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Conserved domains on  [gi|282396069|ref|NP_666383|]
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olfactory receptor 1511 [Mus musculus]

Protein Classification

G protein-coupled receptor family protein; olfactory receptor subfamily 2A protein( domain architecture ID 11610385)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters| olfactory receptor (OR) subfamily 2A protein, such as human olfactory receptor 2A2 and related proteins in other mammals and sauropsids; ORs play a central role in olfaction, the sense of smell, and belong to the class A rhodopsin-like family of seven-transmembrane G protein-coupled receptors (7TM GPCRs)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
29-304 3.06e-158

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


:

Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 443.04  E-value: 3.06e-158
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNF-TPASKVIAFGGCAAQLY 107
Cdd:cd15916    1 SLLFLIFLIIYLLTVLGNLLILLTVWVDSHLH-RPMYIFLGHLSFLDMWLSTVTVPKMLAGFlEPGGKVISFGGCVAQLY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 108 FFHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIP 187
Cdd:cd15916   80 FFHFLGSTECFLYTLMAYDRYLAICHPLHYPTIMTGRLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGPNRIDYFFCDIP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 188 AVLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRA 267
Cdd:cd15916  160 PLLKLACADTTINELVIFASIGVVALGCFILILLSYGNIVRAILRIRTAEGRRRAFSTCASHLIVVLCFYVPCVFIYLRP 239
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 282396069 268 GSKSPFDGAVAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15916  240 GSKEALDGVIAVFYTVVTPLLNPLIYTLRNKEVKTAL 276
 
Name Accession Description Interval E-value
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
29-304 3.06e-158

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 443.04  E-value: 3.06e-158
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNF-TPASKVIAFGGCAAQLY 107
Cdd:cd15916    1 SLLFLIFLIIYLLTVLGNLLILLTVWVDSHLH-RPMYIFLGHLSFLDMWLSTVTVPKMLAGFlEPGGKVISFGGCVAQLY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 108 FFHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIP 187
Cdd:cd15916   80 FFHFLGSTECFLYTLMAYDRYLAICHPLHYPTIMTGRLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGPNRIDYFFCDIP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 188 AVLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRA 267
Cdd:cd15916  160 PLLKLACADTTINELVIFASIGVVALGCFILILLSYGNIVRAILRIRTAEGRRRAFSTCASHLIVVLCFYVPCVFIYLRP 239
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 282396069 268 GSKSPFDGAVAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15916  240 GSKEALDGVIAVFYTVVTPLLNPLIYTLRNKEVKTAL 276
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
35-307 1.08e-42

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 148.42  E-value: 1.08e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069   35 FFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHFLGS 114
Cdd:pfam13853   1 FCLMYLIIFLGNGTILFVIKTESSLH-QPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  115 TQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVLRLAC 194
Cdd:pfam13853  80 MESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSC 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  195 ADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYL--RAGSKSP 272
Cdd:pfam13853 160 ADIKVNNIYGLFVVTSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMvhRFGHNVP 239
                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 282396069  273 --FDGAVAVFYTVVTPLLNPLIYTLRNQEVKSALKRL 307
Cdd:pfam13853 240 plLQIMMANAYLFFPPVLNPIVYSVKTKQIRDCVKRM 276
 
Name Accession Description Interval E-value
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
29-304 3.06e-158

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 443.04  E-value: 3.06e-158
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNF-TPASKVIAFGGCAAQLY 107
Cdd:cd15916    1 SLLFLIFLIIYLLTVLGNLLILLTVWVDSHLH-RPMYIFLGHLSFLDMWLSTVTVPKMLAGFlEPGGKVISFGGCVAQLY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 108 FFHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIP 187
Cdd:cd15916   80 FFHFLGSTECFLYTLMAYDRYLAICHPLHYPTIMTGRLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGPNRIDYFFCDIP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 188 AVLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRA 267
Cdd:cd15916  160 PLLKLACADTTINELVIFASIGVVALGCFILILLSYGNIVRAILRIRTAEGRRRAFSTCASHLIVVLCFYVPCVFIYLRP 239
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 282396069 268 GSKSPFDGAVAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15916  240 GSKEALDGVIAVFYTVVTPLLNPLIYTLRNKEVKTAL 276
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
29-297 4.62e-142

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 401.48  E-value: 4.62e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYF 108
Cdd:cd13954    1 ILLFVLFLLIYLLTLLGNLLIILLVRLDSRLH-TPMYFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 109 FHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPA 188
Cdd:cd13954   80 FFSLGGTECFLLAVMAYDRYVAICHPLHYPTIMNKRVCILLAAGSWLIGFLNSLIHTVLISQLPFCGSNVINHFFCDIPP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 189 VLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAG 268
Cdd:cd13954  160 LLKLSCSDTSLNELVIFILAGFVGLGSFLLTLVSYIYIISTILKIPSAEGRQKAFSTCASHLTVVSLFYGTIIFMYVRPS 239
                        250       260       270
                 ....*....|....*....|....*....|.
gi 282396069 269 SKSPF--DGAVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd13954  240 SSYSSdlDKVVSVFYTVVTPMLNPIIYSLRN 270
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
30-304 1.25e-133

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 380.65  E-value: 1.25e-133
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15225    2 LLFVVFLLIYLVTLLGNLLIILITKVDPALHT-PMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15225   81 LFLGGTECFLLAAMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSNEINHFFCDIPPV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGS 269
Cdd:cd15225  161 LKLACADTSLNEIAIFVASVLVILVPFLLILVSYIFIISTILKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRPKS 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 282396069 270 KSPF--DGAVAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15225  241 SYSPetDKLLSLFYTVVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
31-304 9.19e-129

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 368.30  E-value: 9.19e-129
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15942    3 LFLFFLVVYLLTLSGNSLIILVVISDLQLH-KPMYWFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVTQLFFFH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVL 190
Cdd:cd15942   82 FLGCAECFLYTVMAYDRFLAICKPLHYSTIMNHRACLCLSLGTWLGGCLHSTFQTSLTFRLPYGQKNEVDYIFCDIPAML 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 191 RLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGSK 270
Cdd:cd15942  162 KLACADTAFNELVTFIDIGLVAMTCFLLILMSYVYIVSAILKIPSAEGQRRAFSTCTAHLTVVVIYYVPLTFIYLRPGSQ 241
                        250       260       270
                 ....*....|....*....|....*....|....
gi 282396069 271 SPFDGAVAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15942  242 DPLDGVVAVFYTTVTPLLNPVIYTLRNKEMKDAL 275
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
30-304 8.68e-126

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 360.70  E-value: 8.68e-126
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHARPMYILLGVLSFLDMWLSSVIVPRIILNF-TPASKVIAFGGCAAQLYF 108
Cdd:cd15941    2 LFFLLFLLIYLLTVLGNLLILLTIGSDPHLHGLPMYHFLGHLSFLDACLSSVTVPKVLAGLlTLSGRTISFEGCVVQLYA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 109 FHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPA 188
Cdd:cd15941   82 FHFLASTECFLYTVMAYDRYLAICHPLHYPTAMNRRMCAGLAGGTWATGATHAAIHTSLTFRLPYCGPCQIAYFFCDIPP 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 189 VLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAG 268
Cdd:cd15941  162 VLKLACADTTINELVILANIGIVAAGCFLLIVISYIYIVAAVLRIRTAEGRQRAFSTCSAHLTGVLLYYVPSVFIYLQPS 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 282396069 269 SKSPFDGAVAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15941  242 SSQAGAGAPAVFYTIVTPMLNPFIYTLRNKEVKRAL 277
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
29-297 2.15e-123

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 354.51  E-value: 2.15e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYF 108
Cdd:cd15230    1 VPLFVLFLLIYLITLVGNLGMIVLIRIDSRLHT-PMYFFLSNLSFVDICYSSVITPKMLVNFLSEKKTISFAGCAAQFFF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 109 FHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPA 188
Cdd:cd15230   80 FAVFGTTECFLLAAMAYDRYVAICNPLLYTVIMSKRVCIQLVAGSYLCGFVNSIVHTSSTFSLSFCGSNVINHFFCDIPP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 189 VLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAG 268
Cdd:cd15230  160 LLKLSCSDTHINELVLFAFSGFIGLSTLLIILISYLYILITILRIRSAEGRRKAFSTCASHLTAVSLFYGTLIFMYLRPS 239
                        250       260       270
                 ....*....|....*....|....*....|.
gi 282396069 269 SKSPFDG--AVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15230  240 SSYSLDQdkVVSVFYTVVIPMLNPLIYSLRN 270
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
31-304 2.28e-123

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 354.43  E-value: 2.28e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15228    3 LFVLFLAFYLCTLLGNLLILSAILSDPRLHT-PMYFFLCNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFFYH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVL 190
Cdd:cd15228   82 FLGSTECLLYTVMAYDRYVAICHPLRYLLIMNRRVCALLAAGTWITSSFHATILTSLTFTLPYCGSNVVDYFFCDIFPVL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 191 RLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGSK 270
Cdd:cd15228  162 KLACADTSIAETVSFTNVGLVPLTCFLLILASYVRIVISILKMRSAEGRRKAFSTCSSHLTVVTLFFGPCALIYTQPTPS 241
                        250       260       270
                 ....*....|....*....|....*....|....
gi 282396069 271 SPFDGAVAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15228  242 PVLVTPVQIFNNVVTPMLNPLIYTLRNKEVKAAL 275
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
29-304 4.89e-117

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 338.37  E-value: 4.89e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYF 108
Cdd:cd15421    1 LFLFSLILLIFLVALTGNALLILLIWLDSRLHT-PMYFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGTQIFF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 109 FHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPA 188
Cdd:cd15421   80 FLTLGGAECLLLALMAYDRYVAICHPLRYPVLMSPRVCLLMAAGSWLGGSLNSLIHTVYTMHFPYCGSREIHHFFCEVPA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 189 VLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAG 268
Cdd:cd15421  160 LLKLSCADTSAYETVVYVSGVLFLLIPFSLILASYALILLTVLRMRSAEGRKKALATCSSHLTVVSLYYGPAIFTYMRPG 239
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 282396069 269 S-KSP-FDGAVAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15421  240 SyHSPeQDKVVSVFYTILTPMLNPLIYSLRNKEVLGAL 277
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
15-307 1.33e-116

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 338.18  E-value: 1.33e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  15 DFLLLGLAHPPNLRAFLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPAS 94
Cdd:cd15943    1 EFILLGLTDNPELQVILFAVFLVIYLITLVGNLGMIVLIRLDSRLHT-PMYFFLSHLSFLDLCYSSAITPKMLVNFLAEN 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  95 KVIAFGGCAAQLYFFHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYC 174
Cdd:cd15943   80 KTISFTGCAAQMYFFVAFATTECFLLAVMAYDRYVAICNPLLYTVIMSPRVCIQLVAGSYLIGFVNALIQTICTFRLPFC 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 175 GPKEVDYFFCDIPAVLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVT 254
Cdd:cd15943  160 GSNVINHFFCDVPPLLKLSCSDTHVNEIVLFAFAIFLGIFTSLEILVSYVYILSAILRIHSSEGRRKAFSTCASHLMAVT 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 282396069 255 VYYVPCIFIYLRAGSKSPF--DGAVAVFYTVVTPLLNPLIYTLRNQEVKSALKRL 307
Cdd:cd15943  240 IFYGTTLFMYLRPSSSYSLdqDKVVSVFYTVVIPMLNPLIYSLRNKEVKDALRRI 294
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
30-297 2.07e-115

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 334.24  E-value: 2.07e-115
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15237    2 LLFILFLLIYLLTLLGNGLIILLIWLDSRLHT-PMYFFLSNLSLLDICYTTSTVPQMLVHLLSEHKTISFVGCAAQMFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15237   81 LALGVTECVLLAVMAYDRYVAICNPLRYSVIMSRRVCVRLAATSWASGFLNSLVLTSLTLRLPFCGPNHINHFFCEAPAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGS 269
Cdd:cd15237  161 LKLACADTSLNEAVIFVTSVLVLLIPFSLILASYIRILATILRIQSAEGRKKAFSTCASHLTVVTLFYGTAIFMYMRPHS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 282396069 270 KSPFDG--AVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15237  241 THSPDQdkMISVFYTIVTPMLNPLIYSLRN 270
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
30-297 1.62e-114

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 331.76  E-value: 1.62e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15911    2 LLFLLFLVIYIVTMAGNILIIVLVVADRHLH-TPMYFFLGNLSCLEICYTSTILPRMLASLLTGDRTISVSGCIVQFYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15911   81 GSLAATECYLLAVMSYDRYLAICKPLHYASLMNGRLCLQLAAGSWISGFLASTITVILMSQLTFCGPNEIDHFFCDFAPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYL--RA 267
Cdd:cd15911  161 LKLSCSDTSLVELVTFILSSIVTLPPFLLTLTSYICIISTILRIPSTTGRQKAFSTCSSHLIVVTIFYGTLIIVYVvpST 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 282396069 268 GSKSPFDGAVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15911  241 NTSRDLNKVFSLFYTVLTPLVNPLIYSLRN 270
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
30-297 1.50e-112

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 326.75  E-value: 1.50e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15912    2 LLFLLLLLTYLLTLLGNLLIITITLVDHRLHT-PMYFFLRNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSFFY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15912   81 FFLGTTEFFLLAVMSFDRYVAICNPLHYPTIMNSRVCLQLVLGSWVGGFLLILPPTILVFQLPFCGPNVINHFFCDSGPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLR--A 267
Cdd:cd15912  161 LKLSCSDTRLIELLDFILASVVLLGSLLLTIVSYIYIISTILRIPSASGRQKAFSTCASHLTVVSIFYGSCIFMYVRpsQ 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 282396069 268 GSKSPFDGAVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15912  241 SSSLDLNKVVALLNTVVTPLLNPFIYTLRN 270
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
16-301 1.75e-112

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 327.36  E-value: 1.75e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  16 FLLLGLAHPPNLRAFLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASK 95
Cdd:cd15408    1 FILLGFTDQPELQVLLFVVFLLIYVITLVGNLGMILLIRLDSRLHT-PMYFFLSHLSFLDICYSSTITPKTLLNLLAERK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  96 VIAFGGCAAQLYFFHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCG 175
Cdd:cd15408   80 VISFTGCLTQLYFYAVFATTECYLLAAMAYDRYVAICNPLLYTVIMSQRVCVSLVAGSYLAGFLNSTVHTGFILRLSFCG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 176 PKEVDYFFCDIPAVLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTV 255
Cdd:cd15408  160 SNVINHFFCDGPPLLALSCSDTSLNEMLLFAFVGFNVLTTTLVILISYTYILATILRMRSAEGRHKAFSTCASHLTAVTL 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 282396069 256 YYVPCIFIYLRAGSKSPFDG--AVAVFYTVVTPLLNPLIYTLRNQEVK 301
Cdd:cd15408  240 FYGSLAFMYLRPSSRYSLDLdkVASVFYTVVIPMLNPLIYSLRNKEVK 287
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
29-306 6.42e-112

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 325.80  E-value: 6.42e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYF 108
Cdd:cd15419    1 VLLFLLFLVIYMVTVLGNIGMIIIISTDSRLHT-PMYFFLMNLSFLDLCYSSVIAPKALANFLSESKTISYNGCAAQFFF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 109 FHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPA 188
Cdd:cd15419   80 FSLFGTTEGFLLAAMAYDRFIAICNPLLYPVIMSRRVCVQLVAGSYLCGCINSIIQTSFTFSLSFCGSNEIDHFFCDVPP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 189 VLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAG 268
Cdd:cd15419  160 LLKLSCSDTFINELVMFVLCGLIIVSTILVILVSYAYILSTILRIPSAEGRKKAFSTCASHLTAVSLFYGTVFFMYAQPG 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 282396069 269 SKS-PFDG-AVAVFYTVVTPLLNPLIYTLRNQEVKSALKR 306
Cdd:cd15419  240 AVSsPEQSkVVSVFYTLVIPMLNPLIYSLRNKDVKEALKR 279
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
30-304 3.91e-111

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 323.45  E-value: 3.91e-111
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15231    2 LLFLIFLIIYLVTLLGNLLIITLVLLDSHLHT-PMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15231   81 VSFVGTECLLLAVMAYDRYVAICNPLHYAVIMSRKVCLQLAAASWLCGFLNSAVHTVLTFRLSFCGSNQISHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVdIGV-VAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAG 268
Cdd:cd15231  161 LKLSCSDTSLNEVLLLV-ASVfIGLTPFLFIVISYVYIISTILKIRSAEGRRKAFSTCASHLTVVTLFYGTAIFNYNRPS 239
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 282396069 269 SKSPFDGA--VAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15231  240 SGYSLDKDtlISVLYSIVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
29-306 1.17e-110

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 322.43  E-value: 1.17e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYF 108
Cdd:cd15409    1 VPLFLVFLAIYLITLVGNLGLIALIWKDSHLHT-PMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 109 FHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPA 188
Cdd:cd15409   80 FGFSATTECFLLAAMAYDRYVAICNPLLYPVVMSNRLCVQLITASYIGGFLHSMIHVGLTFRLSFCGSNEINHFFCDIPP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 189 VLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAG 268
Cdd:cd15409  160 LLKISCTDPSINELVLFIFSGSIQVFTILTVLISYSYILFTILKMKSAEGRRKAFSTCGSHLLSVSLFYGSLFFMYVRPS 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 282396069 269 SKSPFDGA--VAVFYTVVTPLLNPLIYTLRNQEVKSALKR 306
Cdd:cd15409  240 SLYALDQDmmDSLFYTIVIPLLNPFIYSLRNKEVIDALRK 279
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
16-307 2.68e-110

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 321.92  E-value: 2.68e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  16 FLLLGLAHPPNLRAFLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASK 95
Cdd:cd15410    1 FILLGFTDYPELQVPLFLVFLAIYGITLLGNLGMIVLIKIDPKLHT-PMYFFLSHLSFVDFCYSSVIAPKMLVNFLAEDK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  96 VIAFGGCAAQLYFFHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCG 175
Cdd:cd15410   80 AISYSGCMLQFFFFCTFVVTESFLLAVMAYDRYVAICNPLLYTVIMSRKLCVLLVAGSYLWGIVCSLIHTCGLLRLSFCG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 176 PKEVDYFFCDIPAVLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTV 255
Cdd:cd15410  160 SNVINHFFCDLPPLLSLSCSDTYLNELLLFIFGSLNEASTLLIILTSYVFIIVTILRIRSAEGRQKAFSTCASHLTAITI 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 282396069 256 YYVPCIFIYLRAGSKSPF--DGAVAVFYTVVTPLLNPLIYTLRNQEVKSALKRL 307
Cdd:cd15410  240 FHGTILFMYCRPSSSYSLdtDKVASVFYTVVIPMLNPLIYSLRNKDVKDALRKL 293
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
32-297 5.59e-110

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 320.17  E-value: 5.59e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  32 FLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHF 111
Cdd:cd15227    4 FVLFLLIYLAALTGNLLIITVVTLDHHLHT-PMYFFLKNLSFLDLCYISVTVPKSIANSLTNTRSISFLGCVAQVFLFIF 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 112 LGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVLR 191
Cdd:cd15227   83 FAASELALLTVMAYDRYVAICHPLHYEVIMNRGACVQMAAASWLSGLLYGALHTANTFSLPFCGSNVIHQFFCDIPQLLK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 192 LACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGSKS 271
Cdd:cd15227  163 LSCSDTYLNEIGVLVLSVCLGLGCFVFIIVSYVHIFSTVLRIPSAQGRSKAFSTCLPHLIVVSLFLSTGSFAYLKPPSDS 242
                        250       260
                 ....*....|....*....|....*...
gi 282396069 272 P--FDGAVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15227  243 PslLDLLLSVFYSVVPPTLNPIIYSLRN 270
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
29-304 6.57e-110

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 320.31  E-value: 6.57e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYF 108
Cdd:cd15229    1 IFLFLVFLVIYLLTLLGNLLIMLVIRADSHLHT-PMYFFLSHLSFLDICYSSVTVPKMLENLLSERKTISVEGCIAQIFF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 109 FHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPA 188
Cdd:cd15229   80 FFFFAGTEAFLLSAMAYDRYAAICHPLHYVQIMSKQVCVQLVGGAWALGFLYALINTLLLLNLHFCGPNEINHFSCELPS 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 189 VLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLR-- 266
Cdd:cd15229  160 LLPLSCSDTFANKMVLLTSSVIFGLGSFLLTLVSYIHIISTILRIRSAEGRSKAFSTCSSHLTVVGLFYGTGFFRYLRpn 239
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 282396069 267 AGSKSPFDGAVAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15229  240 SASSSVLDRVFSIQYSILTPMLNPIIYSLKNKEVKAAL 277
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
30-297 1.03e-109

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 319.53  E-value: 1.03e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15226    2 FLFVFFSLFYVATVLGNLLIVVTVTSDPHLHS-PMYFLLANLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15226   81 HFFGGSEMVLLIAMAFDRYVAICKPLHYLTIMSPRMCILLVVASWIIGFIHSLSQLAFVVNLPFCGPNVVDSFFCDLPLV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKiRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGS 269
Cdd:cd15226  161 IKLACTDTYVLELMVVANSGLISLVCFLLLLISYIVILVTVRK-HSSGGSSKALSTCSAHITVVVLFFGPCIFIYVWPFS 239
                        250       260
                 ....*....|....*....|....*...
gi 282396069 270 KSPFDGAVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15226  240 TFPVDKFLAVFYTVITPLLNPIIYTLRN 267
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
30-306 1.67e-109

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 319.59  E-value: 1.67e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15417    2 ILFVLFLGIYLVTLLWNLGLIILIRMDSHLHT-PMYFFLSNLSFVDICYSSSITPKMLSDFFREQKTISFVGCATQYFVF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15417   81 SGMGLTECFLLAAMAYDRYVAICNPLLYSVIMSPRLCVQLVAGAYLGGFLNSLIQTVSMFQLSFCGPNVIDHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGS 269
Cdd:cd15417  161 LSLSCSDTFISQVVLFLVAVLFGVFSVLVVLISYGYIISTILKIRSAKGRSKAFNTCASHLTAVTLFYGTGLFVYLRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 282396069 270 K--SPFDGAVAVFYTVVTPLLNPLIYTLRNQEVKSALKR 306
Cdd:cd15417  241 ShsQDQDKVASVFYTVVIPMLNPLIYSLRNKEIKDALKR 279
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
30-304 8.96e-108

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 314.93  E-value: 8.96e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15235    3 LLFLLFLAMYLLTLLGNLLIVLLIRSDPRLHT-PMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMYFF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15235   82 IAFGNTDSFLLAVMAYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSFCGSNEIPHFFCDLQPL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGS 269
Cdd:cd15235  162 LKLSCSDTSLNELLIFTEGAVVVLGPFLLIVLSYARILAAVLKVPSAAGRRKAFSTCGSHLTVVALFYGTIIGVYFQPSS 241
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 282396069 270 K--SPFDGAVAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15235  242 SysADKDRVATVMYTVVTPMLNPFIYSLRNKDVKGAL 278
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
31-306 2.19e-107

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 314.26  E-value: 2.19e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15411    3 LFVLFLVIYVITVMGNLGMILLIRADSQLHT-PMYFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFFI 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVL 190
Cdd:cd15411   82 ALATTECFLLGLMAYDRYVAICNPLLYTVVMSRRVCLKLAAGSYAAGFLNSLIHTTLISRLSFCGSNVINHFFCDTPPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 191 RLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGSK 270
Cdd:cd15411  162 KLSCSDTHVNEMLIFILAGLTLVGSLLIILVSYTYILSTILKIRSAEGRRKAFSTCASHLTAVTIFYGTGIFTYLRPSSS 241
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 282396069 271 SPFDGA--VAVFYTVVTPLLNPLIYTLRNQEVKSALKR 306
Cdd:cd15411  242 YSLGQDkvASVFYTVVIPMLNPLIYSLRNKEVKNALRR 279
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
31-297 1.95e-106

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 311.48  E-value: 1.95e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15947    3 LFVVVLIFYLLTLLGNTAIILLSLLDPRLHT-PMYFFLSNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLYIFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVL 190
Cdd:cd15947   82 WLGSTECVLLAVMAFDRYVAVCRPLHYTVIMHPRLCVQLAALSWLSGLANSLLQTTLTLQLPLCGHHTLDHFFCEVPALI 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 191 RLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGSK 270
Cdd:cd15947  162 KLACVDTTFNELELFVASVFFLLVPLSLILVSYGFIARAVLRIKSAEGRRKAFGTCSSHLLVVSLFYGTAIYMYLQPPSS 241
                        250       260
                 ....*....|....*....|....*....
gi 282396069 271 SPFDGA--VAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15947  242 YSQDQGkfISLFYTVVTPTLNPLIYTLRN 270
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
30-297 1.75e-105

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 308.76  E-value: 1.75e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15939    2 ICFVVFLLIYLATVLGNLLIVVTIKASQTLGS-PMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFAE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15939   81 HFFGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAiLKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGS 269
Cdd:cd15939  161 LKLACTDTYVIGLLVVANSGLICLLSFLILLISYIVILYS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVT 239
                        250       260
                 ....*....|....*....|....*...
gi 282396069 270 KSPFDGAVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15939  240 TFPIDKVVAVFYTIITPMLNPLIYTLRN 267
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
29-297 3.70e-104

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 305.69  E-value: 3.70e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYF 108
Cdd:cd15431    1 IILFVLLLIVYLVTLLGNGLIILLIRVDSQLHT-PMYFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYI 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 109 FHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQAtLTFRLPYCGPKEVDYFFCDIPA 188
Cdd:cd15431   80 SLFLGITECLLLAVMAYDRFVAICNPLRYTLIMSWRVCIQLAAGSWVSAFLLTVIPV-LTMPLHFCGPNVINHFFCEVQA 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 189 VLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAG 268
Cdd:cd15431  159 LLKLACSDTSLNEILMFATSIFTLLLPFSFILVSYIRIGVAVLRIRSAEGRRKAFSTCGSHLTVVTIFYGTAIFMYLRPQ 238
                        250       260       270
                 ....*....|....*....|....*....|.
gi 282396069 269 SKSPFDG--AVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15431  239 SKSSSDQdkIISVFYGVVTPMLNPLIYSLRN 269
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
30-304 3.74e-103

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 303.48  E-value: 3.74e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15420    2 LLFGLFSLLYIFTLLGNGLILGLIWLDSRLHT-PMYFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15420   81 LALAHTECVLLAVMSYDRYVAICHPLRYTVIMNWRVCTTLAATSWACGFLLALVHVVLLLRLPFCGPNEVNHFFCEILAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGS 269
Cdd:cd15420  161 LKLACADTWINEILIFAGCVFILLGPFSLILISYLHILAAILKIQSAEGRRKAFSTCSSHLCVVGLFYGTAMFMYMVPGS 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 282396069 270 KSPFDG--AVAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15420  241 SNSAEQekILSLFYSLFNPMLNPLIYSLRNKQVKGAL 277
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
30-297 4.70e-103

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 302.64  E-value: 4.70e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15232    2 LLFWLFLFLYAAALTGNSLIILAISTSPKLHT-PMYFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15232   81 TWSLGSELLLLTAMAYDRYVAICHPLHYSTIMRKEVCVGLATGVWAIGMLNSAVHTGLMLRLSFCGPNIINHFFCEIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGS 269
Cdd:cd15232  161 LLLSCSDTSLNEIMAFVADVFFGVGNFLLTLTSYGFIIRSILRIRSTEGKKKAFSTCSSHLIVVSLYYSTVIYTYIRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 282396069 270 KSPF--DGAVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15232  241 SYSPekDKVVAVLYSVVTPTLNPLIYSLRN 270
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
31-297 6.99e-103

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 302.28  E-value: 6.99e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15224    3 LFLLFLIAYVLTLLENLLIILTIWLNSQLH-KPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVL 190
Cdd:cd15224   82 SLACTECVLLAVMAYDRYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGPNVINHFFCDISPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 191 RLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGSK 270
Cdd:cd15224  162 NLSCTDMSLAELVDFILALIILLVPLLVTVASYICIISTVLRIPSATGRQKAFSTCASHLTVVIIFYSATLFMYARPKAI 241
                        250       260
                 ....*....|....*....|....*....
gi 282396069 271 SPFD--GAVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15224  242 SSFDsnKLVSVLYTVVTPLLNPIIYCLRN 270
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
30-297 1.34e-102

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 301.56  E-value: 1.34e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15936    2 FLFLVFLLVYLTTWLGNLLIIITVISDPHLHT-PMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15936   81 HFTGGAEVFLLSVMAYDRYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSIVQVALLLQLPFCGPNVLDNFYCDVPQV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIvhaILKIRT--ADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRA 267
Cdd:cd15936  161 IKLACTDTFLLELLMVSNSGLVTLLIFFILLISYTVI---LVKIRThvTEGKRKALSTCASQITVVTLIFVPCIYIYARP 237
                        250       260       270
                 ....*....|....*....|....*....|
gi 282396069 268 GSKSPFDGAVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15936  238 FQTFPMDKAVSVLYTVITPMLNPMIYTLRN 267
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
31-297 7.92e-102

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 299.74  E-value: 7.92e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15940    3 FFMLFLVLYLLTLSGNILIMITIVMDPRLHT-PMYFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFLH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVL 190
Cdd:cd15940   82 LFACTEIFLLTIMAYDRYVAICNPLHYPTVMNHKVCLWLVAALWLGGTVHSLAQTFLTIRLPYCGPNEIDSFFCDVPPVI 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 191 RLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKiRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGSK 270
Cdd:cd15940  162 KLACTDTYLIDILIVSNSGLISLVCFVALLGSYIVILVSLRK-RSTEGRRKALSTCASHLTVVTLFFGPCIFIYTRPSTS 240
                        250       260
                 ....*....|....*....|....*..
gi 282396069 271 SPFDGAVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15940  241 FSEDKVVSVFYTVVTPLLNPIIYTLRN 267
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
30-297 1.13e-101

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 299.14  E-value: 1.13e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15918    2 LLFGLFLGMYLVTVLGNLLIILAIGSDSHLHT-PMYFFLANLSLVDICFTSTTVPKMLVNIQTQSKSISYAGCLTQMYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15918   81 LLFGDLDNFLLAVMAYDRYVAICHPLHYTTIMSPRLCILLVAASWVITNLHSLLHTLLMARLSFCASNEIPHFFCDLNPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGS 269
Cdd:cd15918  161 LKLSCSDTHLNELVILVLGGLVGLVPFLCILVSYVRIVSAVLRIPSAGGKWKAFSTCGSHLSVVSLFYGTVIGVYLSPPS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 282396069 270 KSPFDG--AVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15918  241 SHSASKdsVAAVMYTVVTPMLNPFIYSLRN 270
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
30-297 2.44e-101

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 298.45  E-value: 2.44e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15915    2 FLFVLFLLLYLASLLGNGAILAVVIAEPRLH-SPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15915   81 HFLGSSEAMLLAVMAYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALMHTVMTSRLPFCGPNKINHFFCDIKPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIV-HAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAG 268
Cdd:cd15915  161 LKLACGDTSLNLWLLNIVTGSIALGTFILTLLSYIYIIsFLLLKVRSKEGRHKAFSTCASHLTVVLLLYGPALFTYIRPS 240
                        250       260       270
                 ....*....|....*....|....*....|.
gi 282396069 269 SKSPF--DGAVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15915  241 SGDSLeqDRIVALLYTVVTPVLNPLIYTLRN 271
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
31-304 1.08e-99

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 294.69  E-value: 1.08e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15429    3 LFVLFLVMYLLTLLGNFLIILLIRLDPRLHT-PMYFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVAQLFISL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVL 190
Cdd:cd15429   82 ALGGTEFILLAVMAYDRYVAVCHPLRYTVIMSGGLCIQLAAASWTSGFLNSLVQTAFTFRLPFCGHNTINHFSCELLAVV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 191 RLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLR--AG 268
Cdd:cd15429  162 RLACVDTSLNEVAILVSSVVVLLTPCFLVLLSYIHIISAILRIRSSEGRHKAFSTCASHLTVVSLCYGTAIFTYMRprSG 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 282396069 269 SKSPFDGAVAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15429  242 SSALQEKMISLFYAVVTPMLNPLIYSLRNKEVKGAL 277
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
30-306 4.32e-98

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 290.87  E-value: 4.32e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15414    2 PLFLLFLLVYLITLLGNLGMIILIQVDSRLHT-PMYFFLSHLSFVDLCYSSVVTPKMLSDFFVEKKAISFLGCAAQMWFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15414   81 GLFVAAECFLLASMAYDRYVAICNPLLYTVIMSQRVCVQLVVGPYVVGLLNTTTHTTAAFFLPFCGPNVINHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGS 269
Cdd:cd15414  161 LSLSCADTQINKWVLFIMAGALGVLSGLIILVSYIYILIAILRIRSAEGRRKAFSTCSSHLTAVSILYGTLFFIYVRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 282396069 270 KSPF--DGAVAVFYTVVTPLLNPLIYTLRNQEVKSALKR 306
Cdd:cd15414  241 SSSLdlDKVVSVFYTAVIPMLNPLIYSLRNKEVKDALRR 279
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
16-306 1.02e-97

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 290.11  E-value: 1.02e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  16 FLLLGLAHPPNLRAFLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASK 95
Cdd:cd15945    1 FILLGFTDYLSLKVTLFLVFLLVYLLTLVGNVGMIILIRMDSQLHT-PMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  96 VIAFGGCAAQLYFFHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCG 175
Cdd:cd15945   80 SIPFYGCALQMFFFAAFADAECLLLAVMAYDRYVAICNPLLYTTAMSRRVCYLLLVGAYLSGMATSLVHTTLTFRLSFCG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 176 PKEVDYFFCDIPAVLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTV 255
Cdd:cd15945  160 SNTINHFFCDIPPLLALSCSDTQINELLLFALCGFIQTSTFLAIIISYCYIIITVLKIRSAEGRFKAFSTCASHLTAVGL 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 282396069 256 YYVPCIFIYLR-AGSKSP-FDGAVAVFYTVVTPLLNPLIYTLRNQEVKSALKR 306
Cdd:cd15945  240 FYGTLLFMYLRpSSSYSLdTDKMTSVFYTLVIPMLNPLIYSLRNKDVKEALKK 292
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
29-306 2.79e-96

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 285.85  E-value: 2.79e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYF 108
Cdd:cd15415    1 VPLFMLFLLIYFITLLGNLGMIVLIRINPQLHT-PMYFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYSACIAQHFF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 109 FHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPA 188
Cdd:cd15415   80 FAVFVTTEGFLLAVMAYDRYVAICNPLLYTVAMTKRVCVQLVAGSYLGGLINSLTHTIGLLKLSFCGPNVINHYFCDIPP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 189 VLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAG 268
Cdd:cd15415  160 LLKLSCSDTHINELLLLTFSGVIAMSTLLTIIISYIFILFAILRIRSAEGRRKAFSTCASHLTAVTLFYGSVSFSYIQPS 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 282396069 269 SKSPFD--GAVAVFYTVVTPLLNPLIYTLRNQEVKSALKR 306
Cdd:cd15415  240 SQYSLEqeKVSAVFYTLVIPMLNPLIYSLRNKDVKDALKR 279
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
29-297 3.42e-96

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 285.23  E-value: 3.42e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYF 108
Cdd:cd15938    1 ALLFALFLLAYTMVLVGNLLIMVTVRSDPKLSS-PMYFLLGNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 109 FHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPA 188
Cdd:cd15938   80 LHFVGAAEMFLLTVMAYDRYVAICKPLHYTTIMSRRLCWVLVAASWAGGFLHSIVQTLLTIQLPFCGPNQVNNFFCDVPP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 189 VLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIvhaILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAG 268
Cdd:cd15938  160 VIKLACTDTCVTELLMVSNSGLISTVCFVVLVTSYTTI---LVTIRSTEGRRKALSTCASHLMVVTLFFGPCIFIYARPF 236
                        250       260
                 ....*....|....*....|....*....
gi 282396069 269 SKSPFDGAVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15938  237 STFPVDKHVSVLYNVITPMLNPLIYTLRN 265
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
31-304 7.24e-95

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 282.44  E-value: 7.24e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15432    3 LFVVFLIFYILTLLGNLAIILVSRLDPQLHT-PMYFFLSNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFIFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVL 190
Cdd:cd15432   82 GLGSTECVLLAVMAFDRFAAICQPLHYSVIMHQRLCQQLAAGAWISGFANSLVQSTLTLKMPRCGRRRVDHFFCEVPALL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 191 RLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGSK 270
Cdd:cd15432  162 KLSCVDTTANEAELFVISVLLLLIPLGLILISYIFIVRAVLRIRSAEGRRKAFNTCGSHLLVVSLFYGTAISMYLQPPSN 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 282396069 271 SPFDGA--VAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15432  242 SSHDRGkmVALFYGIITPMLNPLIYTLRNKDVKEAL 277
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
31-306 3.48e-94

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 280.41  E-value: 3.48e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15416    3 LFVLFLVIYSVTLLGNLSIILLIRISSQLHT-PMYFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSAA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVL 190
Cdd:cd15416   82 TFGTVECFLLAAMAYDRYVAICNPLLYSTIMSQKVCVLLVAASYLGGCLNALVFTTCVFSLSFCGPNEINHFFCDFPPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 191 RLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGSK 270
Cdd:cd15416  162 KLSCSDIRLAKILPSISSGIIILVTVLTIIISYLYILIAILRIRSTEGRHKAFSTCASHLTAVTLFYGTITFIYVMPNSS 241
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 282396069 271 SPFDGA--VAVFYTVVTPLLNPLIYTLRNQEVKSALKR 306
Cdd:cd15416  242 YSMDQNkvVSVFYMVVIPMLNPLIYSLRNKEVKGALKR 279
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
30-297 9.67e-94

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 278.96  E-value: 9.67e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHARPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15935    2 LLFVLVLACYAAILLGNLLIVVTVHADPHLLQSPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15935   82 HFLGGSEMLLLTLMAYDRYVAICHPLRYLAVMNRQLCIKLLAACWAGGFLHSATQAALVLRLPFCGPNELDNFYCDVPQV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVhAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGS 269
Cdd:cd15935  162 IKLACMDTYVVEVLMVANSGLLSLVCFLVLLVSYGIIL-TTLRGRFREGGGKALSTCSSHLTVVSLIFVPCIFVYLRPFS 240
                        250       260
                 ....*....|....*....|....*...
gi 282396069 270 KSPFDGAVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15935  241 SSSVDKVASVFYTLITPALNPLIYTLRN 268
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
31-306 1.78e-93

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 278.90  E-value: 1.78e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15412    3 LFVLFLVIYLITLLGNLGMILLIRLDSRLHT-PMYFFLSHLSFVDLCYSSNVTPKMLVNFLSEKKTISFAGCFTQCYFFI 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVL 190
Cdd:cd15412   82 ALVITEYYMLAVMAYDRYMAICNPLLYSVKMSRRVCISLVTFPYIYGFLNGLIQTILTFRLSFCGSNVINHFYCADPPLI 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 191 RLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGSK 270
Cdd:cd15412  162 KLSCSDTYVKETAMFIVAGFNLSSSLLIILISYLFILIAILRIRSAEGRCKAFSTCGSHLTAVTIFYGTLFCMYLRPPSE 241
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 282396069 271 S--PFDGAVAVFYTVVTPLLNPLIYTLRNQEVKSALKR 306
Cdd:cd15412  242 EsvEQSKIVAVFYTFVSPMLNPLIYSLRNKDVKQALKK 279
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
20-307 1.84e-93

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 279.25  E-value: 1.84e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  20 GLAHPPNLRAFLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAF 99
Cdd:cd15406    1 GLTDQPELQLPLFLLFLGIYVVTVVGNLGMILLITLSSQLHT-PMYYFLSNLSFIDLCYSSVITPKMLVNFVSEKNIISY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 100 GGCAAQLYFFHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEV 179
Cdd:cd15406   80 PECMTQLFFFCVFAIAECYMLTAMAYDRYVAICNPLLYNVTMSPRVCSLLVAGVYIMGLIGATVHTSCMLRLSFCGDNVI 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 180 DYFFCDIPAVLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVP 259
Cdd:cd15406  160 NHYFCDILPLLKLSCSSTYINELLLFIVGGFNVLATTLAILISYAFILSSILRIRSAEGRSKAFSTCSSHLAAVGVFYGS 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 282396069 260 CIFIYLRAGSKSPFD-GAVA-VFYTVVTPLLNPLIYTLRNQEVKSALKRL 307
Cdd:cd15406  240 IIFMYLKPSSSSSMTqEKVSsVFYTTVIPMLNPLIYSLRNKDVKNALKKV 289
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
30-297 3.30e-93

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 277.72  E-value: 3.30e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15914    2 LLFILLLLIYLFIITGNLLIFTVVRLDTHLHT-PMYFFISILSFLEIWYTTVTIPKMLSNLLSEEKTISFNGCLLQMYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15914   81 HSLGITECYLLTAMAYDRYLAICNPLHYPSIMTPKLCTQLAAGCWLCGFLGPVPEIILISTLPFCGPNQIQHIFCDFPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLR-AG 268
Cdd:cd15914  161 LSLACTDTSLNVLVDFVIHAVIILLTFLLILLSYVKIISVVLKIPSAEGRQKAFSTCAAHLTVVLLFFGSVSFMYLRlSK 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 282396069 269 SKSPF-DGAVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15914  241 SYSLDyDRAIAVVYAVLTPFFNPIIYSLRN 270
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
31-304 4.13e-93

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 277.72  E-value: 4.13e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15434    3 LSVVVLIFYLLTLVGNTTIILVSCLDSRLHT-PMYFFLANLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLFIAL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVL 190
Cdd:cd15434   82 GLGGTECVLLAVMAYDRYAAVCQPLHYTVVMHPRLCWKLVAMSWLIGFGNSLVLSPLTLSLPRCGHHRVDHFFCEMPALI 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 191 RLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGSK 270
Cdd:cd15434  162 KLACVDTTAYEATIFALGVFILLFPLSLILVSYGYIARAVLKIKSAAGRKKAFGTCGSHLTVVSLFYGTIIYMYLQPKNS 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 282396069 271 SPFDGA--VAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15434  242 VSQDQGkfLTLFYTIVTPSLNPLIYTLRNKDVKGAL 277
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
28-307 4.51e-93

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 277.82  E-value: 4.51e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  28 RAFLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLY 107
Cdd:cd15418    1 QLILFVVFLLSYILTLVGNLTLIALICLDSRLHT-PMYFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 108 FFHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIP 187
Cdd:cd15418   80 FSAGLAYSECFLLAAMAYDRYVAICNPLLYSSAMSKKLCMGLVAASYLGGFANAIIHTSNTFRLHFCGDNIIDHFFCDLP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 188 AVLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRA 267
Cdd:cd15418  160 PLVKLACDDTRVYELILYFILGFNVIAPTALILASYTFILAAILRIHSASGRHKAFSTCSAHLTSVTLYYGSILFIYSRP 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 282396069 268 GSKSPFDG--AVAVFYTVVTPLLNPLIYTLRNQEVKSALKRL 307
Cdd:cd15418  240 SSSHTPDRdkVVALFYTVVNPLLNPLIYSLRNKDVKEALKKL 281
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
30-304 4.63e-92

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 275.22  E-value: 4.63e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15234    2 LLFGLFLSMYLVTVLGNLLIILAVSSDSHLHT-PMYFFLSNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTQMCFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15234   81 LLFGGLDNFLLAVMAYDRYVAICHPLHYTVIMNPCLCGLLVLLSLLISILDSLLHSLMVLQLSFCTDVEIPHFFCELAQV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYL-RAG 268
Cdd:cd15234  161 LKLACSDTLINNILIYLATVIFGGIPLSGIIFSYYKIVSSILRIPSSGGKYKAFSTCGSHLSVVSLFYGTGLGVYIsSAV 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 282396069 269 SKSPFDGAVA-VFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15234  241 THSSRKTAVAsVMYTVVTPMLNPFIYSLRNKDMKGAL 277
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
30-297 8.65e-92

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 274.25  E-value: 8.65e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15430    2 LLFVLCLIMYLVILLGNGVLIIITILDSHLHT-PMYFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMYLS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15430   81 LAMGSTECVLLAVMAYDRYVAICNPLRYPIIMNKRLCVQMAAGSWVTGFLNSLVETVLAMQLPFCGNNVINHFTCEILAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGS 269
Cdd:cd15430  161 LKLACVDISLNEIIMLVGNIIFLVIPLLLICISYIFILSTILRINSAEGRKKAFSTCSAHLTVVIIFYGTILFMYMKPKS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 282396069 270 K--SPFDGAVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15430  241 KnaQISDKLITLFYGVVTPMLNPIIYSLRN 270
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
30-297 3.99e-91

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 272.27  E-value: 3.99e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15913    2 LLFSFFSVIYILTLLGNGAIICAVWWDRRLHT-PMYILLGNFSFLEICYVTSTVPNMLVNFLSETKTISFSGCFLQFYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15913   81 FSLGTTECFFLSVMAFDRYLAICRPLHYPTIMTGQLCGKLVAFCWVCGFLWFLIPVVLISQLPFCGPNIIDHFLCDPGPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGS 269
Cdd:cd15913  161 LALSCVPAPGTELICYTLSSLIIFGTFLFILGSYTLVLRAVLRVPSAAGRHKAFSTCGSHLAVVSLFYGSVMVMYVSPGS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 282396069 270 KSPFDGA--VAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15913  241 GNSTGMQkiVTLFYSVVTPLLNPLIYSLRN 270
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
31-297 4.74e-91

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 272.43  E-value: 4.74e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15946    3 LFAVFLLIYLSILLGNGLIITLICLDSRLHT-PMYFFLSVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYIFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVL 190
Cdd:cd15946   82 ALGITECTLFSVMAYDRYVAICHPLRYKVIMSWGLCILMVAGSWVCGVFSSLLHTFFTMRLPYCGPNEINHYFCEVPAVL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 191 RLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGSK 270
Cdd:cd15946  162 KLACADTSLNEMVDFVLGVIVLVVPLSLILASYVNIFKAILKIRSTQGRCKAFSTCASHITVVTMFYGPAMFMYMRPGSN 241
                        250       260
                 ....*....|....*....|....*....
gi 282396069 271 SP--FDGAVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15946  242 YSpeRDKKISLFYNVFTALLNPVIYSLRN 270
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
16-307 4.87e-90

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 270.50  E-value: 4.87e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  16 FLLLGLAHPPNLRAFLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASK 95
Cdd:cd15944    1 FILLGFTQDPQMQIILFVVFLIIYLVNVVGNLGMIILITTDSQLHT-PMYFFLCNLSFCDLGYSSAIAPRMLADFLTKHK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  96 VIAFGGCAAQLYFFHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCG 175
Cdd:cd15944   80 VISFSGCATQFAFFVGFVDAECYVLAAMAYDRYVAICNPLLYSTLMSKRVCLQLMAGSYLAGLVNLVIHTTATFSLSFCG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 176 PKEVDYFFCDIPAVLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTV 255
Cdd:cd15944  160 SNIINHFFCDVPPLLALSCSDTHINEILLYVFCGFVEMSSLSIILISYLFILVAILRMRSAEGRRKAFSTCASHFTGVTL 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 282396069 256 YYVPCIFIYLRAGSKSPF--DGAVAVFYTVVTPLLNPLIYTLRNQEVKSALKRL 307
Cdd:cd15944  240 FYGTVIFMYLRPTSVYSLdqDKWASVFYTVVIPMLNPLIYSLRNKDVKEAFKKL 293
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
31-306 1.22e-89

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 268.90  E-value: 1.22e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15407    3 LFIIFTLIYLITLVGNLGMILLILLDSRLHT-PMYFFLSNLSLVDIGYSSAVTPKVMAGLLTGDKVISYNACAAQMFFFV 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVL 190
Cdd:cd15407   82 VFATVENFLLASMAYDRHAAVCKPLHYTTTMTTKVCACLTIGCYVCGFLNASIHTGNTFRLSFCKSNVINHFFCDIPPVL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 191 RLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGSK 270
Cdd:cd15407  162 ALSCSDIHISEIVLFFLASFNVFFALLVILISYLFIFITILRMRSAEGHQKAFSTCASHLTAVSIFYGTVIFMYLQPSSS 241
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 282396069 271 SPF--DGAVAVFYTVVTPLLNPLIYTLRNQEVKSALKR 306
Cdd:cd15407  242 HSMdtDKMASVFYTMVIPMLNPLVYSLRNKEVKSAFKK 279
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
31-304 1.31e-89

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 268.91  E-value: 1.31e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15424    3 LFVVILIIYLLTILGNLVIIILVQTDSRLH-TPMYFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIAL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVL 190
Cdd:cd15424   82 SLGSTECLLLGAMAYDRYLAICHPLLYAAAMGRWRQLQLALSCWAIGFLLSVINVGCTLRHPFCGPNHINHFFCELPVVL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 191 RLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGSK 270
Cdd:cd15424  162 KLACADTHITEAIVFGAGVLILLVPLSVILTSYGLILASVLQMQSAAGRHKAFSTCASHLAVVTLFYGTVISMYMRPRSG 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 282396069 271 SP--FDGAVAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15424  242 STpdRDKQIAVFYIVITPLLNPIIYTLRNKDVHGAA 277
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
31-306 3.57e-89

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 267.65  E-value: 3.57e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNL-LILLTVwADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15413    3 LFGLFLVIYLTTVMGNLgMIILTR-LDSRLQT-PMYFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLAFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15413   81 LTFIISELFLLSAMAYDRYVAICNPLLYTVIMSQRVCIVLVAIPYLYSFFVALFHTIKTFRLSFCGSNVINHFYCDDLPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGS 269
Cdd:cd15413  161 LALSCSDTHEKELIILIFAGFNLISSLLIVLVSYLFILSAILRIRSAEGRQKAFSTCGSHLTVVTIFYGTLIFMYLQPKS 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 282396069 270 KSPF--DGAVAVFYTVVTPLLNPLIYTLRNQEVKSALKR 306
Cdd:cd15413  241 SHSLdtDKMASVFYTLVIPMLNPLIYSLRNKEVKDALKK 279
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
30-297 9.83e-89

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 266.22  E-value: 9.83e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15937    2 LLFVLFLLFYLIILPGNILIILTIQGDPQLGS-PMYFFLANLALLDICYSSITPPKMLADFFSERKTISYGGCMAQLFFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15937   81 HFLGAAEMFLLVAMAYDRYVAICKPLHYTTVVNRRVCCVLVGASWAGGFIHSIIQVALIIRLPFCGPNVLDNFFCDITQV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVhAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGS 269
Cdd:cd15937  161 IKLACTNTYTVELLMFSNSGLVILLCFLLLLISYAFLL-AKLRTHSSKGKSKAASTCITHIIIVFVMFGPAIYIYARPFR 239
                        250       260
                 ....*....|....*....|....*...
gi 282396069 270 KSPFDGAVAVFYTVVTPLLNPLIYTLRN 297
Cdd:cd15937  240 SFPMDKVVAVFHTVIFPLLNPMIYTLRN 267
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
30-304 8.61e-86

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 259.33  E-value: 8.61e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15428    2 LLFILFLIIYLMTVLGNLLLVLLVIVDSHLHT-PMYFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15428   81 LSFGITECALLSVMSYDRYVAICLPLRYSLIMTWKVCISLATGSWVGGLLVSAVDTAFTLNLSFGGHNKINHFLCEMPAL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGS 269
Cdd:cd15428  161 LKLASTDTHQAEMAMFIMCVFTLVLPVLLILASYTRIIYTVFGMQSLTGRLKAFSTCSSHLMVVSLFYGSVLSTYMRPKS 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 282396069 270 KSP--FDGAVAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15428  241 STSkeYDKMISVFYIIVTPMLNPLIYSLRNKEVKHAL 277
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
31-304 4.75e-82

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 249.71  E-value: 4.75e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15233    3 LFVTFLLAYIVTIGGNLSILAAILLEPKLHT-PMYFFLGNLSLLDIGCISVTVPQMLVHLLSHKRTISYAACLSQLFFFH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVL 190
Cdd:cd15233   82 LLAGADCFLLTAMAYDRYLAICQPLTYSVRMSWRVQTALVGISCACAFTNALTHTVAMSTLKFCGPNVINHFFCDLPPLF 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 191 RLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGS- 269
Cdd:cd15233  162 QLSCSSTHLNELLLFVFAFFMALAPCVLIVVSYAHVVAAVLRIRSAEGRRKAFSTCGSHLTVVCIFYGTGVFSYMRLGSv 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 282396069 270 -KSPFDGAVAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15233  242 ySSDKDKVIGILNTVLSPMLNPLIYSLRNKDVKGAL 277
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
32-304 8.06e-80

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 243.91  E-value: 8.06e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  32 FLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHF 111
Cdd:cd15236    4 FALFLAMYLTTVLGNLLIILLIRLDSHLHT-PMYFFLSHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYFFIF 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 112 LGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVLR 191
Cdd:cd15236   83 FGCLDSFLLAVMAYDRYVAICHPLHYTAIMRPELCVLLVAGSWVLTCFHALLHTLLLARLSFCADNVIPHFFCDLVALLK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 192 LACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGSKS 271
Cdd:cd15236  163 LSCSSTSLNELVIFTEGGLLFVLPLLLILGSYIRIAATILKVPSTKGICKAFSTCGSHLSVVFLYYGTIIGVYFFPSSNN 242
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 282396069 272 PF--DGAVAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15236  243 SSdkDIVASVMYTVVTPMLNPFIYSLRNRDIKGAL 277
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
31-304 3.86e-78

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 239.69  E-value: 3.86e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15433    3 LFVVVLIFYLLTLVGNTIIILLSVRDLRLHT-PMYYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFISL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVL 190
Cdd:cd15433   82 ALGSAECVLLAVMAFDRYAAVCRPLHYAALMSPRLCQTLASISWLSGFVNSVAQTGLLAERPLCGHRLLDHFFCEMPVFL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 191 RLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGSK 270
Cdd:cd15433  162 KLACGDDETTEVQMFVARVVILLLPAALILGSYGHVAHAVLRIKSSAGRRRAFGTCGSHLMVVFLFYGSAIYTYLQPIHR 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 282396069 271 -SPFDGA-VAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15433  242 ySQAHGKfVSLFYTVMTPALNPLIYTLRNKDVKGAL 277
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
31-304 1.46e-74

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 230.38  E-value: 1.46e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNL-LILLTVWaDPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15405    3 LFFLFLGIYVVTVVGNLgLITLICL-NSHLHT-PMYFFLFNLSFIDLCYSSVFTPKMLMNFVSEKNTISYAGCMTQLFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAV 189
Cdd:cd15405   81 CFFVISECYVLTAMAYDRYVAICNPLLYTVTMSPQVCSLLMLGSYVMGFAGAMAHTGCMLRLTFCDSNIINHYMCDILPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 190 LRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAGS 269
Cdd:cd15405  161 LQLSCTSTYVNELVVFVVVGINIIVPSVTIFISYALILSNILHISSTEGRSKAFSTCSSHIIAVSLFFGSGAFMYLKPSS 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 282396069 270 KSPFD-GAVA-VFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15405  241 VGSVNqGKVSsVFYTNVVPMLNPLIYSLRNKDVKLAL 277
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
29-304 1.97e-70

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 219.86  E-value: 1.97e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYF 108
Cdd:cd15223    1 HWLSLPFLLLYLVALVANSLLLLIIKLERSLH-QPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 109 FHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPA 188
Cdd:cd15223   80 IHFFTAMESSILLVMALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSNVIEHCYCDHMA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 189 VLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYY--VPCIFIYLR 266
Cdd:cd15223  160 LVSLACGDTTINSIYGLAVAWLIVGSDIILIFFSYALILRAVLRLASGEARSKALNTCGSHLIVILFFYtaVLVSSLTYR 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 282396069 267 AGSKSPFDGAV--AVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15223  240 FGKTIPPDVHVllSVLYILIPPALNPIIYGVRTKEIRQGF 279
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
33-300 6.17e-58

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 187.88  E-value: 6.17e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  33 LVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHFL 112
Cdd:cd15917    5 IPFCAMYLVALLGNITILFVIKIESSLH-EPMYLFLAMLAATDLVLSTSTVPKMLGIFWFNAREISFDACLAQMFFIHSF 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 113 GSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVLRL 192
Cdd:cd15917   84 TAMESGVLLAMAFDRYVAICYPLRYTTILTNTVVGKIGLAILLRAVALIIPLPLLVRRLPYCGSNVISHSYCEHMAVVKL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 193 ACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYL--RAGSK 270
Cdd:cd15917  164 ACGDTRVNSIYGLFVALLIVGFDLLFIALSYVLILRAVLQLPSKEARLKALSTCGSHICVILIFYTPALFSFLthRFGHH 243
                        250       260       270
                 ....*....|....*....|....*....|..
gi 282396069 271 SP--FDGAVAVFYTVVTPLLNPLIYTLRNQEV 300
Cdd:cd15917  244 VPphVHILLANLYLLLPPMLNPIVYGVRTKQI 275
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
35-300 4.06e-56

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 183.00  E-value: 4.06e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  35 FFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHFLGS 114
Cdd:cd15950    7 FCSMYVIALLGNGTILLVIKLDPSLHE-PMYYFLCMLAVIDLVMSTSIVPKMLSIFWLGSAEISFEACFTQMFFVHSFTA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 115 TQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVLRLAC 194
Cdd:cd15950   86 VESGVLLAMAFDRYVAICHPLRYSAILTSQVIAQIGLAIVLRALLFMTPLTCLVTSLPYCGSRVVPHSYCEHMAVVKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 195 ADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIF-IYL-RAGSKSP 272
Cdd:cd15950  166 ADPRPSSLYSITGSTLVVGTDSAFIAVSYGLILRAVLGLSSKEARLKAFSTCGSHVCVILLFYIPGLLsIYTqRFGQGVP 245
                        250       260       270
                 ....*....|....*....|....*....|
gi 282396069 273 FDGAV--AVFYTVVTPLLNPLIYTLRNQEV 300
Cdd:cd15950  246 PHTQVllADLYLLVPPMLNPIIYGMRTKQI 275
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
35-300 1.40e-55

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 181.72  E-value: 1.40e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  35 FFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHFLGS 114
Cdd:cd15221    7 FCSMYIVALLGNSLLLFVIVTERSLHE-PMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFVHFVFV 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 115 TQCFLYTLMAYDRYLAICQPLRYP-VLMNGKLCTILVAGAWVAGSIHGSIQATLTfRLPYCGPKEVDYFFCDIPAVLRLA 193
Cdd:cd15221   86 TESAILLAMAFDRYVAICYPLRYTtILTHSVIGKIGVAAVARSFCIVFPFVFLLK-RLPYCGHNVIPHTYCEHMGIARLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 194 CADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYL--RAGSKS 271
Cdd:cd15221  165 CADITVNIWYGLTVALLTVGLDVVLIAVSYALILRAVFRLPSKDARLKALSTCGSHVCVILMFYTPAFFSFLthRFGRHI 244
                        250       260       270
                 ....*....|....*....|....*....|.
gi 282396069 272 P--FDGAVAVFYTVVTPLLNPLIYTLRNQEV 300
Cdd:cd15221  245 PrhVHILLANLYVLVPPMLNPIVYGVKTKQI 275
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
35-300 2.97e-54

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 178.34  E-value: 2.97e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  35 FFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHFLGS 114
Cdd:cd15952    7 FCAVYLIALLGNCTILFVIKTEQSLH-QPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFIHTFTG 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 115 TQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVLRLAC 194
Cdd:cd15952   86 MESAVLVAMAFDRYVAICNPLRYTTILTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCGHNIIPHTYCEHMGIAKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 195 ADTTVNelvtfVDIGVVAASCF----MLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYL--RAG 268
Cdd:cd15952  166 ASIRIN-----IIYGLFAISVLvldvILIALSYVLILRAVFRLPSHDARLKALSTCGSHVCVILAFYTPALFSFLthRFG 240
                        250       260       270
                 ....*....|....*....|....*....|....
gi 282396069 269 SKSP--FDGAVAVFYTVVTPLLNPLIYTLRNQEV 300
Cdd:cd15952  241 HNIPryIHILLANLYVVLPPMLNPVIYGVRTKQI 274
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
35-300 6.02e-52

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 172.15  E-value: 6.02e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  35 FFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHFLGS 114
Cdd:cd15951    7 FCIMYAVALLGNFTILFIVKTEPSLH-EPMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFIHSFST 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 115 TQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVLRLAC 194
Cdd:cd15951   86 MESGIFVAMALDRYVAICNPLRHSTILTNSVVAKIGLAVVLRGGILVSPHPFLLRRLPYCRTNIIPHTYCEHMAVVKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 195 ADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYL--RAGSKSP 272
Cdd:cd15951  166 ADTRVSRAYGLSVAFLVGGLDVIFIAVSYIQILRAVFKLPSKEARLKTFGTCGSHICVILVFYIPALFSFLthRFGHNVP 245
                        250       260       270
                 ....*....|....*....|....*....|
gi 282396069 273 --FDGAVAVFYTVVTPLLNPLIYTLRNQEV 300
Cdd:cd15951  246 phVHILIANVYLLVPPMLNPIIYGVRTKQI 275
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
31-300 2.91e-51

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 170.37  E-value: 2.91e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15222    3 ISIPFCLLYLVALLGNSTILFVIKTEPSLH-EPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFFIH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLmngkLCTILVAGAWVAGSIHGSI-QATLTF---RLPYCGPKEVDYFFCDI 186
Cdd:cd15222   82 TFSFMESSVLLAMAFDRFVAICNPLRYASI----LTNSRIAKIGLAIVLRSVLlLLPLPFllkRLPFCHSNVLSHSYCLH 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 187 PAVLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCI---FI 263
Cdd:cd15222  158 QDVMKLACSDTRVNSIYGLFVVLSTMGLDSLLILLSYVLILKTVLGIASREERLKALNTCVSHICAVLIFYVPMIglsMV 237
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 282396069 264 YLRAGSKSPFDGAV-AVFYTVVTPLLNPLIYTLRNQEV 300
Cdd:cd15222  238 HRFGKHASPLVHVLmANVYLLVPPVLNPIIYSVKTKQI 275
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
35-300 3.26e-50

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 167.83  E-value: 3.26e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  35 FFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHFLGS 114
Cdd:cd15953    7 FCLMYIVTLLGNCTILFVVGKEQSLH-KPMYLLLCMLALTDLVLSTSVVPKALCIFWFNLKEITFSGCLTQMFFIHTLSI 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 115 TQCFLYTLMAYDRYLAICQPLRYPVLMNGKlctiLVAGAWVAGSIHGSIQAT----LTFRLPYCGPKEVDYFFCDIPAVL 190
Cdd:cd15953   86 MESAVLVAMAFDRYVAICNPLRYATILTNS----RIAKLGLVGLIRGVLLILplplLLSRLPFCANRIIPHTYCEHMAVV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 191 RLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYL--RAG 268
Cdd:cd15953  162 KLACGDTTINRIYGLVVALLVVGLDLLLIALSYALIIRAVLRLSSKKARQKALNTCTAHICVILMSYTPALFSFLthRFG 241
                        250       260       270
                 ....*....|....*....|....*....|....
gi 282396069 269 SKSP--FDGAVAVFYTVVTPLLNPLIYTLRNQEV 300
Cdd:cd15953  242 QGIAphIHIILANLYLLVPPMLNPIIYGVKTKEI 275
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
35-301 4.73e-45

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 154.68  E-value: 4.73e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  35 FFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHFLGS 114
Cdd:cd15948    8 FCSAFTVALLGNCTLLYVIKTEPSLH-EPMFYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFNACLVQMFFLHSFSI 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 115 TQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVLRLAC 194
Cdd:cd15948   87 MESAVLLAMAFDRYVAICNPLRYATILTNSVITKIGLAALARAVTLMTPLPFLLRRLPYCRSHVIAHCYCEHMAVVKLAC 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 195 ADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIF---IYLRAGSKS 271
Cdd:cd15948  167 GDTRFNNIYGIAVALFIVGLDLMFIILSYVFILRAVLSLASKEEQLKAFGTCGSHICAILVFYTPVVLsstMHRFARHVA 246
                        250       260       270
                 ....*....|....*....|....*....|.
gi 282396069 272 P-FDGAVAVFYTVVTPLLNPLIYTLRNQEVK 301
Cdd:cd15948  247 PhVHILLANFYLLFPPMMNPIVYGVKTKQIR 277
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
30-300 1.72e-43

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 150.40  E-value: 1.72e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFF 109
Cdd:cd15956    2 WLSLPFCFIYVLSLLGNGVLLSVVWKEHRLH-QPMFLFLAMLAATDLVLALSTAPKLLAILWFGATAISSYVCLSQMFLV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 110 HFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNgKLCTILVAGAWVAGSIHGSIQ-ATLTFRLPYCGPKEVDYFFCDIPA 188
Cdd:cd15956   81 HAFSAMESGVLVAMALDRFVAICNPLHYATILT-LEVVAKAGLLLALRGVAIVIPfPLLVCRLSFCASHTIAHTYCEHMA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 189 VLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYL--R 266
Cdd:cd15956  160 VVKLACGATTVDSLYGLALALFIGGGDVLFIAYSYGLIVKTVLRLPSPEARGKAFSTCSAHICVILFFYIPGLLSVLmhR 239
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 282396069 267 AGSKSPFDGAV--AVFYTVVTPLLNPLIYTLRNQEV 300
Cdd:cd15956  240 FGHSVPSAAHVllSNLYLLLPPALNPIVYGIRTKQI 275
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
35-307 1.08e-42

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 148.42  E-value: 1.08e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069   35 FFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHFLGS 114
Cdd:pfam13853   1 FCLMYLIIFLGNGTILFVIKTESSLH-QPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  115 TQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVLRLAC 194
Cdd:pfam13853  80 MESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSC 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  195 ADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYL--RAGSKSP 272
Cdd:pfam13853 160 ADIKVNNIYGLFVVTSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMvhRFGHNVP 239
                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 282396069  273 --FDGAVAVFYTVVTPLLNPLIYTLRNQEVKSALKRL 307
Cdd:pfam13853 240 plLQIMMANAYLFFPPVLNPIVYSVKTKQIRDCVKRM 276
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
14-301 1.86e-40

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 142.99  E-value: 1.86e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  14 TDFLLLGLAHPPNLRAFLFLVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPA 93
Cdd:cd15949    2 STFILLGIPGLEPLHVWISIPFCSMYLIAVLGNCTILFIIKSEPSLH-QPMYFFLSMLAIIDLVLSTSTMPKLLAIFWFS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  94 SKVIAFGGCAAQLYFFHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPY 173
Cdd:cd15949   81 SNEIPLHACLLQMFLIHSFSAIESGIFLAMAFDRYVAICNPLRHKTILTNTTVIRIGLAAVIRGVLYISPLPLLVRRLPW 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 174 CGPKEVDYFFCDIPAVLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVV 253
Cdd:cd15949  161 YRTNIIAHSYCEHMAVVGLACGDVSINNHYGLTIGFLVLIMDSLFIVLSYIMILRVVQRLATSEARLKTFGTCVSHVCAI 240
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 282396069 254 TVYYVPCIFIYL--RAGSK--SPFDGAVAVFYTVVTPLLNPLIYTLRNQEVK 301
Cdd:cd15949  241 LAFYVPIAVSSLihRFGQNvpPPTHILLANFYLLIPPMLNPIVYGVRTKQIQ 292
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
35-300 1.99e-38

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 137.26  E-value: 1.99e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  35 FFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHFLGS 114
Cdd:cd15954    7 FCFMYIIAMVGNCGLLYLIWIEEALH-RPMYYFLSMLSFTDITLCTTMVPKAMCIFWFNLKEISFNACLVQMFFVHTFTG 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 115 TQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAVLRLAC 194
Cdd:cd15954   86 MESGVLMLMALDRYVAICYPLRYATILTNPVITKAGLATFLRGVMLIIPFPLLTKRLPYCRGNFIPHTYCDHMSVVKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 195 ADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYL--RAGSKSP 272
Cdd:cd15954  166 ANIRVDAIYGLMVALLIGGFDILCISVSYAMILRAVVSLSSKEARSKAFSTCTAHICAIVITYTPAFFTFFahRFGGHHI 245
                        250       260       270
                 ....*....|....*....|....*....|.
gi 282396069 273 FDGA---VAVFYTVVTPLLNPLIYTLRNQEV 300
Cdd:cd15954  246 TPHIhiiMANLYLLLPPMMNPIVYGVKTKQI 276
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
35-300 5.38e-32

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 120.26  E-value: 5.38e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  35 FFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHFLGS 114
Cdd:cd15955    7 FCIMFLLAVLGNCTLLIVIKRERSLH-QPMYIFLAMLAATDLGLCPCILPKMLAIFWFQLREISFNACLAQMFFIHTLQA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 115 TQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATL-TFRLPYCGPKEVDYFFCDIPAVLRLA 193
Cdd:cd15955   86 FESGILLAMALDRYVAICHPLRHSSILTPQVLLGIGVLVVVRAVVLIIPCPLLiKLRLHHFRSTVISHSYCEHMAVVKLA 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 194 CADTTVNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYL--RAGSKS 271
Cdd:cd15955  166 ADDVRVNKIYGLFVAFSILGFDIIFITTSYALIFRAVFRLPQKEARLKAFNTCTAHIFVFLLFYTLAFFSFFahRFGHHV 245
                        250       260       270
                 ....*....|....*....|....*....|.
gi 282396069 272 P--FDGAVAVFYTVVTPLLNPLIYTLRNQEV 300
Cdd:cd15955  246 ApyVHILLSNLYLLVPPVLNPIVYGVKTKQI 276
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
45-293 1.06e-29

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 113.55  E-value: 1.06e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069   45 GNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIIL-NFTPASKVIAFGGCAAQLYFFHFLGSTQCFLYTLM 123
Cdd:pfam00001   1 GNLLVILVILRNKKLR-TPTNIFLLNLAVADLLFSLLTLPFWLVyYLNHGDWPFGSALCKIVGALFVVNGYASILLLTAI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  124 AYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEvdyFFCDIPAVLrlacaDTTVNELV 203
Cdd:pfam00001  80 SIDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVPEGNV---TVCFIDFPE-----DLSKPVSY 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  204 TFVDIGVVAASCFMLILLSYANIVHAILKIRTADGR-------KRAFSTCGSHLTVVTVYYVP-----CIFIYLRAGSKS 271
Cdd:pfam00001 152 TLLISVLGFLLPLLVILVCYTLIIRTLRKSASKQKSsertqrrRKALKTLAVVVVVFILCWLPyhivnLLDSLALDCELS 231
                         250       260
                  ....*....|....*....|....*
gi 282396069  272 PFDG---AVAVFYTVVTPLLNPLIY 293
Cdd:pfam00001 232 RLLDkalSVTLWLAYVNSCLNPIIY 256
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
31-297 3.94e-18

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 82.72  E-value: 3.94e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd00637    1 LAVLYILIFVVGLVGNLLVILVILRNRRLR-TVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQS 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQATLTFRLPYCGPKEVDYFFCDIPAvl 190
Cdd:cd00637   80 VSLLASILTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLLGWGVYDYGGYCCCCLCWPDLTL-- 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 191 rlacadttvNELVTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSH-----------LTVVTVYYV- 258
Cdd:cd00637  158 ---------SKAYTIFLFVLLFLLPLLVIIVCYVRIFRKLRRHRRRIRSSSSNSSRRRRrrrerkvtktlLIVVVVFLLc 228
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 282396069 259 --PCIFIYLRAGSKSPFDGAVAVFYTVVTPL------LNPLIYTLRN 297
Cdd:cd00637  229 wlPYFILLLLDVFGPDPSPLPRILYFLALLLaylnsaINPIIYAFFN 275
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
30-304 2.82e-10

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 59.88  E-value: 2.82e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVP----RIILNFTPASKVIafggCAAQ 105
Cdd:cd14967    1 LLAVFLSLIILVTVFGNLLVILAVYRNRRLR-TVTNYFIVSLAVADLLVALLVMPfsavYTLLGYWPFGPVL----CRFW 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 106 LYFFHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQatLTFRLPYCGPKEVDYFFCD 185
Cdd:cd14967   76 IALDVLCCTASILNLCAISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISLPP--LVGWRDETQPSVVDCECEF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 186 IPAVLRLACADTtvnelvtfvdIGVVAASCFMLILlsYANIVHAILKirtadgRKRAFSTcgshLTVVTVYYVPC----- 260
Cdd:cd14967  154 TPNKIYVLVSSV----------ISFFIPLLIMIVL--YARIFRVARR------ELKAAKT----LAIIVGAFLLCwlpff 211
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 282396069 261 ----IFIYLRAGSKSPFDGAVAVFYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd14967  212 iiylVSAFCPPDCVPPILYAVFFWLGYLNSALNPIIYALFNRDFRRAF 259
7tmA_Dop1R2-like cd15067
dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the ...
31-159 1.35e-06

dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled dopamine 1-like receptor 2 is expressed in Drosophila heads and it shows significant sequence similarity with vertebrate and invertebrate dopamine receptors. Although the Drosophila Dop1R2 receptor does not cluster into the D1-like structural group, it does show pharmacological properties similar to D1-like receptors. As shown in vertebrate D1-like receptors, agonist stimulation of Dop1R2 activates adenylyl cyclase to increase cAMP levels and also generates a calcium signal through stimulation of phospholipase C.


Pssm-ID: 320195 [Multi-domain]  Cd Length: 262  Bit Score: 48.89  E-value: 1.35e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHARPMYILLGvLSFLDMWLSSVIVPRIILnFTPASKVIAFGGCAAQLYF-F 109
Cdd:cd15067    2 LGVVLSLFCLVTVAGNLLVILAVLRERYLRTVTNYFIVS-LAVADLLVGSIVMPFSIL-HEMTGGYWLFGRDWCDVWHsF 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 282396069 110 HFLGSTQCFL-YTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSI 159
Cdd:cd15067   80 DVLASTASILnLCVISLDRYWAITDPISYPSRMTKRRALIMIALVWICSAL 130
7tmA_CB2 cd15341
cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G ...
40-159 1.97e-06

cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320463 [Multi-domain]  Cd Length: 279  Bit Score: 48.30  E-value: 1.97e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  40 ILTQLGNLLILLTVWADPKLHARPMYILLGVLSFLDmWLSSVIVPRIILNFTpaskviAFGGCAAQLYFFHFLGS-TQCF 118
Cdd:cd15341   12 LLCILENVAVLYLILSSPKLRRKPSYLFIGSLALAD-FLASVVFACSFVDFH------VFHGVDSSAIFLLKLGGvTMSF 84
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 282396069 119 LYT-----LMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSI 159
Cdd:cd15341   85 TASlgsllLMAFDRYVCIYYPSEYKALVTRKRALVALAVMWVLTAL 130
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
34-304 3.83e-06

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 47.67  E-value: 3.83e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  34 VFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHFLG 113
Cdd:cd14972    4 VAIVLGVFIVVENSLVLAAIIKNRRLH-KPMYILIANLAAADLLAGIAFVFTFLSVLLVSLTPSPATWLLRKGSLVLSLL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 114 STQCFLYTLmAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAgsihgsiqATLTFRLPYCGPKEVDyffCDIPAVLRLA 193
Cdd:cd14972   83 ASAYSLLAI-AVDRYISIVHGLTYVNNVTNKRVKVLIALVWVW--------SVLLALLPVLGWNCVL---CDQESCSPLG 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 194 cADTTVNELVTFVdigVVAASCFMLILLSYANIVhAILKIRTADGRKRAFSTCGSH----------LTVVTVYYVPC--- 260
Cdd:cd14972  151 -PGLPKSYLVLIL---VFFFIALVIIVFLYVRIF-WCLWRHANAIAARQEAAVPAQpstsrklaktVVIVLGVFLVCwlp 225
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 282396069 261 IFIYLRAGSKSPFDGAVAV------FYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd14972  226 LLILLVLDVLCPSVCDIQAvfyyflVLALLNSAINPIIYAFRLKEMRRAV 275
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
37-161 1.08e-05

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 46.09  E-value: 1.08e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  37 LIYILTQLGNLLILLTVWADPKLHARPMY---------ILLGVLsfldmwlssVIvpriilnftPASKVIAFGGCAAqly 107
Cdd:cd14968    9 LIAVLSVLGNVLVIWAVKLNRALRTVTNYfivslavadILVGAL---------AI---------PLAILISLGLPTN--- 67
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 282396069 108 fFHFLGSTQCFLYTL----------MAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHG 161
Cdd:cd14968   68 -FHGCLFMACLVLVLtqssifsllaIAIDRYLAIKIPLRYKSLVTGRRAWGAIAVCWVLSFLVG 130
7tmA_TAAR5-like cd15317
trace amine-associated receptor 5 and similar receptors, member of the class A family of ...
31-226 1.08e-05

trace amine-associated receptor 5 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR5, TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified trace amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320440 [Multi-domain]  Cd Length: 290  Bit Score: 46.29  E-value: 1.08e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15317    3 IYIVLVLAMLITVSGNLVVIISISHFKQLHS-PTNMLVLSLATADFLLGLCVMPFSMIRTVETCWYFGDLFCKFHTGLDL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHgsiqatlTFRLPYCG--PKEVDYFFCDIPA 188
Cdd:cd15317   82 LLCTTSIFHLCFIAIDRYYAVCDPLRYPSKITVQVAWRFIAIGWLVPGIY-------TFGLIYTGanDEGLEEYSSEISC 154
                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 282396069 189 VlrlACADTTVNELVTFVDIGVVAASCFMLILLsYANI 226
Cdd:cd15317  155 V---GGCQLLFNKIWVLLDFLTFFIPCLIMIGL-YAKI 188
7tmA_5-HT7 cd15329
serotonin receptor subtype 7, member of the class A family of seven-transmembrane G ...
29-156 1.10e-05

serotonin receptor subtype 7, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT7 receptor, one of 14 mammalian serotonin receptors, is a member of the class A of GPCRs and is activated by the neurotransmitter serotonin (5-hydroxytryptamine, 5-HT). 5-HT7 receptor mainly couples to Gs protein, which positively stimulates adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. 5-HT7 receptor is expressed in various human tissues, mainly in the brain, the lower gastrointestinal tract and in vital blood vessels including the coronary artery. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320452 [Multi-domain]  Cd Length: 260  Bit Score: 46.11  E-value: 1.10e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNftpaskviafggcaaQLYF 108
Cdd:cd15329    1 VLIGIVLLIIILGTVVGNALVIIAVCLVKKLR-TPSNYLIVSLAVSDLLVALLVMPLAIIY---------------ELSG 64
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 282396069 109 FHFLGSTQCFLYTLM---------------AYDRYLAICQPLRYPVLMNGKLCTILVAGAWVA 156
Cdd:cd15329   65 YWPFGEILCDVWISFdvllctasilnlcaiSVDRYLVITRPLTYAVKRTPKRMALMIAIVWLL 127
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
30-155 1.53e-05

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 45.62  E-value: 1.53e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMwLSSVIVpriilnfTPASKVIAFGGCaaqlyff 109
Cdd:cd15055    2 LLYIVLSSISLLTVLGNLLVIISISHFKQLHT-PTNLLLLSLAVADF-LVGLLV-------MPFSMIRSIETC------- 65
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 282396069 110 HFLGSTQCFLYT---------------LMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWV 155
Cdd:cd15055   66 WYFGDTFCKLHSsldyiltsasifnlvLIAIDRYVAVCDPLLYPTKITIRRVKICICLCWF 126
7tmA_D1-like_dopamine_R cd15057
D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G ...
33-155 1.64e-05

D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320185 [Multi-domain]  Cd Length: 299  Bit Score: 45.88  E-value: 1.64e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  33 LVFFLIYILTQLGNLLILLTVWADPKLHARPMYILLGVLSFLDMWLSSVIVP----RIILNFTPaskviaFGGCAAQLYF 108
Cdd:cd15057    5 CILYLLVLLTLLGNALVIAAVLRFRHLRSKVTNYFIVSLAVSDLLVAILVMPwaavNEVAGYWP------FGSFCDVWVS 78
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 282396069 109 FHFLGSTQCFL-YTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWV 155
Cdd:cd15057   79 FDIMCSTASILnLCVISVDRYWAISSPFRYERRMTRRRAFIMIAVAWT 126
7tmA_Vasopressin-like cd14986
vasopressin receptors and its related G protein-coupled receptors, member of the class A ...
37-156 3.56e-05

vasopressin receptors and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this group form a subfamily within the class A G-protein coupled receptors (GPCRs), which includes the vasopressin and oxytocin receptors, the gonadotropin-releasing hormone receptors (GnRHRs), the neuropeptide S receptor (NPSR), and orphan GPR150. These receptors share significant sequence homology with each other, suggesting that they have a common evolutionary origin. Vasopressin, also known as arginine vasopressin or anti-diuretic hormone, is a neuropeptide synthesized in the hypothalamus. The actions of vasopressin are mediated by the interaction of this hormone with three tissue-specific subtypes: V1AR, V1BR, and V2R. Although vasopressin differs from oxytocin by only two amino acids, they have divergent physiological functions. Vasopressin is involved in regulating osmotic and cardiovascular homeostasis, whereas oxytocin plays an important role in the uterus during childbirth and in lactation. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR has also been associated with asthma and allergy. GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors.


Pssm-ID: 320117 [Multi-domain]  Cd Length: 295  Bit Score: 44.67  E-value: 3.56e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  37 LIYILTQLGNLLILLTVWADPKLHARpMYILLGVLSFLDMWLSSV-IVPRIILNFTPA-------SKVIAFGGCaaqlyf 108
Cdd:cd14986    9 VLFVFTLVGNGLVILVLRRKRKKRSR-VNIFILNLAIADLVVAFFtVLTQIIWEATGEwvagdvlCRIVKYLQV------ 81
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 282396069 109 fhFLGSTQCFLYTLMAYDRYLAICQPLRypVLMNGKLCTILVAGAWVA 156
Cdd:cd14986   82 --VGLFASTYILVSMSLDRYQAIVKPMS--SLKPRKRARLMIVVAWVL 125
7tmA_SREB-like cd15005
super conserved receptor expressed in brain and related proteins, member of the class A family ...
37-154 5.23e-05

super conserved receptor expressed in brain and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320134 [Multi-domain]  Cd Length: 329  Bit Score: 44.37  E-value: 5.23e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  37 LIYILTQLGNLLILLTVWADPKLHARPMYILLGvLSFLDMWLSSVIVPRIILNFTPAS---------KVIAFggcAAQLY 107
Cdd:cd15005    9 LILCVSLAGNLLFSVLIVRDRSLHRAPYYFLLD-LCLADGLRSLACFPFVMASVRHGSgwiygalscKVIAF---LAVLF 84
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 282396069 108 FFHflgstQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAW 154
Cdd:cd15005   85 CFH-----SAFTLFCIAVTRYMAIAHHRFYAKRMTFWTCLAVICMAW 126
7tmA_Histamine_H1R cd15050
histamine subtype H1 receptor, member of the class A family of seven-transmembrane G ...
29-154 6.28e-05

histamine subtype H1 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine receptor subtype H1R, a member of histamine receptor family, which belongs to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). H1R selectively interacts with the G(q)-type G protein that activates phospholipase C and the phosphatidylinositol pathway. Antihistamines, a widely used anti-allergy medication, act on the H1 subtype and produce drowsiness as a side effect. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320178 [Multi-domain]  Cd Length: 263  Bit Score: 43.57  E-value: 6.28e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLHARPMYILLGvLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYF 108
Cdd:cd15050    1 APLGIALSTISLITVILNLLVLYAVRTERKLHTVGNLYIVS-LSVADLIVGAVVMPLNIVYLLESKWILGRPVCLFWLSM 79
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 282396069 109 FHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAW 154
Cdd:cd15050   80 DYVASTASIFSLFILCIDRYRSVQQPLKYLKYRTKTRASLMISGAW 125
7tmA_Vasopressin_Oxytocin cd15196
vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G ...
37-156 7.09e-05

vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) and oxytocin are synthesized in the hypothalamus and are released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320324 [Multi-domain]  Cd Length: 264  Bit Score: 43.76  E-value: 7.09e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  37 LIYILTQLGNLLILLTVWADPKLHARpMYILLGVLSFLDMWLSSV-IVPRIILNFTpaskVIAFGG---CAAQLYF--FH 110
Cdd:cd15196    9 TILVLALFGNSCVLLVLYRRRRKLSR-MHLFILHLSVADLLVALFnVLPQLIWDIT----YRFYGGdllCRLVKYLqvVG 83
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 282396069 111 FLGSTqcFLYTLMAYDRYLAICQPLRYPVLMNgKLCTILVAGAWVA 156
Cdd:cd15196   84 MYASS--YVLVATAIDRYIAICHPLSSHRWTS-RRVHLMVAIAWVL 126
7tmA_Octopamine_R cd15063
octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G ...
32-155 7.16e-05

octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor for octopamine (OA), which functions as a neurotransmitter, neurohormone, and neuromodulator in invertebrate nervous system. Octopamine (also known as beta, 4-dihydroxyphenethylamine) is an endogenous trace amine that is highly similar to norepinephrine, but lacks a hydroxyl group, and has effects on the adrenergic and dopaminergic nervous systems. Based on the pharmacological and signaling profiles, the octopamine receptors can be classified into at least two groups: OA1 receptors elevate intracellular calcium levels in muscle, whereas OA2 receptors activate adenylate cyclase and increase cAMP production.


Pssm-ID: 320191 [Multi-domain]  Cd Length: 266  Bit Score: 43.64  E-value: 7.16e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  32 FLVFFLIYILTQLGNLLILLTVWADPKLHARPMYILLGvLSFLDMWLSSVIVPRIILNftPASKVIAFGGCAAQLYFFHF 111
Cdd:cd15063    4 LLVLTFLNVLVVLGNLLVIAAVLCSRKLRTVTNLFIVS-LACADLLVGTLVLPFSAVN--EVLDVWIFGHTWCQIWLAVD 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 282396069 112 LGSTQCFLYTLMA--YDRYLAICQPLRYPVLMNGKLCTILVAGAWV 155
Cdd:cd15063   81 VWMCTASILNLCAisLDRYLAITRPIRYPSLMSTKRAKCLIAGVWV 126
7tmA_Cannabinoid_R cd15099
cannabinoid receptors, member of the class A family of seven-transmembrane G protein-coupled ...
36-141 7.57e-05

cannabinoid receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320227 [Multi-domain]  Cd Length: 281  Bit Score: 43.67  E-value: 7.57e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  36 FLIYILTQLGNLLILLTVWADPKLHARPMYILLGVLSFLDMwLSSVIVPRIILNFTPASKVIafggcAAQLYFFHFLGST 115
Cdd:cd15099    8 FLAGPVTFLENILVLLTILSSTALRRRPSYLFIGSLALADM-LASVIFTISFLDFHVFHQRD-----SRNLFLFKLGGVT 81
                         90       100       110
                 ....*....|....*....|....*....|.
gi 282396069 116 QCFLYT-----LMAYDRYLAICQPLRYPVLM 141
Cdd:cd15099   82 MAFTASvgsllLTALDRYLCIYQPSNYKLLV 112
7tmA_Beta_AR cd15058
beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane ...
29-155 8.06e-05

beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta adrenergic receptor (beta adrenoceptor), also known as beta AR, is activated by hormone adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate, as well as pulmonary physiology. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of beta-ARs can lead to cardiac dysfunction such as arrhythmias or heart failure. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320186 [Multi-domain]  Cd Length: 305  Bit Score: 43.59  E-value: 8.06e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLHARPMYILLGvLSFLDMWLSSVIVPriilnftPASKVIAFGGCAaqlyf 108
Cdd:cd15058    1 PGLLLLLALIILAIVVGNLLVIIAIARTSRLQTMTNIFITS-LACADLVMGLLVVP-------LGATIVVTGKWQ----- 67
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 282396069 109 fhfLGSTQCFLYT---------------LMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWV 155
Cdd:cd15058   68 ---LGNFWCELWTsvdvlcvtasietlcVIAVDRYIAITRPLRYQVLLTKRRARVIVCVVWI 126
7tmA_TAAR5 cd15318
trace amine-associated receptor 5, member of the class A family of seven-transmembrane G ...
31-163 9.64e-05

trace amine-associated receptor 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptor 5 is one of the 15 identified amine-activated G protein-coupled receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320441 [Multi-domain]  Cd Length: 282  Bit Score: 43.31  E-value: 9.64e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15318    3 IYLACAIGMLIIVLGNLFVVVTVSHFKALHT-PTNFLLLSLALADMLLGLTVLPFSTIRSVESCWYFGDSFCRLHTCLDT 81
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSI 163
Cdd:cd15318   82 LFCLTSIFHLCFISIDRHCAICDPLLYPSKFTIRVACIFIAAGWLVPTVYTSV 134
7tmA_NPYR-like cd15203
neuropeptide Y receptors and related proteins, member of the class A family of ...
29-155 1.02e-04

neuropeptide Y receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to Gi or Go proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. Also included in this subgroup is prolactin-releasing peptide (PrRP) receptor (previously known as GPR10), which is activated by its endogenous ligand PrRP, a neuropeptide possessing C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acid residues (PrRP-20) and the other consists of 31 amino acid residues (PrRP-31). PrRP receptor shows significant sequence homology to the NPY receptors, and a micromolar level of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors.


Pssm-ID: 320331 [Multi-domain]  Cd Length: 293  Bit Score: 43.36  E-value: 1.02e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLH-ARPMYILlgVLSFLDMWLSSVIVPriilnFTPA---SKVIAFGGcaa 104
Cdd:cd15203    1 IILILLYGLIIVLGVVGNLLVIYVVLRNKSMQtVTNIFIL--NLAVSDLLLCLVSLP-----FTLIytlTKNWPFGS--- 70
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 282396069 105 qlYFFHFLGSTQC-------FLYTLMAYDRYLAICQPLRYPvlMNGKLCTILVAGAWV 155
Cdd:cd15203   71 --ILCKLVPSLQGvsifvstLTLTAIAIDRYQLIVYPTRPR--MSKRHALLIIALIWI 124
7tmA_mAChR_M2 cd15297
muscarinic acetylcholine receptor subtype M2, member of the class A family of ...
30-155 1.08e-04

muscarinic acetylcholine receptor subtype M2, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of M2 receptor causes a decrease in cAMP production, generally leading to inhibitory-type effects. This causes an outward current of potassium in the heart, resulting in a decreased heart rate. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320424 [Multi-domain]  Cd Length: 262  Bit Score: 43.03  E-value: 1.08e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHARPMYILLG------VLSFLDMWLSSVIvprIILNFTPASKVIafggCA 103
Cdd:cd15297    2 FIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSlacadlIIGVFSMNLYTLY---TVIGYWPLGPVV----CD 74
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 282396069 104 AQLYFFHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWV 155
Cdd:cd15297   75 LWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWV 126
7tmA_5-HT6 cd15054
serotonin receptor subtype 6, member of the class A family of seven-transmembrane G ...
36-154 3.77e-04

serotonin receptor subtype 6, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT6 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the mammalian central nervous system (CNS). 5-HT6 receptors are selectively linked to G proteins of the G(s) family, which positively stimulate adenylate cyclase, causing cAMP formation and activation of protein kinase A. The 5-HT6 receptors mediates excitatory neurotransmission and are involved in learning and memory; thus they are promising targets for the treatment of cognitive impairment. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320182 [Multi-domain]  Cd Length: 267  Bit Score: 41.33  E-value: 3.77e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  36 FLIYILTQLGNLLILLTVWADPKLHARPMYILLGvLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHFLGST 115
Cdd:cd15054    8 CLIILLTVAGNSLLILLIFTQRSLRNTSNYFLVS-LFMSDLMVGLVVMPPAMLNALYGRWVLARDFCPIWYAFDVMCCSA 86
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 282396069 116 QCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAW 154
Cdd:cd15054   87 SILNLCVISLDRYLLIISPLRYKLRMTPPRALALILAAW 125
7tmA_Adenosine_R_A2A cd15068
adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G ...
37-161 3.94e-04

adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2A receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320196 [Multi-domain]  Cd Length: 293  Bit Score: 41.46  E-value: 3.94e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  37 LIYILTQLGNLLILLTVWADPKLHARPMYILLGvLSFLDMWLSSVIVPRIILNFTpaSKVIAFGGCAAQLYFFHFLGSTQ 116
Cdd:cd15068    9 AIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVS-LAAADIAVGVLAIPFAITIST--GFCAACHGCLFIACFVLVLTQSS 85
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 282396069 117 CFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHG 161
Cdd:cd15068   86 IFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIG 130
7tmA_GPR119_R_insulinotropic_receptor cd15104
G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member ...
121-304 4.24e-04

G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR119 is activated by oleoylethanolamide (OEA), a naturally occurring bioactive lipid with hypophagic and anti-obesity effects. Immunohistochemistry and double-immunofluorescence studies revealed the predominant GPR119 localization in pancreatic polypeptide (PP)-cells of islets. In addition, GPR119 expression is elevated in islets of obese hyperglycemic mice as compared to control islets, suggesting a possible involvement of this receptor in the development of obesity and diabetes. GPR119 has a significant sequence similarity with the members of the endothelial differentiation gene family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320232 [Multi-domain]  Cd Length: 283  Bit Score: 41.20  E-value: 4.24e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 121 TLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGSIQatltfrLPYCGPKEVDY-----FFCDI--PAVLRLA 193
Cdd:cd15104   92 AAIAFDRYLALKQPLRYKQIMTGKSAGALIAGLWLYSGLIGFLP------LISPQFQQTSYkgkcsFFAAFhpRVLLVLS 165
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 194 CAdttvnelvTFVDIGVVAASCFMLILLSYANIVHAILKIRTADGRKRAFSTCGSH------LTVV----TVYYVP---C 260
Cdd:cd15104  166 CM--------VFFPALLLFVFCYCDILKIARVHSRAIYKVEHALARQIHPRRTLSDfkaartVAVLigcfLLSWLPfqiT 237
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 282396069 261 IFIYLRAGSKSPFDGAVAV--FYTVVTPLLNPLIYTLRNQEVKSAL 304
Cdd:cd15104  238 GLVQALCDECKLYDVLEDYlwLLGLCNSLLNPWIYAFWQKEVRRAL 283
7tmA_GPR101 cd15215
orphan G protein-coupled receptor 101, member of the class A family of seven-transmembrane G ...
34-155 5.10e-04

orphan G protein-coupled receptor 101, member of the class A family of seven-transmembrane G protein-coupled receptors; Gpr101, an orphan GPCR, is predominantly expressed in the brain within discrete nuclei and is predicted to couple to the stimulatory G(s) protein, a potent activator of adenylate cyclase. GPR101 has been implicated in mediating the actions of GnRH-(1-5), a pentapeptide formed by metallopeptidase cleavage of the decapeptide gonadotropin-releasing hormone (GnRH), which plays a critical role in the regulation of the hypothalamic-pituitary-gonadal axis. GnRH-(1-5) acts on GPR101 to stimulate epidermal growth factor (EFG) release and EFG-receptor (EGFR) phosphorylation, leading to enhanced cell migration and invasion in the Ishikawa endometrial cancer cell line. Furthermore, these effects of GnRH-(1-5) are also dependent on enzymatic activation of matrix metallopeptidase-9 (MMP-9). GPR101 is a member of the class A family of GPCRs, which includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320343 [Multi-domain]  Cd Length: 261  Bit Score: 40.98  E-value: 5.10e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  34 VFFLIYILTQLGNLLILLTVWADPKLHARPMYILLGVLsFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHFLG 113
Cdd:cd15215    5 LIVIFLCASLFGNIVLLLVFQRKPQLLQVANRFIFNLL-VADLLQTVLVMPWVIATSVPLFWPLDSHLCTALVVLMHLFA 83
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 282396069 114 STQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWV 155
Cdd:cd15215   84 FAGVNTIVVVSVDRYLAIIHPLSYPTKMTPRRGYLLIYGTWI 125
7tmA_5-HT1_5_7 cd15064
serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G ...
29-159 7.85e-04

serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes serotonin receptor subtypes 1, 5, and 7 that are activated by the neurotransmitter serotonin. The 5-HT1 and 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family. The 5-HT1 receptor subfamily includes 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as 5-HT2C receptor. The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. The 5-HT7 receptor is coupled to Gs, which positively stimulates adenylate cyclase activity, leading to increased intracellular cAMP formation and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320192 [Multi-domain]  Cd Length: 258  Bit Score: 40.39  E-value: 7.85e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILnfTPASKVIAFGGCAAQLYF 108
Cdd:cd15064    1 VLISVLLSLIILATILGNALVIAAILLTRKLH-TPANYLIASLAVADLLVAVLVMPLSAV--YELTGRWILGQVLCDIWI 77
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 282396069 109 FHFLGSTQCFLYTL--MAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSI 159
Cdd:cd15064   78 SLDVTCCTASILHLcvIALDRYWAITDAVEYAHKRTPKRAAVMIALVWTLSIC 130
7tmA_DmOct-betaAR-like cd15066
Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar ...
33-156 1.38e-03

Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar receptors in bilateria; member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila beta-adrenergic-like octopamine receptors and similar proteins. The biogenic amine octopamine is the invertebrate equivalent of vertebrate adrenergic neurotransmitters and exerts its effects through different G protein-coupled receptor types. Insect octopamine receptors are involved in the modulation of carbohydrate metabolism, muscular tension, cognition and memory. The activation of octopamine receptors mediating these actions leads to an increase in adenylate cyclase activity, thereby increasing cAMP levels. In Drosophila melanogaster, three subgroups have been classified on the basis of their structural homology and functional equivalents with vertebrate beta-adrenergic receptors: DmOctBeta1R, DmOctBeta2R, and DmOctBeta3R.


Pssm-ID: 320194 [Multi-domain]  Cd Length: 265  Bit Score: 39.67  E-value: 1.38e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  33 LVFFLIYILTQLGNLLILLTVWADPKLHARPMYILLGvLSFLDMWLSSVIVPriilnFTpASKVIA----FGGCAAQLY- 107
Cdd:cd15066    4 FAMTLIILAAIFGNLLVIISVMRHRKLRVITNYFVVS-LAMADMLVALCAMT-----FN-ASVEITgrwmFGYFMCDVWn 76
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 282396069 108 FFHFLGSTQCFLY-TLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVA 156
Cdd:cd15066   77 SLDVYFSTASILHlCCISVDRYYAIVQPLEYPSKMTKRRVAIMLANVWIS 126
7tmA_ETH-R cd14997
ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G ...
33-162 1.43e-03

ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the ecdysis-triggering hormone receptors found in insects, which are members of the class A family of seven-transmembrane G-protein coupled receptors. Ecdysis-triggering hormones are vital regulatory signals that govern the stereotypic physiological sequence leading to cuticle shedding in insects. Thus, the ETH signaling system has been a target for the design of more sophisticated insect-selective pest control strategies. Two subtypes of ecdysis-triggering hormone receptor were identified in Drosophila melanogaster. Blood-borne ecdysis-triggering hormone (ETH) activates the behavioral sequence through direct actions on the central nervous system. In insects, ecdysis is thought to be controlled by the interaction between peptide hormones; in particular between ecdysis-triggering hormone (ETH) from the periphery and eclosion hormone (EH) and crustacean cardioactive peptide (CCAP) from the central nervous system. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320128 [Multi-domain]  Cd Length: 294  Bit Score: 39.58  E-value: 1.43e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  33 LVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTpASKVIAFGgcAAQLYFFHFL 112
Cdd:cd14997    5 VVYGVIFVVGVLGNVLVGIVVWKNKDMRT-PTNIFLVNLSVADLLVLLVCMPVALVETW-AREPWLLG--EFMCKLVPFV 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 282396069 113 GSTQCFLYTL----MAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHGS 162
Cdd:cd14997   81 ELTVAHASVLtilaISFERYYAICHPLQAKYVCTKRRALVIIALIWLLALLTSS 134
7tmA_Adenosine_R_A2B cd15069
adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G ...
36-155 1.82e-03

adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2B receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320197 [Multi-domain]  Cd Length: 294  Bit Score: 39.53  E-value: 1.82e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  36 FLIYILTQLGNLLILLTVWADPKLHARPMYILLGvLSFLDMWLSSVIVP---RIILNFTpaskvIAFGGCAAQLYFFHFL 112
Cdd:cd15069    8 LIIAALSVAGNVLVCAAVGTNSTLQTPTNYFLVS-LAAADVAVGLFAIPfaiTISLGFC-----TDFHSCLFLACFVLVL 81
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 282396069 113 GSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWV 155
Cdd:cd15069   82 TQSSIFSLLAVAVDRYLAIKVPLRYKSLVTGKRARGVIAVLWV 124
7tmA_Peropsin cd15073
retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of ...
36-159 1.93e-03

retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of seven-transmembrane G protein-coupled receptors; Peropsin, also known as a retinal pigment epithelium-derived rhodopsin homolog (RRH), is a visual pigment-like protein found exclusively in the apical microvilli of the retinal pigment epithelium. Peropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Peropsin presumably plays a physiological role in the retinal pigment epithelium either by detecting light directly or monitoring the levels of retinoids, the primary light absorber in visual perception, or other pigment-related compounds in the eye.


Pssm-ID: 320201 [Multi-domain]  Cd Length: 280  Bit Score: 39.33  E-value: 1.93e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  36 FLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPriilnFTPASKVIA---FGGCAAQLYFFH-- 110
Cdd:cd15073    8 IVAGIISTISNGIVLVTFVKFRELRT-PTNALIINLAVTDLGVSIIGYP-----FSAASDLHGswkFGYAGCQWYAFLni 81
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVlMNGKLCTILVAGAWVAGSI 159
Cdd:cd15073   82 FFGMASIGLLTVVAVDRYLTICRPDLGRK-MTTNTYTVMILLAWTNAFF 129
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
32-136 2.04e-03

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 39.18  E-value: 2.04e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  32 FLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHF 111
Cdd:cd15001    3 IIVYVITFVLGLIGNSLVIFVVARFRRMRS-VTNVFLASLATADLLLLVFCVPLKTAEYFSPTWSLGAFLCKAVAYLQLL 81
                         90       100
                 ....*....|....*....|....*
gi 282396069 112 LGSTQCFLYTLMAYDRYLAICQPLR 136
Cdd:cd15001   82 SFICSVLTLTAISIERYYVILHPMK 106
7tmA_MCR cd15103
melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
34-161 2.06e-03

melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320231 [Multi-domain]  Cd Length: 270  Bit Score: 39.01  E-value: 2.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  34 VFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDM-------WLSSVIVPRIILNFTPASKVIAFGGCAAQL 106
Cdd:cd15103    6 VFLTLGIVSLLENILVILAIAKNKNLHS-PMYFFICSLAVADMlvsvsnaLETIVIILLNNGYLVPRDSFEQHIDNVIDS 84
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 282396069 107 YFFHFLGSTQCFLYTLmAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIHG 161
Cdd:cd15103   85 MICSSLLASICSLLAI-AVDRYITIFYALRYHSIMTVRRAGVIITAIWVFCTVCG 138
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
34-155 2.13e-03

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 39.11  E-value: 2.13e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  34 VFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHFLG 113
Cdd:cd14969    6 YLSLIGVLGVVLNGLVIIVFLKKKKLR-TPLNLFLLNLALADLLMSVVGYPLSFYSNLSGRWSFGDPGCVIYGFAVTFLG 84
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 282396069 114 STQCFLYTLMAYDRYLAICQPLRYpVLMNGKLCTILVAGAWV 155
Cdd:cd14969   85 LVSISTLAALAFERYLVIVRPLKA-FRLSKRRALILIAFIWL 125
7tmA_SREB3_GPR173 cd15217
super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of ...
37-154 2.29e-03

super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320345 [Multi-domain]  Cd Length: 329  Bit Score: 39.16  E-value: 2.29e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  37 LIYILTQLGNLLILLTVWADPKLHARPMYILLGvLSFLDMWLSSVIVPRIILNFTPAS---------KVIAFggcAAQLY 107
Cdd:cd15217    9 LIICVSLAGNLIVSLLVLKDRALHKAPYYFLLD-LCLADTIRSAVCFPFVLVSIRNGSawtysvlscKIVAF---MAVLF 84
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 282396069 108 FFHflgstQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAW 154
Cdd:cd15217   85 CFH-----AAFMLFCISVTRYMAIAHHRFYSKRMTFWTCIAVICMVW 126
7tmA_OXR cd15208
orexin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
31-137 2.65e-03

orexin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Orexins (OXs, also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. Thus, activation of OX1R or OX2R will activate phospholipase activity and the phosphatidylinositol and calcium signaling pathways. Additionally, OX2R activation can also lead to inhibition of adenylate cyclase.


Pssm-ID: 320336 [Multi-domain]  Cd Length: 303  Bit Score: 38.91  E-value: 2.65e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHARPMYILLGvLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15208    3 LIALYILVFIVGLVGNVLVCFAVWRNHHMRTVTNYFIVN-LSLADFLVIIICLPATLLVDVTETWFFGQVLCKIIPYLQT 81
                         90       100
                 ....*....|....*....|....*..
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRY 137
Cdd:cd15208   82 VSVSVSVLTLSCIALDRWYAICHPLMF 108
7tmA_S1PR1_Edg1 cd15346
sphingosine-1-phosphate receptor subtype 1 (S1PR1 or S1P1), also called endothelial ...
33-163 2.75e-03

sphingosine-1-phosphate receptor subtype 1 (S1PR1 or S1P1), also called endothelial differentiation gene 1 (Edg1), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320468 [Multi-domain]  Cd Length: 277  Bit Score: 38.70  E-value: 2.75e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  33 LVFFLIYILTQLGNLLILLTVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILN------FTPASKVIAFGGCAAQL 106
Cdd:cd15346    5 VVFIIICCFIILENIFVLLTIWKTKKFH-RPMYYFIGNLALSDLLAGVAYTANLLLSgattykLTPTQWFLREGSMFVAL 83
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 282396069 107 yffhflgSTQCFLYTLMAYDRYLAIcqpLRYPVLMNGKLCT--ILVAGAWVAGSIHGSI 163
Cdd:cd15346   84 -------SASVFSLLAIAIERYITM---LKMKLHNGSNSFRsfLLISACWVISLILGGL 132
7tmA_5-HT2 cd15052
serotonin receptor subtype 2, member of the class A family of seven-transmembrane G ...
33-303 3.02e-03

serotonin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320180 [Multi-domain]  Cd Length: 262  Bit Score: 38.45  E-value: 3.02e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  33 LVFFLIYILTQLGNLLILLTVWADPKLHARPMYILLGvLSFLDMWLSSVIVPRIILN-FTPASKVIAFGGCAAQLYFFHF 111
Cdd:cd15052    5 LLLLLLVIATIGGNILVCLAISLEKRLQNVTNYFLMS-LAIADLLVGLLVMPLSILTeLFGGVWPLPLVLCLLWVTLDVL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 112 LGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVagsihgsiqATLTFRLPYCgpkeVDYFFCDIPAVLR 191
Cdd:cd15052   84 FCTASIMHLCTISLDRYMAIRYPLRTRRNKSRTTVFLKIAIVWL---------ISIGISSPIP----VLGIIDTTNVLNN 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 192 LACADTTVNelvtFVDIGVVAASCFMLILLsyanIVHAILKIRTADGRKRAFSTCGSHLTVVTVYYVPCIFIYLRAG--- 268
Cdd:cd15052  151 GTCVLFNPN----FVIYGSIVAFFIPLLIM----VVTYALTIRLLSNEQKASKVLGIVFAVFVICWCPFFITNILTGlce 222
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 282396069 269 ----SKSPFDGAVAVFYTVVTPLLNPLIYTLRNQEVKSA 303
Cdd:cd15052  223 ecncRISPWLLSVFVWLGYVSSTINPIIYTIFNKTFRRA 261
7tmA_Opsin_Gq_invertebrates cd15337
invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled ...
37-155 3.15e-03

invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The invertebrate Gq-coupled opsin subfamily includes the arthropod and mollusc visual opsins. Like the vertebrate visual opsins, arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. The invertebrate Gq opsins are closely related to the vertebrate melanopsins, the primary photoreceptor molecules for non-visual responses to light, and the R1-R6 photoreceptors, which are the fly equivalent to the vertebrate rods. The Gq opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320459 [Multi-domain]  Cd Length: 292  Bit Score: 38.84  E-value: 3.15e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  37 LIYILTQLGNLLILlTVWADPKLHARPMYILLGVLSFLDMWLSSVI-VPriILNFTPASKVIAFGGCAAQLYffHFLGST 115
Cdd:cd15337    9 IVGILGVIGNLLVI-YLFSKTKSLRTPSNMFIINLAISDFGFSAVNgFP--LKTISSFNKKWIWGKVACELY--GFAGGI 83
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 282396069 116 QCFL----YTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWV 155
Cdd:cd15337   84 FGFMsittLAAISIDRYLVIAKPLEAMKKMTFKRAFIMIIIIWL 127
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
33-234 3.66e-03

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 38.38  E-value: 3.66e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  33 LVFFLIYILTQLGNLLILLtVWADPKLHaRPMYILLGVLSFLDMWLSSVIVPRIILNFTPA-SKVIAFGGCAAQLYFFHF 111
Cdd:cd14978    5 YVLPVICIFGIIGNILNLV-VLTRKSMR-SSTNVYLAALAVSDILVLLSALPLFLLPYIADySSSFLSYFYAYFLPYIYP 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 112 LG----STQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSIhgsiqatltFRLPYCGPKEVDYFFCDIP 187
Cdd:cd14978   83 LAntfqTASVWLTVALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLL---------LNLPRFFEYEVVECENCNN 153
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 282396069 188 AVLRLACADTTVNELVTFVDIGVVAASCFM----LILLSYAN--IVHAILKIR 234
Cdd:cd14978  154 NSYYYVIPTLLRQNETYLLKYYFWLYAIFVvllpFILLLILNilLIRALRKSK 206
7tmA_TAAR2_3_4 cd15312
trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family ...
31-154 4.33e-03

trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; TAAR2, TAAR3, and TAAR4 are among the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320437 [Multi-domain]  Cd Length: 289  Bit Score: 38.10  E-value: 4.33e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15312    3 MYLFMAGAILLTVFGNLMVIISISHFKQLHS-PTNFLILSLAITDFLLGFLVMPYSMVRSVESCWYFGDLFCKIHSSLDM 81
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAW 154
Cdd:cd15312   82 MLSTTSIFHLCFIAVDRYYAVCDPLHYRTKITTPVIKVFLVISW 125
7tmA_5-HT4 cd15056
serotonin receptor subtype 4, member of the class A family of seven-transmembrane G ...
31-155 4.69e-03

serotonin receptor subtype 4, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT4 subtype is a member of the serotonin receptor family that belongs to the class A G protein-coupled receptors, and binds the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the mammalian central nervous system (CNS). 5-HT4 receptors are selectively linked to G proteins of the G(s) family, which positively stimulate adenylate cyclase, causing cAMP formation and activation of protein kinase A. 5-HT4 receptor-specific agonists have been shown to enhance learning and memory in animal studies. Moreover, hippocampal 5-HT4 receptor expression has been reported to be inversely correlated with memory performance in humans. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320184 [Multi-domain]  Cd Length: 294  Bit Score: 38.24  E-value: 4.69e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  31 LFLVFFLIYILTQLGNLLILLTVWADPKLHARPMYILLGvLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFH 110
Cdd:cd15056    3 LSTFLSLVILLTILGNLLVIVAVCTDRQLRKKTNYFVVS-LAVADLLVAVLVMPFGAIELVNNRWIYGETFCLVRTSLDV 81
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 282396069 111 FLGSTQCFLYTLMAYDRYLAIC-QPLRYPvlMNGKLCTILVAGAWV 155
Cdd:cd15056   82 LLTTASIMHLCCIALDRYYAICcQPLVYK--MTPLRVAVMLGGCWV 125
7tmA_NTSR cd15130
neurotensin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
34-156 5.74e-03

neurotensin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Neurotensin (NTS) is a 13 amino-acid neuropeptide that functions as both a neurotransmitter and a hormone in the nervous system and peripheral tissues, respectively. NTS exerts various biological activities through activation of the G protein-coupled neurotensin receptors, NTSR1 and NTSR2. In the brain, NTS is involved in the modulation of dopamine neurotransmission, opioid-independent analgesia, hypothermia, and the inhibition of food intake, while in the periphery NTS promotes the growth of various normal and cancer cells and acts as a paracrine and endocrine modulator of the digestive tract. The third neurotensin receptor, NTSR3 or also called sortilin, is not a G protein-coupled receptor.


Pssm-ID: 320258 [Multi-domain]  Cd Length: 281  Bit Score: 38.00  E-value: 5.74e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  34 VFFLIYILTQLGNLLILLTVWADPKLHARP--MYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFG--GCAAqLYFF 109
Cdd:cd15130    6 IYLALFVVGTVGNSVTLFTLARKKSLQSLQstVRYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGdaGCRG-YYFL 84
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 282396069 110 HFLGSTQCFLYTL-MAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVA 156
Cdd:cd15130   85 RDACTYATALNVAsLSVERYLAICHPFKAKTLMSRSRTKKFISAIWLA 132
7tmA_CCK_R cd15206
cholecystokinin receptors, member of the class A family of seven-transmembrane G ...
37-159 5.75e-03

cholecystokinin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320334 [Multi-domain]  Cd Length: 269  Bit Score: 37.76  E-value: 5.75e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  37 LIYILTQLGNLLILLTVWADPKLHARPMYILLGvLSFLDMWLSSV-----IVPRIILNFTPASKViafggCAAQLYFFHF 111
Cdd:cd15206    9 VIFLLAVVGNILVIVTLVQNKRMRTVTNVFLLN-LAVSDLLLAVFcmpftLVGQLLRNFIFGEVM-----CKLIPYFQAV 82
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 282396069 112 LGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVAGSI 159
Cdd:cd15206   83 SVSVSTFTLVAISLERYFAICHPLKSRVWQTLSHAYKVIAGIWLLSFL 130
7tmA_MC2R_ACTH_R cd15350
melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of ...
34-155 5.96e-03

melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320472 [Multi-domain]  Cd Length: 270  Bit Score: 37.84  E-value: 5.96e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  34 VFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLS-SVIVPRIILNFTPASKVIAFGGCAAQ------- 105
Cdd:cd15350    6 VFFTIAAVGLLENLLVLVAVIKNKNLHS-PMYFFICSLAVSDMLGSlYKTLENILIILADMGYLNRRGPFETKlddimds 84
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 282396069 106 LYFFHFLGSTqcFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWV 155
Cdd:cd15350   85 LFCLSLLGSI--FSILAIAADRYITIFHALRYHNIMTMRRTLVILAIIWT 132
7tmA_GPR161 cd15214
orphan G protein-coupled receptor 161, member of the class A family of seven-transmembrane G ...
32-155 6.32e-03

orphan G protein-coupled receptor 161, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR161, an orphan GPCR, is a negative regulator of Sonic hedgehog (Shh) signaling, which promotes the processing of zinc finger protein GLI3 into its transcriptional repressor form (GLI3R) during neural tube development. In the absence of Shh, this proteolytic processing is normally mediated by cAMP-dependent protein kinase A (PKA). GPR161 is recruited to primary cilia by a mechanism depends on TULP3 (tubby-related protein 3) and the intraflagellar complex A (IFT-A). Moreover, Gpr161 knockout mice show phenotypes observed in Tulp3/IFT-A mutants, and cause increased Shh signaling in the neural tube. Taken together, GPR161 negatively regulates the PKA-dependent GLI3 processing in the absence of Shh signal by coupling to G(s) protein, which causes activation of adenylate cyclase, elevated cAMP levels, and activation of PKA. Conversely, in the presence of Shh, GPR161 is removed from the cilia by internalization into the endosomal recycling compartment, leading to downregulation of its activity and thereby allowing Shh signaling to proceed. In addition, GPR161 is over-expressed in triple-negative breast cancer (lacking estrogen receptor, progesterone receptor, and human epidermal growth factor receptor 2 (HER2) expression) and correlates with poor prognosis. Mutations of GPR161 have also been implicated as a novel cause for pituitary stalk interruption syndrome (PSIS), a rare congenital disease of the pituitary gland. GPR161 is a member of the class A family of GPCRs, which contains receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320342 [Multi-domain]  Cd Length: 261  Bit Score: 37.61  E-value: 6.32e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  32 FLVFFLIYILTQLGNLLILLTVWADPKLHArPMYILLGVLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYFFHF 111
Cdd:cd15214    3 SIAIIIIAILICLGNLVIVVTLYKKSYLLT-LSNKFVFSLTLSNLLLSVLVLPFVVTSSIRREWIFGVVWCNFSALLYLL 81
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 282396069 112 LGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWV 155
Cdd:cd15214   82 ISSASMLTLGAIAIDRYYAVLYPMVYPMKITGNRAVLALVYIWL 125
7tmA_D2-like_dopamine_R cd15053
D2-like dopamine receptors, member of the class A family of seven-transmembrane G ...
33-303 7.09e-03

D2-like dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320181 [Multi-domain]  Cd Length: 263  Bit Score: 37.33  E-value: 7.09e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  33 LVFFLIYILTQLGNLLILLTVWADPKLHARPMYILLGvLSFLDMWLSSVIVPRiilnftpASKVIAFGGcaaqlyfFHFL 112
Cdd:cd15053    5 LFLLLLPLLTVFGNVLVIMSVFRERSLQTATNYFIVS-LAVADLLVAILVMPF-------AVYVEVNGG-------KWYL 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 113 GSTQCFLYTLM---------------AYDRYLAICQPLRYPVLMNGKLCTILVAGAWVagsIHGSIQATLTFRLPYCGPK 177
Cdd:cd15053   70 GPILCDIYIAMdvmcstasifnlcaiSIDRYIAVTQPIKYARQKNSKRVLLTIAIVWV---VSAAIACPLLFGLNNVPYR 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069 178 EvdyffcdiPAVLRLACADTTV-NELVTFVdigvvaASCFMLILLsYANIVHAILKirtadgRKRAFSTCGSHLTVVTVY 256
Cdd:cd15053  147 D--------PEECRFYNPDFIIySSISSFY------IPCIVMLLL-YYRIFRALRR------EKKATKTLAIVLGVFLFC 205
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 282396069 257 YVP----------CIFIYLRAGSKSPFDGAVAVFYTVVTPLLNPLIYTLRNQEVKSA 303
Cdd:cd15053  206 WLPfftlnilnaiCPKLQNQSCHVGPALFSLTTWLGYVNSFLNPIIYTIFNIEFRKA 262
7tmA_Histamine_H4R cd15295
histamine receptor subtype H4R, member of the class A family of seven-transmembrane G ...
29-161 7.85e-03

histamine receptor subtype H4R, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine subtype H4R, a member of the histamine receptor family, which belong to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). The H3 and H4 receptors couple to the G(i)-proteins, which leading to the inhibition of cAMP formation. The H3R receptor functions as a presynaptic autoreceptors controlling histamine release and synthesis. The H4R plays an important role in histamine-mediated chemotaxis in mast cells and eosinophils. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320422 [Multi-domain]  Cd Length: 267  Bit Score: 37.50  E-value: 7.85e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  29 AFLFLVFFLIYILTQLGNLLILLTVWADPKLHARPMYILLGvLSFLDMWLSSVIVPRIILNFTPASKVIAFGGCAAQLYF 108
Cdd:cd15295    1 VVLLFLMSLLALVIVLGNALVIIAFVVDKNLRHRSNYFFLN-LAISDFFVGAISIPLYIPYTLTNRWDFGRGLCVFWLVI 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 282396069 109 FHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCT-ILVAGAWV-AGSIHG 161
Cdd:cd15295   80 DYLLCTASVYNIVLISYDRYQSVSNAVSYRNQQTATLRIvTQMVAVWVlAFLVHG 134
7tmA_mAChR_M4 cd15298
muscarinic acetylcholine receptor subtype M4, member of the class A family of ...
30-155 9.42e-03

muscarinic acetylcholine receptor subtype M4, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to G(i/o) types of G proteins. The M4 receptor is mainly found in the CNS and function as an inhibitory autoreceptor regulating acetycholine release. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341344 [Multi-domain]  Cd Length: 262  Bit Score: 36.92  E-value: 9.42e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  30 FLFLVFFLIYILTQLGNLLILLTVWADPKLHARPMYILLG------VLSFLDMWLSSVIvprIILNFTPASKVIafggCA 103
Cdd:cd15298    2 FIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSlacadlIIGAFSMNLYTVY---IIKGYWPLGAVV----CD 74
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 282396069 104 AQLYFFHFLGSTQCFLYTLMAYDRYLAICQPLRYPVLMNGKLCTILVAGAWV 155
Cdd:cd15298   75 LWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAGLMIAAAWV 126
7tmA_NTSR2 cd15356
neurotensin receptor subtype 2, member of the class A family of seven-transmembrane G ...
34-156 9.79e-03

neurotensin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Neurotensin (NTS) is a 13 amino-acid neuropeptide that functions as both a neurotransmitter and a hormone in the nervous system and peripheral tissues, respectively. NTS exerts various biological activities through activation of the G protein-coupled neurotensin receptors, NTSR1 and NTSR2. In the brain, NTS is involved in the modulation of dopamine neurotransmission, opioid-independent analgesia, hypothermia, and the inhibition of food intake, while in the periphery NTS promotes the growth of various normal and cancer cells and acts as a paracrine and endocrine modulator of the digestive tract. The third neurotensin receptor, NTSR3 or also called sortilin, is not a G protein-coupled receptor.


Pssm-ID: 320478 [Multi-domain]  Cd Length: 285  Bit Score: 37.15  E-value: 9.79e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282396069  34 VFFLIYILTQLGNLLILLTVWADPKLH---ARPMYILLGvLSFLDMWLSSVIVPRIILNFTPASKVIAFG--GCAAqLYF 108
Cdd:cd15356    6 VYALIWALGAAGNALTIHLVLKKRSLRglqGTVHYHLVS-LALSDLLILLISVPIELYNFVWFHYPWVFGdlVCRG-YYF 83
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 282396069 109 FHFLGSTQCFLYTL-MAYDRYLAICQPLRYPVLMNGKLCTILVAGAWVA 156
Cdd:cd15356   84 VRDICSYATVLNIAsLSAERYLAICQPLRAKRLLSKRRTKWLLALIWAS 132
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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