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Conserved domains on  [gi|1937910201|ref|NP_653340|]
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flavin-containing monooxygenase 5 [Rattus norvegicus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FMO-like pfam00743
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ...
 3-532 0e+00

Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.


:

Pssm-ID: 395602 [Multi-domain]  Cd Length: 531  Bit Score: 1001.99  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201   3 KKRIAVIGSGASGLTCIKCCLEEGLEPVCFEMSDDIGGLWRYQENPEEGRASIYKSVIINTSKEMMCFSDYPIPDHYPNF 82
Cdd:pfam00743   1 AKKVAVIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRFTENVEEGRASIYKSVITNTSKEMSCFSDFPFPEDYPNF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201  83 MHNSQVLEYFRMYAKEFGLLKYIQFKTTVCSVKKQPDFSTSGQWQVVTEHEGKEQVDVFDGVLVCTGHHTDPHLPLDSFP 162
Cdd:pfam00743  81 MHNSKFLEYFRMFAKEFDLLKYIQFKTTVCSVKKRPDFSTSGQWEVVTEHEGKQESAVFDAVMVCTGHHTNPHLPLESFP 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 163 GIEKFKGKYFHSREYKNPVEFTGKRVIVIGIGNSGGDLAVEISHTAKQVFLSTRRGAWILNRVGKHGYPIDILLSSRITN 242
Cdd:pfam00743 161 GIEKFKGQYFHSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRRGSWVLSRVSDHGYPWDMLFSTRFTS 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 243 YLSKICGSALKNRYMEKQLNQRFDHEMFGLKPKHSALGQHPTINDDLPNRIISGLVKVKGNVKEFTETAAIFEDGSREDD 322
Cdd:pfam00743 241 FLRNILPTSISNWLMEKQMNRRFNHENYGLKPKNRALSKEPVVNDDLPNRILCGAVKVKPNVKEFTETSAIFEDGTVEED 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 323 IDVVIFATGYSFAFPFLEDS-VKVVQNKVSLYKKVFPPNLEKPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKKLPS 401
Cdd:pfam00743 321 IDVVIFATGYTFAFPFLEESlVKVENNKVSLYKYVFPPNLEKPTLAIIGLIQPLGSIIPTVELQARWATRVFKGLCTLPS 400

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 402 QSEMMAEINKTREEMAKRYVDSQRHTIQGDYIDTMEEIADLVGVRPNLLSLAFTDPKLAFQLLVGPCTPVQYRLQGPGKW 481
Cdd:pfam00743 401 QSEMMAEINKRQEKKIKRFGDSQSHTIQTDYIDYMDELALFIGAKPNLLSLLLTDPKLALKLFFGPCTPYQYRLVGPGKW 480

                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1937910201 482 AGARKTILTTEDRIRKPLMTRVVERDSSGTSLVTVRVLMLAVTFLAVILAY 532
Cdd:pfam00743 481 EGARNAILTQWDRILKPLKTRVVEKSSSPASSFTLKIFGLPVVLVAIFLIL 531
 
Name Accession Description Interval E-value
FMO-like pfam00743
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ...
 3-532 0e+00

Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.


Pssm-ID: 395602 [Multi-domain]  Cd Length: 531  Bit Score: 1001.99  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201   3 KKRIAVIGSGASGLTCIKCCLEEGLEPVCFEMSDDIGGLWRYQENPEEGRASIYKSVIINTSKEMMCFSDYPIPDHYPNF 82
Cdd:pfam00743   1 AKKVAVIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRFTENVEEGRASIYKSVITNTSKEMSCFSDFPFPEDYPNF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201  83 MHNSQVLEYFRMYAKEFGLLKYIQFKTTVCSVKKQPDFSTSGQWQVVTEHEGKEQVDVFDGVLVCTGHHTDPHLPLDSFP 162
Cdd:pfam00743  81 MHNSKFLEYFRMFAKEFDLLKYIQFKTTVCSVKKRPDFSTSGQWEVVTEHEGKQESAVFDAVMVCTGHHTNPHLPLESFP 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 163 GIEKFKGKYFHSREYKNPVEFTGKRVIVIGIGNSGGDLAVEISHTAKQVFLSTRRGAWILNRVGKHGYPIDILLSSRITN 242
Cdd:pfam00743 161 GIEKFKGQYFHSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRRGSWVLSRVSDHGYPWDMLFSTRFTS 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 243 YLSKICGSALKNRYMEKQLNQRFDHEMFGLKPKHSALGQHPTINDDLPNRIISGLVKVKGNVKEFTETAAIFEDGSREDD 322
Cdd:pfam00743 241 FLRNILPTSISNWLMEKQMNRRFNHENYGLKPKNRALSKEPVVNDDLPNRILCGAVKVKPNVKEFTETSAIFEDGTVEED 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 323 IDVVIFATGYSFAFPFLEDS-VKVVQNKVSLYKKVFPPNLEKPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKKLPS 401
Cdd:pfam00743 321 IDVVIFATGYTFAFPFLEESlVKVENNKVSLYKYVFPPNLEKPTLAIIGLIQPLGSIIPTVELQARWATRVFKGLCTLPS 400

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 402 QSEMMAEINKTREEMAKRYVDSQRHTIQGDYIDTMEEIADLVGVRPNLLSLAFTDPKLAFQLLVGPCTPVQYRLQGPGKW 481
Cdd:pfam00743 401 QSEMMAEINKRQEKKIKRFGDSQSHTIQTDYIDYMDELALFIGAKPNLLSLLLTDPKLALKLFFGPCTPYQYRLVGPGKW 480

                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1937910201 482 AGARKTILTTEDRIRKPLMTRVVERDSSGTSLVTVRVLMLAVTFLAVILAY 532
Cdd:pfam00743 481 EGARNAILTQWDRILKPLKTRVVEKSSSPASSFTLKIFGLPVVLVAIFLIL 531
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 1-398 7.00e-91

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 284.45  E-value: 7.00e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201   1 MAKKRIAVIGSGASGLTCIKCCLEEGLEPVCFEMSDDIGGLWRYQEnpeegrasiYKSVIINTSKEMMCFSDYPIPDHYP 80
Cdd:COG2072     4 TEHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTWRDNR---------YPGLRLDTPSHLYSLPFFPNWSDDP 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201  81 NFMHNSQVLEYFRMYAKEFGLLKYIQFKTTVCSVKKQPDfstSGQWQVVTEHeGKEQVdvFDGVLVCTGHHTDPHLPldS 160
Cdd:COG2072    75 DFPTGDEILAYLEAYADKFGLRRPIRFGTEVTSARWDEA---DGRWTVTTDD-GETLT--ARFVVVATGPLSRPKIP--D 146

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 161 FPGIEKFKGKYFHSREYKNPVEFTGKRVIVIGIGNSGGDLAVEISHTAKQVFLSTRRGAWILNRvgkHGYPIDILlssRI 240
Cdd:COG2072   147 IPGLEDFAGEQLHSADWRNPVDLAGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLPR---PNYDPERG---RP 220

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 241 TNYLSKICGSALKNRYMEKQLNQRFDHEMFG-----LKPKHSALGQHPTINDDLPNRIISGLVK-VKGNVKEFTETAAIF 314
Cdd:COG2072   221 ANYLGLEAPPALNRRDARAWLRRLLRAQVKDpelglLTPDYPPGCKRPLLSTDYYEALRRGNVElVTGGIERITEDGVVF 300

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 315 EDGSREdDIDVVIFATGYSFAFPFLeDSVKVV----QNKVSLYKKVFPPNLekPTLAIIGLIQPLG--AIMPISELQGRW 388
Cdd:COG2072   301 ADGTEH-EVDVIVWATGFRADLPWL-APLDVRgrdgRSGPRAYLGVVVPGF--PNLFFLGPNSPSGhsSLTLGAERQARY 376

                         410
                  ....*....|
gi 1937910201 389 ATQVFKGLKK 398
Cdd:COG2072   377 IARLIAHMRR 386
PLN02172 PLN02172
flavin-containing monooxygenase FMO GS-OX
 4-447 5.95e-48

flavin-containing monooxygenase FMO GS-OX


Pssm-ID: 215116 [Multi-domain]  Cd Length: 461  Bit Score: 172.74  E-value: 5.95e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201   4 KRIAVIGSGASGLTCIKCCLEEGLEPVCFEMSDDIGGLWRYQENPEEG-----------RASIYKSVIINTSKEMMCFSD 72
Cdd:PLN02172   11 QHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVYTPKSESDplsldptrsivHSSVYESLRTNLPRECMGYRD 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201  73 YPI----------PDHYPNFMhnsQVLEYFRMYAKEFGLLKYIQFKTTVcsVKKQPdfsTSGQWQVVTEHEGKEQVD-VF 141
Cdd:PLN02172   91 FPFvprfddesrdSRRYPSHR---EVLAYLQDFAREFKIEEMVRFETEV--VRVEP---VDGKWRVQSKNSGGFSKDeIF 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 142 DGVLVCTGHHTDPHLPldSFPGIEKFKGKYFHSREYKNPVEFTGKRVIVIGIGNSGGDLAVEISHTAKQVFLSTRrgawi 221
Cdd:PLN02172  163 DAVVVCNGHYTEPNVA--HIPGIKSWPGKQIHSHNYRVPDPFKNEVVVVIGNFASGADISRDIAKVAKEVHIASR----- 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 222 lnrvgkhgypidillsSRITNYLSKICGSAlKNRYMEKQLNqrFDHEmfglkpkhsalgqhptinddlpnriisglvkvk 301
Cdd:PLN02172  236 ----------------ASESDTYEKLPVPQ-NNLWMHSEID--TAHE--------------------------------- 263

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 302 gnvkeftETAAIFEDGsREDDIDVVIFATGYSFAFPFLEDS--VKVVQNKVS-LYKKVFPPNLeKPTLAIIGLiQPLGAI 378
Cdd:PLN02172  264 -------DGSIVFKNG-KVVYADTIVHCTGYKYHFPFLETNgyMRIDENRVEpLYKHVFPPAL-APGLSFIGL-PAMGIQ 333

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1937910201 379 MPISELQGRWATQVFKGLKKLPSQSEMMAEIN---KTREEMA--KRYVdsqrHTIQGDYIDTMEEIADLVGVRP 447
Cdd:PLN02172  334 FVMFEIQSKWVAAVLSGRVTLPSEDKMMEDINawyASLEALGipKRYT----HKLGKIQSEYLNWIAEECGCPL 403
 
Name Accession Description Interval E-value
FMO-like pfam00743
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ...
 3-532 0e+00

Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.


Pssm-ID: 395602 [Multi-domain]  Cd Length: 531  Bit Score: 1001.99  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201   3 KKRIAVIGSGASGLTCIKCCLEEGLEPVCFEMSDDIGGLWRYQENPEEGRASIYKSVIINTSKEMMCFSDYPIPDHYPNF 82
Cdd:pfam00743   1 AKKVAVIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRFTENVEEGRASIYKSVITNTSKEMSCFSDFPFPEDYPNF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201  83 MHNSQVLEYFRMYAKEFGLLKYIQFKTTVCSVKKQPDFSTSGQWQVVTEHEGKEQVDVFDGVLVCTGHHTDPHLPLDSFP 162
Cdd:pfam00743  81 MHNSKFLEYFRMFAKEFDLLKYIQFKTTVCSVKKRPDFSTSGQWEVVTEHEGKQESAVFDAVMVCTGHHTNPHLPLESFP 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 163 GIEKFKGKYFHSREYKNPVEFTGKRVIVIGIGNSGGDLAVEISHTAKQVFLSTRRGAWILNRVGKHGYPIDILLSSRITN 242
Cdd:pfam00743 161 GIEKFKGQYFHSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRRGSWVLSRVSDHGYPWDMLFSTRFTS 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 243 YLSKICGSALKNRYMEKQLNQRFDHEMFGLKPKHSALGQHPTINDDLPNRIISGLVKVKGNVKEFTETAAIFEDGSREDD 322
Cdd:pfam00743 241 FLRNILPTSISNWLMEKQMNRRFNHENYGLKPKNRALSKEPVVNDDLPNRILCGAVKVKPNVKEFTETSAIFEDGTVEED 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 323 IDVVIFATGYSFAFPFLEDS-VKVVQNKVSLYKKVFPPNLEKPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKKLPS 401
Cdd:pfam00743 321 IDVVIFATGYTFAFPFLEESlVKVENNKVSLYKYVFPPNLEKPTLAIIGLIQPLGSIIPTVELQARWATRVFKGLCTLPS 400

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 402 QSEMMAEINKTREEMAKRYVDSQRHTIQGDYIDTMEEIADLVGVRPNLLSLAFTDPKLAFQLLVGPCTPVQYRLQGPGKW 481
Cdd:pfam00743 401 QSEMMAEINKRQEKKIKRFGDSQSHTIQTDYIDYMDELALFIGAKPNLLSLLLTDPKLALKLFFGPCTPYQYRLVGPGKW 480

                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1937910201 482 AGARKTILTTEDRIRKPLMTRVVERDSSGTSLVTVRVLMLAVTFLAVILAY 532
Cdd:pfam00743 481 EGARNAILTQWDRILKPLKTRVVEKSSSPASSFTLKIFGLPVVLVAIFLIL 531
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 1-398 7.00e-91

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 284.45  E-value: 7.00e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201   1 MAKKRIAVIGSGASGLTCIKCCLEEGLEPVCFEMSDDIGGLWRYQEnpeegrasiYKSVIINTSKEMMCFSDYPIPDHYP 80
Cdd:COG2072     4 TEHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTWRDNR---------YPGLRLDTPSHLYSLPFFPNWSDDP 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201  81 NFMHNSQVLEYFRMYAKEFGLLKYIQFKTTVCSVKKQPDfstSGQWQVVTEHeGKEQVdvFDGVLVCTGHHTDPHLPldS 160
Cdd:COG2072    75 DFPTGDEILAYLEAYADKFGLRRPIRFGTEVTSARWDEA---DGRWTVTTDD-GETLT--ARFVVVATGPLSRPKIP--D 146

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 161 FPGIEKFKGKYFHSREYKNPVEFTGKRVIVIGIGNSGGDLAVEISHTAKQVFLSTRRGAWILNRvgkHGYPIDILlssRI 240
Cdd:COG2072   147 IPGLEDFAGEQLHSADWRNPVDLAGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLPR---PNYDPERG---RP 220

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 241 TNYLSKICGSALKNRYMEKQLNQRFDHEMFG-----LKPKHSALGQHPTINDDLPNRIISGLVK-VKGNVKEFTETAAIF 314
Cdd:COG2072   221 ANYLGLEAPPALNRRDARAWLRRLLRAQVKDpelglLTPDYPPGCKRPLLSTDYYEALRRGNVElVTGGIERITEDGVVF 300

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 315 EDGSREdDIDVVIFATGYSFAFPFLeDSVKVV----QNKVSLYKKVFPPNLekPTLAIIGLIQPLG--AIMPISELQGRW 388
Cdd:COG2072   301 ADGTEH-EVDVIVWATGFRADLPWL-APLDVRgrdgRSGPRAYLGVVVPGF--PNLFFLGPNSPSGhsSLTLGAERQARY 376

                         410
                  ....*....|
gi 1937910201 389 ATQVFKGLKK 398
Cdd:COG2072   377 IARLIAHMRR 386
PLN02172 PLN02172
flavin-containing monooxygenase FMO GS-OX
 4-447 5.95e-48

flavin-containing monooxygenase FMO GS-OX


Pssm-ID: 215116 [Multi-domain]  Cd Length: 461  Bit Score: 172.74  E-value: 5.95e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201   4 KRIAVIGSGASGLTCIKCCLEEGLEPVCFEMSDDIGGLWRYQENPEEG-----------RASIYKSVIINTSKEMMCFSD 72
Cdd:PLN02172   11 QHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVYTPKSESDplsldptrsivHSSVYESLRTNLPRECMGYRD 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201  73 YPI----------PDHYPNFMhnsQVLEYFRMYAKEFGLLKYIQFKTTVcsVKKQPdfsTSGQWQVVTEHEGKEQVD-VF 141
Cdd:PLN02172   91 FPFvprfddesrdSRRYPSHR---EVLAYLQDFAREFKIEEMVRFETEV--VRVEP---VDGKWRVQSKNSGGFSKDeIF 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 142 DGVLVCTGHHTDPHLPldSFPGIEKFKGKYFHSREYKNPVEFTGKRVIVIGIGNSGGDLAVEISHTAKQVFLSTRrgawi 221
Cdd:PLN02172  163 DAVVVCNGHYTEPNVA--HIPGIKSWPGKQIHSHNYRVPDPFKNEVVVVIGNFASGADISRDIAKVAKEVHIASR----- 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 222 lnrvgkhgypidillsSRITNYLSKICGSAlKNRYMEKQLNqrFDHEmfglkpkhsalgqhptinddlpnriisglvkvk 301
Cdd:PLN02172  236 ----------------ASESDTYEKLPVPQ-NNLWMHSEID--TAHE--------------------------------- 263

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 302 gnvkeftETAAIFEDGsREDDIDVVIFATGYSFAFPFLEDS--VKVVQNKVS-LYKKVFPPNLeKPTLAIIGLiQPLGAI 378
Cdd:PLN02172  264 -------DGSIVFKNG-KVVYADTIVHCTGYKYHFPFLETNgyMRIDENRVEpLYKHVFPPAL-APGLSFIGL-PAMGIQ 333

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1937910201 379 MPISELQGRWATQVFKGLKKLPSQSEMMAEIN---KTREEMA--KRYVdsqrHTIQGDYIDTMEEIADLVGVRP 447
Cdd:PLN02172  334 FVMFEIQSKWVAAVLSGRVTLPSEDKMMEDINawyASLEALGipKRYT----HKLGKIQSEYLNWIAEECGCPL 403
Pyr_redox_3 pfam13738
Pyridine nucleotide-disulphide oxidoreductase;
58-343 2.02e-15

Pyridine nucleotide-disulphide oxidoreductase;


Pssm-ID: 404603 [Multi-domain]  Cd Length: 296  Bit Score: 76.88  E-value: 2.02e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201  58 SVIINTSKEMMCFSDYPipdhypnfmHNSQVLEYFRMYAKEFGLLkyIQFKTTVCSVKKQpdfstSGQWQVVTEHEgkeq 137
Cdd:pfam13738  56 AISPGTSPAFTFNREHP---------SGNEYAEYLRRVADHFELP--INLFEEVTSVKKE-----DDGFVVTTSKG---- 115

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 138 vdVF--DGVLVCTGHHTDPHLPLDSFPGIekfkgkyfHSREYKNPVEFTGKRVIVIGIGNSGGDLAVEISHTAKQVFLST 215
Cdd:pfam13738 116 --TYqaRYVIIATGEFDFPNKLGVPELPK--------HYSYVKDFHPYAGQKVVVIGGYNSAVDAALELVRKGARVTVLY 185

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 216 RRGAWilnrvGKHGYPIDILLSSRItnylskicgsalKNRYMEKQLNQRfdhemfglkpkhsalgqhptinddlpnriis 295
Cdd:pfam13738 186 RGSEW-----EDRDSDPSYSLSPDT------------LNRLEELVKNGK------------------------------- 217

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1937910201 296 glVKVKGN--VKEFTETAAI----FEDGSREDDIDVVIFATGYSFAFPFLEDSV 343
Cdd:pfam13738 218 --IKAHFNaeVKEITEVDVSykvhTEDGRKVTSNDDPILATGYHPDLSFLKKGL 269
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
6-241 5.10e-07

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 51.66  E-value: 5.10e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201   6 IAVIGSGASGLTC-IKCCLEeGLEPVCFEmSDDIGGlwryqenpeegrasiyksvIINTSKEMmcfSDYPipdHYPNFMH 84
Cdd:COG0492     3 VVIIGAGPAGLTAaIYAARA-GLKTLVIE-GGEPGG-------------------QLATTKEI---ENYP---GFPEGIS 55

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201  85 NSQVLEYFRMYAKEFGllkyIQFKTT-VCSVKKqpdfsTSGQWQVVTEHEGKEQVDVfdgVLVCTGHHtDPHLPLdsfPG 163
Cdd:COG0492    56 GPELAERLREQAERFG----AEILLEeVTSVDK-----DDGPFRVTTDDGTEYEAKA---VIIATGAG-PRKLGL---PG 119

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201 164 IEKFKGK----------YFhsreyknpveFTGKRVIVIGIGNSGGDLAVEISHTAKQVFLSTR----RGAWIL-NRVGKH 228
Cdd:COG0492   120 EEEFEGRgvsycatcdgFF----------FRGKDVVVVGGGDSALEEALYLTKFASKVTLIHRrdelRASKILvERLRAN 189

                         250
                  ....*....|...
gi 1937910201 229 GyPIDILLSSRIT 241
Cdd:COG0492   190 P-KIEVLWNTEVT 201
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 4-209 1.13e-05

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 47.82  E-value: 1.13e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201   4 KRIAVIGSGASGLTC----IKccleEGLEPVCFEMSDDIGGLWRYQenpeegrasiyksviintskemmcfsdypIPDH- 78
Cdd:COG0493   122 KKVAVVGSGPAGLAAayqlAR----AGHEVTVFEALDKPGGLLRYG-----------------------------IPEFr 168

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201  79 YPNfmhnsQVLEYFRMYAKEFGllkyIQFKTTVcSVKKqpDFSTSgqwqvvtehEGKEQvdvFDGVLVCTGHHTDPHLPL 158
Cdd:COG0493   169 LPK-----DVLDREIELIEALG----VEFRTNV-EVGK--DITLD---------ELLEE---FDAVFLATGAGKPRDLGI 224

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1937910201 159 dsfPGiEKFKGKYF--------HSREYKNPVEFTGKRVIVIGignsGGDLAVEISHTAK 209
Cdd:COG0493   225 ---PG-EDLKGVHSamdfltavNLGEAPDTILAVGKRVVVIG----GGNTAMDCARTAL 275
gltD PRK12810
glutamate synthase subunit beta; Reviewed
 4-218 3.16e-05

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 46.31  E-value: 3.16e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201   4 KRIAVIGSGASGLTCIKCCLEEGLEPVCFEMSDDIGGLWRYqenpeeGrasiyksviintskemmcfsdypIPDhypnfm 83
Cdd:PRK12810  144 KKVAVVGSGPAGLAAADQLARAGHKVTVFERADRIGGLLRY------G-----------------------IPD------ 188

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1937910201  84 hnsqvleyFRMyAKEF-----GLLKY--IQFKTTVcSVKKQPDFstsgqwqvvtehegKEQVDVFDGVLVCTGHHTDPHL 156
Cdd:PRK12810  189 --------FKL-EKEVidrriELMEAegIEFRTNV-EVGKDITA--------------EELLAEYDAVFLGTGAYKPRDL 244

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1937910201 157 PldsFPGiEKFKGKYF-------HSR-----EYKNPVEFTGKRVIVIGignsGGDLAVE-----ISHTAKQVflsTRRG 218
Cdd:PRK12810  245 G---IPG-RDLDGVHFamdfliqNTRrvlgdETEPFISAKGKHVVVIG----GGDTGMDcvgtaIRQGAKSV---TQRD 312
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
8-49 1.15e-04

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 40.21  E-value: 1.15e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1937910201   8 VIGSGASGLTCIKCCLEEGLEPVCFEMSDDIGGLWRYQENPE 49
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGGNAYSYRVPG 42
Ppro0129 COG2907
Predicted flavin-containing amine oxidase [General function prediction only];
1-18 4.17e-04

Predicted flavin-containing amine oxidase [General function prediction only];


Pssm-ID: 442151 [Multi-domain]  Cd Length: 423  Bit Score: 42.80  E-value: 4.17e-04
                          10
                  ....*....|....*...
gi 1937910201   1 MAKKRIAVIGSGASGLTC 18
Cdd:COG2907     1 MARMRIAVIGSGISGLTA 18
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 3-41 9.51e-04

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 41.74  E-value: 9.51e-04
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1937910201   3 KKRIAVIGSGASGLTCIKCCLEEGLEPVCFEMSDDIGGL 41
Cdd:COG1232     1 MKRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVGGL 39
PRK07233 PRK07233
hypothetical protein; Provisional
 5-41 1.11e-03

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 41.41  E-value: 1.11e-03
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1937910201   5 RIAVIGSGASGLTCIKCCLEEGLEPVCFEMSDDIGGL 41
Cdd:PRK07233    1 KIAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGGL 37
PRK07208 PRK07208
hypothetical protein; Provisional
 1-47 2.67e-03

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 40.26  E-value: 2.67e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1937910201   1 MAKKRIAVIGSGASGLTCIKCCLEEGLEPVCFEMSDDIGGLWRYQEN 47
Cdd:PRK07208    2 TNKKSVVIIGAGPAGLTAAYELLKRGYPVTVLEADPVVGGISRTVTY 48
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
 3-44 4.73e-03

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 39.39  E-value: 4.73e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1937910201   3 KKRIAVIGSGASGLTCIKCCLEEGLEPVCFEMSDDIGGLWRY 44
Cdd:PRK11749  140 GKKVAVIGAGPAGLTAAHRLARKGYDVTIFEARDKAGGLLRY 181
PRK12769 PRK12769
putative oxidoreductase Fe-S binding subunit; Reviewed
 4-41 6.11e-03

putative oxidoreductase Fe-S binding subunit; Reviewed


Pssm-ID: 183733 [Multi-domain]  Cd Length: 654  Bit Score: 39.34  E-value: 6.11e-03
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1937910201   4 KRIAVIGSGASGLTCIKCCLEEGLEPVCFEMSDDIGGL 41
Cdd:PRK12769  328 KRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGL 365
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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