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Conserved domains on  [gi|282847416|ref|NP_666670|]
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olfactory receptor 1215 [Mus musculus]

Protein Classification

olfactory receptor family 4A protein( domain architecture ID 11610412)

olfactory receptor family 4A protein is an odorant receptor belonging to the G-protein coupled receptor 1 family

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
23-290 4.20e-149

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


:

Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 419.31  E-value: 4.20e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  23 KLLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFS 102
Cdd:cd15939    1 KICFVVFLLIYLATVLGNLLIVVTIKASQ-TLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 103 VHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFP 182
Cdd:cd15939   80 EHFFGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 183 LLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFSLRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15939  160 LLKLACTDTYVIGLLVVANSGLICLLSFLILLISYIVILYSLRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVT 239
                        250       260
                 ....*....|....*....|....*...
gi 282847416 263 PFSLEKNVFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15939  240 TFPIDKVVAVFYTIITPMLNPLIYTLRN 267
 
Name Accession Description Interval E-value
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
23-290 4.20e-149

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 419.31  E-value: 4.20e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  23 KLLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFS 102
Cdd:cd15939    1 KICFVVFLLIYLATVLGNLLIVVTIKASQ-TLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 103 VHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFP 182
Cdd:cd15939   80 EHFFGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 183 LLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFSLRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15939  160 LLKLACTDTYVIGLLVVANSGLICLLSFLILLISYIVILYSLRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVT 239
                        250       260
                 ....*....|....*....|....*...
gi 282847416 263 PFSLEKNVFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15939  240 TFPIDKVVAVFYTIITPMLNPLIYTLRN 267
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
29-300 1.28e-39

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 140.33  E-value: 1.28e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416   29 FLLLYLATIGGNMTIVVTIASSpVLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVHFFSA 108
Cdd:pfam13853   1 FCLMYLIIFLGNGTILFVIKTE-SSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  109 VEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLLKLAC 188
Cdd:pfam13853  80 MESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSC 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  189 TDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILI-----YARPTS 262
Cdd:pfam13853 160 ADIKVNNIYGLFVVTSTFGIDSLLIVLSYGLILRTvLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLsmvhrFGHNVP 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 282847416  263 PF--SLEKNVFIFadvLTPLLNPVVYTFRNKEMKNAIRKM 300
Cdd:pfam13853 240 PLlqIMMANAYLF---FPPVLNPIVYSVKTKQIRDCVKRM 276
 
Name Accession Description Interval E-value
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
23-290 4.20e-149

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 419.31  E-value: 4.20e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  23 KLLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFS 102
Cdd:cd15939    1 KICFVVFLLIYLATVLGNLLIVVTIKASQ-TLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 103 VHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFP 182
Cdd:cd15939   80 EHFFGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 183 LLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFSLRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15939  160 LLKLACTDTYVIGLLVVANSGLICLLSFLILLISYIVILYSLRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVT 239
                        250       260
                 ....*....|....*....|....*...
gi 282847416 263 PFSLEKNVFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15939  240 TFPIDKVVAVFYTIITPMLNPLIYTLRN 267
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
24-290 1.90e-121

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 349.19  E-value: 1.90e-121
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15226    2 FLFVFFSLFYVATVLGNLLIVVTVTSDP-HLHSPMYFLLANLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15226   81 HFFGGSEMVLLIAMAFDRYVAICKPLHYLTIMSPRMCILLVVASWIIGFIHSLSQLAFVVNLPFCGPNVVDSFFCDLPLV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFSLRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSP 263
Cdd:cd15226  161 IKLACTDTYVLELMVVANSGLISLVCFLLLLISYIVILVTVRKHSSGGSSKALSTCSAHITVVVLFFGPCIFIYVWPFST 240
                        250       260
                 ....*....|....*....|....*..
gi 282847416 264 FSLEKNVFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15226  241 FPVDKFLAVFYTVITPLLNPIIYTLRN 267
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
24-290 5.25e-108

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 315.19  E-value: 5.25e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd13954    2 LLFVLFLLIYLLTLLGNLLIILLVRLDS-RLHTPMYFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd13954   81 FSLGGTECFLLAVMAYDRYVAICHPLHYPTIMNKRVCILLAAGSWLIGFLNSLIHTVLISQLPFCGSNVINHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd13954  161 LKLSCSDTSLNELVIFILAGFVGLGSFLLTLVSYIYIISTiLKIPSAEGRQKAFSTCASHLTVVSLFYGTIIFMYVRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 282847416 263 PFSLEKNVF--IFADVLTPLLNPVVYTFRN 290
Cdd:cd13954  241 SYSSDLDKVvsVFYTVVTPMLNPIIYSLRN 270
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
24-297 4.49e-107

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 312.85  E-value: 4.49e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15225    2 LLFVVFLLIYLVTLLGNLLIILITKVDPAL-HTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15225   81 LFLGGTECFLLAAMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSNEINHFFCDIPPV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFAnsGSICIIIFSFLL--VSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARP 260
Cdd:cd15225  161 LKLACADTSLNEIAIFV--ASVLVILVPFLLilVSYIFIISTiLKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRP 238
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 282847416 261 TSPFSLEKNVFI--FADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15225  239 KSSYSPETDKLLslFYTVVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
24-290 3.65e-106

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 310.42  E-value: 3.65e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15936    2 FLFLVFLLVYLTTWLGNLLIIITVISDP-HLHTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15936   81 HFTGGAEVFLLSVMAYDRYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSIVQVALLLQLPFCGPNVLDNFYCDVPQV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFSLRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSP 263
Cdd:cd15936  161 IKLACTDTFLLELLMVSNSGLVTLLIFFILLISYTVILVKIRTHVTEGKRKALSTCASQITVVTLIFVPCIYIYARPFQT 240
                        250       260
                 ....*....|....*....|....*..
gi 282847416 264 FSLEKNVFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15936  241 FPMDKAVSVLYTVITPMLNPMIYTLRN 267
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
24-290 7.82e-105

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 307.13  E-value: 7.82e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15230    2 PLFVLFLLIYLITLVGNLGMIVLIRIDS-RLHTPMYFFLSNLSFVDICYSSVITPKMLVNFLSEKKTISFAGCAAQFFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15230   81 AVFGTTECFLLAAMAYDRYVAICNPLLYTVIMSKRVCIQLVAGSYLCGFVNSIVHTSSTFSLSFCGSNVINHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15230  161 LKLSCSDTHINELVLFAFSGFIGLSTLLIILISYLYILITiLRIRSAEGRRKAFSTCASHLTAVSLFYGTLIFMYLRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 282847416 263 PFSLEKN--VFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15230  241 SYSLDQDkvVSVFYTVVIPMLNPLIYSLRN 270
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
24-290 6.16e-99

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 292.04  E-value: 6.16e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15940    2 AFFMLFLVLYLLTLSGNILIMITIVMDP-RLHTPMYFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15940   81 HLFACTEIFLLTIMAYDRYVAICNPLHYPTVMNHKVCLWLVAALWLGGTVHSLAQTFLTIRLPYCGPNEIDSFFCDVPPV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFSLRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSP 263
Cdd:cd15940  161 IKLACTDTYLIDILIVSNSGLISLVCFVALLGSYIVILVSLRKRSTEGRRKALSTCASHLTVVTLFFGPCIFIYTRPSTS 240
                        250       260
                 ....*....|....*....|....*..
gi 282847416 264 FSLEKNVFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15940  241 FSEDKVVSVFYTVVTPLLNPIIYTLRN 267
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
9-299 7.53e-99

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 292.73  E-value: 7.53e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416   9 EFVLLGLSQNPKVEKLLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKR 88
Cdd:cd15943    1 EFILLGLTDNPELQVILFAVFLVIYLITLVGNLGMIVLIRLDS-RLHTPMYFFLSHLSFLDLCYSSAITPKMLVNFLAEN 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  89 KTISFECCMTQVFSVHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFC 168
Cdd:cd15943   80 KTISFTGCAAQMYFFVAFATTECFLLAVMAYDRYVAICNPLLYTVIMSPRVCIQLVAGSYLIGFVNALIQTICTFRLPFC 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 169 GPNFIDHFICDLFPLLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVV 247
Cdd:cd15943  160 GSNVINHFFCDVPPLLKLSCSDTHVNEIVLFAFAIFLGIFTSLEILVSYVYILSAiLRIHSSEGRRKAFSTCASHLMAVT 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 282847416 248 LFFVPCILIYARPTSPFSLEKN--VFIFADVLTPLLNPVVYTFRNKEMKNAIRK 299
Cdd:cd15943  240 IFYGTTLFMYLRPSSSYSLDQDkvVSVFYTVVIPMLNPLIYSLRNKEVKDALRR 293
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
24-297 9.53e-98

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 289.11  E-value: 9.53e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15229    2 FLFLVFLVIYLLTLLGNLLIMLVIRADS-HLHTPMYFFLSHLSFLDICYSSVTVPKMLENLLSERKTISVEGCIAQIFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15229   81 FFFAGTEAFLLSAMAYDRYAAICHPLHYVQIMSKQVCVQLVGGAWALGFLYALINTLLLLNLHFCGPNEINHFSCELPSL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPT- 261
Cdd:cd15229  161 LPLSCSDTFANKMVLLTSSVIFGLGSFLLTLVSYIHIISTiLRIRSAEGRSKAFSTCSSHLTVVGLFYGTGFFRYLRPNs 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 282847416 262 -SPFSLEKNVFIFADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15229  241 aSSSVLDRVFSIQYSILTPMLNPIIYSLKNKEVKAAL 277
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
24-297 1.32e-97

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 288.78  E-value: 1.32e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15231    2 LLFLIFLIIYLVTLLGNLLIITLVLLDSHL-HTPMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15231   81 VSFVGTECLLLAVMAYDRYVAICNPLHYAVIMSRKVCLQLAAASWLCGFLNSAVHTVLTFRLSFCGSNQISHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15231  161 LKLSCSDTSLNEVLLLVASVFIGLTPFLFIVISYVYIISTiLKIRSAEGRRKAFSTCASHLTVVTLFYGTAIFNYNRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 282847416 263 PFSLEKNVFI--FADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15231  241 GYSLDKDTLIsvLYSIVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
10-294 1.75e-97

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 288.84  E-value: 1.75e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  10 FVLLGLSQNPKVEKLLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRK 89
Cdd:cd15408    1 FILLGFTDQPELQVLLFVVFLLIYVITLVGNLGMILLIRLDSRL-HTPMYFFLSHLSFLDICYSSTITPKTLLNLLAERK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  90 TISFECCMTQVFSVHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCG 169
Cdd:cd15408   80 VISFTGCLTQLYFYAVFATTECYLLAAMAYDRYVAICNPLLYTVIMSQRVCVSLVAGSYLAGFLNSTVHTGFILRLSFCG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 170 PNFIDHFICDLFPLLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVL 248
Cdd:cd15408  160 SNVINHFFCDGPPLLALSCSDTSLNEMLLFAFVGFNVLTTTLVILISYTYILATiLRMRSAEGRHKAFSTCASHLTAVTL 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 282847416 249 FFVPCILIYARPTSPFSLE--KNVFIFADVLTPLLNPVVYTFRNKEMK 294
Cdd:cd15408  240 FYGSLAFMYLRPSSRYSLDldKVASVFYTVVIPMLNPLIYSLRNKEVK 287
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
22-297 9.21e-96

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 284.11  E-value: 9.21e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  22 EKLLFVIFLLLYLATIGGNMTIVVTIASSPVLLgSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVF 101
Cdd:cd15235    1 QPLLFLLFLAMYLLTLLGNLLIVLLIRSDPRLH-TPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 102 SVHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLF 181
Cdd:cd15235   80 FFIAFGNTDSFLLAVMAYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSFCGSNEIPHFFCDLQ 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 182 PLLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARP 260
Cdd:cd15235  160 PLLKLSCSDTSLNELLIFTEGAVVVLGPFLLIVLSYARILAAvLKVPSAAGRRKAFSTCGSHLTVVALFYGTIIGVYFQP 239
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 282847416 261 TSPFSLEKNVF--IFADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15235  240 SSSYSADKDRVatVMYTVVTPMLNPFIYSLRNKDVKGAL 278
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
24-290 1.43e-94

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 280.99  E-value: 1.43e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15938    2 LLFALFLLAYTMVLVGNLLIMVTVRSDP-KLSSPMYFLLGNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15938   81 HFVGAAEMFLLTVMAYDRYVAICKPLHYTTIMSRRLCWVLVAASWAGGFLHSIVQTLLTIQLPFCGPNQVNNFFCDVPPV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFSLRthSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSP 263
Cdd:cd15938  161 IKLACTDTCVTELLMVSNSGLISTVCFVVLVTSYTTILVTIR--STEGRRKALSTCASHLMVVTLFFGPCIFIYARPFST 238
                        250       260
                 ....*....|....*....|....*..
gi 282847416 264 FSLEKNVFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15938  239 FPVDKHVSVLYNVITPMLNPLIYTLRN 265
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
24-290 3.97e-94

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 279.75  E-value: 3.97e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15912    2 LLFLLLLLTYLLTLLGNLLIITITLVDH-RLHTPMYFFLRNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSFFY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15912   81 FFLGTTEFFLLAVMSFDRYVAICNPLHYPTIMNSRVCLQLVLGSWVGGFLLILPPTILVFQLPFCGPNVINHFFCDSGPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFAnsGSICIIIFSFLL--VSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARP 260
Cdd:cd15912  161 LKLSCSDTRLIELLDFI--LASVVLLGSLLLtiVSYIYIISTiLRIPSASGRQKAFSTCASHLTVVSIFYGSCIFMYVRP 238
                        250       260       270
                 ....*....|....*....|....*....|..
gi 282847416 261 T--SPFSLEKNVFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15912  239 SqsSSLDLNKVVALLNTVVTPLLNPFIYTLRN 270
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
10-300 1.52e-93

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 279.16  E-value: 1.52e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  10 FVLLGLSQNPKVEKLLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRK 89
Cdd:cd15410    1 FILLGFTDYPELQVPLFLVFLAIYGITLLGNLGMIVLIKIDPKL-HTPMYFFLSHLSFVDFCYSSVIAPKMLVNFLAEDK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  90 TISFECCMTQVFSVHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCG 169
Cdd:cd15410   80 AISYSGCMLQFFFFCTFVVTESFLLAVMAYDRYVAICNPLLYTVIMSRKLCVLLVAGSYLWGIVCSLIHTCGLLRLSFCG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 170 PNFIDHFICDLFPLLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVL 248
Cdd:cd15410  160 SNVINHFFCDLPPLLSLSCSDTYLNELLLFIFGSLNEASTLLIILTSYVFIIVTiLRIRSAEGRQKAFSTCASHLTAITI 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 282847416 249 FFVPCILIYARPTSPFSL--EKNVFIFADVLTPLLNPVVYTFRNKEMKNAIRKM 300
Cdd:cd15410  240 FHGTILFMYCRPSSSYSLdtDKVASVFYTVVIPMLNPLIYSLRNKDVKDALRKL 293
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
24-290 3.87e-93

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 277.39  E-value: 3.87e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15937    2 LLFVLFLLFYLIILPGNILIILTIQGDPQL-GSPMYFFLANLALLDICYSSITPPKMLADFFSERKTISYGGCMAQLFFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15937   81 HFLGAAEMFLLVAMAYDRYVAICKPLHYTTVVNRRVCCVLVGASWAGGFIHSIIQVALIIRLPFCGPNVLDNFFCDITQV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFSLRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSP 263
Cdd:cd15937  161 IKLACTNTYTVELLMFSNSGLVILLCFLLLLISYAFLLAKLRTHSSKGKSKAASTCITHIIIVFVMFGPAIYIYARPFRS 240
                        250       260
                 ....*....|....*....|....*..
gi 282847416 264 FSLEKNVFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15937  241 FPMDKVVAVFHTVIFPLLNPMIYTLRN 267
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
24-290 4.77e-93

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 277.03  E-value: 4.77e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15935    2 LLFVLVLACYAAILLGNLLIVVTVHADPHLLQSPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15935   82 HFLGGSEMLLLTLMAYDRYVAICHPLRYLAVMNRQLCIKLLAACWAGGFLHSATQAALVLRLPFCGPNELDNFYCDVPQV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFSLRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSP 263
Cdd:cd15935  162 IKLACMDTYVVEVLMVANSGLLSLVCFLVLLVSYGIILTTLRGRFREGGGKALSTCSSHLTVVSLIFVPCIFVYLRPFSS 241
                        250       260
                 ....*....|....*....|....*..
gi 282847416 264 FSLEKNVFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15935  242 SSVDKVASVFYTLITPALNPLIYTLRN 268
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
24-299 8.32e-93

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 276.83  E-value: 8.32e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15417    2 ILFVLFLGIYLVTLLWNLGLIILIRMDS-HLHTPMYFFLSNLSFVDICYSSSITPKMLSDFFREQKTISFVGCATQYFVF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15417   81 SGMGLTECFLLAAMAYDRYVAICNPLLYSVIMSPRLCVQLVAGAYLGGFLNSLIQTVSMFQLSFCGPNVIDHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15417  161 LSLSCSDTFISQVVLFLVAVLFGVFSVLVVLISYGYIISTiLKIRSAKGRSKAFNTCASHLTAVTLFYGTGLFVYLRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 282847416 263 PFSLEKN--VFIFADVLTPLLNPVVYTFRNKEMKNAIRK 299
Cdd:cd15417  241 SHSQDQDkvASVFYTVVIPMLNPLIYSLRNKEIKDALKR 279
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
24-290 1.26e-92

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 275.90  E-value: 1.26e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15911    2 LLFLLFLVIYIVTMAGNILIIVLVVADRHL-HTPMYFFLGNLSCLEICYTSTILPRMLASLLTGDRTISVSGCIVQFYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15911   81 GSLAATECYLLAVMSYDRYLAICKPLHYASLMNGRLCLQLAAGSWISGFLASTITVILMSQLTFCGPNEIDHFFCDFAPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFAnSGSICIII-FSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPT 261
Cdd:cd15911  161 LKLSCSDTSLVELVTFI-LSSIVTLPpFLLTLTSYICIISTiLRIPSTTGRQKAFSTCSSHLIVVTIFYGTLIIVYVVPS 239
                        250       260       270
                 ....*....|....*....|....*....|.
gi 282847416 262 SPFSLEKN-VF-IFADVLTPLLNPVVYTFRN 290
Cdd:cd15911  240 TNTSRDLNkVFsLFYTVLTPLVNPLIYSLRN 270
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
24-299 4.06e-92

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 275.06  E-value: 4.06e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15409    2 PLFLVFLAIYLITLVGNLGLIALIWKDS-HLHTPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15409   81 GFSATTECFLLAAMAYDRYVAICNPLLYPVVMSNRLCVQLITASYIGGFLHSMIHVGLTFRLSFCGSNEINHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15409  161 LKISCTDPSINELVLFIFSGSIQVFTILTVLISYSYILFTiLKMKSAEGRRKAFSTCGSHLLSVSLFYGSLFFMYVRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 282847416 263 PFSLEKNVF--IFADVLTPLLNPVVYTFRNKEMKNAIRK 299
Cdd:cd15409  241 LYALDQDMMdsLFYTIVIPLLNPFIYSLRNKEVIDALRK 279
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
23-290 3.83e-91

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 272.23  E-value: 3.83e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  23 KLLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFS 102
Cdd:cd15237    1 ILLFILFLLIYLLTLLGNGLIILLIWLDS-RLHTPMYFFLSNLSLLDICYTTSTVPQMLVHLLSEHKTISFVGCAAQMFF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 103 VHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFP 182
Cdd:cd15237   80 FLALGVTECVLLAVMAYDRYVAICNPLRYSVIMSRRVCVRLAATSWASGFLNSLVLTSLTLRLPFCGPNHINHFFCEAPA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 183 LLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPT 261
Cdd:cd15237  160 VLKLACADTSLNEAVIFVTSVLVLLIPFSLILASYIRILATiLRIQSAEGRKKAFSTCASHLTVVTLFYGTAIFMYMRPH 239
                        250       260       270
                 ....*....|....*....|....*....|.
gi 282847416 262 SPFS--LEKNVFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15237  240 STHSpdQDKMISVFYTIVTPMLNPLIYSLRN 270
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
23-290 1.38e-89

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 268.33  E-value: 1.38e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  23 KLLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFS 102
Cdd:cd15918    1 QLLFGLFLGMYLVTVLGNLLIILAIGSDS-HLHTPMYFFLANLSLVDICFTSTTVPKMLVNIQTQSKSISYAGCLTQMYF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 103 VHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFP 182
Cdd:cd15918   80 FLLFGDLDNFLLAVMAYDRYVAICHPLHYTTIMSPRLCILLVAASWVITNLHSLLHTLLMARLSFCASNEIPHFFCDLNP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 183 LLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPT 261
Cdd:cd15918  160 LLKLSCSDTHLNELVILVLGGLVGLVPFLCILVSYVRIVSAvLRIPSAGGKWKAFSTCGSHLSVVSLFYGTVIGVYLSPP 239
                        250       260       270
                 ....*....|....*....|....*....|.
gi 282847416 262 SPFSLEKNVF--IFADVLTPLLNPVVYTFRN 290
Cdd:cd15918  240 SSHSASKDSVaaVMYTVVTPMLNPFIYSLRN 270
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
25-299 2.46e-89

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 268.08  E-value: 2.46e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  25 LFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVH 104
Cdd:cd15416    3 LFVLFLVIYSVTLLGNLSIILLIRISS-QLHTPMYFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSAA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 105 FFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLL 184
Cdd:cd15416   82 TFGTVECFLLAAMAYDRYVAICNPLLYSTIMSQKVCVLLVAASYLGGCLNALVFTTCVFSLSFCGPNEINHFFCDFPPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 185 KLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSP 263
Cdd:cd15416  162 KLSCSDIRLAKILPSISSGIIILVTVLTIIISYLYILIAiLRIRSTEGRHKAFSTCASHLTAVTLFYGTITFIYVMPNSS 241
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 282847416 264 FSLEKN--VFIFADVLTPLLNPVVYTFRNKEMKNAIRK 299
Cdd:cd15416  242 YSMDQNkvVSVFYMVVIPMLNPLIYSLRNKEVKGALKR 279
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
24-299 3.06e-88

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 265.33  E-value: 3.06e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15419    2 LLFLLFLVIYMVTVLGNIGMIIIISTDS-RLHTPMYFFLMNLSFLDLCYSSVIAPKALANFLSESKTISYNGCAAQFFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15419   81 SLFGTTEGFLLAAMAYDRFIAICNPLLYPVIMSRRVCVQLVAGSYLCGCINSIIQTSFTFSLSFCGSNEIDHFFCDVPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15419  161 LKLSCSDTFINELVMFVLCGLIIVSTILVILVSYAYILSTiLRIPSAEGRKKAFSTCASHLTAVSLFYGTVFFMYAQPGA 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 282847416 263 PFSLE--KNVFIFADVLTPLLNPVVYTFRNKEMKNAIRK 299
Cdd:cd15419  241 VSSPEqsKVVSVFYTLVIPMLNPLIYSLRNKDVKEALKR 279
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
24-297 3.94e-88

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 264.68  E-value: 3.94e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15228    2 ILFVLFLAFYLCTLLGNLLILSAILSDPRL-HTPMYFFLCNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFFY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15228   81 HFLGSTECLLYTVMAYDRYVAICHPLRYLLIMNRRVCALLAAGTWITSSFHATILTSLTFTLPYCGSNVVDYFFCDIFPV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15228  161 LKLACADTSIAETVSFTNVGLVPLTCFLLILASYVRIVISiLKMRSAEGRRKAFSTCSSHLTVVTLFFGPCALIYTQPTP 240
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 282847416 263 PFSLEKNVFIFADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15228  241 SPVLVTPVQIFNNVVTPMLNPLIYTLRNKEVKAAL 275
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
24-290 7.76e-88

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 263.93  E-value: 7.76e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15227    2 LHFVLFLLIYLAALTGNLLIITVVTLDH-HLHTPMYFFLKNLSFLDLCYISVTVPKSIANSLTNTRSISFLGCVAQVFLF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15227   81 IFFAASELALLTVMAYDRYVAICHPLHYEVIMNRGACVQMAAASWLSGLLYGALHTANTFSLPFCGSNVIHQFFCDIPQL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVIlFS--LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPT 261
Cdd:cd15227  161 LKLSCSDTYLNEIGVLVLSVCLGLGCFVFIIVSYVHI-FStvLRIPSAQGRSKAFSTCLPHLIVVSLFLSTGSFAYLKPP 239
                        250       260       270
                 ....*....|....*....|....*....|.
gi 282847416 262 SPFSLEKNVF--IFADVLTPLLNPVVYTFRN 290
Cdd:cd15227  240 SDSPSLLDLLlsVFYSVVPPTLNPIIYSLRN 270
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
24-296 8.69e-88

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 263.80  E-value: 8.69e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15420    2 LLFGLFSLLYIFTLLGNGLILGLIWLDSRL-HTPMYFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15420   81 LALAHTECVLLAVMSYDRYVAICHPLRYTVIMNWRVCTTLAATSWACGFLLALVHVVLLLRLPFCGPNEVNHFFCEILAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15420  161 LKLACADTWINEILIFAGCVFILLGPFSLILISYLHILAAiLKIQSAEGRRKAFSTCSSHLCVVGLFYGTAMFMYMVPGS 240
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 282847416 263 --PFSLEKNVFIFADVLTPLLNPVVYTFRNKEMKNA 296
Cdd:cd15420  241 snSAEQEKILSLFYSLFNPMLNPLIYSLRNKQVKGA 276
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
25-290 1.29e-87

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 263.40  E-value: 1.29e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  25 LFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVH 104
Cdd:cd15915    3 LFVLFLLLYLASLLGNGAILAVVIAEPRL-HSPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFFH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 105 FFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLL 184
Cdd:cd15915   82 FLGSSEAMLLAVMAYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALMHTVMTSRLPFCGPNKINHFFCDIKPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 185 KLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFSL--RTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15915  162 KLACGDTSLNLWLLNIVTGSIALGTFILTLLSYIYIISFLllKVRSKEGRHKAFSTCASHLTVVLLLYGPALFTYIRPSS 241
                        250       260       270
                 ....*....|....*....|....*....|
gi 282847416 263 PFSLEKN--VFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15915  242 GDSLEQDriVALLYTVVTPVLNPLIYTLRN 271
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
24-290 2.20e-87

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 262.58  E-value: 2.20e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15232    2 LLFWLFLFLYAAALTGNSLIILAISTSPKL-HTPMYFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15232   81 TWSLGSELLLLTAMAYDRYVAICHPLHYSTIMRKEVCVGLATGVWAIGMLNSAVHTGLMLRLSFCGPNIINHFFCEIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15232  161 LLLSCSDTSLNEIMAFVADVFFGVGNFLLTLTSYGFIIRSiLRIRSTEGKKKAFSTCSSHLIVVSLYYSTVIYTYIRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 282847416 263 PFSLE--KNVFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15232  241 SYSPEkdKVVAVLYSVVTPTLNPLIYSLRN 270
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
25-299 2.99e-87

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 262.64  E-value: 2.99e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  25 LFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVH 104
Cdd:cd15411    3 LFVLFLVIYVITVMGNLGMILLIRADS-QLHTPMYFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFFI 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 105 FFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLL 184
Cdd:cd15411   82 ALATTECFLLGLMAYDRYVAICNPLLYTVVMSRRVCLKLAAGSYAAGFLNSLIHTTLISRLSFCGSNVINHFFCDTPPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 185 KLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSP 263
Cdd:cd15411  162 KLSCSDTHVNEMLIFILAGLTLVGSLLIILVSYTYILSTiLKIRSAEGRRKAFSTCASHLTAVTIFYGTGIFTYLRPSSS 241
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 282847416 264 FSLEKNVF--IFADVLTPLLNPVVYTFRNKEMKNAIRK 299
Cdd:cd15411  242 YSLGQDKVasVFYTVVIPMLNPLIYSLRNKEVKNALRR 279
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
24-296 3.59e-87

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 262.49  E-value: 3.59e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15421    2 FLFSLILLIFLVALTGNALLILLIWLDS-RLHTPMYFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGTQIFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15421   81 LTLGGAECLLLALMAYDRYVAICHPLRYPVLMSPRVCLLMAAGSWLGGSLNSLIHTVYTMHFPYCGSREIHHFFCEVPAL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15421  161 LKLSCADTSAYETVVYVSGVLFLLIPFSLILASYALILLTvLRMRSAEGRKKALATCSSHLTVVSLYYGPAIFTYMRPGS 240
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 282847416 263 PFSLE--KNVFIFADVLTPLLNPVVYTFRNKEMKNA 296
Cdd:cd15421  241 YHSPEqdKVVSVFYTILTPMLNPLIYSLRNKEVLGA 276
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
24-297 2.49e-86

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 260.07  E-value: 2.49e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLF-YKRKTISFECCMTQVFS 102
Cdd:cd15916    2 LLFLIFLIIYLLTVLGNLLILLTVWVDS-HLHRPMYIFLGHLSFLDMWLSTVTVPKMLAGFLePGGKVISFGGCVAQLYF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 103 VHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFP 182
Cdd:cd15916   81 FHFLGSTECFLYTLMAYDRYLAICHPLHYPTIMTGRLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGPNRIDYFFCDIPP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 183 LLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPT 261
Cdd:cd15916  161 LLKLACADTTINELVIFASIGVVALGCFILILLSYGNIVRAiLRIRTAEGRRRAFSTCASHLIVVLCFYVPCVFIYLRPG 240
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 282847416 262 SPFSLEKNVFIFADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15916  241 SKEALDGVIAVFYTVVTPLLNPLIYTLRNKEVKTAL 276
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
25-299 4.63e-86

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 259.65  E-value: 4.63e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  25 LFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVH 104
Cdd:cd15415    3 LFMLFLLIYFITLLGNLGMIVLIRINP-QLHTPMYFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYSACIAQHFFFA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 105 FFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLL 184
Cdd:cd15415   82 VFVTTEGFLLAVMAYDRYVAICNPLLYTVAMTKRVCVQLVAGSYLGGLINSLTHTIGLLKLSFCGPNVINHYFCDIPPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 185 KLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSP 263
Cdd:cd15415  162 KLSCSDTHINELLLLTFSGVIAMSTLLTIIISYIFILFAiLRIRSAEGRRKAFSTCASHLTAVTLFYGSVSFSYIQPSSQ 241
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 282847416 264 FSL--EKNVFIFADVLTPLLNPVVYTFRNKEMKNAIRK 299
Cdd:cd15415  242 YSLeqEKVSAVFYTLVIPMLNPLIYSLRNKDVKDALKR 279
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
25-296 1.01e-85

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 258.87  E-value: 1.01e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  25 LFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVH 104
Cdd:cd15429    3 LFVLFLVMYLLTLLGNFLIILLIRLDP-RLHTPMYFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVAQLFISL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 105 FFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLL 184
Cdd:cd15429   82 ALGGTEFILLAVMAYDRYVAVCHPLRYTVIMSGGLCIQLAAASWTSGFLNSLVQTAFTFRLPFCGHNTINHFSCELLAVV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 185 KLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSP 263
Cdd:cd15429  162 RLACVDTSLNEVAILVSSVVVLLTPCFLVLLSYIHIISAiLRIRSSEGRHKAFSTCASHLTVVSLCYGTAIFTYMRPRSG 241
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 282847416 264 FS--LEKNVFIFADVLTPLLNPVVYTFRNKEMKNA 296
Cdd:cd15429  242 SSalQEKMISLFYAVVTPMLNPLIYSLRNKEVKGA 276
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
24-290 1.02e-85

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 258.31  E-value: 1.02e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15431    2 ILFVLLLIVYLVTLLGNGLIILLIRVDS-QLHTPMYFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYIS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQiIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15431   81 LFLGITECLLLAVMAYDRFVAICNPLRYTLIMSWRVCIQLAAGSWVSAFLLTVIP-VLTMPLHFCGPNVINHFFCEVQAL 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15431  160 LKLACSDTSLNEILMFATSIFTLLLPFSFILVSYIRIGVAvLRIRSAEGRRKAFSTCGSHLTVVTIFYGTAIFMYLRPQS 239
                        250       260       270
                 ....*....|....*....|....*....|
gi 282847416 263 PFSLEKN--VFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15431  240 KSSSDQDkiISVFYGVVTPMLNPLIYSLRN 269
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
10-299 1.82e-85

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 258.52  E-value: 1.82e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  10 FVLLGLSQNPKVEKLLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRK 89
Cdd:cd15945    1 FILLGFTDYLSLKVTLFLVFLLVYLLTLVGNVGMIILIRMDSQL-HTPMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  90 TISFECCMTQVFSVHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCG 169
Cdd:cd15945   80 SIPFYGCALQMFFFAAFADAECLLLAVMAYDRYVAICNPLLYTTAMSRRVCYLLLVGAYLSGMATSLVHTTLTFRLSFCG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 170 PNFIDHFICDLFPLLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVL 248
Cdd:cd15945  160 SNTINHFFCDIPPLLALSCSDTQINELLLFALCGFIQTSTFLAIIISYCYIIITvLKIRSAEGRFKAFSTCASHLTAVGL 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 282847416 249 FFVPCILIYARPTSPFSL--EKNVFIFADVLTPLLNPVVYTFRNKEMKNAIRK 299
Cdd:cd15945  240 FYGTLLFMYLRPSSSYSLdtDKMTSVFYTLVIPMLNPLIYSLRNKDVKEALKK 292
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
23-299 2.62e-84

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 255.02  E-value: 2.62e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  23 KLLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFS 102
Cdd:cd15412    1 PLLFVLFLVIYLITLLGNLGMILLIRLDS-RLHTPMYFFLSHLSFVDLCYSSNVTPKMLVNFLSEKKTISFAGCFTQCYF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 103 VHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFP 182
Cdd:cd15412   80 FIALVITEYYMLAVMAYDRYMAICNPLLYSVKMSRRVCISLVTFPYIYGFLNGLIQTILTFRLSFCGSNVINHFYCADPP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 183 LLKLACTDTHI-----FVILVFANSGSICIIifsflLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILI 256
Cdd:cd15412  160 LIKLSCSDTYVketamFIVAGFNLSSSLLII-----LISYLFILIAiLRIRSAEGRCKAFSTCGSHLTAVTIFYGTLFCM 234
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 282847416 257 YARPTSPFSLE--KNVFIFADVLTPLLNPVVYTFRNKEMKNAIRK 299
Cdd:cd15412  235 YLRPPSEESVEqsKIVAVFYTFVSPMLNPLIYSLRNKDVKQALKK 279
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
25-299 1.40e-83

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 253.40  E-value: 1.40e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  25 LFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVH 104
Cdd:cd15413    3 LFGLFLVIYLTTVMGNLGMIILTRLDS-RLQTPMYFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLAFFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 105 FFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLL 184
Cdd:cd15413   82 TFIISELFLLSAMAYDRYVAICNPLLYTVIMSQRVCIVLVAIPYLYSFFVALFHTIKTFRLSFCGSNVINHFYCDDLPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 185 KLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSP 263
Cdd:cd15413  162 ALSCSDTHEKELIILIFAGFNLISSLLIVLVSYLFILSAiLRIRSAEGRQKAFSTCGSHLTVVTIFYGTLIFMYLQPKSS 241
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 282847416 264 FSLE--KNVFIFADVLTPLLNPVVYTFRNKEMKNAIRK 299
Cdd:cd15413  242 HSLDtdKMASVFYTLVIPMLNPLIYSLRNKEVKDALKK 279
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
25-290 1.44e-82

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 250.23  E-value: 1.44e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  25 LFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVH 104
Cdd:cd15947    3 LFVVVLIFYLLTLLGNTAIILLSLLDP-RLHTPMYFFLSNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLYIFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 105 FFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLL 184
Cdd:cd15947   82 WLGSTECVLLAVMAFDRYVAVCRPLHYTVIMHPRLCVQLAALSWLSGLANSLLQTTLTLQLPLCGHHTLDHFFCEVPALI 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 185 KLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSP 263
Cdd:cd15947  162 KLACVDTTFNELELFVASVFFLLVPLSLILVSYGFIARAvLRIKSAEGRRKAFGTCSSHLLVVSLFYGTAIYMYLQPPSS 241
                        250       260
                 ....*....|....*....|....*....
gi 282847416 264 FSLEKNVFI--FADVLTPLLNPVVYTFRN 290
Cdd:cd15947  242 YSQDQGKFIslFYTVVTPTLNPLIYTLRN 270
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
24-302 1.16e-81

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 248.50  E-value: 1.16e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15414    2 PLFLLFLLVYLITLLGNLGMIILIQVDS-RLHTPMYFFLSHLSFVDLCYSSVVTPKMLSDFFVEKKAISFLGCAAQMWFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15414   81 GLFVAAECFLLASMAYDRYVAICNPLLYTVIMSQRVCVQLVVGPYVVGLLNTTTHTTAAFFLPFCGPNVINHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15414  161 LSLSCADTQINKWVLFIMAGALGVLSGLIILVSYIYILIAiLRIRSAEGRRKAFSTCSSHLTAVSILYGTLFFIYVRPSS 240
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 282847416 263 PFSLE--KNVFIFADVLTPLLNPVVYTFRNKEMKNAIRKMWR 302
Cdd:cd15414  241 SSSLDldKVVSVFYTAVIPMLNPLIYSLRNKEVKDALRRTIR 282
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
24-297 2.47e-80

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 245.03  E-value: 2.47e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSpVLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15424    2 LLFVVILIIYLLTILGNLVIIILVQTD-SRLHTPMYFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15424   81 LSLGSTECLLLGAMAYDRYLAICHPLLYAAAMGRWRQLQLALSCWAIGFLLSVINVGCTLRHPFCGPNHINHFFCELPVV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15424  161 LKLACADTHITEAIVFGAGVLILLVPLSVILTSYGLILASvLQMQSAAGRHKAFSTCASHLAVVTLFYGTVISMYMRPRS 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 282847416 263 PFS--LEKNVFIFADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15424  241 GSTpdRDKQIAVFYIVITPLLNPIIYTLRNKDVHGAA 277
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
14-300 2.41e-79

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 243.04  E-value: 2.41e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  14 GLSQNPKVEKLLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISF 93
Cdd:cd15406    1 GLTDQPELQLPLFLLFLGIYVVTVVGNLGMILLITLSS-QLHTPMYYFLSNLSFIDLCYSSVITPKMLVNFVSEKNIISY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  94 ECCMTQVFSVHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFI 173
Cdd:cd15406   80 PECMTQLFFFCVFAIAECYMLTAMAYDRYVAICNPLLYNVTMSPRVCSLLVAGVYIMGLIGATVHTSCMLRLSFCGDNVI 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 174 DHFICDLFPLLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVP 252
Cdd:cd15406  160 NHYFCDILPLLKLSCSSTYINELLLFIVGGFNVLATTLAILISYAFILSSiLRIRSAEGRSKAFSTCSSHLAAVGVFYGS 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 282847416 253 CILIYARPTSPFSL--EKNVFIFADVLTPLLNPVVYTFRNKEMKNAIRKM 300
Cdd:cd15406  240 IIFMYLKPSSSSSMtqEKVSSVFYTTVIPMLNPLIYSLRNKDVKNALKKV 289
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
10-300 2.74e-79

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 242.77  E-value: 2.74e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  10 FVLLGLSQNPKVEKLLFVIFLLLYLATIGGNMTIVVTIaSSPVLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRK 89
Cdd:cd15944    1 FILLGFTQDPQMQIILFVVFLIIYLVNVVGNLGMIILI-TTDSQLHTPMYFFLCNLSFCDLGYSSAIAPRMLADFLTKHK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  90 TISFECCMTQVFSVHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCG 169
Cdd:cd15944   80 VISFSGCATQFAFFVGFVDAECYVLAAMAYDRYVAICNPLLYSTLMSKRVCLQLMAGSYLAGLVNLVIHTTATFSLSFCG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 170 PNFIDHFICDLFPLLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVL 248
Cdd:cd15944  160 SNIINHFFCDVPPLLALSCSDTHINEILLYVFCGFVEMSSLSIILISYLFILVAiLRMRSAEGRRKAFSTCASHFTGVTL 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 282847416 249 FFVPCILIYARPTSPFSLE--KNVFIFADVLTPLLNPVVYTFRNKEMKNAIRKM 300
Cdd:cd15944  240 FYGTVIFMYLRPTSVYSLDqdKWASVFYTVVIPMLNPLIYSLRNKDVKEAFKKL 293
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
24-290 6.42e-79

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 241.03  E-value: 6.42e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFsv 103
Cdd:cd15224    2 LLFLLFLIAYVLTLLENLLIILTIWLNSQL-HKPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLY-- 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 hFFSAV---EVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDL 180
Cdd:cd15224   79 -FFLSLactECVLLAVMAYDRYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGPNVINHFFCDI 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 181 FPLLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYAR 259
Cdd:cd15224  158 SPLLNLSCTDMSLAELVDFILALIILLVPLLVTVASYICIISTvLRIPSATGRQKAFSTCASHLTVVIIFYSATLFMYAR 237
                        250       260       270
                 ....*....|....*....|....*....|...
gi 282847416 260 P--TSPFSLEKNVFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15224  238 PkaISSFDSNKLVSVLYTVVTPLLNPIIYCLRN 270
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
25-297 3.04e-78

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 239.64  E-value: 3.04e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  25 LFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVH 104
Cdd:cd15942    3 LFLFFLVVYLLTLSGNSLIILVVISDL-QLHKPMYWFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVTQLFFFH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 105 FFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLL 184
Cdd:cd15942   82 FLGCAECFLYTVMAYDRFLAICKPLHYSTIMNHRACLCLSLGTWLGGCLHSTFQTSLTFRLPYGQKNEVDYIFCDIPAML 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 185 KLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSP 263
Cdd:cd15942  162 KLACADTAFNELVTFIDIGLVAMTCFLLILMSYVYIVSAiLKIPSAEGQRRAFSTCTAHLTVVVIYYVPLTFIYLRPGSQ 241
                        250       260       270
                 ....*....|....*....|....*....|....
gi 282847416 264 FSLEKNVFIFADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15942  242 DPLDGVVAVFYTTVTPLLNPVIYTLRNKEMKDAL 275
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
24-297 8.33e-78

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 238.59  E-value: 8.33e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKR-KTISFECCMTQVFS 102
Cdd:cd15941    2 LFFLLFLLIYLLTVLGNLLILLTIGSDPHLHGLPMYHFLGHLSFLDACLSSVTVPKVLAGLLTLSgRTISFEGCVVQLYA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 103 VHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFP 182
Cdd:cd15941   82 FHFLASTECFLYTVMAYDRYLAICHPLHYPTAMNRRMCAGLAGGTWATGATHAAIHTSLTFRLPYCGPCQIAYFFCDIPP 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 183 LLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPT 261
Cdd:cd15941  162 VLKLACADTTINELVILANIGIVAAGCFLLIVISYIYIVAAvLRIRTAEGRQRAFSTCSAHLTGVLLYYVPSVFIYLQPS 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 282847416 262 SPFSLEKNVFIFADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15941  242 SSQAGAGAPAVFYTIVTPMLNPFIYTLRNKEVKRAL 277
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
23-297 5.23e-77

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 236.51  E-value: 5.23e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  23 KLLFVIFLLLYLATIGGNMTIVVtIASSPVLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFS 102
Cdd:cd15434    1 KILSVVVLIFYLLTLVGNTTIIL-VSCLDSRLHTPMYFFLANLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLFI 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 103 VHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFP 182
Cdd:cd15434   80 ALGLGGTECVLLAVMAYDRYAAVCQPLHYTVVMHPRLCWKLVAMSWLIGFGNSLVLSPLTLSLPRCGHHRVDHFFCEMPA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 183 LLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPT 261
Cdd:cd15434  160 LIKLACVDTTAYEATIFALGVFILLFPLSLILVSYGYIARAvLKIKSAAGRKKAFGTCGSHLTVVSLFYGTIIYMYLQPK 239
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 282847416 262 SPFSLEKNVF--IFADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15434  240 NSVSQDQGKFltLFYTIVTPSLNPLIYTLRNKDVKGAL 277
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
24-297 3.64e-75

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 231.70  E-value: 3.64e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15234    2 LLFGLFLSMYLVTVLGNLLIILAVSSDS-HLHTPMYFFLSNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTQMCFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15234   81 LLFGGLDNFLLAVMAYDRYVAICHPLHYTVIMNPCLCGLLVLLSLLISILDSLLHSLMVLQLSFCTDVEIPHFFCELAQV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15234  161 LKLACSDTLINNILIYLATVIFGGIPLSGIIFSYYKIVSSiLRIPSSGGKYKAFSTCGSHLSVVSLFYGTGLGVYISSAV 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 282847416 263 PFSLEKNVF--IFADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15234  241 THSSRKTAVasVMYTVVTPMLNPFIYSLRNKDMKGAL 277
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
24-290 7.08e-75

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 230.72  E-value: 7.08e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15914    2 LLFILLLLIYLFIITGNLLIFTVVRLDTHL-HTPMYFFISILSFLEIWYTTVTIPKMLSNLLSEEKTISFNGCLLQMYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15914   81 HSLGITECYLLTAMAYDRYLAICNPLHYPSIMTPKLCTQLAAGCWLCGFLGPVPEIILISTLPFCGPNQIQHIFCDFPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15914  161 LSLACTDTSLNVLVDFVIHAVIILLTFLLILLSYVKIISVvLKIPSAEGRQKAFSTCAAHLTVVLLFFGSVSFMYLRLSK 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 282847416 263 PFSL--EKNVFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15914  241 SYSLdyDRAIAVVYAVLTPFFNPIIYSLRN 270
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
24-299 8.22e-74

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 228.51  E-value: 8.22e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15418    3 ILFVVFLLSYILTLVGNLTLIALICLDS-RLHTPMYFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFFFS 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15418   82 AGLAYSECFLLAAMAYDRYVAICNPLLYSSAMSKKLCMGLVAASYLGGFANAIIHTSNTFRLHFCGDNIIDHFFCDLPPL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15418  162 VKLACDDTRVYELILYFILGFNVIAPTALILASYTFILAAiLRIHSASGRHKAFSTCSAHLTSVTLYYGSILFIYSRPSS 241
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 282847416 263 PFSLEKN--VFIFADVLTPLLNPVVYTFRNKEMKNAIRK 299
Cdd:cd15418  242 SHTPDRDkvVALFYTVVNPLLNPLIYSLRNKDVKEALKK 280
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
23-297 2.68e-72

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 224.66  E-value: 2.68e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  23 KLLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFS 102
Cdd:cd15432    1 MVLFVVFLIFYILTLLGNLAIILVSRLDPQL-HTPMYFFLSNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFI 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 103 VHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFP 182
Cdd:cd15432   80 FLGLGSTECVLLAVMAFDRFAAICQPLHYSVIMHQRLCQQLAAGAWISGFANSLVQSTLTLKMPRCGRRRVDHFFCEVPA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 183 LLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPT 261
Cdd:cd15432  160 LLKLSCVDTTANEAELFVISVLLLLIPLGLILISYIFIVRAvLRIRSAEGRRKAFNTCGSHLLVVSLFYGTAISMYLQPP 239
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 282847416 262 SPFSLE--KNVFIFADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15432  240 SNSSHDrgKMVALFYGIITPMLNPLIYTLRNKDVKEAL 277
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
25-299 1.10e-71

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 223.07  E-value: 1.10e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  25 LFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVH 104
Cdd:cd15407    3 LFIIFTLIYLITLVGNLGMILLILLDSRL-HTPMYFFLSNLSLVDIGYSSAVTPKVMAGLLTGDKVISYNACAAQMFFFV 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 105 FFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLL 184
Cdd:cd15407   82 VFATVENFLLASMAYDRHAAVCKPLHYTTTMTTKVCACLTIGCYVCGFLNASIHTGNTFRLSFCKSNVINHFFCDIPPVL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 185 KLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSP 263
Cdd:cd15407  162 ALSCSDIHISEIVLFFLASFNVFFALLVILISYLFIFITiLRMRSAEGHQKAFSTCASHLTAVSIFYGTVIFMYLQPSSS 241
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 282847416 264 FSLE--KNVFIFADVLTPLLNPVVYTFRNKEMKNAIRK 299
Cdd:cd15407  242 HSMDtdKMASVFYTMVIPMLNPLVYSLRNKEVKSAFKK 279
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
23-290 9.45e-71

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 220.32  E-value: 9.45e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  23 KLLFVIFLLLYLATIGGNMT-IVVTIASSPvlLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVF 101
Cdd:cd15430    1 ILLFVLCLIMYLVILLGNGVlIIITILDSH--LHTPMYFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMY 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 102 SVHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLF 181
Cdd:cd15430   79 LSLAMGSTECVLLAVMAYDRYVAICNPLRYPIIMNKRLCVQMAAGSWVTGFLNSLVETVLAMQLPFCGNNVINHFTCEIL 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 182 PLLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARP 260
Cdd:cd15430  159 AVLKLACVDISLNEIIMLVGNIIFLVIPLLLICISYIFILSTiLRINSAEGRKKAFSTCSAHLTVVIIFYGTILFMYMKP 238
                        250       260       270
                 ....*....|....*....|....*....|..
gi 282847416 261 TSPFSLEKNVFI--FADVLTPLLNPVVYTFRN 290
Cdd:cd15430  239 KSKNAQISDKLItlFYGVVTPMLNPIIYSLRN 270
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
24-290 2.01e-70

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 219.49  E-value: 2.01e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15913    2 LLFSFFSVIYILTLLGNGAIICAVWWDR-RLHTPMYILLGNFSFLEICYVTSTVPNMLVNFLSETKTISFSGCFLQFYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15913   81 FSLGTTECFFLSVMAFDRYLAICRPLHYPTIMTGQLCGKLVAFCWVCGFLWFLIPVVLISQLPFCGPNIIDHFLCDPGPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSY-VVILFSLRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15913  161 LALSCVPAPGTELICYTLSSLIIFGTFLFILGSYtLVLRAVLRVPSAAGRHKAFSTCGSHLAVVSLFYGSVMVMYVSPGS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 282847416 263 --PFSLEKNVFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15913  241 gnSTGMQKIVTLFYSVVTPLLNPLIYSLRN 270
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
25-297 5.90e-70

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 218.44  E-value: 5.90e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  25 LFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVH 104
Cdd:cd15405    3 LFFLFLGIYVVTVVGNLGLITLICLNS-HLHTPMYFFLFNLSFIDLCYSSVFTPKMLMNFVSEKNTISYAGCMTQLFFFC 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 105 FFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLL 184
Cdd:cd15405   82 FFVISECYVLTAMAYDRYVAICNPLLYTVTMSPQVCSLLMLGSYVMGFAGAMAHTGCMLRLTFCDSNIINHYMCDILPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 185 KLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSP 263
Cdd:cd15405  162 QLSCTSTYVNELVVFVVVGINIIVPSVTIFISYALILSNiLHISSTEGRSKAFSTCSSHIIAVSLFFGSGAFMYLKPSSV 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 282847416 264 FSLEKNVF--IFADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15405  242 GSVNQGKVssVFYTNVVPMLNPLIYSLRNKDVKLAL 277
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
24-297 1.29e-69

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 217.74  E-value: 1.29e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15233    2 VLFVTFLLAYIVTIGGNLSILAAILLEP-KLHTPMYFFLGNLSLLDIGCISVTVPQMLVHLLSHKRTISYAACLSQLFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15233   81 HLLAGADCFLLTAMAYDRYLAICQPLTYSVRMSWRVQTALVGISCACAFTNALTHTVAMSTLKFCGPNVINHFFCDLPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYV-VILFSLRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15233  161 FQLSCSSTHLNELLLFVFAFFMALAPCVLIVVSYAhVVAAVLRIRSAEGRRKAFSTCGSHLTVVCIFYGTGVFSYMRLGS 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 282847416 263 PFSLEKN--VFIFADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15233  241 VYSSDKDkvIGILNTVLSPMLNPLIYSLRNKDVKGAL 277
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
24-297 6.81e-69

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 215.81  E-value: 6.81e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15428    2 LLFILFLIIYLMTVLGNLLLVLLVIVDSHL-HTPMYFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15428   81 LSFGITECALLSVMSYDRYVAICLPLRYSLIMTWKVCISLATGSWVGGLLVSAVDTAFTLNLSFGGHNKINHFLCEMPAL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15428  161 LKLASTDTHQAEMAMFIMCVFTLVLPVLLILASYTRIIYTvFGMQSLTGRLKAFSTCSSHLMVVSLFYGSVLSTYMRPKS 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 282847416 263 PFS--LEKNVFIFADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15428  241 STSkeYDKMISVFYIIVTPMLNPLIYSLRNKEVKHAL 277
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
24-290 1.25e-68

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 215.04  E-value: 1.25e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNmTIVVTIASSPVLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15946    2 ILFAVFLLIYLSILLGN-GLIITLICLDSRLHTPMYFFLSVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYIF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15946   81 LALGITECTLFSVMAYDRYVAICHPLRYKVIMSWGLCILMVAGSWVCGVFSSLLHTFFTMRLPYCGPNEINHYFCEVPAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15946  161 LKLACADTSLNEMVDFVLGVIVLVVPLSLILASYVNIFKAiLKIRSTQGRCKAFSTCASHITVVTMFYGPAMFMYMRPGS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 282847416 263 PFSLE--KNVFIFADVLTPLLNPVVYTFRN 290
Cdd:cd15946  241 NYSPErdKKISLFYNVFTALLNPVIYSLRN 270
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
23-297 1.71e-67

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 212.34  E-value: 1.71e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  23 KLLFVIFLLLYLATIGGNmTIVVTIASSPVLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFS 102
Cdd:cd15433    1 PVLFVVVLIFYLLTLVGN-TIIILLSVRDLRLHTPMYYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFI 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 103 VHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFP 182
Cdd:cd15433   80 SLALGSAECVLLAVMAFDRYAAVCRPLHYAALMSPRLCQTLASISWLSGFVNSVAQTGLLAERPLCGHRLLDHFFCEMPV 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 183 LLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPT 261
Cdd:cd15433  160 FLKLACGDDETTEVQMFVARVVILLLPAALILGSYGHVAHAvLRIKSSAGRRRAFGTCGSHLMVVFLFYGSAIYTYLQPI 239
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 282847416 262 SPFSLEKNVFI--FADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15433  240 HRYSQAHGKFVslFYTVMTPALNPLIYTLRNKDVKGAL 277
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
24-297 9.47e-63

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 199.99  E-value: 9.47e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15236    2 VFFALFLAMYLTTVLGNLLIILLIRLDS-HLHTPMYFFLSHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15236   81 IFFGCLDSFLLAVMAYDRYVAICHPLHYTAIMRPELCVLLVAGSWVLTCFHALLHTLLLARLSFCADNVIPHFFCDLVAL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTS 262
Cdd:cd15236  161 LKLSCSSTSLNELVIFTEGGLLFVLPLLLILGSYIRIAATiLKVPSTKGICKAFSTCGSHLSVVFLYYGTIIGVYFFPSS 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 282847416 263 PFSLEKNVF--IFADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15236  241 NNSSDKDIVasVMYTVVTPMLNPFIYSLRNRDIKGAL 277
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
24-297 1.20e-57

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 187.11  E-value: 1.20e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15223    2 WLSLPFLLLYLVALVANSLLLLIIKLERSL-HQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPL 183
Cdd:cd15223   81 HFFTAMESSILLVMALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSNVIEHCYCDHMAL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKLACTDT---HIF-VILVFANSGS-ICIIIFSFLLVSYVVilfsLRTHSSEGRRKALSTCGSHITVVVLFF--VPCILI 256
Cdd:cd15223  161 VSLACGDTtinSIYgLAVAWLIVGSdIILIFFSYALILRAV----LRLASGEARSKALNTCGSHLIVILFFYtaVLVSSL 236
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 282847416 257 YARPTSPFSLEKNVFI--FADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15223  237 TYRFGKTIPPDVHVLLsvLYILIPPALNPIIYGVRTKEIRQGF 279
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
29-293 2.36e-53

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 175.56  E-value: 2.36e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  29 FLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVHFFSA 108
Cdd:cd15917    7 FCAMYLVALLGNITILFVIKIESSL-HEPMYLFLAMLAATDLVLSTSTVPKMLGIFWFNAREISFDACLAQMFFIHSFTA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 109 VEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLLKLAC 188
Cdd:cd15917   86 MESGVLLAMAFDRYVAICYPLRYTTILTNTVVGKIGLAILLRAVALIIPLPLLVRRLPYCGSNVISHSYCEHMAVVKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 189 TDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSPFSLE 267
Cdd:cd15917  166 GDTRVNSIYGLFVALLIVGFDLLFIALSYVLILRAvLQLPSKEARLKALSTCGSHICVILIFYTPALFSFLTHRFGHHVP 245
                        250       260       270
                 ....*....|....*....|....*....|
gi 282847416 268 KNVFIFAD----VLTPLLNPVVYTFRNKEM 293
Cdd:cd15917  246 PHVHILLAnlylLLPPMLNPIVYGVRTKQI 275
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
25-292 5.23e-53

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 174.61  E-value: 5.23e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  25 LFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVH 104
Cdd:cd15222    3 ISIPFCLLYLVALLGNSTILFVIKTEPSL-HEPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFFIH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 105 FFSAVEVIILAAMAYDRYVAICKPLHYSSIM-NRRLCGILVGIAFAGGFLhsIIQIIFTLQ-LPFCGPNFIDHFICdLFP 182
Cdd:cd15222   82 TFSFMESSVLLAMAFDRFVAICNPLRYASILtNSRIAKIGLAIVLRSVLL--LLPLPFLLKrLPFCHSNVLSHSYC-LHQ 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 183 -LLKLACTDTHI------FVILVFANSGSICIiifsflLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCI 254
Cdd:cd15222  159 dVMKLACSDTRVnsiyglFVVLSTMGLDSLLI------LLSYVLILKTvLGIASREERLKALNTCVSHICAVLIFYVPMI 232
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 282847416 255 LI-----YARPTSPF--SLEKNVFIFadvLTPLLNPVVYTFRNKE 292
Cdd:cd15222  233 GLsmvhrFGKHASPLvhVLMANVYLL---VPPVLNPIIYSVKTKQ 274
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
29-293 1.91e-51

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 170.64  E-value: 1.91e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  29 FLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVHFFSA 108
Cdd:cd15952    7 FCAVYLIALLGNCTILFVIKTEQSL-HQPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFIHTFTG 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 109 VEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLLKLAC 188
Cdd:cd15952   86 MESAVLVAMAFDRYVAICNPLRYTTILTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCGHNIIPHTYCEHMGIAKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 189 TDTHIFVILVFansGSICIIIFSFLLV--SYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYAR------ 259
Cdd:cd15952  166 ASIRINIIYGL---FAISVLVLDVILIalSYVLILRAvFRLPSHDARLKALSTCGSHVCVILAFYTPALFSFLThrfghn 242
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 282847416 260 -PTSPFSLEKNVFIfadVLTPLLNPVVYTFRNKEM 293
Cdd:cd15952  243 iPRYIHILLANLYV---VLPPMLNPVIYGVRTKQI 274
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
29-293 2.26e-51

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 170.67  E-value: 2.26e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  29 FLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVHFFSA 108
Cdd:cd15950    7 FCSMYVIALLGNGTILLVIKLDPSL-HEPMYYFLCMLAVIDLVMSTSIVPKMLSIFWLGSAEISFEACFTQMFFVHSFTA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 109 VEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLLKLAC 188
Cdd:cd15950   86 VESGVLLAMAFDRYVAICHPLRYSAILTSQVIAQIGLAIVLRALLFMTPLTCLVTSLPYCGSRVVPHSYCEHMAVVKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 189 TDTHifVILVFANSGSICIIIFS--FLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSPFS 265
Cdd:cd15950  166 ADPR--PSSLYSITGSTLVVGTDsaFIAVSYGLILRAvLGLSSKEARLKAFSTCGSHVCVILLFYIPGLLSIYTQRFGQG 243
                        250       260       270
                 ....*....|....*....|....*....|..
gi 282847416 266 LEKNVFIF-AD---VLTPLLNPVVYTFRNKEM 293
Cdd:cd15950  244 VPPHTQVLlADlylLVPPMLNPIIYGMRTKQI 275
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
29-292 8.10e-49

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 164.00  E-value: 8.10e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  29 FLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVHFFSA 108
Cdd:cd15221    7 FCSMYIVALLGNSLLLFVIVTERSL-HEPMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFVHFVFV 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 109 VEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLLKLAC 188
Cdd:cd15221   86 TESAILLAMAFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFCIVFPFVFLLKRLPYCGHNVIPHTYCEHMGIARLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 189 TDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIY-------ARP 260
Cdd:cd15221  166 ADITVNIWYGLTVALLTVGLDVVLIAVSYALILRAvFRLPSKDARLKALSTCGSHVCVILMFYTPAFFSFlthrfgrHIP 245
                        250       260       270
                 ....*....|....*....|....*....|..
gi 282847416 261 TSPFSLEKNVFIfadVLTPLLNPVVYTFRNKE 292
Cdd:cd15221  246 RHVHILLANLYV---LVPPMLNPIVYGVKTKQ 274
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
27-292 3.17e-43

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 149.42  E-value: 3.17e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  27 VIFLLLYLATIGGNMTIVVTIASSPVLLGsPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVHFF 106
Cdd:cd15951    5 IPFCIMYAVALLGNFTILFIVKTEPSLHE-PMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFIHSF 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 107 SAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLLKL 186
Cdd:cd15951   84 STMESGIFVAMALDRYVAICNPLRHSTILTNSVVAKIGLAVVLRGGILVSPHPFLLRRLPYCRTNIIPHTYCEHMAVVKL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 187 ACTDTHIFVilvfANSGSICIII----FSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPT 261
Cdd:cd15951  164 ACADTRVSR----AYGLSVAFLVggldVIFIAVSYIQILRAvFKLPSKEARLKTFGTCGSHICVILVFYIPALFSFLTHR 239
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 282847416 262 SPFSLEKNVFIF-ADV---LTPLLNPVVYTFRNKE 292
Cdd:cd15951  240 FGHNVPPHVHILiANVyllVPPMLNPIIYGVRTKQ 274
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
29-292 7.21e-41

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 143.17  E-value: 7.21e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  29 FLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVHFFSA 108
Cdd:cd15953    7 FCLMYIVTLLGNCTILFVVGKEQSL-HKPMYLLLCMLALTDLVLSTSVVPKALCIFWFNLKEITFSGCLTQMFFIHTLSI 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 109 VEVIILAAMAYDRYVAICKPLHYSSIM-NRRLCGI-LVGIAFAGGFlhsIIQIIFTL-QLPFCGPNFIDHFICDLFPLLK 185
Cdd:cd15953   86 MESAVLVAMAFDRYVAICNPLRYATILtNSRIAKLgLVGLIRGVLL---ILPLPLLLsRLPFCANRIIPHTYCEHMAVVK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 186 LACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCilIYARPTSPF 264
Cdd:cd15953  163 LACGDTTINRIYGLVVALLVVGLDLLLIALSYALIIRAvLRLSSKKARQKALNTCTAHICVILMSYTPA--LFSFLTHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 282847416 265 SleKNV-----FIFADV---LTPLLNPVVYTFRNKE 292
Cdd:cd15953  241 G--QGIaphihIILANLyllVPPMLNPIIYGVKTKE 274
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
29-300 1.28e-39

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 140.33  E-value: 1.28e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416   29 FLLLYLATIGGNMTIVVTIASSpVLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVHFFSA 108
Cdd:pfam13853   1 FCLMYLIIFLGNGTILFVIKTE-SSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  109 VEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLLKLAC 188
Cdd:pfam13853  80 MESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSC 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  189 TDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILI-----YARPTS 262
Cdd:pfam13853 160 ADIKVNNIYGLFVVTSTFGIDSLLIVLSYGLILRTvLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLsmvhrFGHNVP 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 282847416  263 PF--SLEKNVFIFadvLTPLLNPVVYTFRNKEMKNAIRKM 300
Cdd:pfam13853 240 PLlqIMMANAYLF---FPPVLNPIVYSVKTKQIRDCVKRM 276
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
29-294 1.09e-38

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 137.73  E-value: 1.09e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  29 FLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVHFFSA 108
Cdd:cd15948    8 FCSAFTVALLGNCTLLYVIKTEPSL-HEPMFYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFNACLVQMFFLHSFSI 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 109 VEVIILAAMAYDRYVAICKPLHYSSIMNRRLCgILVGIAFAGGFLHSIIQIIFTLQ-LPFCGPNFIDHFICDLFPLLKLA 187
Cdd:cd15948   87 MESAVLLAMAFDRYVAICNPLRYATILTNSVI-TKIGLAALARAVTLMTPLPFLLRrLPYCRSHVIAHCYCEHMAVVKLA 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 188 CTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCILI-----YARPT 261
Cdd:cd15948  166 CGDTRFNNIYGIAVALFIVGLDLMFIILSYVFILRAvLSLASKEEQLKAFGTCGSHICAILVFYTPVVLSstmhrFARHV 245
                        250       260       270
                 ....*....|....*....|....*....|...
gi 282847416 262 SPfSLEKNVFIFADVLTPLLNPVVYTFRNKEMK 294
Cdd:cd15948  246 AP-HVHILLANFYLLFPPMMNPIVYGVKTKQIR 277
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
8-294 8.02e-35

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 127.97  E-value: 8.02e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416   8 TEFVLLGLSQNPKVEKLLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYK 87
Cdd:cd15949    2 STFILLGIPGLEPLHVWISIPFCSMYLIAVLGNCTILFIIKSEPSL-HQPMYFFLSMLAIIDLVLSTSTMPKLLAIFWFS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  88 RKTISFECCMTQVFSVHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPF 167
Cdd:cd15949   81 SNEIPLHACLLQMFLIHSFSAIESGIFLAMAFDRYVAICNPLRHKTILTNTTVIRIGLAAVIRGVLYISPLPLLVRRLPW 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 168 CGPNFIDHFICDLFPLLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFSL-RTHSSEGRRKALSTCGSHITVV 246
Cdd:cd15949  161 YRTNIIAHSYCEHMAVVGLACGDVSINNHYGLTIGFLVLIMDSLFIVLSYIMILRVVqRLATSEARLKTFGTCVSHVCAI 240
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 282847416 247 VLFFVPC-----ILIYARPTSP--FSLEKNVFIfadVLTPLLNPVVYTFRNKEMK 294
Cdd:cd15949  241 LAFYVPIavsslIHRFGQNVPPptHILLANFYL---LIPPMLNPIVYGVRTKQIQ 292
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
25-293 9.31e-35

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 127.29  E-value: 9.31e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  25 LFVIFLLLYLATIGGNMTIVVTIaSSPVLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVH 104
Cdd:cd15956    3 LSLPFCFIYVLSLLGNGVLLSVV-WKEHRLHQPMFLFLAMLAATDLVLALSTAPKLLAILWFGATAISSYVCLSQMFLVH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 105 FFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLL 184
Cdd:cd15956   82 AFSAMESGVLVAMALDRFVAICNPLHYATILTLEVVAKAGLLLALRGVAIVIPFPLLVCRLSFCASHTIAHTYCEHMAVV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 185 KLACTDTHI-----FVILVFANSGSICIIIFSFLLVSYVVilfsLRTHSSEGRRKALSTCGSHITVVVLFFVPCILIY-- 257
Cdd:cd15956  162 KLACGATTVdslygLALALFIGGGDVLFIAYSYGLIVKTV----LRLPSPEARGKAFSTCSAHICVILFFYIPGLLSVlm 237
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 282847416 258 -----ARPTSPFSLEKNVFIfadVLTPLLNPVVYTFRNKEM 293
Cdd:cd15956  238 hrfghSVPSAAHVLLSNLYL---LLPPALNPIVYGIRTKQI 275
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
29-293 2.07e-31

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 118.39  E-value: 2.07e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  29 FLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVHFFSA 108
Cdd:cd15954    7 FCFMYIIAMVGNCGLLYLIWIEEAL-HRPMYYFLSMLSFTDITLCTTMVPKAMCIFWFNLKEISFNACLVQMFFVHTFTG 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 109 VEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLLKLAC 188
Cdd:cd15954   86 MESGVLMLMALDRYVAICYPLRYATILTNPVITKAGLATFLRGVMLIIPFPLLTKRLPYCRGNFIPHTYCDHMSVVKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 189 TDTHIFVILVFANSGSICIIIFSFLLVSYVVILFSLRTHSS-EGRRKALSTCGSHITVVVLFFVPCIL-IYARPTSPFSL 266
Cdd:cd15954  166 ANIRVDAIYGLMVALLIGGFDILCISVSYAMILRAVVSLSSkEARSKAFSTCTAHICAIVITYTPAFFtFFAHRFGGHHI 245
                        250       260       270
                 ....*....|....*....|....*....|.
gi 282847416 267 EKNVFIFAD----VLTPLLNPVVYTFRNKEM 293
Cdd:cd15954  246 TPHIHIIMAnlylLLPPMMNPIVYGVKTKQI 276
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
29-293 4.52e-31

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 117.56  E-value: 4.52e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  29 FLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVHFFSA 108
Cdd:cd15955    7 FCIMFLLAVLGNCTLLIVIKRERSL-HQPMYIFLAMLAATDLGLCPCILPKMLAIFWFQLREISFNACLAQMFFIHTLQA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 109 VEVIILAAMAYDRYVAICKPLHYSSIMNRR-LCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLFPLLKLA 187
Cdd:cd15955   86 FESGILLAMALDRYVAICHPLRHSSILTPQvLLGIGVLVVVRAVVLIIPCPLLIKLRLHHFRSTVISHSYCEHMAVVKLA 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 188 CTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFSL-RTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSPFSL 266
Cdd:cd15955  166 ADDVRVNKIYGLFVAFSILGFDIIFITTSYALIFRAVfRLPQKEARLKAFNTCTAHIFVFLLFYTLAFFSFFAHRFGHHV 245
                        250       260       270
                 ....*....|....*....|....*....|.
gi 282847416 267 EKNVFIFAD----VLTPLLNPVVYTFRNKEM 293
Cdd:cd15955  246 APYVHILLSnlylLVPPVLNPIVYGVKTKQI 276
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
39-286 8.29e-25

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 100.45  E-value: 8.29e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416   39 GNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIID-LFYKRKTISFECCMTQVFSVHFFSAVEVIILAAM 117
Cdd:pfam00001   1 GNLLVILVILRNKKL-RTPTNIFLLNLAVADLLFSLLTLPFWLVYyLNHGDWPFGSALCKIVGALFVVNGYASILLLTAI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  118 AYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNfidHFICDLFPLLKLACTDTHIFVIL 197
Cdd:pfam00001  80 SIDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVPEGN---VTVCFIDFPEDLSKPVSYTLLIS 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  198 VFANSGSICIIIFSFLLVSYVVILFSLRTHSSEG---RRKALSTCGSHITVVVLFFVPCILIYARPTSPFSLEKN----- 269
Cdd:pfam00001 157 VLGFLLPLLVILVCYTLIIRTLRKSASKQKSSERtqrRRKALKTLAVVVVVFILCWLPYHIVNLLDSLALDCELSrlldk 236
                         250       260
                  ....*....|....*....|
gi 282847416  270 ---VFIFADVLTPLLNPVVY 286
Cdd:pfam00001 237 alsVTLWLAYVNSCLNPIIY 256
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
25-290 1.11e-18

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 83.88  E-value: 1.11e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  25 LFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVH 104
Cdd:cd00637    1 LAVLYILIFVVGLVGNLLVILVILRNR-RLRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQS 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 105 FFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLfpll 184
Cdd:cd00637   80 VSLLASILTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLLGWGVYDYGGYCCCCLCWPDL---- 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 185 klacTDTHIFVILVFAnsgSICIIIFSFLLVSYVVILFSLRTHSSEGRRKALSTCGSH------------ITVVVLFFV- 251
Cdd:cd00637  156 ----TLSKAYTIFLFV---LLFLLPLLVIIVCYVRIFRKLRRHRRRIRSSSSNSSRRRrrrrerkvtktlLIVVVVFLLc 228
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 282847416 252 --P---CILIYARPTSPFSLEKNVFIFADVLT---PLLNPVVYTFRN 290
Cdd:cd00637  229 wlPyfiLLLLDVFGPDPSPLPRILYFLALLLAylnSAINPIIYAFFN 275
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
24-297 3.53e-14

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 71.05  E-value: 3.53e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLLgSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd14967    1 LLAVFLSLIILVTVFGNLLVILAVYRNRRLR-TVTNYFIVSLAVADLLVALLVMPFSAVYTLLGYWPFGPVLCRFWIALD 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTlqlPFCGPNFIDHFICDLFPL 183
Cdd:cd14967   80 VLCCTASILNLCAISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISLPPLVGW---RDETQPSVVDCECEFTPN 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 lklactDTHIFVILVFAnsgsiCIIIFSFLLVSYVVILFSLRTHssegrRKALSTcgshITVVVLFFVPC--------IL 255
Cdd:cd14967  157 ------KIYVLVSSVIS-----FFIPLLIMIVLYARIFRVARRE-----LKAAKT----LAIIVGAFLLCwlpffiiyLV 216
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 282847416 256 IYARPTSPFSLEKN-VFIFADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd14967  217 SAFCPPDCVPPILYaVFFWLGYLNSALNPIIYALFNRDFRRAF 259
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
27-297 1.02e-09

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 58.37  E-value: 1.02e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  27 VIFLLLYLATIGGNMTIVVTIASSPVLLgSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVHFF 106
Cdd:cd14969    5 VYLSLIGVLGVVLNGLVIIVFLKKKKLR-TPLNLFLLNLALADLLMSVVGYPLSFYSNLSGRWSFGDPGCVIYGFAVTFL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 107 SAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLcGILVGIAFAGGFLHSIIQII----FTLQLPF--CGPNFIDHFICDL 180
Cdd:cd14969   84 GLVSISTLAALAFERYLVIVRPLKAFRLSKRRA-LILIAFIWLYGLFWALPPLFgwssYVPEGGGtsCSVDWYSKDPNSL 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 181 fpllklactdTHIFVILVFANSGSICIIIFsfllvSYVVILFSLRTHSSEGRRKALSTCGS-----------HITVVVLF 249
Cdd:cd14969  163 ----------SYIVSLFVFCFFLPLAIIIF-----CYYKIYRTLRKMSKRAARRKNSAITKrtkkaekkvakMVLVMIVA 227
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 282847416 250 FVPCILIYARPTSPFSLEKNVFI--FADVLTPLL-------NPVVYTFRNKEMKNAI 297
Cdd:cd14969  228 FLIAWTPYAVVSLYVSFGGESTIppLLATIPALFaksstiyNPIIYVFMNKQFRRAL 284
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
27-296 1.59e-09

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 57.69  E-value: 1.59e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  27 VIFLLLYLATIGGNMTIVVTIASSPVLLgSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVHFF 106
Cdd:cd14972    3 VVAIVLGVFIVVENSLVLAAIIKNRRLH-KPMYILIANLAAADLLAGIAFVFTFLSVLLVSLTPSPATWLLRKGSLVLSL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 107 SAvEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIiqiiftlqLPFCGPNFIDHFI--C-DLFPL 183
Cdd:cd14972   82 LA-SAYSLLAIAVDRYISIVHGLTYVNNVTNKRVKVLIALVWVWSVLLAL--------LPVLGWNCVLCDQesCsPLGPG 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LklacTDTHIFVILVFAnsgsicIIIFSFLLVSYVVILFSLRTHSSEGRRKALSTCGSH--------ITVVVLF--FVPC 253
Cdd:cd14972  153 L----PKSYLVLILVFF------FIALVIIVFLYVRIFWCLWRHANAIAARQEAAVPAQpstsrklaKTVVIVLgvFLVC 222
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 282847416 254 ---------ILIYARPTSPFSLEKNVFIFADVLTPLLNPVVYTFRNKEMKNA 296
Cdd:cd14972  223 wlpllillvLDVLCPSVCDIQAVFYYFLVLALLNSAINPIIYAFRLKEMRRA 274
7tmA_Vasopressin_Oxytocin cd15196
vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G ...
27-169 1.49e-07

vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) and oxytocin are synthesized in the hypothalamus and are released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320324 [Multi-domain]  Cd Length: 264  Bit Score: 51.47  E-value: 1.49e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  27 VIFLLlylaTIGGNMTIVVTIASSPVLLgSPMYFFLAFLSLLDACVSSI-VTPTMIIDLFYKRKTISFECCMT---QVFS 102
Cdd:cd15196    9 TILVL----ALFGNSCVLLVLYRRRRKL-SRMHLFILHLSVADLLVALFnVLPQLIWDITYRFYGGDLLCRLVkylQVVG 83
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 282847416 103 VHFFSAVeviiLAAMAYDRYVAICKPLHYSSIMNRRlCGILVGIAFAGGFLHSIIQ-IIFTLQLPFCG 169
Cdd:cd15196   84 MYASSYV----LVATAIDRYIAICHPLSSHRWTSRR-VHLMVAIAWVLSLLLSIPQlFIFSYQEVGSG 146
7tmA_5-HT2 cd15052
serotonin receptor subtype 2, member of the class A family of seven-transmembrane G ...
30-296 1.22e-06

serotonin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320180 [Multi-domain]  Cd Length: 262  Bit Score: 48.85  E-value: 1.22e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  30 LLLYLATIGGNMTIVVTIASSPVLLGSPMYFFLAfLSLLDACVSSIVTP-TMIIDLFYKRKTISFECCMTQVFSVHFFSA 108
Cdd:cd15052    8 LLLVIATIGGNILVCLAISLEKRLQNVTNYFLMS-LAIADLLVGLLVMPlSILTELFGGVWPLPLVLCLLWVTLDVLFCT 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 109 VEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPfcgPNFIDHFICDLFpllklac 188
Cdd:cd15052   87 ASIMHLCTISLDRYMAIRYPLRTRRNKSRTTVFLKIAIVWLISIGISSPIPVLGIIDT---TNVLNNGTCVLF------- 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 189 tdTHIFVIlvfanSGSICIIIFSFLLvsyVVILFSLRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPTSPFSLEK 268
Cdd:cd15052  157 --NPNFVI-----YGSIVAFFIPLLI---MVVTYALTIRLLSNEQKASKVLGIVFAVFVICWCPFFITNILTGLCEECNC 226
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 282847416 269 N-------VFIFADVLTPLLNPVVYTFRNKEMKNA 296
Cdd:cd15052  227 RispwllsVFVWLGYVSSTINPIIYTIFNKTFRRA 261
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
23-241 1.30e-06

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 48.87  E-value: 1.30e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  23 KLLFVIFLLLYLATIGGNMTIVVTIASSPVLLgSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFS 102
Cdd:cd15083    1 YVLGIFILIIGLIGVVGNGLVIYAFCRFKSLR-TPANYLIINLAISDFLMCILNCPLMVISSFSGRWIFGKTGCDMYGFS 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 103 VHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAfaggFLHSIIQIIftlqLPFCGPN--FIDHF--IC 178
Cdd:cd15083   80 GGLFGIMSINTLAAIAVDRYLVITRPMKASVRISHRRALIVIAVV----WLYSLLWVL----PPLFGWSryVLEGLltSC 151
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 282847416 179 DLFPLLKLACTDTHIFVILVFANSGSICIIIFsfllvSYVVILFSLRTHSSEGRRKALSTCGS 241
Cdd:cd15083  152 SFDYLSRDDANRSYVICLLIFGFVLPLLIIIY-----CYSFIFRAVRRHEKAMKEMAKRFSKS 209
7tmA_GPR119_R_insulinotropic_receptor cd15104
G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member ...
27-296 1.91e-06

G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR119 is activated by oleoylethanolamide (OEA), a naturally occurring bioactive lipid with hypophagic and anti-obesity effects. Immunohistochemistry and double-immunofluorescence studies revealed the predominant GPR119 localization in pancreatic polypeptide (PP)-cells of islets. In addition, GPR119 expression is elevated in islets of obese hyperglycemic mice as compared to control islets, suggesting a possible involvement of this receptor in the development of obesity and diabetes. GPR119 has a significant sequence similarity with the members of the endothelial differentiation gene family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320232 [Multi-domain]  Cd Length: 283  Bit Score: 48.52  E-value: 1.91e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  27 VIFLLLYLATIGGNMTIVVTIASSPVLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYK-RKTISFECCMTQVFsVHF 105
Cdd:cd15104    4 VILAVLSPLIITGNLLVIVALLKLIRKKDTKSNCFLLNLAIADFLVGLAIPGLATDELLSDgENTQKVLCLLRMCF-VIT 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 106 FSAVEVIILAAMAYDRYVAICKPLHYSSIMNrrlcGILVGIAFAGGFLHSIiqIIFTLQLPFCGPNFIDHF-ICDLFPLL 184
Cdd:cd15104   83 SCAASVLSLAAIAFDRYLALKQPLRYKQIMT----GKSAGALIAGLWLYSG--LIGFLPLISPQFQQTSYKgKCSFFAAF 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 185 KLactdtHIFVILVFANSGSICIIIFSFllvsYVVILFSLRTHSSEGRR------------------KALSTCGSHITVV 246
Cdd:cd15104  157 HP-----RVLLVLSCMVFFPALLLFVFC----YCDILKIARVHSRAIYKvehalarqihprrtlsdfKAARTVAVLIGCF 227
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 282847416 247 VLFFVP---CILIYARPTS--PFSLEKNVFIFADVLTPLLNPVVYTFRNKEMKNA 296
Cdd:cd15104  228 LLSWLPfqiTGLVQALCDEckLYDVLEDYLWLLGLCNSLLNPWIYAFWQKEVRRA 282
7tmA_tyramine_R-like cd15061
tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
24-296 6.04e-06

tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine-specific receptors and similar proteins found in insects and other invertebrates. These tyramine receptors form a distinct receptor family that is phylogenetically different from the other tyramine/octopamine receptors which also found in invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320189 [Multi-domain]  Cd Length: 256  Bit Score: 46.58  E-value: 6.04e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLLGSPmYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15061    1 ILISFLILAIIFTIFGNLLVILAVATTRRLRTIT-NCYIVSLATADLLVGVLVLPLAIIRQLLGYWPLGSHLCDFWISLD 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFlhsiiqiiFTLQLPFCGPNfiDHFICDLFpl 183
Cdd:cd15061   80 VLLCTASILNLCCISLDRYFAITYPLKYRTKRSRRLAITMILAVWVISL--------LITSPPLVGPS--WHGRRGLG-- 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 lKLACTDTHIFVILvfansGSICIIIFSFLLVSYVVILFSLRTHSsegRRKALSTcgshITVVVLFFVPC-------ILI 256
Cdd:cd15061  148 -SCYYTYDKGYRIY-----SSMGSFFLPLLLMLFVYLRIFRVIAK---ERKTAKT----LAIVVGCFIVCwlpffimYLI 214
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 282847416 257 YARPTSPFSLEKNVFI-FADVLTPLLNPVVYTFRNKEMKNA 296
Cdd:cd15061  215 EPFCDCQFSEALSTAFtWLGYFNSVINPFIYAFYNKDFRRA 255
7tmA_5-HT7 cd15329
serotonin receptor subtype 7, member of the class A family of seven-transmembrane G ...
24-156 1.07e-05

serotonin receptor subtype 7, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT7 receptor, one of 14 mammalian serotonin receptors, is a member of the class A of GPCRs and is activated by the neurotransmitter serotonin (5-hydroxytryptamine, 5-HT). 5-HT7 receptor mainly couples to Gs protein, which positively stimulates adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. 5-HT7 receptor is expressed in various human tissues, mainly in the brain, the lower gastrointestinal tract and in vital blood vessels including the coronary artery. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320452 [Multi-domain]  Cd Length: 260  Bit Score: 46.11  E-value: 1.07e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCmtqvfsv 103
Cdd:cd15329    2 LIGIVLLIIILGTVVGNALVIIAVCLVKKL-RTPSNYLIVSLAVSDLLVALLVMPLAIIYELSGYWPFGEILC------- 73
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVII-------LAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSI 156
Cdd:cd15329   74 DVWISFDVLLctasilnLCAISVDRYLVITRPLTYAVKRTPKRMALMIAIVWLLSALISI 133
7tmA_5-HT2A cd15304
serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G ...
27-296 7.03e-05

serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341345 [Multi-domain]  Cd Length: 267  Bit Score: 43.77  E-value: 7.03e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  27 VIFLLLYLATIGGNMTIVVTIASSPVLLGSPMYFFLAfLSLLDACVSSIVTPTMIIDLFYKRK-TISFECCMTQVFSVHF 105
Cdd:cd15304    5 LLTVIVIILTIAGNILVIMAVSLEKKLQNATNYFLMS-LAIADMLLGFLVMPVSMLTILYGYRwPLPSKLCAVWIYLDVL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 106 FSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLcgilvgiAFAGGFLHSIIQIIFTLQLPFCGpnFIDHfiCDLFPLLK 185
Cdd:cd15304   84 FSTASIMHLCAISLDRYIAIRNPIHHSRFNSRTK-------AFLKIIAVWTISVGISMPIPVFG--LQDD--SKVFKEGS 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 186 LACTDTHIFVILVFAnsgsICIIIFSFLLVSYVVILFSLRtHSSEGRRKALSTCGSHITVVVLFFVPCIL--IYARPTSP 263
Cdd:cd15304  153 CLLADENFVLIGSFV----AFFIPLTIMVITYFLTIKSLQ-QSISNEQKASKVLGIVFFLFVVMWCPFFItnVMAVICKE 227
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 282847416 264 FSLEK------NVFIFADVLTPLLNPVVYTFRNKEMKNA 296
Cdd:cd15304  228 SCNEVviggllNVFVWIGYLSSAVNPLVYTLFNKTYRSA 266
7tmA_Vasopressin-like cd14986
vasopressin receptors and its related G protein-coupled receptors, member of the class A ...
31-164 1.04e-04

vasopressin receptors and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this group form a subfamily within the class A G-protein coupled receptors (GPCRs), which includes the vasopressin and oxytocin receptors, the gonadotropin-releasing hormone receptors (GnRHRs), the neuropeptide S receptor (NPSR), and orphan GPR150. These receptors share significant sequence homology with each other, suggesting that they have a common evolutionary origin. Vasopressin, also known as arginine vasopressin or anti-diuretic hormone, is a neuropeptide synthesized in the hypothalamus. The actions of vasopressin are mediated by the interaction of this hormone with three tissue-specific subtypes: V1AR, V1BR, and V2R. Although vasopressin differs from oxytocin by only two amino acids, they have divergent physiological functions. Vasopressin is involved in regulating osmotic and cardiovascular homeostasis, whereas oxytocin plays an important role in the uterus during childbirth and in lactation. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR has also been associated with asthma and allergy. GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors.


Pssm-ID: 320117 [Multi-domain]  Cd Length: 295  Bit Score: 43.13  E-value: 1.04e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  31 LLYLATIGGNMTIVVTIASSPVLLgSPMYFFLAFLSLLDACVSSI-VTPTMIIDLFYKRKTISFECCMT---QVFSVHFF 106
Cdd:cd14986    9 VLFVFTLVGNGLVILVLRRKRKKR-SRVNIFILNLAIADLVVAFFtVLTQIIWEATGEWVAGDVLCRIVkylQVVGLFAS 87
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 282847416 107 SavevIILAAMAYDRYVAICKPLhySSIMNRRLCGILVGIAFAGGFLHSIIQ-IIFTLQ 164
Cdd:cd14986   88 T----YILVSMSLDRYQAIVKPM--SSLKPRKRARLMIVVAWVLSFLFSIPQlVIFVER 140
7tmA_5-HT2B cd15306
serotonin receptor subtype 2B, member of the class A family of seven-transmembrane G ...
27-299 1.11e-04

serotonin receptor subtype 2B, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341347 [Multi-domain]  Cd Length: 277  Bit Score: 42.90  E-value: 1.11e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  27 VIFLLLYLATIGGNMTIVVTIASSPVLLGSPMYFFLAfLSLLDACVSSIVTPTMIIDLFYKRKTISFEC-CMTQVFSVHF 105
Cdd:cd15306    5 LLILMVIIPTIGGNILVILAVSLEKKLQYATNYFLMS-LAVADLLVGLFVMPIALLTILFEAMWPLPLVlCPIWLFLDVL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 106 FSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFaggflhsIIQIIFTLQLPFCG----PNFIDHFICDLf 181
Cdd:cd15306   84 FSTASIMHLCAISLDRYIAIKKPIQASQYNSRATAFIKITVVW-------LISIGIAIPVPIKGietdVDNPNNITCVL- 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 182 pllklactDTHIFVILVFANSGSICIIIFSFLLVSYVVILFSLRTHSSEGRRKALSTCGSHITVVVLFFVPCILIYARPT 261
Cdd:cd15306  156 --------TKERFGDFILFGSLAAFFTPLAIMIVTYFLTIHALRKQTITNEQRASKVLGIVFFLFLLMWCPFFITNITSV 227
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 282847416 262 SPFSLEKNV-------FIFADVLTPLLNPVVYTFRNKEMKNAIRK 299
Cdd:cd15306  228 LCDSCNQTTlqmlmeiFVWIGYVSSGVNPLVYTLFNKTFRDAFGR 272
7tmA_CB2 cd15341
cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G ...
27-297 1.98e-04

cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320463 [Multi-domain]  Cd Length: 279  Bit Score: 42.13  E-value: 1.98e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  27 VIFLLLYLATIGGNMTIVVTIASSPVLLGSPMYFFLAFLSLLDAcVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVHFF 106
Cdd:cd15341    5 VLCTLCGLLCILENVAVLYLILSSPKLRRKPSYLFIGSLALADF-LASVVFACSFVDFHVFHGVDSSAIFLLKLGGVTMS 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 107 SAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFaggflhsiIQIIFTLQLPFCGPNF--IDHFICDLFPLL 184
Cdd:cd15341   84 FTASLGSLLLMAFDRYVCIYYPSEYKALVTRKRALVALAVMW--------VLTALIAYLPLMGWNCcpLNSPCSELFPLI 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 185 KLACTDTHIFVIlvfansgsicIIIFSFLLVSYVVILFSLRTH--------SSEGRRKA--------LSTCGSHITVVVL 248
Cdd:cd15341  156 PNDYLLSWLLLV----------AILLSGIIYTYGHVLWKAHKHvvymekhqDQQGPGNArmrldvrlAKTLGLVLAVLLI 225
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 282847416 249 FFVP--CILIYARPTSPFSLEKNVFIFADVL---TPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15341  226 CWSPvlALMMHSLFTSLSDHIKKAFAFCSTLclvNSMVNPIIYALRSRELRSSL 279
7tmA_Ap5-HTB1-like cd15065
serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of ...
24-147 2.10e-04

serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes Aplysia californica serotonin receptors Ap5-HTB1 and Ap5-HTB2, and similar proteins from bilateria including insects, mollusks, annelids, and worms. Ap5-HTB1 is one of the several different receptors for 5-hydroxytryptamine (5HT, serotonin). In Aplysia, serotonin plays important roles in a variety of behavioral and physiological processes mediated by the central nervous system. These include circadian clock, feeding, locomotor movement, cognition and memory, synaptic growth and synaptic plasticity. Both Ap5-HTB1 and Ap5-HTB2 receptors are coupled to G-proteins that stimulate phospholipase C, leading to the activation of phosphoinositide metabolism. Ap5-HTB1 is expressed in the reproductive system, whereas Ap5-HTB2 is expressed in the central nervous system.


Pssm-ID: 320193 [Multi-domain]  Cd Length: 300  Bit Score: 42.34  E-value: 2.10e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIV-TPTMIIDLFYKRKTISFECCMTQVFS 102
Cdd:cd15065    1 LIGIFLSLIIVLAIFGNVLVCLAIFTDRRL-RKKSNLFIVSLAVADLLVALLVmTFAVVNDLLGYWLFGETFCNIWISFD 79
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 282847416 103 VhFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLcgILVGIA 147
Cdd:cd15065   80 V-MCSTASILNLCAISLDRYIHIKKPLKYERWMTTRR--ALVVIA 121
7tmA_MC4R cd15353
melanocortin receptor subtype 4, member of the class A family of seven-transmembrane G ...
28-294 2.26e-04

melanocortin receptor subtype 4, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320475 [Multi-domain]  Cd Length: 269  Bit Score: 42.20  E-value: 2.26e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  28 IFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVS-SIVTPTMIIDLFYKRKT--ISFECCMTQVFSVH 104
Cdd:cd15353    6 VFVTLGIVSLLENILVIAAIAKNKNL-HSPMYFFICSLAVADMLVSvSNGSETVVITLLNGNDTdaQSFTVNIDNVIDSV 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 105 FFSAVEVII--LAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQlpfcgpnfidhficdlfp 182
Cdd:cd15353   85 ICSSLLASIcsLLSIAVDRYFTIFYALQYHNIMTVRRAGVIITCIWTACTVSGVLFIIYSDS------------------ 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 183 LLKLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFSLRTHSSEGRRKALSTCGSHITVVVL----FFVPCILIYA 258
Cdd:cd15353  147 SVVIICLISMFFTMLALMASLYVHMFLLARLHIKRIAVLPGTGPIRQGANMKGAITLTILLGVFVVcwapFFLHLIFYIS 226
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 282847416 259 RPTSPFSL----EKNVFIFADVLTPLLNPVVYTFRNKEMK 294
Cdd:cd15353  227 CPRNPYCVcfmsHFNMYLILIMCNSVIDPLIYAFRSQELR 266
7tmA_V1aR cd15385
vasopressin receptor subtype 1A, member of the class A family of seven-transmembrane G ...
23-163 2.35e-04

vasopressin receptor subtype 1A, member of the class A family of seven-transmembrane G protein-coupled receptors; V1a-type receptor is a G(q/11)-coupled receptor that mediates blood vessel constriction. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320507 [Multi-domain]  Cd Length: 301  Bit Score: 42.12  E-value: 2.35e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  23 KLLFVIFLLLYLATIGGNMTIVVTIASSPVLLgSPMYFFLAFLSLLDACVSSI-VTPTMIIDLFYKRKTISFECCMT--- 98
Cdd:cd15385    1 KLEIAVLAVIFAVAVIGNSSVLLALYKTKKKA-SRMHLFIKHLSLADLVVAFFqVLPQLCWDITYRFYGPDFLCRIVkhl 79
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 282847416  99 QVFSVhFFSAvevIILAAMAYDRYVAICKPLHYSSIMNRRlCGILVGIAFAGGFLHSIIQ-IIFTL 163
Cdd:cd15385   80 QVLGM-FAST---YMLVMMTADRYIAICHPLKTLQQPTKR-SYLMIGSAWALSFILSTPQyFIFSL 140
7tmA_DmOct-betaAR-like cd15066
Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar ...
28-159 2.42e-04

Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar receptors in bilateria; member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila beta-adrenergic-like octopamine receptors and similar proteins. The biogenic amine octopamine is the invertebrate equivalent of vertebrate adrenergic neurotransmitters and exerts its effects through different G protein-coupled receptor types. Insect octopamine receptors are involved in the modulation of carbohydrate metabolism, muscular tension, cognition and memory. The activation of octopamine receptors mediating these actions leads to an increase in adenylate cyclase activity, thereby increasing cAMP levels. In Drosophila melanogaster, three subgroups have been classified on the basis of their structural homology and functional equivalents with vertebrate beta-adrenergic receptors: DmOctBeta1R, DmOctBeta2R, and DmOctBeta3R.


Pssm-ID: 320194 [Multi-domain]  Cd Length: 265  Bit Score: 41.98  E-value: 2.42e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  28 IFLLLYLATIGGNMTIVVTIASSPVLLGSPMYFF--LAFLSLLDACVSSIVTPTMIIdlFYKRKTISFECCMTQVFSVhF 105
Cdd:cd15066    5 AMTLIILAAIFGNLLVIISVMRHRKLRVITNYFVvsLAMADMLVALCAMTFNASVEI--TGRWMFGYFMCDVWNSLDV-Y 81
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 282847416 106 FSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQI 159
Cdd:cd15066   82 FSTASILHLCCISVDRYYAIVQPLEYPSKMTKRRVAIMLANVWISPALISFLPI 135
7tmA_MCR cd15103
melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
28-296 2.52e-04

melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320231 [Multi-domain]  Cd Length: 270  Bit Score: 42.09  E-value: 2.52e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  28 IFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVS-SIVTPTMIIDLF---YKRKTISFECCMTQVFSV 103
Cdd:cd15103    6 VFLTLGIVSLLENILVILAIAKNKNL-HSPMYFFICSLAVADMLVSvSNALETIVIILLnngYLVPRDSFEQHIDNVIDS 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVII--LAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFcgpnfidhficdlf 181
Cdd:cd15103   85 MICSSLLASIcsLLAIAVDRYITIFYALRYHSIMTVRRAGVIITAIWVFCTVCGILFIIYSDSVPV-------------- 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 182 pllkLACTDTHIFVILVFANSGSICIIIFSFLLVSYVVILFSLRTHSSEGRRKALSTCGSHITVVVL----FFVPCILIY 257
Cdd:cd15103  151 ----IICLISMFFAMLVLMASLYVHMFLLARSHVKKIAALPGQRSTRQRANMKGAVTLTILLGVFIFcwapFFLHLTLMI 226
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 282847416 258 ARPTSP----FSLEKNVFIFADVLTPLLNPVVYTFRNKEMKNA 296
Cdd:cd15103  227 SCPSNPycacYMSHFNVYLILIMCNSVIDPLIYAFRSQELRKT 269
7tmA_ETH-R cd14997
ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G ...
24-255 2.64e-04

ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the ecdysis-triggering hormone receptors found in insects, which are members of the class A family of seven-transmembrane G-protein coupled receptors. Ecdysis-triggering hormones are vital regulatory signals that govern the stereotypic physiological sequence leading to cuticle shedding in insects. Thus, the ETH signaling system has been a target for the design of more sophisticated insect-selective pest control strategies. Two subtypes of ecdysis-triggering hormone receptor were identified in Drosophila melanogaster. Blood-borne ecdysis-triggering hormone (ETH) activates the behavioral sequence through direct actions on the central nervous system. In insects, ecdysis is thought to be controlled by the interaction between peptide hormones; in particular between ecdysis-triggering hormone (ETH) from the periphery and eclosion hormone (EH) and crustacean cardioactive peptide (CCAP) from the central nervous system. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320128 [Multi-domain]  Cd Length: 294  Bit Score: 41.89  E-value: 2.64e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLLgSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTI--SFECCMTQVF 101
Cdd:cd14997    2 LVSVVYGVIFVVGVLGNVLVGIVVWKNKDMR-TPTNIFLVNLSVADLLVLLVCMPVALVETWAREPWLlgEFMCKLVPFV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 102 SVHFFSAVEVIILAaMAYDRYVAICKPLH--YSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDhfICD 179
Cdd:cd14997   81 ELTVAHASVLTILA-ISFERYYAICHPLQakYVCTKRRALVIIALIWLLALLTSSPVLFITEFKEEDFNDGTPVA--VCR 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 180 LfPLLKLACTDTHIFVILVFAnsgsicIIIFSFLLVSYVVILFSLRTHSS----EGRRKALSTCGSH-------ITVVVL 248
Cdd:cd14997  158 T-PADTFWKVAYILSTIVVFF------VVPLAILSGLYSVICRRLVGHPAlesrRADAANRHTLRSRrqvvymlITVVVL 230

                 ....*..
gi 282847416 249 FFVpCIL 255
Cdd:cd14997  231 FFV-CLL 236
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
27-225 2.67e-04

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 41.85  E-value: 2.67e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  27 VIFLLLYLATIGGNMTIVVTIASSPVLlgSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYK-----RKTISFECCMTQVF 101
Cdd:cd14978    5 YVLPVICIFGIIGNILNLVVLTRKSMR--SSTNVYLAALAVSDILVLLSALPLFLLPYIADysssfLSYFYAYFLPYIYP 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 102 SVHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNFIDHFICDLF 181
Cdd:cd14978   83 LANTFQTASVWLTVALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNLPRFFEYEVVECENCNNNSYYYVIPT 162
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 282847416 182 PLLKLACTdthIFVILVFANSGSICIIIFSFLLVSYVVILFSLR 225
Cdd:cd14978  163 LLRQNETY---LLKYYFWLYAIFVVLLPFILLLILNILLIRALR 203
7tmA_TAAR2_3_4 cd15312
trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family ...
25-155 2.96e-04

trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; TAAR2, TAAR3, and TAAR4 are among the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320437 [Multi-domain]  Cd Length: 289  Bit Score: 41.96  E-value: 2.96e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  25 LFVIFLLLYLATIGGNMTIVVTIaSSPVLLGSPMYFFLAFLSLLDACVSSIVTPTMII----------DLFYKrktISFE 94
Cdd:cd15312    3 MYLFMAGAILLTVFGNLMVIISI-SHFKQLHSPTNFLILSLAITDFLLGFLVMPYSMVrsvescwyfgDLFCK---IHSS 78
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 282847416  95 CCMTqvfsvhfFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHS 155
Cdd:cd15312   79 LDMM-------LSTTSIFHLCFIAVDRYYAVCDPLHYRTKITTPVIKVFLVISWSVPCLFA 132
7tmA_OT_R cd15387
oxytocin receptor, member of the class A family of seven-transmembrane G protein-coupled ...
20-164 3.63e-04

oxytocin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Oxytocin is a peptide of nine amino acids synthesized in the hypothalamus and is released from the posterior pituitary gland. Oxytocin plays an important role in sexual reproduction of both sexes and is structurally very similar to vasopressin. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320509 [Multi-domain]  Cd Length: 297  Bit Score: 41.73  E-value: 3.63e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  20 KVEKLLFVIFLLLYLAtigGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSI-VTPTMIIDLFYKRKTISFECCMT 98
Cdd:cd15387    1 KVEVTVLALILFLALT---GNICVLLAIHTTR-HKHSRMYFFMKHLSIADLVVAVFqVLPQLIWDITFRFYGPDFLCRLV 76
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 282847416  99 QVFS-VHFFSAVEVIILaaMAYDRYVAICKPLHYssiMNRRLCGILVGIAFAGGFLHSIIQI-IFTLQ 164
Cdd:cd15387   77 KYLQvVGMFASTYMLLL--MSIDRCLAICQPLRS---LHRRSDRVYVLFSWLLSLVFSIPQVhIFSLR 139
7tmA_Pinopsin cd15084
non-visual pinopsins, member of the class A family of seven-transmembrane G protein-coupled ...
30-300 3.65e-04

non-visual pinopsins, member of the class A family of seven-transmembrane G protein-coupled receptors; Pinopsins are found in the pineal organ of birds, reptiles and amphibians, but are absent from teleosts and mammals. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Pinopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320212 [Multi-domain]  Cd Length: 295  Bit Score: 41.39  E-value: 3.65e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  30 LLLYLATIGGNMTIVVTIASSPvlLGSPMYFFLAFLSLLDACV----SSIVTPTMIIDLFYKRKTIsfecCMTQVFSVHF 105
Cdd:cd15084   19 MVVALASFVNGLVIVVSIKYKK--LRSPLNYILVNLAVADLLVtlfgSSVSFSNNIVGFFVFGKTM----CEFEGFMVSL 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 106 FSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRlcgILVGIAFAGGFlhsiiQIIFTLQLPF-------------CGPNF 172
Cdd:cd15084   93 TGIVGLWSLAILAFERYLVICKPMGDFRFQQRH---AVSGCAFTWGW-----SLLWTSPPLFgwssyvpeglrtsCGPNW 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 173 IdhficdlfpllkLACTDTHIFVILVFANsgsiCIII-FSFLLVSYVVILFSLRT-----HSSEGRRKALSTCGSHITVV 246
Cdd:cd15084  165 Y------------TGGTNNNSYILALFVT----CFALpLSTIIFSYSNLLLTLRAvaaqqKESETTQRAEKEVTRMVIAM 228
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 282847416 247 VLFFVPCILIYARPTSPFSLEKNVFI----------FADVLTpLLNPVVYTFRNKEMKNAIRKM 300
Cdd:cd15084  229 VMAFLICWLPYATFAMVVATNKDVVIqptlaslpsyFSKTAT-VYNPIIYVFMNKQFRSCLLEL 291
7tmA_Parietopsin cd15085
non-visual parietopsins, member of the class A family of seven-transmembrane G protein-coupled ...
24-146 3.84e-04

non-visual parietopsins, member of the class A family of seven-transmembrane G protein-coupled receptors; Parietopsin is a non-visual green light-sensitive opsin that was initially identified in the parietal eye of lizards. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Parietopsin belongs to the class A of the G protein-coupled receptors and shows strong homology to the vertebrate visual opsins.


Pssm-ID: 320213 [Multi-domain]  Cd Length: 280  Bit Score: 41.38  E-value: 3.84e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLlgSPMYFFLAFLSLLD----ACVSSIVTPTMIIDLFYKRKTIsfecCMTQ 99
Cdd:cd15085    3 LSFLMFLNATFSIFNNVLVIAVTLKNPQLR--NPINIFILNLSFSDlmmaLCGTTIVTVTNYEGYFYLGDAF----CIFQ 76
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 282847416 100 VFSVHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGI 146
Cdd:cd15085   77 GFAVNYFGIVSLWSLTLLAYERYNVVCKPMGGLKLSTKRGYQGLLFI 123
7tmA_TAAR5-like cd15317
trace amine-associated receptor 5 and similar receptors, member of the class A family of ...
24-147 4.56e-04

trace amine-associated receptor 5 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR5, TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified trace amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320440 [Multi-domain]  Cd Length: 290  Bit Score: 41.28  E-value: 4.56e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIaSSPVLLGSPMYFFLAFLSLLDACVSSIVTPTMII----------DLFYKRKT-IS 92
Cdd:cd15317    2 IIYIVLVLAMLITVSGNLVVIISI-SHFKQLHSPTNMLVLSLATADFLLGLCVMPFSMIrtvetcwyfgDLFCKFHTgLD 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 282847416  93 FECCMTQVFSVHFfsaveviilaaMAYDRYVAICKPLHYSSIMNRRLCGILVGIA 147
Cdd:cd15317   81 LLLCTTSIFHLCF-----------IAIDRYYAVCDPLRYPSKITVQVAWRFIAIG 124
7tmA_5-HT2C cd15305
serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G ...
27-296 5.22e-04

serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341346 [Multi-domain]  Cd Length: 275  Bit Score: 41.04  E-value: 5.22e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  27 VIFLLLYLATIGGNMTIVVTIaSSPVLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRK-TISFECCMTQVFSVHF 105
Cdd:cd15305    5 LLILIIIILTIGGNILVIMAV-SLEKKLQNATNFFLMSLAVADMLVGILVMPVSLIAILYDYAwPLPRYLCPIWISLDVL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 106 FSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAggflhsiIQIIFTLQLPFCG----PNFIDHFICDLF 181
Cdd:cd15305   84 FSTASIMHLCAISLDRYVAIRNPIEHSRFNSRTKAMMKIAAVWT-------ISIGISMPIPVIGlqddEKVFVNGTCVLN 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 182 -PLLKLACTDTHIFVILVfansgsicIIIFSFLLVSYVVilfsLRTHSSEGRRKALSTCGSHITVVVL----FFVPCIL- 255
Cdd:cd15305  157 dENFVLIGSFVAFFIPLI--------IMVITYCLTIQVL----QRQQAINNERRASKVLGIVFFLFLImwcpFFITNILs 224
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 282847416 256 -IYARPTSPFSLEK--NVFIFADVLTPLLNPVVYTFRNKEMKNA 296
Cdd:cd15305  225 vLCKEACDQKLMEEllNVFVWVGYVSSGINPLVYTLFNKTYRRA 268
7tmA_AKHR cd15382
adipokinetic hormone receptor, member of the class A family of seven-transmembrane G ...
26-286 6.26e-04

adipokinetic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Adipokinetic hormone (AKH) is a lipid-mobilizing hormone that is involved in control of insect metabolism. Generally, AKH behaves as a typical stress hormone by mobilizing lipids, carbohydrates and/or certain amino acids such as proline. Thus, it utilizes the body's energy reserves to fight the immediate stress problems and subdue processes that are less important. Although AKH is known to responsible for regulating the energy metabolism during insect flight, it is also found in insects that have lost its functional wings and predominantly walk for their locomotion. AKH is structurally related to the mammalian gonadotropin-releasing hormone (GnRH) and they share a common ancestor. Both GnRH and AKH receptors are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320504 [Multi-domain]  Cd Length: 298  Bit Score: 40.76  E-value: 6.26e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  26 FVIFLLLYLATIGGNMTIVVTIASSPVLLGSPMYFFLAFLSLLDACVSSIVTPTMIIdlfyKRKTIS-----FECCMTQV 100
Cdd:cd15382    4 IIVYSVLFLIAAVGNLTVLLILLRNRRRKRSRVNILLMHLAIADLLVTFIMMPLEIG----WAATVAwlagdFLCRLMLF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 101 FSVhFFSAVEVIILAAMAYDRYVAICKPLhySSIMNRRLCGILVGIAFAGGFLHSIIQ-IIFTLQLPFCGPNFIDHFICD 179
Cdd:cd15382   80 FRA-FGLYLSSFVLVCISLDRYFAILKPL--RLSDARRRGRIMLAVAWVISFLCSIPQsFIFHVESHPCVTWFSQCVTFN 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 180 LFPllklacTDTHIFVILVFaNSGSICIIIFSFLLVSYVVILFSLRTHSSEGRRKALSTCGS---------HIT------ 244
Cdd:cd15382  157 FFP------SHDHELAYNIF-NMITMYALPLIIIVFCYSLILCEISRKSKEKKEDVSEKSSSvrlrrssvgLLErarsrt 229
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 282847416 245 -----VVVLFFVPCILIYA---------RPTS---PFSLEKNVFIFAdVLTPLLNPVVY 286
Cdd:cd15382  230 lkmtiVIVLVFIICWTPYFimslwywfdRESAskvDPRIQKGLFLFA-VSNSCMNPIVY 287
7tmA_Beta_AR cd15058
beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane ...
24-146 6.38e-04

beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta adrenergic receptor (beta adrenoceptor), also known as beta AR, is activated by hormone adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate, as well as pulmonary physiology. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of beta-ARs can lead to cardiac dysfunction such as arrhythmias or heart failure. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320186 [Multi-domain]  Cd Length: 305  Bit Score: 40.90  E-value: 6.38e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLLGSPMYFFLAfLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVfSV 103
Cdd:cd15058    2 GLLLLLALIILAIVVGNLLVIIAIARTSRLQTMTNIFITS-LACADLVMGLLVVPLGATIVVTGKWQLGNFWCELWT-SV 79
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 282847416 104 HFFSAVEVI-ILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGI 146
Cdd:cd15058   80 DVLCVTASIeTLCVIAVDRYIAITRPLRYQVLLTKRRARVIVCV 123
7tmA_5-HT5 cd15328
serotonin receptor subtype 5, member of the class A family of seven-transmembrane G ...
24-296 9.57e-04

serotonin receptor subtype 5, member of the class A family of seven-transmembrane G protein-coupled receptors; 5-HT5 receptor, one of 14 mammalian 5-HT receptors, is activated by the neurotransmitter and peripheral signal mediator serotonin (also known as 5-hydroxytryptamine or 5-HT). The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/0) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320451 [Multi-domain]  Cd Length: 259  Bit Score: 39.93  E-value: 9.57e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLLGSPmYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKT----------ISF 93
Cdd:cd15328    2 LVLTLLAMLVVATFLWNLLVLVTILRVRTFHRVP-HNLVASMAVSDVLVAALVMPLSLVHELSGRRWqlgrslcqvwISF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  94 E--CCMTQVFSVhffsaveviilAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQlpfcgpn 171
Cdd:cd15328   81 DvlCCTASIWNV-----------TAIALDRYWSITRHLEYTLRTRRRISNVMIALTWALSAVISLAPLLFGWG------- 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 172 fidhficDLFPLLKLACTDTHIFVILVFANSGS----ICIIIFSFLLVsyvvilfslrTHSSEGRRKALSTCGSHITVVV 247
Cdd:cd15328  143 -------ETYSEDSEECQVSQEPSYTVFSTFGAfylpLCVVLFVYWKI----------YKAAQKEKRAALMVGILIGVFV 205
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 282847416 248 LFFVPCILiyARPTSPF------SLEKNVFIFADVLTPLLNPVVYTFRNKEMKNA 296
Cdd:cd15328  206 LCWIPFFL--TELISPLcscdipPIWKSIFLWLGYSNSFFNPLIYTAFNKNYNNA 258
7tmA_S1PR cd15102
sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G ...
23-297 9.90e-04

sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320230 [Multi-domain]  Cd Length: 270  Bit Score: 40.15  E-value: 9.90e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  23 KLLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLD----------ACVSSIVTPTMIIDLFYKRKTIS 92
Cdd:cd15102    1 GATSVVFVAICCFIVLENLLVLIAIWRHM-KFHRPMYYFLGNLALSDllagaaylanILLSGARTLRLSPAQWFLREGSM 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  93 FECCMTQVFSvhffsaveviiLAAMAYDRYVAICKPLHYSSIMNRRLCGiLVGIAFaggflhsIIQIIFTLqLPFCGPNF 172
Cdd:cd15102   80 FVALSASVFS-----------LLAIAIERHLTMAKMKPYGASKTSRVLL-LIGACW-------LISLLLGG-LPILGWNC 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 173 IDHFiCDLFPLLKLACTDTHIFVILVFANS-GSICIIIFSFLLVSYVVILFSLRTHSSEGRRKALSTcgshITVVVLFFV 251
Cdd:cd15102  140 LGAL-DACSTVLPLYSKHYVLFCVTIFAGIlAAIVALYARIYCLVRASGRKATRASASPRSLALLKT----VLIVLLVFI 214
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 282847416 252 PC--------ILIYARP--TSPFSLEKNVFIFADVLTPLLNPVVYTFRNKEMKNAI 297
Cdd:cd15102  215 ACwgplfillLLDVACPvkTCPILYKADWFLALAVLNSALNPIIYTLRSRELRRAV 270
7tmA_MC5R cd15354
melanocortin receptor subtype 5, member of the class A family of seven-transmembrane G ...
28-294 1.01e-03

melanocortin receptor subtype 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320476 [Multi-domain]  Cd Length: 270  Bit Score: 39.92  E-value: 1.01e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  28 IFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVS-SIVTPTMIIDLFYKRKTISFECCMTQVFSVhFF 106
Cdd:cd15354    6 VFLTLGIISLLENILVILAIVKNKNL-HSPMYFFVCSLAVADMLVSvSNAWETITIYLLNNRHLVIEDAFVRHIDNV-FD 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 107 SAVEVIILAAM------AYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFcgpnfidhficdl 180
Cdd:cd15354   84 SLICISVVASMcsllaiAVDRYVTIFYALRYHNIMTVRRAGIIIACIWTFCTGCGIIFILYSESTYV------------- 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 181 fpllkLACTDTHIFVILVFANSgsicIIIFSFLLV-SYVVILFSLRTHSSEGRRKALSTC-------GSHITVVVLFFVP 252
Cdd:cd15354  151 -----IICLITMFFAMLFLMVS----LYIHMFLLArTHVKRIAALPGYNSVRQRTSMKGAvtltillGIFIVCWAPFFLH 221
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 282847416 253 CILIYARPT----SPFSLEKNVFIFADVLTPLLNPVVYTFRNKEMK 294
Cdd:cd15354  222 LILMISCPQnlycVCFMSHFNMYLILIMCNSVIDPLIYAFRSQEMR 267
7tmA_5-HT2_insect-like cd15307
serotonin receptor subtype 2 from insects, member of the class A family of seven-transmembrane ...
27-300 1.11e-03

serotonin receptor subtype 2 from insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320433 [Multi-domain]  Cd Length: 279  Bit Score: 39.94  E-value: 1.11e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  27 VIFLLLYLATIGGNMTIVVTIASSPVLLGSPMYFFLAfLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSVHFF 106
Cdd:cd15307    5 LLALVLVLGTAAGNILVCLAIAWERRLQNVTNYFLMS-LAITDLMVAVLVMPLGILTLVKGHFPLSSEHCLTWICLDVLF 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 107 SAVEVIILAAMAYDRYVAICKPLHYSSIMNRRlcgilvgiafaggflHSIIQIIFTLQLPfcgpnfidhfICDLFPLLKL 186
Cdd:cd15307   84 CTASIMHLCTISVDRYLSLRYPMRFGRNKTRR---------------RVTLKIVFVWLLS----------IAMSLPLSLM 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 187 ACTDTHIFVI--------LVFANSGS-ICIII-FSFLLVSYVVILFSL-RTHSSEGR-----RKALSTCGSHITVVVLFF 250
Cdd:cd15307  139 YSKDHASVLVngtcqipdPVYKLVGSiVCFYIpLGVMLLTYCLTVRLLaRQRSRHGRiirleQKATKVLGVVFFTFVILW 218
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 282847416 251 VPCILIYARPTSPFSLEK-------NVFIFADVLTPLLNPVVYTFRNKEMKNAIRKM 300
Cdd:cd15307  219 SPFFVLNLLPTVCAECEErishwvfDVVTWLGYASSMVNPIFYTIFNKVFRQAFKKV 275
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
24-291 1.12e-03

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 39.89  E-value: 1.12e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd14993    2 VLIVLYVVVFLLALVGNSLVIAVVLRNK-HMRTVTNYFLVNLAVADLLVSLFCMPLTLLENVYRPWVFGEVLCKAVPYLQ 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPFCGPNF--IDHFIC-DL 180
Cdd:cd14993   81 GVSVSASVLTLVAISIDRYLAICYPLKARRVSTKRRARIIIVAIWVIAIIIMLPLLVVYELEEIISSEPgtITIYICtED 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 181 FPLLklacTDTHIFVILVFAnsgsICIII-FSFLLVSYVVILFSLRTHSSEGRRKALSTCGSH-------------ITVV 246
Cdd:cd14993  161 WPSP----ELRKAYNVALFV----VLYVLpLLIISVAYSLIGRRLWRRKPPGDRGSANSTSSRrilrskkkvarmlIVVV 232
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 282847416 247 VLF-------FVPCILIYARPTSPFSLEKNVFIFADVLTPL------LNPVVYTFRNK 291
Cdd:cd14993  233 VLFalswlpyYVLSILLDFGPLSSEESDENFLLILPFAQLLgysnsaINPIIYCFMSK 290
7tmA_Octopamine_R cd15063
octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G ...
24-296 1.14e-03

octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor for octopamine (OA), which functions as a neurotransmitter, neurohormone, and neuromodulator in invertebrate nervous system. Octopamine (also known as beta, 4-dihydroxyphenethylamine) is an endogenous trace amine that is highly similar to norepinephrine, but lacks a hydroxyl group, and has effects on the adrenergic and dopaminergic nervous systems. Based on the pharmacological and signaling profiles, the octopamine receptors can be classified into at least two groups: OA1 receptors elevate intracellular calcium levels in muscle, whereas OA2 receptors activate adenylate cyclase and increase cAMP production.


Pssm-ID: 320191 [Multi-domain]  Cd Length: 266  Bit Score: 39.79  E-value: 1.14e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLLGSPMYFFLAfLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15063    2 ISLLVLTFLNVLVVLGNLLVIAAVLCSRKLRTVTNLFIVS-LACADLLVGTLVLPFSAVNEVLDVWIFGHTWCQIWLAVD 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLhsiiqIIFTlqlPFCGPNFIDHFICDLFPL 183
Cdd:cd15063   81 VWMCTASILNLCAISLDRYLAITRPIRYPSLMSTKRAKCLIAGVWVLSFV-----ICFP---PLVGWNDGKDGIMDYSGS 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 --LKLACTDTHIFVILVFANSGsiciiifSFLLVSYVVILFSLRTHSSEGRR-KALSTCGSHITVVVLFFVPCILIY-AR 259
Cdd:cd15063  153 ssLPCTCELTNGRGYVIYSALG-------SFYIPMLVMLFFYFRIYRAARMEtKAAKTVAIIVGCFIFCWLPFFTVYlVR 225
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 282847416 260 PTSPFSLEK---NVFIFADVLTPLLNPVVYTFRNKEMKNA 296
Cdd:cd15063  226 AFCEDCIPPllfSVFFWLGYCNSALNPCIYALFSRDFRFA 265
7tmA_Opsin5_neuropsin cd15074
neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled ...
24-152 1.15e-03

neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropsin, also known as Opsin-5, is a photoreceptor protein expressed in the retina, brain, testes, and spinal cord. Neuropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Mammalian neuropsin activates Gi protein-mediated photo-transduction pathway in a UV-dependent manner, whereas, in non-mammalian vertebrates, neuropsin is involved in regulating the photoperiodic control of seasonal reproduction in birds such as quail. As with other opsins, it may also act as a retinal photoisomerase.


Pssm-ID: 320202 [Multi-domain]  Cd Length: 284  Bit Score: 39.95  E-value: 1.15e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLY--LATIGGNMTIVVTIASSPVLLgsPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVF 101
Cdd:cd15074    1 IIIGIYLTVIgiLSTLGNGTVLFVLYRRRSKLK--PAELLTVNLAVSDLGISVFGYPLAIISAFAHRWLFGDIGCVFYGF 78
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 282847416 102 SVHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGI-AFAGGF 152
Cdd:cd15074   79 CGFLFGCCSINTLTAISIYRYLKICHPPYGPKLSRRHVCIVIVAIwLYALFW 130
7tmA_5-HT1_5_7 cd15064
serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G ...
24-296 1.61e-03

serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes serotonin receptor subtypes 1, 5, and 7 that are activated by the neurotransmitter serotonin. The 5-HT1 and 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family. The 5-HT1 receptor subfamily includes 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as 5-HT2C receptor. The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. The 5-HT7 receptor is coupled to Gs, which positively stimulates adenylate cyclase activity, leading to increased intracellular cAMP formation and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320192 [Multi-domain]  Cd Length: 258  Bit Score: 39.23  E-value: 1.61e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIdlfykrKTISFECCMTQVFsV 103
Cdd:cd15064    2 LISVLLSLIILATILGNALVIAAILLTRKL-HTPANYLIASLAVADLLVAVLVMPLSAV------YELTGRWILGQVL-C 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVII-------LAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFtlqlpFCGPNFIDhf 176
Cdd:cd15064   74 DIWISLDVTCctasilhLCVIALDRYWAITDAVEYAHKRTPKRAAVMIALVWTLSICISLPPLFG-----WRTPDSED-- 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 177 icdlfpllKLACTDTHIFVILVFANSGsiciiifSFLLVSYVVILFSLRTHSSEGR-RKALSTCGSHITVVVL----FFV 251
Cdd:cd15064  147 --------PSECLISQDIGYTIFSTFG-------AFYIPLLLMLILYWKIYRAAAReRKAAKTLGIILGAFIVcwlpFFL 211
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 282847416 252 PCILIYARPTSPFSLE-KNVFIFADVLTPLLNPVVYTFRNKEMKNA 296
Cdd:cd15064  212 VALIVPLCSHCWIPLAlKSFFLWLGYFNSLINPLIYTFFNKDFRKA 257
7tmA_Cannabinoid_R cd15099
cannabinoid receptors, member of the class A family of seven-transmembrane G protein-coupled ...
27-296 1.69e-03

cannabinoid receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320227 [Multi-domain]  Cd Length: 281  Bit Score: 39.44  E-value: 1.69e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  27 VIFLLLYLATIGGNMTIVVTIASSPVLLGSPMYFFLAFLSLLDACVSSIVTPTMII-DLFYKRKTISFECCMTQVFSVHF 105
Cdd:cd15099    5 VLCFLAGPVTFLENILVLLTILSSTALRRRPSYLFIGSLALADMLASVIFTISFLDfHVFHQRDSRNLFLFKLGGVTMAF 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 106 FSAVEVIILAAMayDRYVAICKPLHYSSIMNRRLCGILVGIAFaggflhsIIQIIFTLqLPFCGPNF--IDHFICDLFPL 183
Cdd:cd15099   85 TASVGSLLLTAL--DRYLCIYQPSNYKLLVTRTRAKVAILLMW-------CVTIIISF-LPLMGWRCktWDSPCSRLFPY 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 184 LKlacTDTHIFVILVFAnsgsiciIIFSFLLVSYVVILFSLRTHSSE------GRRKA-----------LSTCGSHITVV 246
Cdd:cd15099  155 ID---RHYLASWTGLQL-------VLLFLIIYAYPYILWKAHRHEANmggpklGRQQVkgqarmrmdirLAKTLSLILLV 224
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 282847416 247 VL---FFVPCILIYARPTSPFSLEKNVFIFADVL---TPLLNPVVYTFRNKEMKNA 296
Cdd:cd15099  225 LAicwLPVLAFMLVDVRVTLTNKQKRMFAFCSMLclvNSCVNPIIYALRSRELRGA 280
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
105-166 2.14e-03

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 39.07  E-value: 2.14e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 282847416 105 FFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLP 166
Cdd:cd15055   82 ILTSASIFNLVLIAIDRYVAVCDPLLYPTKITIRRVKICICLCWFVSALYSSVLLYDNLNQP 143
7tmA_tyramine_octopamine_R-like cd15060
tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G ...
27-296 3.09e-03

tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine/octopamine receptors and similar proteins found in insects and other invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320188 [Multi-domain]  Cd Length: 260  Bit Score: 38.57  E-value: 3.09e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  27 VIFLLLYLA----TIGGNMTIVVTIASSPVLLGSPMYFFLAfLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFS 102
Cdd:cd15060    1 VVTTILLSViiafTIVGNILVILSVFTYRPLRIVQNFFIVS-LAVADLAVAIFVLPLNVAYFLLGKWLFGIHLCQMWLTC 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 103 VHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSIIQIIFTLQLPfcgPNFIDHFICDLfp 182
Cdd:cd15060   80 DILCCTASILNLCAIALDRYWAIHDPINYAQKRTLKRVLLMIVVVWALSALISVPPLIGWNDWP---ENFTETTPCTL-- 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 183 llklacTDTHIFVIlvFANSGSICIIIFSFLLVsYVVILFSLrthSSEgrRKALSTCGSHITVVVLFFVPCILIYA-RP- 260
Cdd:cd15060  155 ------TEEKGYVI--YSSSGSFFIPLLIMTIV-YVKIFIAT---SKE--RRAARTLGIIMGVFVVCWLPFFLMYViLPf 220
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 282847416 261 ---TSPFSLEKNVFIFADVLTPLLNPVVYTFRNKEMKNA 296
Cdd:cd15060  221 cetCSPSAKVVNFITWLGYVNSALNPVIYTIFNLDFRRA 259
7tmA_Prostanoid_R cd14981
G protein-coupled receptors for prostanoids, member of the class A family of ...
27-149 3.18e-03

G protein-coupled receptors for prostanoids, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320112 [Multi-domain]  Cd Length: 288  Bit Score: 38.77  E-value: 3.18e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  27 VIFLLLYLATIGGN-MTIVVTIASSPVLLGSPMYFFLAFLSLLDACVSSIVTPTMIIdLFYKRKTISFECCMTQVFSVH- 104
Cdd:cd14981    5 APPALMFVFGVLGNlLALIVLARSSKSHKWSVFYRLVAGLAITDLLGILLTSPVVLA-VYASNFEWDGGQPLCDYFGFMm 83
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 282847416 105 -FFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFA 149
Cdd:cd14981   84 sFFGLSSLLIVCAMAVERFLAITHPFFYNSHVKKRRARLMLGAVWA 129
7tmA_PR4-like cd15392
neuropeptide Y receptor-like found in insect and related proteins, member of the class A ...
24-129 3.35e-03

neuropeptide Y receptor-like found in insect and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a novel G protein-coupled receptor (also known as PR4 receptor) from Drosophila melanogaster, which can be activated by the members of the neuropeptide Y (NPY) family, including NPY, peptide YY (PYY) and pancreatic polypeptide (PP), when expressed in Xenopus oocytes. These homologous peptides of 36-amino acids in length contain a hairpin-like structural motif, which referred to as the pancreatic polypeptide fold, and function as gastrointestinal hormones and neurotransmitters. The PR4 receptor also shares strong sequence homology to the mammalian tachykinin receptors (NK1R, NK2R, and NK3R), whose endogenous ligands are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB), respectively. The tachykinins function as excitatory transmitters on neurons and cells in the gastrointestinal tract.


Pssm-ID: 320514 [Multi-domain]  Cd Length: 287  Bit Score: 38.50  E-value: 3.35e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYkRKTISFECCMTQVfsV 103
Cdd:cd15392    2 IIILMYSTIFVLAVGGNGLVCYIVVSYP-RMRTVTNYFIVNLALSDILMAVFCVPFSFIALLI-LQYWPFGEFMCPV--V 77
                         90       100       110
                 ....*....|....*....|....*....|
gi 282847416 104 HFFSAVEVII----LAAMAYDRYVAICKPL 129
Cdd:cd15392   78 NYLQAVSVFVsaftLVAISIDRYVAIMWPL 107
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
26-153 4.17e-03

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 38.39  E-value: 4.17e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  26 FVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTP-TMIIDLfykRKTISFECCMTQVFSVH 104
Cdd:cd14968    4 IVLEVLIAVLSVLGNVLVIWAVKLNRAL-RTVTNYFIVSLAVADILVGALAIPlAILISL---GLPTNFHGCLFMACLVL 79
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 282847416 105 FFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFL 153
Cdd:cd14968   80 VLTQSSIFSLLAIAIDRYLAIKIPLRYKSLVTGRRAWGAIAVCWVLSFL 128
7tmA_V1bR cd15386
vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G ...
27-164 4.93e-03

vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G protein-coupled receptors; The V1b receptor is specifically expressed in corticotropes of the anterior pituitary and plays a critical role in regulating the activity of hypothalamic-pituitary-adrenal axis, a key part of the neuroendocrine system that controls reactions to stress, by maintaining adrenocorticotropic hormone (ACTH) and corticosterone levels. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320508 [Multi-domain]  Cd Length: 302  Bit Score: 38.24  E-value: 4.93e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  27 VIFLLLYLATiGGNMTIVVTIASSPVLLgSPMYFFLAFLSLLDACVSSI-VTPTMIIDLFYKRKTISFECCMTQVFSVHF 105
Cdd:cd15386    6 VLAAILVVAT-AGNLAVLLAMYRMRRKM-SRMHLFVLHLALTDLVVALFqVLPQLIWEITYRFQGPDLLCRAVKYLQVLS 83
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 106 FSAvEVIILAAMAYDRYVAICKPLHYSSIMNRRLCgILVGIAFAGGFLHSIIQI-IFTLQ 164
Cdd:cd15386   84 MFA-STYMLIMMTVDRYIAVCHPLRTLQQPSRQAY-LMIGATWLLSCILSLPQVfIFSLR 141
7tmA_Opsin_Gq_invertebrates cd15337
invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled ...
37-156 5.32e-03

invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The invertebrate Gq-coupled opsin subfamily includes the arthropod and mollusc visual opsins. Like the vertebrate visual opsins, arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. The invertebrate Gq opsins are closely related to the vertebrate melanopsins, the primary photoreceptor molecules for non-visual responses to light, and the R1-R6 photoreceptors, which are the fly equivalent to the vertebrate rods. The Gq opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320459 [Multi-domain]  Cd Length: 292  Bit Score: 38.07  E-value: 5.32e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  37 IGGNmTIVVTIASSPVLLGSPMYFFLAFLSLLDACVSSIVT-PTMIIDLFYKRKTISFECCMTQVFSVHFFSAVEVIILA 115
Cdd:cd15337   15 VIGN-LLVIYLFSKTKSLRTPSNMFIINLAISDFGFSAVNGfPLKTISSFNKKWIWGKVACELYGFAGGIFGFMSITTLA 93
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 282847416 116 AMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSI 156
Cdd:cd15337   94 AISIDRYLVIAKPLEAMKKMTFKRAFIMIIIIWLWSLLWSI 134
7tmA_Dop1R2-like cd15067
dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the ...
24-296 5.59e-03

dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled dopamine 1-like receptor 2 is expressed in Drosophila heads and it shows significant sequence similarity with vertebrate and invertebrate dopamine receptors. Although the Drosophila Dop1R2 receptor does not cluster into the D1-like structural group, it does show pharmacological properties similar to D1-like receptors. As shown in vertebrate D1-like receptors, agonist stimulation of Dop1R2 activates adenylyl cyclase to increase cAMP levels and also generates a calcium signal through stimulation of phospholipase C.


Pssm-ID: 320195 [Multi-domain]  Cd Length: 262  Bit Score: 37.72  E-value: 5.59e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPvLLGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRKTI--SFECCMTQVF 101
Cdd:cd15067    1 LLGVVLSLFCLVTVAGNLLVILAVLRER-YLRTVTNYFIVSLAVADLLVGSIVMPFSILHEMTGGYWLfgRDWCDVWHSF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 102 SVhFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFaggFLHSIIQIIFTLQLPFCGPNFIDHFICdLF 181
Cdd:cd15067   80 DV-LASTASILNLCVISLDRYWAITDPISYPSRMTKRRALIMIALVW---ICSALISFPAIAWWRAVDPGPSPPNQC-LF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416 182 pllklacTDTHIFVILvfansgSICIIIFSFLLVSYVVILFSLRTHSSEgrRKALSTCGSHITVVVL----FFVPCILIY 257
Cdd:cd15067  155 -------TDDSGYLIF------SSCVSFYIPLVVMLFTYYRIYRAAAKE--QKAAKTLGIVMGVFILcwlpFFVTNILIG 219
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 282847416 258 ARPTSPFSLEKNVFIFADVLTPL---LNPVVYTFRNKEMKNA 296
Cdd:cd15067  220 FCPSNCVSNPDILFPLVTWLGYInsgMNPIIYACSSRDFRRA 261
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
24-156 5.79e-03

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 37.72  E-value: 5.79e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIDLFYKRK-TISFECCMTQVFS 102
Cdd:cd14979    2 LVTAIYVAIFVVGIVGNLLTCIVIARHKSL-RTTTNYYLFSLAVSDLLILLVGLPVELYNFWWQYPwAFGDGGCKLYYFL 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 282847416 103 VHFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAFAGGFLHSI 156
Cdd:cd14979   81 FEACTYATVLTIVALSVERYVAICHPLKAKTLVTKRRVKRFILAIWLVSILCAI 134
7tmA_photoreceptors_insect cd15079
insect photoreceptors R1-R6 and similar proteins, member of the class A family of ...
24-129 6.08e-03

insect photoreceptors R1-R6 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the insect photoreceptors and their closely related proteins. The Drosophila eye is composed of about 800 unit eyes called ommatidia, each of which contains eight photoreceptor cells (R1-R8). The six outer photoreceptors (R1-R6) function like the vertebrate rods and are responsible for motion detection in dim light and image formation. The R1-R6 photoreceptors express a blue-absorbing pigment, Rhodopsin 1(Rh1). The inner photoreceptors (R7 and R8) are considered the equivalent of the color-sensitive vertebrate cone cells, which express a range of different pigments. The R7 photoreceptors express one of two different UV absorbing pigments, either Rh3 or Rh4. Likewise, the R8 photoreceptors express either the blue absorbing pigment Rh5 or green absorbing pigment Rh6. These photoreceptors belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320207 [Multi-domain]  Cd Length: 292  Bit Score: 37.56  E-value: 6.08e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNmTIVVTIASSPVLLGSPMYFFLAFLSLLDACVSsIVTPTMIIDLFYKRKTISFECCmtQVFSV 103
Cdd:cd15079    2 LLGFIYIFLGIVSLLGN-GLVIYIFSTTKSLRTPSNMLVVNLAISDFLMM-IKMPIFIYNSFYEGWALGPLGC--QIYAF 77
                         90       100
                 ....*....|....*....|....*...
gi 282847416 104 --HFFSAVEVIILAAMAYDRYVAICKPL 129
Cdd:cd15079   78 lgSLSGIGSIWTNAAIAYDRYNVIVKPL 105
7tmA_mAChR_DM1-like cd15301
muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G ...
24-148 7.77e-03

muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes muscarinic acetylcholine receptor DM1-like from invertebrates. Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320428 [Multi-domain]  Cd Length: 270  Bit Score: 37.49  E-value: 7.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  24 LLFVIFLLLYLATIGGNMTIVVTIASSPVLLGSPMYFFLAfLSLLDACVSSIVTPTMIIDLFYKRKTISFECCMTQVFSV 103
Cdd:cd15301    2 LIVIVAAVLSLVTVGGNVMVMISFKIDKQLQTISNYFLFS-LAVADFAIGVISMPLFTVYTALGYWPLGYEVCDTWLAID 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 282847416 104 HFFSAVEVIILAAMAYDRYVAICKPLHYSSIMNRRLCGILVGIAF 148
Cdd:cd15301   81 YLASNASVLNLLIISFDRYFSVTRPLTYRARRTTKKAAVMIASAW 125
7tmA_Adenosine_R_A2B cd15069
adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G ...
27-152 8.70e-03

adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2B receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320197 [Multi-domain]  Cd Length: 294  Bit Score: 37.22  E-value: 8.70e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  27 VIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMI-IDLFYKrktISFECCMTQVFSVHF 105
Cdd:cd15069    5 ALELIIAALSVAGNVLVCAAVGTNSTL-QTPTNYFLVSLAAADVAVGLFAIPFAItISLGFC---TDFHSCLFLACFVLV 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 282847416 106 FSAVEVIILAAMAYDRYVAICKPLHYSSIMN----RRLCGILVGIAFAGGF 152
Cdd:cd15069   81 LTQSSIFSLLAVAVDRYLAIKVPLRYKSLVTgkraRGVIAVLWVLAFGIGL 131
7tmA_NPSR cd15197
neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled ...
26-161 9.91e-03

neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR is widely expressed in the brain, and its activation induces an elevation of intracellular calcium and cAMP concentrations, presumably by coupling to G(s) and G(q) proteins. Mutations in NPSR have been associated with an increased susceptibility to asthma. NPSR was originally identified as an orphan receptor GPR154 and is also known as G protein receptor for asthma susceptibility (GPRA) or vasopressin receptor-related receptor 1 (VRR1).


Pssm-ID: 320325 [Multi-domain]  Cd Length: 294  Bit Score: 37.02  E-value: 9.91e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282847416  26 FVIFLLLYLATIGGNMTIVVTIASSPVLlGSPMYFFLAFLSLLDACVSSIVTPTMIIdlfyKRKTISFECCMTQVFSVHF 105
Cdd:cd15197    4 LATLWVLFVFIVVGNSSVLFALWMRKAK-KSRMNFFITQLAIADLCVGLINVLTDII----WRITVEWRAGDFACKVIRY 78
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 282847416 106 FSAVEV----IILAAMAYDRYVAICKPLHYSSimNRRLCGILVGIAFAGGFLHSI-IQIIF 161
Cdd:cd15197   79 LQVVVTyastYVLVALSIDRYDAICHPMNFSQ--SGRQARVLICVAWILSALFSIpMLIIF 137
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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