLFNFRG 292
Cdd:smart00672  75 NKRTKWSDKNAYAYWRGNPTVAsERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEG 154
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21355689    293 VAASFRLKHLFLCKSLVFHVGDEWQEFFYDQLKPWVHYVPLKSYPSQQEYEHILSFFKKNDALAQEIAQRGYDFIWEHLR 372
Cdd:smart00672 155 VAWSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCRELKEAVDWGNEHDKKAQEIGKRGSEFIQQNLS 234
                          250       260
                   ....*....|....*....|..
gi 21355689    373 MKDIKCYWRKLLKRYVKLLQYE 394
Cdd:smart00672 235 MEDVYDYMFHLLQEYAKLLKYK 256
Glyco_transf_90 pfam05686
Glycosyl transferase family 90; This family of glycosyl transferases are specifically ...
73-407 1.79e-110

Glycosyl transferase family 90; This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.


Pssm-ID: 310354  Cd Length: 396  Bit Score: 329.82  E-value: 1.79e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21355689    73 CSCHANVLKRDLAPYKSTGVTRQMIE-SSARYGTKYKIYGHRLYRDA-NCMFPAR----CEGIEHFLLPLVATLPDMDLI 146
Cdd:pfam05686   6 CPDYFRWIHEDLEPWRETGITREMVErAKRKAHFRYVIINGRVYVETyGESFQTRdvftIWGILQLLRKYPGRLPDLELM 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21355689   147 INTRDYPQLNAA---WGNAAGGPVFSFSKTKEYRDIMYPAWTFWaGGPATklhprGIGRWDQMREKLEKRAAAIPWSQKR 223
Cdd:pfam05686  86 FNCGDWPVVKKRdyrGPNANPPPLFSYCGDDDTLDIVFPDWSFW-GWPEV-----NIGRWDLLRKDLKEGNTRVKWEDRE 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21355689   224 SLGFFRGSRTSDE-RDSLILLSRRNPELVEAQYTkNQGWkspkDTLDAPAADEVSFEDHCKYKYLFNFRGVAASFRLKHL 302
Cdd:pfam05686 160 PYAYWRGNPSVAEtRLELVKCNRSNPEDWDARLT-NQDW----DTEYRPGFKHSSLVDQCTHKYKIYIEGVAWSVSLKYI 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21355689   303 FLCKSLVFHVGDEWQEFFYDQLKPWVHYVPLKSYPSQQEYEHILSFFKKNDALAQEIAQRGYDFIWEHLRMKDIKCYWRK 382
Cdd:pfam05686 235 LACDSLVLHVGPEYYDFFYRGLKPWVHYWPIKSDDDCRDLKEAVDWGNAHDDEAQKIAERGSEFIRENLKMDDVYDYMFH 314
                         330       340
                  ....*....|....*....|....*
gi 21355689   383 LLKRYVKLLQYEVKPEDQLIYIGPK 407
Cdd:pfam05686 315 LLTEYAKLLKYKPTVPKGAVEVCPE 339
 
Name Accession Description Interval E-value
CAP10 smart00672
Putative lipopolysaccharide-modifying enzyme;
139-394 7.11e-123

Putative lipopolysaccharide-modifying enzyme;


Pssm-ID: 214773  Cd Length: 256  Bit Score: 356.35  E-value: 7.11e-123
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21355689    139 TLPDMDLIINTRDYPQLNAAWGNA----AGGPVFSFSKTKEYRDIMYPAWTFWAGgpatklHPRGIGR-WDQMREKLEKR 213
Cdd:smart00672   1 RVPDLELMFNCRDWPLINKKSFASynqhAPPPLFSYCGSDEYLDIVFPDWSFWAG------WPEVNGRpWDKDLMELEEG 74
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21355689    214 AAAIPWSQKRSLGFFRGSRTSD-ERDSLILLSRRNPELVEAQYTKNQGWKSPKDTLDAPAADEVSFEDHCKYKYLFNFRG 292
Cdd:smart00672  75 NKRTKWSDKNAYAYWRGNPTVAsERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEG 154
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21355689    293 VAASFRLKHLFLCKSLVFHVGDEWQEFFYDQLKPWVHYVPLKSYPSQQEYEHILSFFKKNDALAQEIAQRGYDFIWEHLR 372
Cdd:smart00672 155 VAWSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCRELKEAVDWGNEHDKKAQEIGKRGSEFIQQNLS 234
                          250       260
                   ....*....|....*....|..
gi 21355689    373 MKDIKCYWRKLLKRYVKLLQYE 394
Cdd:smart00672 235 MEDVYDYMFHLLQEYAKLLKYK 256
Glyco_transf_90 pfam05686
Glycosyl transferase family 90; This family of glycosyl transferases are specifically ...
73-407 1.79e-110

Glycosyl transferase family 90; This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.


Pssm-ID: 310354  Cd Length: 396  Bit Score: 329.82  E-value: 1.79e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21355689    73 CSCHANVLKRDLAPYKSTGVTRQMIE-SSARYGTKYKIYGHRLYRDA-NCMFPAR----CEGIEHFLLPLVATLPDMDLI 146
Cdd:pfam05686   6 CPDYFRWIHEDLEPWRETGITREMVErAKRKAHFRYVIINGRVYVETyGESFQTRdvftIWGILQLLRKYPGRLPDLELM 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21355689   147 INTRDYPQLNAA---WGNAAGGPVFSFSKTKEYRDIMYPAWTFWaGGPATklhprGIGRWDQMREKLEKRAAAIPWSQKR 223
Cdd:pfam05686  86 FNCGDWPVVKKRdyrGPNANPPPLFSYCGDDDTLDIVFPDWSFW-GWPEV-----NIGRWDLLRKDLKEGNTRVKWEDRE 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21355689   224 SLGFFRGSRTSDE-RDSLILLSRRNPELVEAQYTkNQGWkspkDTLDAPAADEVSFEDHCKYKYLFNFRGVAASFRLKHL 302
Cdd:pfam05686 160 PYAYWRGNPSVAEtRLELVKCNRSNPEDWDARLT-NQDW----DTEYRPGFKHSSLVDQCTHKYKIYIEGVAWSVSLKYI 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21355689   303 FLCKSLVFHVGDEWQEFFYDQLKPWVHYVPLKSYPSQQEYEHILSFFKKNDALAQEIAQRGYDFIWEHLRMKDIKCYWRK 382
Cdd:pfam05686 235 LACDSLVLHVGPEYYDFFYRGLKPWVHYWPIKSDDDCRDLKEAVDWGNAHDDEAQKIAERGSEFIRENLKMDDVYDYMFH 314
                         330       340
                  ....*....|....*....|....*
gi 21355689   383 LLKRYVKLLQYEVKPEDQLIYIGPK 407
Cdd:pfam05686 315 LLTEYAKLLKYKPTVPKGAVEVCPE 339
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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