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Conserved domains on  [gi|22128867|ref|NP_667255|]
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olfactory receptor family 56 subfamily A member 3 [Mus musculus]

Protein Classification

G protein-coupled receptor family protein( domain architecture ID 705710)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tm_GPCRs super family cl28897
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
42-307 8.39e-123

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


The actual alignment was detected with superfamily member cd15223:

Pssm-ID: 475119 [Multi-domain]  Cd Length: 279  Bit Score: 353.14  E-value: 8.39e-123
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15223  14 ALVANSLLLLIIKLERSLHQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFIHFFTAMESSILLV 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRL 201
Cdd:cd15223  94 MALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSNVIEHCYCDHMALVSLACGDTTINSI 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 202 YQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTHVAKRKVSSDVPILLN 281
Cdd:cd15223 174 YGLAVAWLIVGSDIILIFFSYALILRAVLRLASGEARSKALNTCGSHLIVILFFYTAVLVSSLTYRFGKTIPPDVHVLLS 253
                       250       260
                ....*....|....*....|....*.
gi 22128867 282 VLHHVIPAALNPIVYGVRTQEIKQGI 307
Cdd:cd15223 254 VLYILIPPALNPIIYGVRTKEIRQGF 279
 
Name Accession Description Interval E-value
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
42-307 8.39e-123

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 353.14  E-value: 8.39e-123
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15223  14 ALVANSLLLLIIKLERSLHQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFIHFFTAMESSILLV 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRL 201
Cdd:cd15223  94 MALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSNVIEHCYCDHMALVSLACGDTTINSI 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 202 YQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTHVAKRKVSSDVPILLN 281
Cdd:cd15223 174 YGLAVAWLIVGSDIILIFFSYALILRAVLRLASGEARSKALNTCGSHLIVILFFYTAVLVSSLTYRFGKTIPPDVHVLLS 253
                       250       260
                ....*....|....*....|....*.
gi 22128867 282 VLHHVIPAALNPIVYGVRTQEIKQGI 307
Cdd:cd15223 254 VLYILIPPALNPIIYGVRTKEIRQGF 279
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
46-311 5.04e-60

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 193.10  E-value: 5.04e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867    46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:pfam13853  12 NGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIMESAVLLAMAVD 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867   126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:pfam13853  92 RFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSCADIKVNNIYGLF 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867   206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTHVAKRKVSSDVPILLNVLHH 285
Cdd:pfam13853 172 VVTSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVHRFGHNVPPLLQIMMANAYL 251
                         250       260
                  ....*....|....*....|....*.
gi 22128867   286 VIPAALNPIVYGVRTQEIKQGIKKLL 311
Cdd:pfam13853 252 FFPPVLNPIVYSVKTKQIRDCVKRML 277
 
Name Accession Description Interval E-value
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
42-307 8.39e-123

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 353.14  E-value: 8.39e-123
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15223  14 ALVANSLLLLIIKLERSLHQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFIHFFTAMESSILLV 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRL 201
Cdd:cd15223  94 MALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSNVIEHCYCDHMALVSLACGDTTINSI 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 202 YQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTHVAKRKVSSDVPILLN 281
Cdd:cd15223 174 YGLAVAWLIVGSDIILIFFSYALILRAVLRLASGEARSKALNTCGSHLIVILFFYTAVLVSSLTYRFGKTIPPDVHVLLS 253
                       250       260
                ....*....|....*....|....*.
gi 22128867 282 VLHHVIPAALNPIVYGVRTQEIKQGI 307
Cdd:cd15223 254 VLYILIPPALNPIIYGVRTKEIRQGF 279
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
42-303 8.41e-97

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 286.88  E-value: 8.41e-97
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15917  14 ALLGNITILFVIKIESSLHEPMYLFLAMLAATDLVLSTSTVPKMLGIFWFNAREISFDACLAQMFFIHSFTAMESGVLLA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRL 201
Cdd:cd15917  94 MAFDRYVAICYPLRYTTILTNTVVGKIGLAILLRAVALIIPLPLLVRRLPYCGSNVISHSYCEHMAVVKLACGDTRVNSI 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 202 YQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTHVAKRKVSSDVPILLN 281
Cdd:cd15917 174 YGLFVALLIVGFDLLFIALSYVLILRAVLQLPSKEARLKALSTCGSHICVILIFYTPALFSFLTHRFGHHVPPHVHILLA 253
                       250       260
                ....*....|....*....|..
gi 22128867 282 VLHHVIPAALNPIVYGVRTQEI 303
Cdd:cd15917 254 NLYLLLPPMLNPIVYGVRTKQI 275
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
42-303 1.62e-84

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 255.68  E-value: 1.62e-84
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15221  14 ALLGNSLLLFVIVTERSLHEPMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFVHFVFVTESAILLA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRL 201
Cdd:cd15221  94 MAFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFCIVFPFVFLLKRLPYCGHNVIPHTYCEHMGIARLACADITVNIW 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 202 YQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTHVAKRKVSSDVPILLN 281
Cdd:cd15221 174 YGLTVALLTVGLDVVLIAVSYALILRAVFRLPSKDARLKALSTCGSHVCVILMFYTPAFFSFLTHRFGRHIPRHVHILLA 253
                       250       260
                ....*....|....*....|..
gi 22128867 282 VLHHVIPAALNPIVYGVRTQEI 303
Cdd:cd15221 254 NLYVLVPPMLNPIVYGVKTKQI 275
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
45-303 2.61e-79

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 242.55  E-value: 2.61e-79
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  45 ANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAF 124
Cdd:cd15953  17 GNCTILFVVGKEQSLHKPMYLLLCMLALTDLVLSTSVVPKALCIFWFNLKEITFSGCLTQMFFIHTLSIMESAVLVAMAF 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 125 DRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQF 204
Cdd:cd15953  97 DRYVAICNPLRYATILTNSRIAKLGLVGLIRGVLLILPLPLLLSRLPFCANRIIPHTYCEHMAVVKLACGDTTINRIYGL 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 205 AIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTHVAKRKVSSDVPILLNVLH 284
Cdd:cd15953 177 VVALLVVGLDLLLIALSYALIIRAVLRLSSKKARQKALNTCTAHICVILMSYTPALFSFLTHRFGQGIAPHIHIILANLY 256
                       250
                ....*....|....*....
gi 22128867 285 HVIPAALNPIVYGVRTQEI 303
Cdd:cd15953 257 LLVPPMLNPIIYGVKTKEI 275
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
42-303 1.43e-75

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 233.01  E-value: 1.43e-75
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15951  14 ALLGNFTILFIVKTEPSLHEPMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFIHSFSTMESGIFVA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRL 201
Cdd:cd15951  94 MALDRYVAICNPLRHSTILTNSVVAKIGLAVVLRGGILVSPHPFLLRRLPYCRTNIIPHTYCEHMAVVKLACADTRVSRA 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 202 YQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTHVAKRKVSSDVPILLN 281
Cdd:cd15951 174 YGLSVAFLVGGLDVIFIAVSYIQILRAVFKLPSKEARLKTFGTCGSHICVILVFYIPALFSFLTHRFGHNVPPHVHILIA 253
                       250       260
                ....*....|....*....|..
gi 22128867 282 VLHHVIPAALNPIVYGVRTQEI 303
Cdd:cd15951 254 NVYLLVPPMLNPIIYGVRTKQI 275
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
42-303 5.89e-75

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 231.15  E-value: 5.89e-75
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15950  14 ALLGNGTILLVIKLDPSLHEPMYYFLCMLAVIDLVMSTSIVPKMLSIFWLGSAEISFEACFTQMFFVHSFTAVESGVLLA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRL 201
Cdd:cd15950  94 MAFDRYVAICHPLRYSAILTSQVIAQIGLAIVLRALLFMTPLTCLVTSLPYCGSRVVPHSYCEHMAVVKLACADPRPSSL 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 202 YQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTHVAKRKVSSDVPILLN 281
Cdd:cd15950 174 YSITGSTLVVGTDSAFIAVSYGLILRAVLGLSSKEARLKAFSTCGSHVCVILLFYIPGLLSIYTQRFGQGVPPHTQVLLA 253
                       250       260
                ....*....|....*....|..
gi 22128867 282 VLHHVIPAALNPIVYGVRTQEI 303
Cdd:cd15950 254 DLYLLVPPMLNPIIYGMRTKQI 275
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
42-303 7.80e-74

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 228.42  E-value: 7.80e-74
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15952  14 ALLGNCTILFVIKTEQSLHQPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFIHTFTGMESAVLVA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRL 201
Cdd:cd15952  94 MAFDRYVAICNPLRYTTILTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCGHNIIPHTYCEHMGIAKLACASIRINII 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 202 YQ-FAIgwTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTHVAKRKVSSDVPILL 280
Cdd:cd15952 174 YGlFAI--SVLVLDVILIALSYVLILRAVFRLPSHDARLKALSTCGSHVCVILAFYTPALFSFLTHRFGHNIPRYIHILL 251
                       250       260
                ....*....|....*....|...
gi 22128867 281 NVLHHVIPAALNPIVYGVRTQEI 303
Cdd:cd15952 252 ANLYVVLPPMLNPVIYGVRTKQI 274
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
42-303 1.43e-73

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 227.77  E-value: 1.43e-73
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15222  14 ALLGNSTILFVIKTEPSLHEPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFFIHTFSFMESSVLLA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRL 201
Cdd:cd15222  94 MAFDRFVAICNPLRYASILTNSRIAKIGLAIVLRSVLLLLPLPFLLKRLPFCHSNVLSHSYCLHQDVMKLACSDTRVNSI 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 202 YQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTHVAKRKVSSDVPILLN 281
Cdd:cd15222 174 YGLFVVLSTMGLDSLLILLSYVLILKTVLGIASREERLKALNTCVSHICAVLIFYVPMIGLSMVHRFGKHASPLVHVLMA 253
                       250       260
                ....*....|....*....|..
gi 22128867 282 VLHHVIPAALNPIVYGVRTQEI 303
Cdd:cd15222 254 NVYLLVPPVLNPIIYSVKTKQI 275
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
42-304 3.08e-69

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 216.69  E-value: 3.08e-69
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15948  15 ALLGNCTLLYVIKTEPSLHEPMFYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFNACLVQMFFLHSFSIMESAVLLA 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRL 201
Cdd:cd15948  95 MAFDRYVAICNPLRYATILTNSVITKIGLAALARAVTLMTPLPFLLRRLPYCRSHVIAHCYCEHMAVVKLACGDTRFNNI 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 202 YQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTHVAKRKVSSDVPILLN 281
Cdd:cd15948 175 YGIAVALFIVGLDLMFIILSYVFILRAVLSLASKEEQLKAFGTCGSHICAILVFYTPVVLSSTMHRFARHVAPHVHILLA 254
                       250       260
                ....*....|....*....|...
gi 22128867 282 VLHHVIPAALNPIVYGVRTQEIK 304
Cdd:cd15948 255 NFYLLFPPMMNPIVYGVKTKQIR 277
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
42-303 4.92e-66

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 208.56  E-value: 4.92e-66
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15956  14 SLLGNGVLLSVVWKEHRLHQPMFLFLAMLAATDLVLALSTAPKLLAILWFGATAISSYVCLSQMFLVHAFSAMESGVLVA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRL 201
Cdd:cd15956  94 MALDRFVAICNPLHYATILTLEVVAKAGLLLALRGVAIVIPFPLLVCRLSFCASHTIAHTYCEHMAVVKLACGATTVDSL 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 202 YQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTHVAKRKVSSDVPILLN 281
Cdd:cd15956 174 YGLALALFIGGGDVLFIAYSYGLIVKTVLRLPSPEARGKAFSTCSAHICVILFFYIPGLLSVLMHRFGHSVPSAAHVLLS 253
                       250       260
                ....*....|....*....|..
gi 22128867 282 VLHHVIPAALNPIVYGVRTQEI 303
Cdd:cd15956 254 NLYLLLPPALNPIVYGIRTKQI 275
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
42-304 3.19e-63

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 201.93  E-value: 3.19e-63
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15949  30 AVLGNCTILFIIKSEPSLHQPMYFFLSMLAIIDLVLSTSTMPKLLAIFWFSSNEIPLHACLLQMFLIHSFSAIESGIFLA 109
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRL 201
Cdd:cd15949 110 MAFDRYVAICNPLRHKTILTNTTVIRIGLAAVIRGVLYISPLPLLVRRLPWYRTNIIAHSYCEHMAVVGLACGDVSINNH 189
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 202 YQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTHVAKRKVSSDVPILLN 281
Cdd:cd15949 190 YGLTIGFLVLIMDSLFIVLSYIMILRVVQRLATSEARLKTFGTCVSHVCAILAFYVPIAVSSLIHRFGQNVPPPTHILLA 269
                       250       260
                ....*....|....*....|...
gi 22128867 282 VLHHVIPAALNPIVYGVRTQEIK 304
Cdd:cd15949 270 NFYLLIPPMLNPIVYGVRTKQIQ 292
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
42-303 5.05e-62

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 198.07  E-value: 5.05e-62
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15955  14 AVLGNCTLLIVIKRERSLHQPMYIFLAMLAATDLGLCPCILPKMLAIFWFQLREISFNACLAQMFFIHTLQAFESGILLA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPIL-SARLHYCGRNVIENCICANMSVSRLSCNDVNVNR 200
Cdd:cd15955  94 MALDRYVAICHPLRHSSILTPQVLLGIGVLVVVRAVVLIIPCPLLiKLRLHHFRSTVISHSYCEHMAVVKLAADDVRVNK 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 201 LYQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTHVAKRKVSSDVPILL 280
Cdd:cd15955 174 IYGLFVAFSILGFDIIFITTSYALIFRAVFRLPQKEARLKAFNTCTAHIFVFLLFYTLAFFSFFAHRFGHHVAPYVHILL 253
                       250       260
                ....*....|....*....|...
gi 22128867 281 NVLHHVIPAALNPIVYGVRTQEI 303
Cdd:cd15955 254 SNLYLLVPPVLNPIVYGVKTKQI 276
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
46-311 5.04e-60

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 193.10  E-value: 5.04e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867    46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:pfam13853  12 NGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIMESAVLLAMAVD 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867   126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:pfam13853  92 RFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSCADIKVNNIYGLF 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867   206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTHVAKRKVSSDVPILLNVLHH 285
Cdd:pfam13853 172 VVTSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVHRFGHNVPPLLQIMMANAYL 251
                         250       260
                  ....*....|....*....|....*.
gi 22128867   286 VIPAALNPIVYGVRTQEIKQGIKKLL 311
Cdd:pfam13853 252 FFPPVLNPIVYSVKTKQIRDCVKRML 277
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
42-303 6.65e-60

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 192.73  E-value: 6.65e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15954  14 AMVGNCGLLYLIWIEEALHRPMYYFLSMLSFTDITLCTTMVPKAMCIFWFNLKEISFNACLVQMFFVHTFTGMESGVLML 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRL 201
Cdd:cd15954  94 MALDRYVAICYPLRYATILTNPVITKAGLATFLRGVMLIIPFPLLTKRLPYCRGNFIPHTYCDHMSVVKLACANIRVDAI 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 202 YQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTH-VAKRKVSSDVPILL 280
Cdd:cd15954 174 YGLMVALLIGGFDILCISVSYAMILRAVVSLSSKEARSKAFSTCTAHICAIVITYTPAFFTFFAHrFGGHHITPHIHIIM 253
                       250       260
                ....*....|....*....|...
gi 22128867 281 NVLHHVIPAALNPIVYGVRTQEI 303
Cdd:cd15954 254 ANLYLLLPPMMNPIVYGVKTKQI 276
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
45-299 1.31e-53

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 176.13  E-value: 1.31e-53
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  45 ANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAF 124
Cdd:cd13954  17 GNLLIILLVRLDSRLHTPMYFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYFFFSLGGTECFLLAVMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 125 DRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQF 204
Cdd:cd13954  97 DRYVAICHPLHYPTIMNKRVCILLAAGSWLIGFLNSLIHTVLISQLPFCGSNVINHFFCDIPPLLKLSCSDTSLNELVIF 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 205 AIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFI-LILFFSTILLVFILTHVAKrkvSSDVPILLNVL 283
Cdd:cd13954 177 ILAGFVGLGSFLLTLVSYIYIISTILKIPSAEGRQKAFSTCASHLTvVSLFYGTIIFMYVRPSSSY---SSDLDKVVSVF 253
                       250
                ....*....|....*.
gi 22128867 284 HHVIPAALNPIVYGVR 299
Cdd:cd13954 254 YTVVTPMLNPIIYSLR 269
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
42-299 5.36e-43

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 148.95  E-value: 5.36e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15232  14 ALTGNSLIILAISTSPKLHTPMYFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYFFTWSLGSELLLLTA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRL 201
Cdd:cd15232  94 MAYDRYVAICHPLHYSTIMRKEVCVGLATGVWAIGMLNSAVHTGLMLRLSFCGPNIINHFFCEIPPLLLLSCSDTSLNEI 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 202 YQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFIlthvakRKVSSDVP--- 277
Cdd:cd15232 174 MAFVADVFFGVGNFLLTLTSYGFIIRSILRIRSTEGKKKAFSTCSSHLIVVsLYYSTVIYTYI------RPSSSYSPekd 247
                       250       260
                ....*....|....*....|..
gi 22128867 278 ILLNVLHHVIPAALNPIVYGVR 299
Cdd:cd15232 248 KVVAVLYSVVTPTLNPLIYSLR 269
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
46-307 8.82e-43

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 148.52  E-value: 8.82e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15235  19 NLLIVLLIRSDPRLHTPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMYFFIAFGNTDSFLLAVMAYD 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15235  99 RYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSFCGSNEIPHFFCDLQPLLKLSCSDTSLNELLIFT 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHF-ILILFFSTILLVFILTHVAKrkvSSDVPILLNVLH 284
Cdd:cd15235 179 EGAVVVLGPFLLIVLSYARILAAVLKVPSAAGRRKAFSTCGSHLtVVALFYGTIIGVYFQPSSSY---SADKDRVATVMY 255
                       250       260
                ....*....|....*....|...
gi 22128867 285 HVIPAALNPIVYGVRTQEIKQGI 307
Cdd:cd15235 256 TVVTPMLNPFIYSLRNKDVKGAL 278
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
46-299 3.58e-42

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 146.75  E-value: 3.58e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15914  18 NLLIFTVVRLDTHLHTPMYFFISILSFLEIWYTTVTIPKMLSNLLSEEKTISFNGCLLQMYFFHSLGITECYLLTAMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15914  98 RYLAICNPLHYPSIMTPKLCTQLAAGCWLCGFLGPVPEIILISTLPFCGPNQIQHIFCDFPPLLSLACTDTSLNVLVDFV 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFIL-ILFFSTILLVFILThvaKRKVSSDVPILLNVLH 284
Cdd:cd15914 178 IHAVIILLTFLLILLSYVKIISVVLKIPSAEGRQKAFSTCAAHLTVvLLFFGSVSFMYLRL---SKSYSLDYDRAIAVVY 254
                       250
                ....*....|....*
gi 22128867 285 HVIPAALNPIVYGVR 299
Cdd:cd15914 255 AVLTPFFNPIIYSLR 269
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
45-304 4.28e-42

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 146.83  E-value: 4.28e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  45 ANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAF 124
Cdd:cd15225  17 GNLLIILITKVDPALHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFFLFLGGTECFLLAAMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 125 DRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQF 204
Cdd:cd15225  97 DRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSNEINHFFCDIPPVLKLACADTSLNEIAIF 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 205 AIGWTLLGSDLFLIFLSYTLILRAVLRLK-AEGAvAKALSTCGSHFI-LILFFSTILLVFILThvaKRKVSSDVPILLNV 282
Cdd:cd15225 177 VASVLVILVPFLLILVSYIFIISTILKIPsAEGR-RKAFSTCSSHLIvVTLFYGCASFTYLRP---KSSYSPETDKLLSL 252
                       250       260
                ....*....|....*....|..
gi 22128867 283 LHHVIPAALNPIVYGVRTQEIK 304
Cdd:cd15225 253 FYTVVTPMLNPIIYSLRNKEVK 274
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
42-299 7.48e-42

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 145.83  E-value: 7.48e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15918  14 TVLGNLLIILAIGSDSHLHTPMYFFLANLSLVDICFTSTTVPKMLVNIQTQSKSISYAGCLTQMYFFLLFGDLDNFLLAV 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRL 201
Cdd:cd15918  94 MAYDRYVAICHPLHYTTIMSPRLCILLVAASWVITNLHSLLHTLLMARLSFCASNEIPHFFCDLNPLLKLSCSDTHLNEL 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 202 YQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHF-ILILFFSTILLVFIL----THVAKRKVSSdv 276
Cdd:cd15918 174 VILVLGGLVGLVPFLCILVSYVRIVSAVLRIPSAGGKWKAFSTCGSHLsVVSLFYGTVIGVYLSppssHSASKDSVAA-- 251
                       250       260
                ....*....|....*....|...
gi 22128867 277 pillnVLHHVIPAALNPIVYGVR 299
Cdd:cd15918 252 -----VMYTVVTPMLNPFIYSLR 269
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
42-307 3.51e-41

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 144.33  E-value: 3.51e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15231  14 TLLGNLLIITLVLLDSHLHTPMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLFFFVSFVGTECLLLAV 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRL 201
Cdd:cd15231  94 MAYDRYVAICNPLHYAVIMSRKVCLQLAAASWLCGFLNSAVHTVLTFRLSFCGSNQISHFFCDIPPLLKLSCSDTSLNEV 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 202 YQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFIL-ILFFSTILLVFIlthvakRKVSS---DVP 277
Cdd:cd15231 174 LLLVASVFIGLTPFLFIVISYVYIISTILKIRSAEGRRKAFSTCASHLTVvTLFYGTAIFNYN------RPSSGyslDKD 247
                       250       260       270
                ....*....|....*....|....*....|
gi 22128867 278 ILLNVLHHVIPAALNPIVYGVRTQEIKQGI 307
Cdd:cd15231 248 TLISVLYSIVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
43-309 6.16e-41

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 143.69  E-value: 6.16e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  43 MGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIM 122
Cdd:cd15412  15 LLGNLGMILLIRLDSRLHTPMYFFLSHLSFVDLCYSSNVTPKMLVNFLSEKKTISFAGCFTQCYFFIALVITEYYMLAVM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 123 AFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLY 202
Cdd:cd15412  95 AYDRYMAICNPLLYSVKMSRRVCISLVTFPYIYGFLNGLIQTILTFRLSFCGSNVINHFYCADPPLIKLSCSDTYVKETA 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 203 QFAI-GWTLLGSdLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTHVAKRKVSSDVPIllN 281
Cdd:cd15412 175 MFIVaGFNLSSS-LLIILISYLFILIAILRIRSAEGRCKAFSTCGSHLTAVTIFYGTLFCMYLRPPSEESVEQSKIV--A 251
                       250       260
                ....*....|....*....|....*...
gi 22128867 282 VLHHVIPAALNPIVYGVRTQEIKQGIKK 309
Cdd:cd15412 252 VFYTFVSPMLNPLIYSLRNKDVKQALKK 279
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
46-299 5.69e-40

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 140.82  E-value: 5.69e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYImNSFLAM-ESCTFMIMAF 124
Cdd:cd15431  18 NGLIILLIRVDSQLHTPMYFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYI-SLFLGItECLLLAVMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 125 DRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLpIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQF 204
Cdd:cd15431  97 DRFVAICNPLRYTLIMSWRVCIQLAAGSWVSAFLLTV-IPVLTMPLHFCGPNVINHFFCEVQALLKLACSDTSLNEILMF 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 205 AIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFILThvaKRKVSSDVPILLNVL 283
Cdd:cd15431 176 ATSIFTLLLPFSFILVSYIRIGVAVLRIRSAEGRRKAFSTCGSHLTVVtIFYGTAIFMYLRP---QSKSSSDQDKIISVF 252
                       250
                ....*....|....*.
gi 22128867 284 HHVIPAALNPIVYGVR 299
Cdd:cd15431 253 YGVVTPMLNPLIYSLR 268
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
46-309 1.05e-39

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 140.53  E-value: 1.05e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15411  18 NLGMILLIRADSQLHTPMYFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFFIALATTECFLLGLMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15411  98 RYVAICNPLLYTVVMSRRVCLKLAAGSYAAGFLNSLIHTTLISRLSFCGSNVINHFFCDTPPLLKLSCSDTHVNEMLIFI 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 I-GWTLLGSdLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHF-ILILFFSTILLVFILTHvakRKVSSDVPILLNVL 283
Cdd:cd15411 178 LaGLTLVGS-LLIILVSYTYILSTILKIRSAEGRRKAFSTCASHLtAVTIFYGTGIFTYLRPS---SSYSLGQDKVASVF 253
                       250       260
                ....*....|....*....|....*.
gi 22128867 284 HHVIPAALNPIVYGVRTQEIKQGIKK 309
Cdd:cd15411 254 YTVVIPMLNPLIYSLRNKEVKNALRR 279
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
42-304 1.72e-38

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 137.30  E-value: 1.72e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15421  14 ALTGNALLILLIWLDSRLHTPMYFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGTQIFFFLTLGGAECLLLAL 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRL 201
Cdd:cd15421  94 MAYDRYVAICHPLRYPVLMSPRVCLLMAAGSWLGGSLNSLIHTVYTMHFPYCGSREIHHFFCEVPALLKLSCADTSAYET 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 202 YQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFI-LILFFSTILLVFILTHVAKrkvSSDVPILL 280
Cdd:cd15421 174 VVYVSGVLFLLIPFSLILASYALILLTVLRMRSAEGRKKALATCSSHLTvVSLYYGPAIFTYMRPGSYH---SPEQDKVV 250
                       250       260
                ....*....|....*....|....
gi 22128867 281 NVLHHVIPAALNPIVYGVRTQEIK 304
Cdd:cd15421 251 SVFYTILTPMLNPLIYSLRNKEVL 274
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
46-299 2.10e-38

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 137.03  E-value: 2.10e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15224  18 NLLIILTIWLNSQLHKPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFLSLACTECVLLAVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15224  98 RYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGPNVINHFFCDISPLLNLSCTDMSLAELVDFI 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHF-ILILFFSTIllvfILTHVAKRKVSS-DVPILLNVL 283
Cdd:cd15224 178 LALIILLVPLLVTVASYICIISTVLRIPSATGRQKAFSTCASHLtVVIIFYSAT----LFMYARPKAISSfDSNKLVSVL 253
                       250
                ....*....|....*.
gi 22128867 284 HHVIPAALNPIVYGVR 299
Cdd:cd15224 254 YTVVTPLLNPIIYCLR 269
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
45-304 2.42e-38

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 137.07  E-value: 2.42e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  45 ANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAF 124
Cdd:cd15420  17 GNGLILGLIWLDSRLHTPMYFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLFLALAHTECVLLAVMSY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 125 DRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQF 204
Cdd:cd15420  97 DRYVAICHPLRYTVIMNWRVCTTLAATSWACGFLLALVHVVLLLRLPFCGPNEVNHFFCEILAVLKLACADTWINEILIF 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 205 AIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFILTHVAKRKVSSDVpilLNVL 283
Cdd:cd15420 177 AGCVFILLGPFSLILISYLHILAAILKIQSAEGRRKAFSTCSSHLCVVgLFYGTAMFMYMVPGSSNSAEQEKI---LSLF 253
                       250       260
                ....*....|....*....|.
gi 22128867 284 HHVIPAALNPIVYGVRTQEIK 304
Cdd:cd15420 254 YSLFNPMLNPLIYSLRNKQVK 274
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
16-309 6.65e-38

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 136.03  E-value: 6.65e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  16 FLLNCFVRSPSWQLWLSLPLSLLFLLAMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRA 95
Cdd:cd15945   1 FILLGFTDYLSLKVTLFLVFLLVYLLTLVGNVGMIILIRMDSQLHTPMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRKS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  96 IGFPACFLQMYIMNSFLAMESCTFMIMAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGR 175
Cdd:cd15945  81 IPFYGCALQMFFFAAFADAECLLLAVMAYDRYVAICNPLLYTTAMSRRVCYLLLVGAYLSGMATSLVHTTLTFRLSFCGS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 176 NVIENCICANMSVSRLSCNDVNVNRLYQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LF 254
Cdd:cd15945 161 NTINHFFCDIPPLLALSCSDTQINELLLFALCGFIQTSTFLAIIISYCYIIITVLKIRSAEGRFKAFSTCASHLTAVgLF 240
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 22128867 255 FSTILLVFIlthvakRKVSS---DVPILLNVLHHVIPAALNPIVYGVRTQEIKQGIKK 309
Cdd:cd15945 241 YGTLLFMYL------RPSSSyslDTDKMTSVFYTLVIPMLNPLIYSLRNKDVKEALKK 292
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
49-299 1.43e-37

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 134.56  E-value: 1.43e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  49 LLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFDRYI 128
Cdd:cd15230  21 MIVLIRIDSRLHTPMYFFLSNLSFVDICYSSVITPKMLVNFLSEKKTISFAGCAAQFFFFAVFGTTECFLLAAMAYDRYV 100
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 129 AICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFAIGW 208
Cdd:cd15230 101 AICNPLLYTVIMSKRVCIQLVAGSYLCGFVNSIVHTSSTFSLSFCGSNVINHFFCDIPPLLKLSCSDTHINELVLFAFSG 180
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 209 TLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFI----LTHVAKRKVSSdvpillnVL 283
Cdd:cd15230 181 FIGLSTLLIILISYLYILITILRIRSAEGRRKAFSTCASHLTAVsLFYGTLIFMYLrpssSYSLDQDKVVS-------VF 253
                       250
                ....*....|....*.
gi 22128867 284 HHVIPAALNPIVYGVR 299
Cdd:cd15230 254 YTVVIPMLNPLIYSLR 269
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
46-309 1.50e-37

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 134.69  E-value: 1.50e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15417  18 NLGLIILIRMDSHLHTPMYFFLSNLSFVDICYSSSITPKMLSDFFREQKTISFVGCATQYFVFSGMGLTECFLLAAMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15417  98 RYVAICNPLLYSVIMSPRLCVQLVAGAYLGGFLNSLIQTVSMFQLSFCGPNVIDHFFCDIPPLLSLSCSDTFISQVVLFL 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFI-LILFFSTILLVFILthvAKRKVSSDVPILLNVLH 284
Cdd:cd15417 178 VAVLFGVFSVLVVLISYGYIISTILKIRSAKGRSKAFNTCASHLTaVTLFYGTGLFVYLR---PSSSHSQDQDKVASVFY 254
                       250       260
                ....*....|....*....|....*
gi 22128867 285 HVIPAALNPIVYGVRTQEIKQGIKK 309
Cdd:cd15417 255 TVVIPMLNPLIYSLRNKEIKDALKR 279
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
46-299 2.08e-37

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 134.42  E-value: 2.08e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15430  18 NGVLIIITILDSHLHTPMYFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMYLSLAMGSTECVLLAVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15430  98 RYVAICNPLRYPIIMNKRLCVQMAAGSWVTGFLNSLVETVLAMQLPFCGNNVINHFTCEILAVLKLACVDISLNEIIMLV 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHF-ILILFFSTILLVFIlthVAKRKVSSDVPILLNVLH 284
Cdd:cd15430 178 GNIIFLVIPLLLICISYIFILSTILRINSAEGRKKAFSTCSAHLtVVIIFYGTILFMYM---KPKSKNAQISDKLITLFY 254
                       250
                ....*....|....*
gi 22128867 285 HVIPAALNPIVYGVR 299
Cdd:cd15430 255 GVVTPMLNPIIYSLR 269
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
45-299 2.47e-37

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 133.94  E-value: 2.47e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  45 ANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAF 124
Cdd:cd15237  17 GNGLIILLIWLDSRLHTPMYFFLSNLSLLDICYTTSTVPQMLVHLLSEHKTISFVGCAAQMFFFLALGVTECVLLAVMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 125 DRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQF 204
Cdd:cd15237  97 DRYVAICNPLRYSVIMSRRVCVRLAATSWASGFLNSLVLTSLTLRLPFCGPNHINHFFCEAPAVLKLACADTSLNEAVIF 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 205 AIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFIL-ILFFSTILLVFILTHvakRKVSSDVPILLNVL 283
Cdd:cd15237 177 VTSVLVLLIPFSLILASYIRILATILRIQSAEGRKKAFSTCASHLTVvTLFYGTAIFMYMRPH---STHSPDQDKMISVF 253
                       250
                ....*....|....*.
gi 22128867 284 HHVIPAALNPIVYGVR 299
Cdd:cd15237 254 YTIVTPMLNPLIYSLR 269
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
46-309 7.85e-37

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 132.82  E-value: 7.85e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15419  18 NIGMIIIISTDSRLHTPMYFFLMNLSFLDLCYSSVIAPKALANFLSESKTISYNGCAAQFFFFSLFGTTEGFLLAAMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15419  98 RFIAICNPLLYPVIMSRRVCVQLVAGSYLCGCINSIIQTSFTFSLSFCGSNEIDHFFCDVPPLLKLSCSDTFINELVMFV 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFI----LTHVAKRKVSSdvpill 280
Cdd:cd15419 178 LCGLIIVSTILVILVSYAYILSTILRIPSAEGRKKAFSTCASHLTAVsLFYGTVFFMYAqpgaVSSPEQSKVVS------ 251
                       250       260
                ....*....|....*....|....*....
gi 22128867 281 nVLHHVIPAALNPIVYGVRTQEIKQGIKK 309
Cdd:cd15419 252 -VFYTLVIPMLNPLIYSLRNKDVKEALKR 279
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
46-299 9.29e-37

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 132.44  E-value: 9.29e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15913  18 NGAIICAVWWDRRLHTPMYILLGNFSFLEICYVTSTVPNMLVNFLSETKTISFSGCFLQFYFFFSLGTTECFFLSVMAFD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLItLPIPI-LSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQF 204
Cdd:cd15913  98 RYLAICRPLHYPTIMTGQLCGKLVAFCWVCGFLW-FLIPVvLISQLPFCGPNIIDHFLCDPGPLLALSCVPAPGTELICY 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 205 AIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFIlthVAKRKVSSDVPILLNVL 283
Cdd:cd15913 177 TLSSLIIFGTFLFILGSYTLVLRAVLRVPSAAGRHKAFSTCGSHLAVVsLFYGSVMVMYV---SPGSGNSTGMQKIVTLF 253
                       250
                ....*....|....*.
gi 22128867 284 HHVIPAALNPIVYGVR 299
Cdd:cd15913 254 YSVVTPLLNPLIYSLR 269
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
74-299 9.82e-37

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 132.61  E-value: 9.82e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  74 DIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFDRYIAICHPLRYPSIITDQFVVKAATFIL 153
Cdd:cd15911  46 EICYTSTILPRMLASLLTGDRTISVSGCIVQFYFFGSLAATECYLLAVMSYDRYLAICKPLHYASLMNGRLCLQLAAGSW 125
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 154 VRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFAIGWTLLGSDLFLIFLSYTLILRAVLRLK 233
Cdd:cd15911 126 ISGFLASTITVILMSQLTFCGPNEIDHFFCDFAPLLKLSCSDTSLVELVTFILSSIVTLPPFLLTLTSYICIISTILRIP 205
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 22128867 234 AEGAVAKALSTCGSHFILI-LFFSTILLVFIlthVAKRKVSSDVPILLNVLHHVIPAALNPIVYGVR 299
Cdd:cd15911 206 STTGRQKAFSTCSSHLIVVtIFYGTLIIVYV---VPSTNTSRDLNKVFSLFYTVLTPLVNPLIYSLR 269
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
46-309 3.04e-36

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 131.38  E-value: 3.04e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15409  18 NLGLIALIWKDSHLHTPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFFFGFSATTECFLLAAMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15409  98 RYVAICNPLLYPVVMSNRLCVQLITASYIGGFLHSMIHVGLTFRLSFCGSNEINHFFCDIPPLLKISCTDPSINELVLFI 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFILTHVAKrkvSSDVPILLNVLH 284
Cdd:cd15409 178 FSGSIQVFTILTVLISYSYILFTILKMKSAEGRRKAFSTCGSHLLSVsLFYGSLFFMYVRPSSLY---ALDQDMMDSLFY 254
                       250       260
                ....*....|....*....|....*
gi 22128867 285 HVIPAALNPIVYGVRTQEIKQGIKK 309
Cdd:cd15409 255 TIVIPLLNPFIYSLRNKEVIDALRK 279
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
46-299 5.09e-36

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 130.68  E-value: 5.09e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15946  18 NGLIITLICLDSRLHTPMYFFLSVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYIFLALGITECTLFSVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15946  98 RYVAICHPLRYKVIMSWGLCILMVAGSWVCGVFSSLLHTFFTMRLPYCGPNEINHYFCEVPAVLKLACADTSLNEMVDFV 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFStILLVFILTHVAKrKVSSDVPILLNVLHH 285
Cdd:cd15946 178 LGVIVLVVPLSLILASYVNIFKAILKIRSTQGRCKAFSTCASHITVVTMFY-GPAMFMYMRPGS-NYSPERDKKISLFYN 255
                       250
                ....*....|....
gi 22128867 286 VIPAALNPIVYGVR 299
Cdd:cd15946 256 VFTALLNPVIYSLR 269
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
46-299 6.91e-36

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 130.30  E-value: 6.91e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15912  18 NLLIITITLVDHRLHTPMYFFLRNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSFFYFFLGTTEFFLLAVMSFD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15912  98 RYVAICNPLHYPTIMNSRVCLQLVLGSWVGGFLLILPPTILVFQLPFCGPNVINHFFCDSGPLLKLSCSDTRLIELLDFI 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFILTHVAKRKVSSDVPILLNVLh 284
Cdd:cd15912 178 LASVVLLGSLLLTIVSYIYIISTILRIPSASGRQKAFSTCASHLTVVsIFYGSCIFMYVRPSQSSSLDLNKVVALLNTV- 256
                       250
                ....*....|....*
gi 22128867 285 hVIPaALNPIVYGVR 299
Cdd:cd15912 257 -VTP-LLNPFIYTLR 269
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
46-305 1.67e-35

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 129.47  E-value: 1.67e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15424  18 NLVIIILVQTDSRLHTPMYFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIALSLGSTECLLLGAMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15424  98 RYLAICHPLLYAAAMGRWRQLQLALSCWAIGFLLSVINVGCTLRHPFCGPNHINHFFCELPVVLKLACADTHITEAIVFG 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFIlthVAKRKVSSDVPILLNVLH 284
Cdd:cd15424 178 AGVLILLVPLSVILTSYGLILASVLQMQSAAGRHKAFSTCASHLAVVtLFYGTVISMYM---RPRSGSTPDRDKQIAVFY 254
                       250       260
                ....*....|....*....|.
gi 22128867 285 HVIPAALNPIVYGVRTQEIKQ 305
Cdd:cd15424 255 IVITPLLNPIIYTLRNKDVHG 275
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
46-304 1.95e-35

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 129.25  E-value: 1.95e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15229  18 NLLIMLVIRADSHLHTPMYFFLSHLSFLDICYSSVTVPKMLENLLSERKTISVEGCIAQIFFFFFFAGTEAFLLSAMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15229  98 RYAAICHPLHYVQIMSKQVCVQLVGGAWALGFLYALINTLLLLNLHFCGPNEINHFSCELPSLLPLSCSDTFANKMVLLT 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFI-LILFFSTILLVFILTHVAKrkvSSDVPILLNVLH 284
Cdd:cd15229 178 SSVIFGLGSFLLTLVSYIHIISTILRIRSAEGRSKAFSTCSSHLTvVGLFYGTGFFRYLRPNSAS---SSVLDRVFSIQY 254
                       250       260
                ....*....|....*....|
gi 22128867 285 HVIPAALNPIVYGVRTQEIK 304
Cdd:cd15229 255 SILTPMLNPIIYSLKNKEVK 274
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
43-307 3.89e-35

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 128.65  E-value: 3.89e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  43 MGANAILLITiRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIM 122
Cdd:cd15434  16 VGNTTIILVS-CLDSRLHTPMYFFLANLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLFIALGLGGTECVLLAVM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 123 AFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLY 202
Cdd:cd15434  95 AYDRYAAVCQPLHYTVVMHPRLCWKLVAMSWLIGFGNSLVLSPLTLSLPRCGHHRVDHFFCEMPALIKLACVDTTAYEAT 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 203 QFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFILthvAKRKVSSDVPILLN 281
Cdd:cd15434 175 IFALGVFILLFPLSLILVSYGYIARAVLKIKSAAGRKKAFGTCGSHLTVVsLFYGTIIYMYLQ---PKNSVSQDQGKFLT 251
                       250       260
                ....*....|....*....|....*.
gi 22128867 282 VLHHVIPAALNPIVYGVRTQEIKQGI 307
Cdd:cd15434 252 LFYTIVTPSLNPLIYTLRNKDVKGAL 277
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
46-304 4.46e-35

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 128.59  E-value: 4.46e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15408  31 NLGMILLIRLDSRLHTPMYFFLSHLSFLDICYSSTITPKTLLNLLAERKVISFTGCLTQLYFYAVFATTECYLLAAMAYD 110
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15408 111 RYVAICNPLLYTVIMSQRVCVSLVAGSYLAGFLNSTVHTGFILRLSFCGSNVINHFFCDGPPLLALSCSDTSLNEMLLFA 190
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 -IGWTLLGSDLFlIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFSTILLVFILTHVAKRkvSSDVPILLNVLH 284
Cdd:cd15408 191 fVGFNVLTTTLV-ILISYTYILATILRMRSAEGRHKAFSTCASHLTAVTLFYGSLAFMYLRPSSRY--SLDLDKVASVFY 267
                       250       260
                ....*....|....*....|
gi 22128867 285 HVIPAALNPIVYGVRTQEIK 304
Cdd:cd15408 268 TVVIPMLNPLIYSLRNKEVK 287
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
49-311 4.61e-35

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 128.55  E-value: 4.61e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  49 LLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFDRYI 128
Cdd:cd15410  34 MIVLIKIDPKLHTPMYFFLSHLSFVDFCYSSVIAPKMLVNFLAEDKAISYSGCMLQFFFFCTFVVTESFLLAVMAYDRYV 113
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 129 AICHPLRYPSIITD---QFVVKAATFILVRNVLITLpipILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15410 114 AICNPLLYTVIMSRklcVLLVAGSYLWGIVCSLIHT---CGLLRLSFCGSNVINHFFCDLPPLLSLSCSDTYLNELLLFI 190
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFIlthVAKRKVSSDVPILLNVLH 284
Cdd:cd15410 191 FGSLNEASTLLIILTSYVFIIVTILRIRSAEGRQKAFSTCASHLTAItIFHGTILFMYC---RPSSSYSLDTDKVASVFY 267
                       250       260
                ....*....|....*....|....*..
gi 22128867 285 HVIPAALNPIVYGVRTQEIKQGIKKLL 311
Cdd:cd15410 268 TVVIPMLNPLIYSLRNKDVKDALRKLI 294
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
15-311 5.41e-35

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 128.64  E-value: 5.41e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  15 DFLLNCFVRSPSWQLWLSLPLSLLFLLAMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLR 94
Cdd:cd15943   1 EFILLGLTDNPELQVILFAVFLVIYLITLVGNLGMIVLIRLDSRLHTPMYFFLSHLSFLDLCYSSAITPKMLVNFLAENK 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  95 AIGFPACFLQMYIMNSFLAMESCTFMIMAFDRYIAICHPLRYPSIITDQFVVK--AATFILvrNVLITLPIPILSARLHY 172
Cdd:cd15943  81 TISFTGCAAQMYFFVAFATTECFLLAVMAYDRYVAICNPLLYTVIMSPRVCIQlvAGSYLI--GFVNALIQTICTFRLPF 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 173 CGRNVIENCICANMSVSRLSCNDVNVNRLYQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI 252
Cdd:cd15943 159 CGSNVINHFFCDVPPLLKLSCSDTHVNEIVLFAFAIFLGIFTSLEILVSYVYILSAILRIHSSEGRRKAFSTCASHLMAV 238
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 22128867 253 -LFFSTILLVFIlthvakRKVSSDVP---ILLNVLHHVIPAALNPIVYGVRTQEIKQGIKKLL 311
Cdd:cd15943 239 tIFYGTTLFMYL------RPSSSYSLdqdKVVSVFYTVVIPMLNPLIYSLRNKEVKDALRRIL 295
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
46-307 1.43e-34

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 126.81  E-value: 1.43e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15236  18 NLLIILLIRLDSHLHTPMYFFLSHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYFFIFFGCLDSFLLAVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15236  98 RYVAICHPLHYTAIMRPELCVLLVAGSWVLTCFHALLHTLLLARLSFCADNVIPHFFCDLVALLKLSCSSTSLNELVIFT 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSH-FILILFFSTILLVFILTHVAKrkvSSDVPILLNVLH 284
Cdd:cd15236 178 EGGLLFVLPLLLILGSYIRIAATILKVPSTKGICKAFSTCGSHlSVVFLYYGTIIGVYFFPSSNN---SSDKDIVASVMY 254
                       250       260
                ....*....|....*....|...
gi 22128867 285 HVIPAALNPIVYGVRTQEIKQGI 307
Cdd:cd15236 255 TVVTPMLNPFIYSLRNRDIKGAL 277
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
46-304 1.57e-34

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 126.75  E-value: 1.57e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15429  18 NFLIILLIRLDPRLHTPMYFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVAQLFISLALGGTEFILLAVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15429  98 RYVAVCHPLRYTVIMSGGLCIQLAAASWTSGFLNSLVQTAFTFRLPFCGHNTINHFSCELLAVVRLACVDTSLNEVAILV 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHF-ILILFFSTILLVFILTHvakRKVSSDVPILLNVLH 284
Cdd:cd15429 178 SSVVVLLTPCFLVLLSYIHIISAILRIRSSEGRHKAFSTCASHLtVVSLCYGTAIFTYMRPR---SGSSALQEKMISLFY 254
                       250       260
                ....*....|....*....|
gi 22128867 285 HVIPAALNPIVYGVRTQEIK 304
Cdd:cd15429 255 AVVTPMLNPLIYSLRNKEVK 274
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
46-304 1.71e-33

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 124.10  E-value: 1.71e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFW-FDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAF 124
Cdd:cd15916  18 NLLILLTVWVDSHLHRPMYIFLGHLSFLDMWLSTVTVPKMLAGFLePGGKVISFGGCVAQLYFFHFLGSTECFLYTLMAY 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 125 DRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQF 204
Cdd:cd15916  98 DRYLAICHPLHYPTIMTGRLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGPNRIDYFFCDIPPLLKLACADTTINELVIF 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 205 A-IGWTLLGSdLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFsTILLVFILTHVAKRKVSSDVPillNVL 283
Cdd:cd15916 178 AsIGVVALGC-FILILLSYGNIVRAILRIRTAEGRRRAFSTCASHLIVVLCF-YVPCVFIYLRPGSKEALDGVI---AVF 252
                       250       260
                ....*....|....*....|.
gi 22128867 284 HHVIPAALNPIVYGVRTQEIK 304
Cdd:cd15916 253 YTVVTPLLNPLIYTLRNKEVK 273
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
43-299 6.65e-33

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 122.35  E-value: 6.65e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  43 MGANAILLITiRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIM 122
Cdd:cd15947  16 LGNTAIILLS-LLDPRLHTPMYFFLSNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLYIFLWLGSTECVLLAVM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 123 AFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLY 202
Cdd:cd15947  95 AFDRYVAVCRPLHYTVIMHPRLCVQLAALSWLSGLANSLLQTTLTLQLPLCGHHTLDHFFCEVPALIKLACVDTTFNELE 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 203 QFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFI-LILFFSTILLVFILthvAKRKVSSDVPILLN 281
Cdd:cd15947 175 LFVASVFFLLVPLSLILVSYGFIARAVLRIKSAEGRRKAFGTCSSHLLvVSLFYGTAIYMYLQ---PPSSYSQDQGKFIS 251
                       250
                ....*....|....*...
gi 22128867 282 VLHHVIPAALNPIVYGVR 299
Cdd:cd15947 252 LFYTVVTPTLNPLIYTLR 269
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
43-299 1.50e-32

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 121.64  E-value: 1.50e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  43 MGANAILLITIRmEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIM 122
Cdd:cd15915  16 LGNGAILAVVIA-EPRLHSPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFFHFLGSSEAMLLAVM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 123 AFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLY 202
Cdd:cd15915  95 AYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALMHTVMTSRLPFCGPNKINHFFCDIKPLLKLACGDTSLNLWL 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 203 QFAIGWTLLGSDLFLIFLSYTLILRAVL-RLKAEGAVAKALSTCGSHF-ILILFFSTILLVFILthvAKRKVSSDVPILL 280
Cdd:cd15915 175 LNIVTGSIALGTFILTLLSYIYIISFLLlKVRSKEGRHKAFSTCASHLtVVLLLYGPALFTYIR---PSSGDSLEQDRIV 251
                       250
                ....*....|....*....
gi 22128867 281 NVLHHVIPAALNPIVYGVR 299
Cdd:cd15915 252 ALLYTVVTPVLNPLIYTLR 270
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
46-305 2.00e-32

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 121.15  E-value: 2.00e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15234  18 NLLIILAVSSDSHLHTPMYFFLSNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTQMCFFLLFGGLDNFLLAVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15234  98 RYVAICHPLHYTVIMNPCLCGLLVLLSLLISILDSLLHSLMVLQLSFCTDVEIPHFFCELAQVLKLACSDTLINNILIYL 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFILTHVAKrkvSSDVPILLNVLH 284
Cdd:cd15234 178 ATVIFGGIPLSGIIFSYYKIVSSILRIPSSGGKYKAFSTCGSHLSVVsLFYGTGLGVYISSAVTH---SSRKTAVASVMY 254
                       250       260
                ....*....|....*....|.
gi 22128867 285 HVIPAALNPIVYGVRTQEIKQ 305
Cdd:cd15234 255 TVVTPMLNPFIYSLRNKDMKG 275
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
77-299 2.18e-32

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 121.02  E-value: 2.18e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  77 LCL--TVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFDRYIAICHPLRYPSIITDQFVVKAATFILV 154
Cdd:cd15227  47 LCYisVTVPKSIANSLTNTRSISFLGCVAQVFLFIFFAASELALLTVMAYDRYVAICHPLHYEVIMNRGACVQMAAASWL 126
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 155 RNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKA 234
Cdd:cd15227 127 SGLLYGALHTANTFSLPFCGSNVIHQFFCDIPQLLKLSCSDTYLNEIGVLVLSVCLGLGCFVFIIVSYVHIFSTVLRIPS 206
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 22128867 235 EGAVAKALSTCGSHFI-LILFFSTILLVFIlthVAKRKVSSDVPILLNVLHHVIPAALNPIVYGVR 299
Cdd:cd15227 207 AQGRSKAFSTCLPHLIvVSLFLSTGSFAYL---KPPSDSPSLLDLLLSVFYSVVPPTLNPIIYSLR 269
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
43-313 7.81e-32

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 119.84  E-value: 7.81e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  43 MGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIM 122
Cdd:cd15414  15 LLGNLGMIILIQVDSRLHTPMYFFLSHLSFVDLCYSSVVTPKMLSDFFVEKKAISFLGCAAQMWFFGLFVAAECFLLASM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 123 AFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLY 202
Cdd:cd15414  95 AYDRYVAICNPLLYTVIMSQRVCVQLVVGPYVVGLLNTTTHTTAAFFLPFCGPNVINHFFCDIPPLLSLSCADTQINKWV 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 203 QFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFI-LILFFSTILLVFILthvAKRKVSSDVPILLN 281
Cdd:cd15414 175 LFIMAGALGVLSGLIILVSYIYILIAILRIRSAEGRRKAFSTCSSHLTaVSILYGTLFFIYVR---PSSSSSLDLDKVVS 251
                       250       260       270
                ....*....|....*....|....*....|..
gi 22128867 282 VLHHVIPAALNPIVYGVRTQEIKQGIKKLLKK 313
Cdd:cd15414 252 VFYTAVIPMLNPLIYSLRNKEVKDALRRTIRR 283
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
42-304 8.28e-32

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 119.51  E-value: 8.28e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15428  14 TVLGNLLLVLLVIVDSHLHTPMYFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFFLSFGITECALLSV 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRL 201
Cdd:cd15428  94 MSYDRYVAICLPLRYSLIMTWKVCISLATGSWVGGLLVSAVDTAFTLNLSFGGHNKINHFLCEMPALLKLASTDTHQAEM 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 202 YQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFI-LILFFSTILLVFIlthVAKRKVSSDVPILL 280
Cdd:cd15428 174 AMFIMCVFTLVLPVLLILASYTRIIYTVFGMQSLTGRLKAFSTCSSHLMvVSLFYGSVLSTYM---RPKSSTSKEYDKMI 250
                       250       260
                ....*....|....*....|....
gi 22128867 281 NVLHHVIPAALNPIVYGVRTQEIK 304
Cdd:cd15428 251 SVFYIIVTPMLNPLIYSLRNKEVK 274
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
45-309 8.43e-32

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 119.73  E-value: 8.43e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  45 ANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAF 124
Cdd:cd15413  17 GNLGMIILTRLDSRLQTPMYFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLAFFLTFIISELFLLSAMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 125 DRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQF 204
Cdd:cd15413  97 DRYVAICNPLLYTVIMSQRVCIVLVAIPYLYSFFVALFHTIKTFRLSFCGSNVINHFYCDDLPLLALSCSDTHEKELIIL 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 205 AIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFI-LILFFSTILLVFILthvAKRKVSSDVPILLNVL 283
Cdd:cd15413 177 IFAGFNLISSLLIVLVSYLFILSAILRIRSAEGRQKAFSTCGSHLTvVTIFYGTLIFMYLQ---PKSSHSLDTDKMASVF 253
                       250       260
                ....*....|....*....|....*.
gi 22128867 284 HHVIPAALNPIVYGVRTQEIKQGIKK 309
Cdd:cd15413 254 YTLVIPMLNPLIYSLRNKEVKDALKK 279
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
16-311 3.12e-31

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 118.73  E-value: 3.12e-31
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  16 FLLNCFVRSPSWQLWLSLPLSLLFLLAMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRA 95
Cdd:cd15944   1 FILLGFTQDPQMQIILFVVFLIIYLVNVVGNLGMIILITTDSQLHTPMYFFLCNLSFCDLGYSSAIAPRMLADFLTKHKV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  96 IGFPACFLQMYIMNSFLAMESCTFMIMAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGR 175
Cdd:cd15944  81 ISFSGCATQFAFFVGFVDAECYVLAAMAYDRYVAICNPLLYSTLMSKRVCLQLMAGSYLAGLVNLVIHTTATFSLSFCGS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 176 NVIENCICANMSVSRLSCNDVNVNRLYQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LF 254
Cdd:cd15944 161 NIINHFFCDVPPLLALSCSDTHINEILLYVFCGFVEMSSLSIILISYLFILVAILRMRSAEGRRKAFSTCASHFTGVtLF 240
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 22128867 255 FSTILLVFILTHVAkrkVSSDVPILLNVLHHVIPAALNPIVYGVRTQEIKQGIKKLL 311
Cdd:cd15944 241 YGTVIFMYLRPTSV---YSLDQDKWASVFYTVVIPMLNPLIYSLRNKDVKEAFKKLI 294
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
43-309 3.59e-31

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 117.85  E-value: 3.59e-31
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  43 MGANAILLItIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIM 122
Cdd:cd15416  16 LGNLSIILL-IRISSQLHTPMYFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSAATFGTVECFLLAAM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 123 AFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLY 202
Cdd:cd15416  95 AYDRYVAICNPLLYSTIMSQKVCVLLVAASYLGGCLNALVFTTCVFSLSFCGPNEINHFFCDFPPLLKLSCSDIRLAKIL 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 203 QFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFI-LILFFSTILLVFILthvAKRKVSSDVPILLN 281
Cdd:cd15416 175 PSISSGIIILVTVLTIIISYLYILIAILRIRSTEGRHKAFSTCASHLTaVTLFYGTITFIYVM---PNSSYSMDQNKVVS 251
                       250       260
                ....*....|....*....|....*...
gi 22128867 282 VLHHVIPAALNPIVYGVRTQEIKQGIKK 309
Cdd:cd15416 252 VFYMVVIPMLNPLIYSLRNKEVKGALKR 279
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
46-311 3.93e-31

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 118.24  E-value: 3.93e-31
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15406  27 NLGMILLITLSSQLHTPMYYFLSNLSFIDLCYSSVITPKMLVNFVSEKNIISYPECMTQLFFFCVFAIAECYMLTAMAYD 106
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15406 107 RYVAICNPLLYNVTMSPRVCSLLVAGVYIMGLIGATVHTSCMLRLSFCGDNVINHYFCDILPLLKLSCSSTYINELLLFI 186
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHF--ILILFFSTILLVFI---LTHVAKRKVSSdvpill 280
Cdd:cd15406 187 VGGFNVLATTLAILISYAFILSSILRIRSAEGRSKAFSTCSSHLaaVGVFYGSIIFMYLKpssSSSMTQEKVSS------ 260
                       250       260       270
                ....*....|....*....|....*....|.
gi 22128867 281 nVLHHVIPAALNPIVYGVRTQEIKQGIKKLL 311
Cdd:cd15406 261 -VFYTTVIPMLNPLIYSLRNKDVKNALKKVL 290
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
46-307 4.62e-30

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 114.88  E-value: 4.62e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15432  18 NLAIILVSRLDPQLHTPMYFFLSNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFIFLGLGSTECVLLAVMAFD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15432  98 RFAAICQPLHYSVIMHQRLCQQLAAGAWISGFANSLVQSTLTLKMPRCGRRRVDHFFCEVPALLKLSCVDTTANEAELFV 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFILTHVAKRKVSSDvpiLLNVLH 284
Cdd:cd15432 178 ISVLLLLIPLGLILISYIFIVRAVLRIRSAEGRRKAFNTCGSHLLVVsLFYGTAISMYLQPPSNSSHDRGK---MVALFY 254
                       250       260
                ....*....|....*....|...
gi 22128867 285 HVIPAALNPIVYGVRTQEIKQGI 307
Cdd:cd15432 255 GIITPMLNPLIYTLRNKDVKEAL 277
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
46-299 5.79e-30

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 114.46  E-value: 5.79e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15940  18 NILIMITIVMDPRLHTPMYFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFLHLFACTEIFLLTIMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15940  98 RYVAICNPLHYPTVMNHKVCLWLVAALWLGGTVHSLAQTFLTIRLPYCGPNEIDSFFCDVPPVIKLACTDTYLIDILIVS 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAvAKALSTCGSHFILI-LFFSTIllVFILThvaKRKVSSDVPILLNVLH 284
Cdd:cd15940 178 NSGLISLVCFVALLGSYIVILVSLRKRSTEGR-RKALSTCASHLTVVtLFFGPC--IFIYT---RPSTSFSEDKVVSVFY 251
                       250
                ....*....|....*
gi 22128867 285 HVIPAALNPIVYGVR 299
Cdd:cd15940 252 TVVTPLLNPIIYTLR 266
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
46-304 7.08e-30

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 114.45  E-value: 7.08e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15228  18 NLLILSAILSDPRLHTPMYFFLCNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFFYHFLGSTECLLYTVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15228  98 RYVAICHPLRYLLIMNRRVCALLAAGTWITSSFHATILTSLTFTLPYCGSNVVDYFFCDIFPVLKLACADTSIAETVSFT 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFIlthvaKRKVSSDVPILLNVLH 284
Cdd:cd15228 178 NVGLVPLTCFLLILASYVRIVISILKMRSAEGRRKAFSTCSSHLTVVtLFFGPCALIYT-----QPTPSPVLVTPVQIFN 252
                       250       260
                ....*....|....*....|
gi 22128867 285 HVIPAALNPIVYGVRTQEIK 304
Cdd:cd15228 253 NVVTPMLNPLIYTLRNKEVK 272
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
46-309 9.02e-30

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 114.43  E-value: 9.02e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15415  18 NLGMIVLIRINPQLHTPMYFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYSACIAQHFFFAVFVTTEGFLLAVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15415  98 RYVAICNPLLYTVAMTKRVCVQLVAGSYLGGLINSLTHTIGLLKLSFCGPNVINHYFCDIPPLLKLSCSDTHINELLLLT 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFI----LTHVAKRKVSSdvpill 280
Cdd:cd15415 178 FSGVIAMSTLLTIIISYIFILFAILRIRSAEGRRKAFSTCASHLTAVtLFYGSVSFSYIqpssQYSLEQEKVSA------ 251
                       250       260
                ....*....|....*....|....*....
gi 22128867 281 nVLHHVIPAALNPIVYGVRTQEIKQGIKK 309
Cdd:cd15415 252 -VFYTLVIPMLNPLIYSLRNKDVKDALKR 279
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
46-309 1.18e-28

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 111.36  E-value: 1.18e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15407  18 NLGMILLILLDSRLHTPMYFFLSNLSLVDIGYSSAVTPKVMAGLLTGDKVISYNACAAQMFFFVVFATVENFLLASMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15407  98 RHAAVCKPLHYTTTMTTKVCACLTIGCYVCGFLNASIHTGNTFRLSFCKSNVINHFFCDIPPVLALSCSDIHISEIVLFF 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFILTHVAKrkvSSDVPILLNVLH 284
Cdd:cd15407 178 LASFNVFFALLVILISYLFIFITILRMRSAEGHQKAFSTCASHLTAVsIFYGTVIFMYLQPSSSH---SMDTDKMASVFY 254
                       250       260
                ....*....|....*....|....*
gi 22128867 285 HVIPAALNPIVYGVRTQEIKQGIKK 309
Cdd:cd15407 255 TMVIPMLNPLVYSLRNKEVKSAFKK 279
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
46-299 5.95e-27

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 106.52  E-value: 5.95e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15226  18 NLLIVVTVTSDPHLHSPMYFLLANLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFFLHFFGGSEMVLLIAMAFD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQ----FVVKAATFILVRNV-----LITLPipilsarlhYCGRNVIENCICANMSVSRLSCNDV 196
Cdd:cd15226  98 RYVAICKPLHYLTIMSPRmcilLVVASWIIGFIHSLsqlafVVNLP---------FCGPNVVDSFFCDLPLVIKLACTDT 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 197 NVNRLYQFAIGWTLLGSDLFLIFLSYTLILRAVlRLKAEGAVAKALSTCGSHFIL-ILFFSTILLV----FILTHVAKrk 271
Cdd:cd15226 169 YVLELMVVANSGLISLVCFLLLLISYIVILVTV-RKHSSGGSSKALSTCSAHITVvVLFFGPCIFIyvwpFSTFPVDK-- 245
                       250       260
                ....*....|....*....|....*...
gi 22128867 272 vssdvpiLLNVLHHVIPAALNPIVYGVR 299
Cdd:cd15226 246 -------FLAVFYTVITPLLNPIIYTLR 266
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
46-310 2.49e-26

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 105.25  E-value: 2.49e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15418  19 NLTLIALICLDSRLHTPMYFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFFFSAGLAYSECFLLAAMAYD 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNV-NRLYQF 204
Cdd:cd15418  99 RYVAICNPLLYSSAMSKKLCMGLVAASYLGGFANAIIHTSNTFRLHFCGDNIIDHFFCDLPPLVKLACDDTRVyELILYF 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 205 AIGWTLLGSDLfLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFIL---THVAKR-KVSSdvpil 279
Cdd:cd15418 179 ILGFNVIAPTA-LILASYTFILAAILRIHSASGRHKAFSTCSAHLTSVtLYYGSILFIYSRpssSHTPDRdKVVA----- 252
                       250       260       270
                ....*....|....*....|....*....|.
gi 22128867 280 lnVLHHVIPAALNPIVYGVRTQEIKQGIKKL 310
Cdd:cd15418 253 --LFYTVVNPLLNPLIYSLRNKDVKEALKKL 281
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
45-304 5.13e-26

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 104.04  E-value: 5.13e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  45 ANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAF 124
Cdd:cd15405  17 GNLGLITLICLNSHLHTPMYFFLFNLSFIDLCYSSVFTPKMLMNFVSEKNTISYAGCMTQLFFFCFFVISECYVLTAMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 125 DRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQF 204
Cdd:cd15405  97 DRYVAICNPLLYTVTMSPQVCSLLMLGSYVMGFAGAMAHTGCMLRLTFCDSNIINHYMCDILPLLQLSCTSTYVNELVVF 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 205 AIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFI----LTHVAKRKVSSdvpil 279
Cdd:cd15405 177 VVVGINIIVPSVTIFISYALILSNILHISSTEGRSKAFSTCSSHIIAVsLFFGSGAFMYLkpssVGSVNQGKVSS----- 251
                       250       260
                ....*....|....*....|....*
gi 22128867 280 lnVLHHVIPAALNPIVYGVRTQEIK 304
Cdd:cd15405 252 --VFYTNVVPMLNPLIYSLRNKDVK 274
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
42-304 5.76e-26

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 104.10  E-value: 5.76e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15233  14 TIGGNLSILAAILLEPKLHTPMYFFLGNLSLLDIGCISVTVPQMLVHLLSHKRTISYAACLSQLFFFHLLAGADCFLLTA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSII---TDQFVVKAATFILVRNVLITlpiPILSARLHYCGRNVIENCICANMSVSRLSCNDVNV 198
Cdd:cd15233  94 MAYDRYLAICQPLTYSVRMswrVQTALVGISCACAFTNALTH---TVAMSTLKFCGPNVINHFFCDLPPLFQLSCSSTHL 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 199 NRLYQFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFILTHVAKrkvSSDVP 277
Cdd:cd15233 171 NELLLFVFAFFMALAPCVLIVVSYAHVVAAVLRIRSAEGRRKAFSTCGSHLTVVcIFYGTGVFSYMRLGSVY---SSDKD 247
                       250       260
                ....*....|....*....|....*..
gi 22128867 278 ILLNVLHHVIPAALNPIVYGVRTQEIK 304
Cdd:cd15233 248 KVIGILNTVLSPMLNPLIYSLRNKDVK 274
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
46-307 6.34e-26

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 103.77  E-value: 6.34e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHE-PMYYLLSLLSMLDIILCLTVIPKVLAIFW-FDLRAIGFPACFLQMYIMNSFLAMESCTFMIMA 123
Cdd:cd15941  18 NLLILLTIGSDPHLHGlPMYHFLGHLSFLDACLSSVTVPKVLAGLLtLSGRTISFEGCVVQLYAFHFLASTECFLYTVMA 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 124 FDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQ 203
Cdd:cd15941  98 YDRYLAICHPLHYPTAMNRRMCAGLAGGTWATGATHAAIHTSLTFRLPYCGPCQIAYFFCDIPPVLKLACADTTINELVI 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 204 FAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFsTILLVFILTHVAKRKVSSDVPIllnVL 283
Cdd:cd15941 178 LANIGIVAAGCFLLIVISYIYIVAAVLRIRTAEGRQRAFSTCSAHLTGVLLY-YVPSVFIYLQPSSSQAGAGAPA---VF 253
                       250       260
                ....*....|....*....|....
gi 22128867 284 HHVIPAALNPIVYGVRTQEIKQGI 307
Cdd:cd15941 254 YTIVTPMLNPFIYTLRNKEVKRAL 277
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
46-299 1.71e-25

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 102.53  E-value: 1.71e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHE-PMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAF 124
Cdd:cd15935  18 NLLIVVTVHADPHLLQsPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFLHFLGGSEMLLLTLMAY 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 125 DRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQF 204
Cdd:cd15935  98 DRYVAICHPLRYLAVMNRQLCIKLLAACWAGGFLHSATQAALVLRLPFCGPNELDNFYCDVPQVIKLACMDTYVVEVLMV 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 205 AiGWTLLGSDLFLIFL-SYTLILrAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFIlthvaKRKVSSDVPILLNV 282
Cdd:cd15935 178 A-NSGLLSLVCFLVLLvSYGIIL-TTLRGRFREGGGKALSTCSSHLTVVsLIFVPCIFVYL-----RPFSSSSVDKVASV 250
                       250
                ....*....|....*..
gi 22128867 283 LHHVIPAALNPIVYGVR 299
Cdd:cd15935 251 FYTLITPALNPLIYTLR 267
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
46-304 3.06e-25

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 102.13  E-value: 3.06e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15942  18 NSLIILVVISDLQLHKPMYWFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVTQLFFFHFLGCAECFLYTVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15942  98 RFLAICKPLHYSTIMNHRACLCLSLGTWLGGCLHSTFQTSLTFRLPYGQKNEVDYIFCDIPAMLKLACADTAFNELVTFI 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILILFFsTILLVFILTHVAKRKVSSDVpilLNVLHH 285
Cdd:cd15942 178 DIGLVAMTCFLLILMSYVYIVSAILKIPSAEGQRRAFSTCTAHLTVVVIY-YVPLTFIYLRPGSQDPLDGV---VAVFYT 253
                       250
                ....*....|....*....
gi 22128867 286 VIPAALNPIVYGVRTQEIK 304
Cdd:cd15942 254 TVTPLLNPVIYTLRNKEMK 272
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
43-299 3.12e-25

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 101.91  E-value: 3.12e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  43 MGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIM 122
Cdd:cd15939  15 VLGNLLIVVTIKASQTLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFAEHFFGGAEIFLLTVM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 123 AFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLY 202
Cdd:cd15939  95 AYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFPLLKLACTDTYVIGLL 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 203 QFAIGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAvAKALSTCGSHFI-LILFFSTILLVFIlthvakRKVSSdVPI--L 279
Cdd:cd15939 175 VVANSGLICLLSFLILLISYIVILYSLRTHSSEGR-RKALSTCGSHITvVVLFFVPCIFIYM------RPVTT-FPIdkV 246
                       250       260
                ....*....|....*....|
gi 22128867 280 LNVLHHVIPAALNPIVYGVR 299
Cdd:cd15939 247 VAVFYTIITPMLNPLIYTLR 266
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
46-299 8.90e-25

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 100.72  E-value: 8.90e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15938  18 NLLIMVTVRSDPKLSSPMYFLLGNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFFLHFVGAAEMFLLTVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15938  98 RYVAICKPLHYTTIMSRRLCWVLVAASWAGGFLHSIVQTLLTIQLPFCGPNQVNNFFCDVPPVIKLACTDTCVTELLMVS 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILravLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFilthvAKRKVSSDVPILLNVLH 284
Cdd:cd15938 178 NSGLISTVCFVVLVTSYTTIL---VTIRSTEGRRKALSTCASHLMVVtLFFGPCIFIY-----ARPFSTFPVDKHVSVLY 249
                       250
                ....*....|....*
gi 22128867 285 HVIPAALNPIVYGVR 299
Cdd:cd15938 250 NVITPMLNPLIYTLR 264
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
45-299 1.70e-21

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 91.72  E-value: 1.70e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  45 ANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAF 124
Cdd:cd15937  17 GNILIILTIQGDPQLGSPMYFFLANLALLDICYSSITPPKMLADFFSERKTISYGGCMAQLFFLHFLGAAEMFLLVAMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 125 DRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQF 204
Cdd:cd15937  97 DRYVAICKPLHYTTVVNRRVCCVLVGASWAGGFIHSIIQVALIIRLPFCGPNVLDNFFCDITQVIKLACTNTYTVELLMF 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 205 AIGWTLLGSDLFLIFLSYTLILrAVLRLKAEGAVAKALSTCGSHfILILFFSTILLVFILTHvAKRKVSSDVpiLLNVLH 284
Cdd:cd15937 177 SNSGLVILLCFLLLLISYAFLL-AKLRTHSSKGKSKAASTCITH-IIIVFVMFGPAIYIYAR-PFRSFPMDK--VVAVFH 251
                       250
                ....*....|....*
gi 22128867 285 HVIPAALNPIVYGVR 299
Cdd:cd15937 252 TVIFPLLNPMIYTLR 266
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
46-299 6.67e-21

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 90.09  E-value: 6.67e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15936  18 NLLIIITVISDPHLHTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFFHFTGGAEVFLLSVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15936  98 RYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSIVQVALLLQLPFCGPNVLDNFYCDVPQVIKLACTDTFLLELLMVS 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAvAKALSTCGSHFILI-LFFstILLVFILTHvAKRKVSSDVpiLLNVLH 284
Cdd:cd15936 178 NSGLVTLLIFFILLISYTVILVKIRTHVTEGK-RKALSTCASQITVVtLIF--VPCIYIYAR-PFQTFPMDK--AVSVLY 251
                       250
                ....*....|....*
gi 22128867 285 HVIPAALNPIVYGVR 299
Cdd:cd15936 252 TVITPMLNPMIYTLR 266
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
46-304 1.12e-20

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 89.47  E-value: 1.12e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFD 125
Cdd:cd15433  18 NTIIILLSVRDLRLHTPMYYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFISLALGSAECVLLAVMAFD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 126 RYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVIENCICANMSVSRLSCNDVNVNRLYQFA 205
Cdd:cd15433  98 RYAAVCRPLHYAALMSPRLCQTLASISWLSGFVNSVAQTGLLAERPLCGHRLLDHFFCEMPVFLKLACGDDETTEVQMFV 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 206 IGWTLLGSDLFLIFLSYTLILRAVLRLKAEGAVAKALSTCGSHFILI-LFFSTILLVFILthvAKRKVSSDVPILLNVLH 284
Cdd:cd15433 178 ARVVILLLPAALILGSYGHVAHAVLRIKSSAGRRRAFGTCGSHLMVVfLFYGSAIYTYLQ---PIHRYSQAHGKFVSLFY 254
                       250       260
                ....*....|....*....|
gi 22128867 285 HVIPAALNPIVYGVRTQEIK 304
Cdd:cd15433 255 TVMTPALNPLIYTLRNKDVK 274
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
46-296 2.56e-14

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 71.56  E-value: 2.56e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867    46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLR-AIGFPACFLQMYIMNSFLAMESCTFMIMAF 124
Cdd:pfam00001   2 NLLVILVILRNKKLRTPTNIFLLNLAVADLLFSLLTLPFWLVYYLNHGDwPFGSALCKIVGALFVVNGYASILLLTAISI 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867   125 DRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHYCGRNVienCICANMSVSRLSCNDVnvnrlyqF 204
Cdd:pfam00001  82 DRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVPEGNV---TVCFIDFPEDLSKPVS-------Y 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867   205 AIGWTLLGS--DLFLIFLSYTLILRAVL-------RLKAEGAVAKALSTCGSHFIL--ILFFSTILLVFILTHVAKRKVS 273
Cdd:pfam00001 152 TLLISVLGFllPLLVILVCYTLIIRTLRksaskqkSSERTQRRRKALKTLAVVVVVfiLCWLPYHIVNLLDSLALDCELS 231
                         250       260
                  ....*....|....*....|....*
gi 22128867   274 SDVPILLNVLHHVIPA--ALNPIVY 296
Cdd:pfam00001 232 RLLDKALSVTLWLAYVnsCLNPIIY 256
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
74-299 9.31e-12

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 64.23  E-value: 9.31e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  74 DIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFDRYIAICHPLRYPSIITDQFVVKAATFIL 153
Cdd:cd00637  44 DLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQSVSLLASILTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIW 123
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 154 VRNVLITLPIPILSARLHYCGRNVIENCicanmsvsrlsCNDVNVNRLYQFAIGWTLLGSDLFLIFLSYTLILRAVLRLK 233
Cdd:cd00637 124 LLSLLLALPPLLGWGVYDYGGYCCCCLC-----------WPDLTLSKAYTIFLFVLLFLLPLLVIIVCYVRIFRKLRRHR 192
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 234 AEGAVAKALSTCGSH------------FILILFFSTIL--LVFILTHVAKRKVSSDVPILLNVLH--HVIPAALNPIVYG 297
Cdd:cd00637 193 RRIRSSSSNSSRRRRrrrerkvtktllIVVVVFLLCWLpyFILLLLDVFGPDPSPLPRILYFLALllAYLNSAINPIIYA 272

                ..
gi 22128867 298 VR 299
Cdd:cd00637 273 FF 274
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
46-306 3.32e-07

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 50.82  E-value: 3.32e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLD-IILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAF 124
Cdd:cd14979  18 NLLTCIVIARHKSLRTTTNYYLFSLAVSDlLILLVGLPVELYNFWWQYPWAFGDGGCKLYYFLFEACTYATVLTIVALSV 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 125 DRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPIPILSARLHycgRNVIENCICANMSVSRLSCNDVNVNRLYQF 204
Cdd:cd14979  98 ERYVAICHPLKAKTLVTKRRVKRFILAIWLVSILCAIPILFLMGIQY---LNGPLPGPVPDSAVCTLVVDRSTFKYVFQV 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 205 AIGWTLLgSDLFLIFLSYTLILRAV--LRLKAEGAVAKALSTCG------SHFILILFFSTILLVFILT----HVAK--- 269
Cdd:cd14979 175 STFIFFV-LPMFVISILYFRIGVKLrsMRNIKKGTRAQGTRNVElslsqqARRQVVKMLGAVVIAFFVCwlpfHAQRlmf 253
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 22128867 270 RKVSSDVPILLNVLHHVIP---------AALNPIVYGVRTQEIKQG 306
Cdd:cd14979 254 SYASKEDTFLFDFYQYLYPisgilfylsSAINPILYNLMSSRFRVA 299
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
45-307 7.57e-06

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 46.40  E-value: 7.57e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  45 ANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIP-----KVLAIFWFDLRAIGFPACFLQMYIMNSflameSCTF 119
Cdd:cd14967  16 GNLLVILAVYRNRRLRTVTNYFIVSLAVADLLVALLVMPfsavyTLLGYWPFGPVLCRFWIALDVLCCTAS-----ILNL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 120 MIMAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPiPILSARLHYCGRNVIENCicanmsvsrlscnDVNVN 199
Cdd:cd14967  91 CAISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISLP-PLVGWRDETQPSVVDCEC-------------EFTPN 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 200 RLYQFAIGWTLLGSDLFLIFLSYTLILRAVLR-LKAegavAKALSTCGSHFILI-LFFSTILLVFIltHVAKRKVSSDVP 277
Cdd:cd14967 157 KIYVLVSSVISFFIPLLIMIVLYARIFRVARReLKA----AKTLAIIVGAFLLCwLPFFIIYLVSA--FCPPDCVPPILY 230
                       250       260       270
                ....*....|....*....|....*....|
gi 22128867 278 ILLNVLhHVIPAALNPIVYGVRTQEIKQGI 307
Cdd:cd14967 231 AVFFWL-GYLNSALNPIIYALFNRDFRRAF 259
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
74-206 2.47e-05

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 45.32  E-value: 2.47e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  74 DIILCLTVIPKVLAIF---WFDLRAIGFPACFLQ--MYIMNSFLAMESCTFMIMAFDRYIAICHPLRYPSIITDQFVVKA 148
Cdd:cd14978  45 DILVLLSALPLFLLPYiadYSSSFLSYFYAYFLPyiYPLANTFQTASVWLTVALTVERYIAVCHPLKARTWCTPRRARRV 124
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 22128867 149 ATFILVRNVLITLPIPILsarlhycgRNVIENCICANMSVSRLSCNDVNVNRLYQFAI 206
Cdd:cd14978 125 ILIIIIFSLLLNLPRFFE--------YEVVECENCNNNSYYYVIPTLLRQNETYLLKY 174
7tmA_GPR39 cd15135
G protein-coupled receptor 39, member of the class A family of seven-transmembrane G ...
122-229 1.06e-04

G protein-coupled receptor 39, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR39 is an orphan G protein-coupled receptor that belongs to the growth hormone secretagogue and neurotensin receptor subfamily. GPR39 is expressed in peripheral tissues such as pancreas, gut, gastrointestinal tract, liver, kidney as well as certain regions of the brain. The divalent metal ion Zn(2+) has been shown to be a ligand capable of activating GPR39. Thus, it has been suggested that GPR39 function as a G(q)-coupled Zn(2+)-sensing receptor which involved in the regulation of endocrine pancreatic function, body weight, gastrointestinal mobility, and cell death.


Pssm-ID: 320263 [Multi-domain]  Cd Length: 320  Bit Score: 43.25  E-value: 1.06e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQfVVKAATFILVRNVLITLP-------------IPILSARLHYCGRNVIENCICANMSv 188
Cdd:cd15135  99 LSFERYIAICHPFKYKALSGSR-VRLLICFVWLTSALVALPllfamgtedpleaFPSYRGTRHHCQDQKSNLTICTSLS- 176
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 22128867 189 SRlscndvnvnrlyqfaigWTLLGSDLFLIFLSYTLILRAV 229
Cdd:cd15135 177 SK-----------------WTVFQASIFSAFVLYLLVLASV 200
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
74-244 5.03e-04

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 41.05  E-value: 5.03e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  74 DIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFDRYIAICHPLRYPSIITDQFVVKAATFIL 153
Cdd:cd14993  46 DLLVSLFCMPLTLLENVYRPWVFGEVLCKAVPYLQGVSVSASVLTLVAISIDRYLAICYPLKARRVSTKRRARIIIVAIW 125
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 154 VRNVLITLPIPILsarlhycgRNVIENCICANMSVSRLSCNDV----NVNRLYQFAIGWTLLGSDLFLIFLSYTLILRAV 229
Cdd:cd14993 126 VIAIIIMLPLLVV--------YELEEIISSEPGTITIYICTEDwpspELRKAYNVALFVVLYVLPLLIISVAYSLIGRRL 197
                       170
                ....*....|....*
gi 22128867 230 LRLKAEGAVAKALST 244
Cdd:cd14993 198 WRRKPPGDRGSANST 212
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
101-154 5.06e-04

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 41.00  E-value: 5.06e-04
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 22128867 101 CFLQMYIMNSFLAMESCTFMIMAFDRYIAICHPLRYPSIITdqfVVKAATFILV 154
Cdd:cd15055  73 CKLHSSLDYILTSASIFNLVLIAIDRYVAVCDPLLYPTKIT---IRRVKICICL 123
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
74-163 6.66e-04

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 40.72  E-value: 6.66e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  74 DIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMIMAFDRYIAICHPLRYPSIITDQFVVKAATFIL 153
Cdd:cd15001  45 DLLLLVFCVPLKTAEYFSPTWSLGAFLCKAVAYLQLLSFICSVLTLTAISIERYYVILHPMKAKSFCTIGRARKVALLIW 124
                        90
                ....*....|
gi 22128867 154 VRNVLITLPI 163
Cdd:cd15001 125 ILSAILASPV 134
7tmA_CCK_R cd15206
cholecystokinin receptors, member of the class A family of seven-transmembrane G ...
74-296 6.81e-04

cholecystokinin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320334 [Multi-domain]  Cd Length: 269  Bit Score: 40.45  E-value: 6.81e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  74 DIILCL-----TVIPKVLAIFWFdlraiGFPACFLQMYIMNSFLAMESCTFMIMAFDRYIAICHPLRYPSIITDQFVVKA 148
Cdd:cd15206  46 DLLLAVfcmpfTLVGQLLRNFIF-----GEVMCKLIPYFQAVSVSVSTFTLVAISLERYFAICHPLKSRVWQTLSHAYKV 120
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 149 ATFILVRNVLITLPIPILSaRLHYCGRNVIENCicanmsvsRLSCNDVNVNRLYQFAIGWTLLGSDLFLIFLSYTLILRA 228
Cdd:cd15206 121 IAGIWLLSFLIMSPILVFS-NLIPMSRPGGHKC--------REVWPNEIAEQAWYVFLDLMLLVIPGLVMSVAYGLISWT 191
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 22128867 229 VlrLKAEGAVAKALSTcgshfILILFFSTILLVFIL-------THVAKRKVSSdVPILLNVLHHVIPAALNPIVY 296
Cdd:cd15206 192 L--LEAKKRVIRMLFV-----IVVEFFICWTPLYVIntwkafdPPSAARYVSS-TTISLIQLLAYISSCVNPITY 258
7tmA_Adenosine_R_A2B cd15069
adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G ...
42-141 7.78e-04

adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2B receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320197 [Multi-domain]  Cd Length: 294  Bit Score: 40.69  E-value: 7.78e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAI---FWFDLRAIGFPACFLQMYIMNSFLAMesct 118
Cdd:cd15069  14 SVAGNVLVCAAVGTNSTLQTPTNYFLVSLAAADVAVGLFAIPFAITIslgFCTDFHSCLFLACFVLVLTQSSIFSL---- 89
                        90       100
                ....*....|....*....|...
gi 22128867 119 fMIMAFDRYIAICHPLRYPSIIT 141
Cdd:cd15069  90 -LAVAVDRYLAIKVPLRYKSLVT 111
7tmA_TAAR5 cd15318
trace amine-associated receptor 5, member of the class A family of seven-transmembrane G ...
46-141 1.76e-03

trace amine-associated receptor 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptor 5 is one of the 15 identified amine-activated G protein-coupled receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320441 [Multi-domain]  Cd Length: 282  Bit Score: 39.46  E-value: 1.76e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIP----KVLAIFWFdlraIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15318  18 NLFVVVTVSHFKALHTPTNFLLLSLALADMLLGLTVLPfstiRSVESCWY----FGDSFCRLHTCLDTLFCLTSIFHLCF 93
                        90       100
                ....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIIT 141
Cdd:cd15318  94 ISIDRHCAICDPLLYPSKFT 113
7tmA_TAAR5-like cd15317
trace amine-associated receptor 5 and similar receptors, member of the class A family of ...
46-143 2.82e-03

trace amine-associated receptor 5 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR5, TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified trace amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320440 [Multi-domain]  Cd Length: 290  Bit Score: 38.97  E-value: 2.82e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  46 NAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIP----KVLAIFWFdlraIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15317  18 NLVVIISISHFKQLHSPTNMLVLSLATADFLLGLCVMPfsmiRTVETCWY----FGDLFCKFHTGLDLLLCTTSIFHLCF 93
                        90       100
                ....*....|....*....|..
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQ 143
Cdd:cd15317  94 IAIDRYYAVCDPLRYPSKITVQ 115
7tmA_Opsin_Gq_invertebrates cd15337
invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled ...
42-235 3.58e-03

invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The invertebrate Gq-coupled opsin subfamily includes the arthropod and mollusc visual opsins. Like the vertebrate visual opsins, arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. The invertebrate Gq opsins are closely related to the vertebrate melanopsins, the primary photoreceptor molecules for non-visual responses to light, and the R1-R6 photoreceptors, which are the fly equivalent to the vertebrate rods. The Gq opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320459 [Multi-domain]  Cd Length: 292  Bit Score: 38.46  E-value: 3.58e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAI-GFPACFLQMYIMNSFLAMESCTFM 120
Cdd:cd15337  14 GVIGNLLVIYLFSKTKSLRTPSNMFIINLAISDFGFSAVNGFPLKTISSFNKKWIwGKVACELYGFAGGIFGFMSITTLA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 121 IMAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPiPILSArlhycGRNVIENCICaNMSVSRLScNDVNvNR 200
Cdd:cd15337  94 AISIDRYLVIAKPLEAMKKMTFKRAFIMIIIIWLWSLLWSIP-PFFGW-----GRYVPEGFQT-SCTFDYLS-RDLN-NR 164
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 22128867 201 LyqFAIGWTLLG--SDLFLIFLSYTLILRAVLRLKAE 235
Cdd:cd15337 165 L--FILGLFIFGflCPLLIIIFCYVNIIRAVRNHEKE 199
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
42-231 9.31e-03

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 37.31  E-value: 9.31e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867  42 AMGANAILLITIRMEASLHEPMYYLLSLLSMLDIILCLTVIPKVLAIFWFDLRAIGFPACFLQMYIMNSFLAMESCTFMI 121
Cdd:cd15083  14 GVVGNGLVIYAFCRFKSLRTPANYLIINLAISDFLMCILNCPLMVISSFSGRWIFGKTGCDMYGFSGGLFGIMSINTLAA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128867 122 MAFDRYIAICHPLRYPSIITDQFVVKAATFILVRNVLITLPiPILSarlhyCGRNVIENCICaNMSVSRLSCNDvnVNRL 201
Cdd:cd15083  94 IAVDRYLVITRPMKASVRISHRRALIVIAVVWLYSLLWVLP-PLFG-----WSRYVLEGLLT-SCSFDYLSRDD--ANRS 164
                       170       180       190
                ....*....|....*....|....*....|
gi 22128867 202 YQFAIGWTLLGSDLFLIFLSYTLILRAVLR 231
Cdd:cd15083 165 YVICLLIFGFVLPLLIIIYCYSFIFRAVRR 194
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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