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Conserved domains on  [gi|24644448|ref|NP_731020|]
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uncharacterized protein Dmel_CG1213, isoform B [Drosophila melanogaster]

Protein Classification

sugar porter family MFS transporter( domain architecture ID 13024188)

sugar porter family major facilitator superfamily (MFS) transporter facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of sugar or polyol substrates such as glucose, galactose, trehalose, and arabinose, among others

CATH:  1.20.1250.20
SCOP:  3000310
TCDB:  2.A.1.1

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
43-481 3.60e-162

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 466.28  E-value: 3.60e-162
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  43 FMAAVAANLSAFVVGTTLGWTSPIGPKLksedTSDSPLSRPITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLS 122
Cdd:cd17358   1 LLATFVANLGSFSFGIAVGWSSPALPSL----MSDNSLSLPLTVAQFSWFGSLLTLGALIGALLSGKLADRIGRKRTLLI 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 123 SSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYVSYQ 202
Cdd:cd17358  77 SAIPCILGWLLIAFAKDVWMLYLGRFLAGFGGGAASVVVPVYIAEIAPKNVRGALGSLNQLLVNIGILLGYVLGSFLPWR 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 203 ALQWCCIVVPVVFDLVFYMMPESPYFFAGKGRKSEALKSLQFLRGQSAEgVHDEMAEIQANVEEAMA-SKGTVMDLFKNA 281
Cdd:cd17358 157 TLALIGAIPPVVFLILLFFIPESPRWLAKKGREEEAEKSLQFLRGKDAD-ISKEAAEIQEELAELEKeAKESSFSDLFQR 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 282 GNRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGLDPAIATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMS 361
Cdd:cd17358 236 KYLKPLVIGLGLMLFQQLSGINAVIFYASSIFDEAGSGLDPNTATIIIGVVQVVGTLVATLLVDRLGRRPLLLVSAIGMG 315
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 362 IGLAALGAFFYMQLVKGDISSVVWMPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFY 441
Cdd:cd17358 316 IGLLALGLYFYLQEHGALLSSVSWLPLVGLVIYIISFSIGLGPLPWVIMSEIFPAKIKGLAGSLVTLVNWLFAFIVTKTF 395
                       410       420       430       440
                ....*....|....*....|....*....|....*....|.
gi 24644448 442 PSL-DALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQ 481
Cdd:cd17358 396 PFLtLAWGASGTFWIFAGICGLALVFVLLFVPETKGKSLEE 436
 
Name Accession Description Interval E-value
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
43-481 3.60e-162

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 466.28  E-value: 3.60e-162
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  43 FMAAVAANLSAFVVGTTLGWTSPIGPKLksedTSDSPLSRPITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLS 122
Cdd:cd17358   1 LLATFVANLGSFSFGIAVGWSSPALPSL----MSDNSLSLPLTVAQFSWFGSLLTLGALIGALLSGKLADRIGRKRTLLI 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 123 SSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYVSYQ 202
Cdd:cd17358  77 SAIPCILGWLLIAFAKDVWMLYLGRFLAGFGGGAASVVVPVYIAEIAPKNVRGALGSLNQLLVNIGILLGYVLGSFLPWR 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 203 ALQWCCIVVPVVFDLVFYMMPESPYFFAGKGRKSEALKSLQFLRGQSAEgVHDEMAEIQANVEEAMA-SKGTVMDLFKNA 281
Cdd:cd17358 157 TLALIGAIPPVVFLILLFFIPESPRWLAKKGREEEAEKSLQFLRGKDAD-ISKEAAEIQEELAELEKeAKESSFSDLFQR 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 282 GNRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGLDPAIATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMS 361
Cdd:cd17358 236 KYLKPLVIGLGLMLFQQLSGINAVIFYASSIFDEAGSGLDPNTATIIIGVVQVVGTLVATLLVDRLGRRPLLLVSAIGMG 315
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 362 IGLAALGAFFYMQLVKGDISSVVWMPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFY 441
Cdd:cd17358 316 IGLLALGLYFYLQEHGALLSSVSWLPLVGLVIYIISFSIGLGPLPWVIMSEIFPAKIKGLAGSLVTLVNWLFAFIVTKTF 395
                       410       420       430       440
                ....*....|....*....|....*....|....*....|.
gi 24644448 442 PSL-DALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQ 481
Cdd:cd17358 396 PFLtLAWGASGTFWIFAGICGLALVFVLLFVPETKGKSLEE 436
Sugar_tr pfam00083
Sugar (and other) transporter;
91-483 3.73e-75

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 243.33  E-value: 3.73e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448    91 WISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAfGLNMVASE----VWILYMSRLIQGFGVGFVMTVQPMYVG 166
Cdd:pfam00083  50 LIVSIFSVGCFIGSLFAGKLGDRFGRKKSLLIANVLFVIG-AVLQGAAKgkwsVYQLIVGRVLVGIGVGGASVLAPMYIS 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   167 EISTDNVRGATGSLMQLFIVGGILYVYAIG-------PYVSYQALQWCCIVVPVVFDLVFYMMPESPYFFAGKGRKSEAL 239
Cdd:pfam00083 129 EIAPKKLRGALGSLYQLAITFGILLAYIFGlglnktsNSDGWRIPLGLQLVPALLLIIGLLFLPESPRWLVEKGRLEEAR 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   240 KSLQFLRGQsaEGVHDEMAEIQANVEEAM-ASKGTVMDLFKNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFASAnt 318
Cdd:pfam00083 209 EVLAKLRGV--PDVDRELDEIKDSLEAGQeAEKASWKELFSTKTRRQRLLIGVMLQIFQQLTGINAIFYYSTTIFENL-- 284
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   319 GL-DPAIATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMQLVKGDISSVVwmPVPALIIYNIV 397
Cdd:pfam00083 285 GLsDSFLVTIIVGVVNFVFTFIAIFLVDRFGRRPLLLLGAAGMAICFVILGIVALLGVSKSDWAGIV--AIVFIALFIAF 362
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   398 YCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSL-DALGSYYAFWLFAVCMVVAFFFVLFVVMETKG 476
Cdd:pfam00083 363 FAMGWGPVPWVIVSELFPLSVRSKAMALATAANWLANFLIGFLFPIItDAIGLGYTFFIFAGLLVLFIIFVFFFVPETKG 442

                  ....*..
gi 24644448   477 LSLQQIQ 483
Cdd:pfam00083 443 RTLEEID 449
SP TIGR00879
MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of ...
42-482 3.75e-63

MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273317 [Multi-domain]  Cd Length: 481  Bit Score: 212.97  E-value: 3.75e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448    42 IFMAAVAANLSAF---VVGTTLGWtsPIGPKLKSEDTSDSPLSRpitsdEDAWISSLIAVGALVAPFVAGPMADRIGRKW 118
Cdd:TIGR00879  30 SLIAAIGGLMFGYdtgVIGGALAL--PAFEFKFTSANSDSYSSS-----LWGLVVSIFLVGGFIGALFAGWLSDRFGRKK 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   119 VLLSSSLFFVLAFGLNMVAS---EVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAI 195
Cdd:TIGR00879 103 SLLIIALLFVIGAILMGLAAfalSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGF 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   196 GPY--VSYQALQWC-----CIVVPVVFDLVFYMMPESPYFFAGKGRKSEALKSLQFLRGQSAE--GVHDEMAEIQANVEE 266
Cdd:TIGR00879 183 GSGkvSLNNTLGWRiplglQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEdkELLDELELIDIKRSI 262
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   267 AMASKGTVMDLFKNAGNR--RALFICAGLISFQQLSGINVVLFNSQSIFASAN-TGLDPAIATIIIGCVQVGSSALTPLV 343
Cdd:TIGR00879 263 EKRSVQPSWGSLFSSTRRirRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGvSTDHAFLVSIIVGAVNFAFTFVAIFL 342
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   344 ADRLGRKVMLLTSSSVMSIGLAALGAFFYMqLVKGDISSVVWMPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVAS 423
Cdd:TIGR00879 343 VDRFGRRPLLLIGAAGMAICLFVLGILGAS-FVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGI 421
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   424 SVVASTCWTLGFLVTFFYPS-LDALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQI 482
Cdd:TIGR00879 422 SIAVAANWLANFIVGFLFPTmLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLEEI 481
xylE PRK10077
D-xylose transporter XylE; Provisional
93-483 1.18e-34

D-xylose transporter XylE; Provisional


Pssm-ID: 182225 [Multi-domain]  Cd Length: 479  Bit Score: 135.59  E-value: 1.18e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   93 SSLIavGALVAPFVAGPMADRIGRKWVL-LSSSLFFVLAFGL-------------NMVASEVWILYmsRLIQGFGVGFVM 158
Cdd:PRK10077  63 SALI--GCIIGGALGGYCSNRFGRRDSLkIAAVLFFISALGSawpefgftsigpdNTGYVPEFVIY--RIIGGIGVGLAS 138
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  159 TVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYVSYQ-ALQWCC-----------IVVPVVFDLVFYMMPESP 226
Cdd:PRK10077 139 MLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSgDASWLNtdgwrymfaseAIPALLFLMLLYFVPETP 218
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  227 YFFAGKGRKSEALKSLQFLRGQSAEGvhDEMAEIQANVEEAMASKGTvmdLFKNAgnrrALFICAG--LISFQQLSGINV 304
Cdd:PRK10077 219 RYLMSRGKQEQAEGILRKIMGNTLAT--QALQEIKHSLDHGRKTGGK---LLMFG----VGVIVIGvmLSVFQQFVGINV 289
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  305 VLFNSQSIFASANTGLDPA-IATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMQLvKGDIssv 383
Cdd:PRK10077 290 VLYYAPEIFKTLGASTDIAlLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQA-PGIV--- 365
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  384 vwmPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSLDALGSY-------YAFWLF 456
Cdd:PRK10077 366 ---ALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLvahfhngFSYWIY 442
                        410       420
                 ....*....|....*....|....*..
gi 24644448  457 AVCMVVAFFFVLFVVMETKGLSLQQIQ 483
Cdd:PRK10077 443 GCMGVLAALFMWKFVPETKGKTLEEME 469
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
36-428 9.25e-20

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 90.42  E-value: 9.25e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  36 PVKSGRIFMAAVAANLSAFVVGTTLGWTSPIGPKLKSEDTsdsplsrpITSDEDAWISSLIAVGALVAPFVAGPMADRIG 115
Cdd:COG2814   2 PATPRRRWLALLALALGAFLSGLGIGIVLPALPLIAADLG--------ASPAQAGLVVTAYLLGAALGAPLAGRLADRFG 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 116 RKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGI----LY 191
Cdd:COG2814  74 RRRVLLLGLLLFALGSLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPalgpLL 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 192 VYAIGPYVSYQALQWCCIVVPVV-FDLVFYMMPESPyffagkgrksealkslqflrgqsaegvhdemaeiqanVEEAMAS 270
Cdd:COG2814 154 GGLLADLFGWRWVFLVNAVLALLaLLLLLRLLPESR-------------------------------------PAARARL 196
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 271 KGTVMDLFKNAGNRRALFICAGlisfqqLSGINVVLFNSQSIFASANTGLDPAIATIIIGCVQVGSSALTPLV---ADRL 347
Cdd:COG2814 197 RGSLRELLRRPRLLLLLLLAFL------LGFGFFALFTYLPLYLQEVLGLSASAAGLLLALFGLGGVLGALLAgrlADRF 270
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 348 GRKVMLLTSSSVMSIGLAALGaffymqlvkgdISSVVWMPVPALIIYNIVYcTGFGPLPWAVLGEMFPANIKSVASSVVA 427
Cdd:COG2814 271 GRRRLLLIGLLLLALGLLLLA-----------LAGSLWLLLLALFLLGFGF-GLLFPLLQALVAELAPPEARGRASGLYN 338

                .
gi 24644448 428 S 428
Cdd:COG2814 339 S 339
 
Name Accession Description Interval E-value
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
43-481 3.60e-162

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 466.28  E-value: 3.60e-162
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  43 FMAAVAANLSAFVVGTTLGWTSPIGPKLksedTSDSPLSRPITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLS 122
Cdd:cd17358   1 LLATFVANLGSFSFGIAVGWSSPALPSL----MSDNSLSLPLTVAQFSWFGSLLTLGALIGALLSGKLADRIGRKRTLLI 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 123 SSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYVSYQ 202
Cdd:cd17358  77 SAIPCILGWLLIAFAKDVWMLYLGRFLAGFGGGAASVVVPVYIAEIAPKNVRGALGSLNQLLVNIGILLGYVLGSFLPWR 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 203 ALQWCCIVVPVVFDLVFYMMPESPYFFAGKGRKSEALKSLQFLRGQSAEgVHDEMAEIQANVEEAMA-SKGTVMDLFKNA 281
Cdd:cd17358 157 TLALIGAIPPVVFLILLFFIPESPRWLAKKGREEEAEKSLQFLRGKDAD-ISKEAAEIQEELAELEKeAKESSFSDLFQR 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 282 GNRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGLDPAIATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMS 361
Cdd:cd17358 236 KYLKPLVIGLGLMLFQQLSGINAVIFYASSIFDEAGSGLDPNTATIIIGVVQVVGTLVATLLVDRLGRRPLLLVSAIGMG 315
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 362 IGLAALGAFFYMQLVKGDISSVVWMPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFY 441
Cdd:cd17358 316 IGLLALGLYFYLQEHGALLSSVSWLPLVGLVIYIISFSIGLGPLPWVIMSEIFPAKIKGLAGSLVTLVNWLFAFIVTKTF 395
                       410       420       430       440
                ....*....|....*....|....*....|....*....|.
gi 24644448 442 PSL-DALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQ 481
Cdd:cd17358 396 PFLtLAWGASGTFWIFAGICGLALVFVLLFVPETKGKSLEE 436
Sugar_tr pfam00083
Sugar (and other) transporter;
91-483 3.73e-75

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 243.33  E-value: 3.73e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448    91 WISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAfGLNMVASE----VWILYMSRLIQGFGVGFVMTVQPMYVG 166
Cdd:pfam00083  50 LIVSIFSVGCFIGSLFAGKLGDRFGRKKSLLIANVLFVIG-AVLQGAAKgkwsVYQLIVGRVLVGIGVGGASVLAPMYIS 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   167 EISTDNVRGATGSLMQLFIVGGILYVYAIG-------PYVSYQALQWCCIVVPVVFDLVFYMMPESPYFFAGKGRKSEAL 239
Cdd:pfam00083 129 EIAPKKLRGALGSLYQLAITFGILLAYIFGlglnktsNSDGWRIPLGLQLVPALLLIIGLLFLPESPRWLVEKGRLEEAR 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   240 KSLQFLRGQsaEGVHDEMAEIQANVEEAM-ASKGTVMDLFKNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFASAnt 318
Cdd:pfam00083 209 EVLAKLRGV--PDVDRELDEIKDSLEAGQeAEKASWKELFSTKTRRQRLLIGVMLQIFQQLTGINAIFYYSTTIFENL-- 284
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   319 GL-DPAIATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMQLVKGDISSVVwmPVPALIIYNIV 397
Cdd:pfam00083 285 GLsDSFLVTIIVGVVNFVFTFIAIFLVDRFGRRPLLLLGAAGMAICFVILGIVALLGVSKSDWAGIV--AIVFIALFIAF 362
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   398 YCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSL-DALGSYYAFWLFAVCMVVAFFFVLFVVMETKG 476
Cdd:pfam00083 363 FAMGWGPVPWVIVSELFPLSVRSKAMALATAANWLANFLIGFLFPIItDAIGLGYTFFIFAGLLVLFIIFVFFFVPETKG 442

                  ....*..
gi 24644448   477 LSLQQIQ 483
Cdd:pfam00083 443 RTLEEID 449
MFS_GLUT8_Class3 cd17433
Glucose transporter type 8, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
43-481 9.47e-72

Glucose transporter type 8, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 8 (GLUT8) is also called Solute carrier family 2, facilitated glucose transporter member 8 (SLC2A8) or glucose transporter type X1 (GLUTX1). It is classified as a Class 3 GLUT protein and is an insulin-regulated facilitative glucose transporter predominantly expressed in testis and brain. It can also transport fructose and galactose. SLC2A8 knockout mice were viable, developed normally, and display only a very mild phenotype, including mild alterations in the brain (increased proliferation of hippocampal neurons), heart (impaired transmission of electrical wave through the atrium), and sperm cells (reduced number of motile sperm cells). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340991 [Multi-domain]  Cd Length: 416  Bit Score: 233.62  E-value: 9.47e-72
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  43 FMAAVAANLSAFVVGTTLGWTSPIGPKLKSEdtsdSPLSRPITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLS 122
Cdd:cd17433   1 FLATFAAVLGPLSFGFVLGYSSPAIPSLQRI----ADPALRLDDAAASWFGSVVTLGAAAGGVLGGWIVDRAGRKLSLML 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 123 SSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYVSYQ 202
Cdd:cd17433  77 CSVPFIAGFTVITAAQNVWMLYVGRLLTGLASGVTSLVVPVYISEIAHPRVRGTLGSCVQLMVVIGIMGAYLAGLVLDWR 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 203 ALQWCCIVVPVVFDLVFYMMPESPYFFAGKGRKSEALKSLQFLRGQSAeGVHDEMAEIQANVEEAMASKGtvMDLFKNAG 282
Cdd:cd17433 157 WLAVLGSIPPTLMLLLMCFMPETPRFLLTQHRRQEAMAALRFLRGPDQ-GWEWECIGIEQSFHLEEQSFS--LALLKQPG 233
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 283 NRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGlDPAIATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSI 362
Cdd:cd17433 234 IYKPLIIGVSLMAFQQLTGINAVMFYAETIFEEAKFK-DSSVASVIVAAIQVLFTAVAALIMDRAGRKVLLVLSGVVMVF 312
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 363 GLAALGaffymqlvkgdissvvWMPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYP 442
Cdd:cd17433 313 STAAFG----------------WLAVGSMGFFIAGFAVGWGPIPWLVMSEIFPLHVRGVASGICVLTNWLMAFLVTKEFS 376
                       410       420       430       440
                ....*....|....*....|....*....|....*....|
gi 24644448 443 SL-DALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQ 481
Cdd:cd17433 377 SLmEVLSSYGTFWLFSAFCAFSVLFTLFCVPETKGKTLEQ 416
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
45-476 2.00e-65

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 217.90  E-value: 2.00e-65
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  45 AAVAANLSAFVVGTTLGWTSPIGPKLKS------EDTSDSPLSRPITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKW 118
Cdd:cd17357   1 AVIVAFGGSFQFGYNIGVVNAPQEVFKEfindtlVDRYGLNLSDSELDLLWSLIVSIFFIGGAIGSFISAFLANRFGRKN 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 119 VLLSSSLFFVLA---FGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAI 195
Cdd:cd17357  81 GLLISNALLVVSsllMFLSKSAKSPELLIFGRFLVGIACGLSTGFVPMYLQEISPSELRGALGSLTQIGVTLGILLGQVF 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 196 G-PYV-SYQALQWCCIVVPVVFDLVFYM----MPESP-YFFAGKGRKSEALKSLQFLRGQSAEgVHDEMAEIQANVEEAM 268
Cdd:cd17357 161 GlPSVlGTETLWPYLLFFPGIPALLQLAalpfFPESPkFLLISKGDEEEAEKSLKFLRGIEDD-VDQELEEIKKESEQMG 239
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 269 ASK-GTVMDLFKNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFASAN-TGLDPAIATIIIGCVQVGSSALTPLVADR 346
Cdd:cd17357 240 DQKqVSLMQLLRDPSLRLPLLLVLVVSASQQFSGINAIFFYSTFIFENAGfSPQLAEWANLGIGIVNVLSTIVGPFLIEK 319
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 347 LGRKVMLLTSSSVMSIGLAALGAFFYMQlvkGDISSVVWMPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVV 426
Cdd:cd17357 320 VGRRPLLLISLSVCAVALLLMSVFLFLS---EQNSWMSYGCIVAIFLFIFFFAIGLGPIPWFIGAELFPQAPRSAAQSLG 396
                       410       420       430       440       450
                ....*....|....*....|....*....|....*....|....*....|
gi 24644448 427 ASTCWTLGFLVTFFYPSLDALGSYYAFWLFAVCMVVAFFFVLFVVMETKG 476
Cdd:cd17357 397 SSVNWTSNFIVGMAFPPLQSIGGGFVFIIFAIPCALFLLYLYRYLPETKG 446
SP TIGR00879
MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of ...
42-482 3.75e-63

MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273317 [Multi-domain]  Cd Length: 481  Bit Score: 212.97  E-value: 3.75e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448    42 IFMAAVAANLSAF---VVGTTLGWtsPIGPKLKSEDTSDSPLSRpitsdEDAWISSLIAVGALVAPFVAGPMADRIGRKW 118
Cdd:TIGR00879  30 SLIAAIGGLMFGYdtgVIGGALAL--PAFEFKFTSANSDSYSSS-----LWGLVVSIFLVGGFIGALFAGWLSDRFGRKK 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   119 VLLSSSLFFVLAFGLNMVAS---EVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAI 195
Cdd:TIGR00879 103 SLLIIALLFVIGAILMGLAAfalSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGF 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   196 GPY--VSYQALQWC-----CIVVPVVFDLVFYMMPESPYFFAGKGRKSEALKSLQFLRGQSAE--GVHDEMAEIQANVEE 266
Cdd:TIGR00879 183 GSGkvSLNNTLGWRiplglQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEdkELLDELELIDIKRSI 262
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   267 AMASKGTVMDLFKNAGNR--RALFICAGLISFQQLSGINVVLFNSQSIFASAN-TGLDPAIATIIIGCVQVGSSALTPLV 343
Cdd:TIGR00879 263 EKRSVQPSWGSLFSSTRRirRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGvSTDHAFLVSIIVGAVNFAFTFVAIFL 342
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   344 ADRLGRKVMLLTSSSVMSIGLAALGAFFYMqLVKGDISSVVWMPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVAS 423
Cdd:TIGR00879 343 VDRFGRRPLLLIGAAGMAICLFVLGILGAS-FVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGI 421
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   424 SVVASTCWTLGFLVTFFYPS-LDALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQI 482
Cdd:TIGR00879 422 SIAVAANWLANFIVGFLFPTmLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLEEI 481
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
91-460 2.61e-56

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 192.01  E-value: 2.61e-56
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  91 WISSLIAVGALVAPFVAGPMADRIGRKWVLLSSS-LFFVLAFGLNMvASEVWILYMSRLIQGFGVGFVMTVQPMYVGEIS 169
Cdd:cd17359  40 LVVSSALLGAAIGALFAGRLADRFGRRKTLLISAvLFFISALGSAF-SPNFTIFIIARIIGGLAVGGASALVPMYIAEVA 118
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 170 TDNVRGATGSLMQLFIVGGILYVY----AIGPYVSYQALQ--------WCCIVVPVVFDLVFYMMPESPYFFAGKGRkse 237
Cdd:cd17359 119 PAEIRGRLVSLNQLMIVFGQLLAYivnyLIANAGGADWLGaegwrwmlGLEAIPAILFLLGMLFIPESPRWLVSKGK--- 195
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 238 alkslqflrgqsaegvhdemaeiqanveeamaskgtvmdlfknagnrRALFICAGLISFQQLSGINVVLFNSQSIFASAN 317
Cdd:cd17359 196 -----------------------------------------------PILIIGIGLAIFQQFVGINVIFYYGPEIFQNAG 228
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 318 TGLDPA-IATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMQLVKGDISsvvWMPVPALIIYNI 396
Cdd:cd17359 229 FSENAAlLQTIGIGVVNVIFTIIAILLVDKVGRKPLLLIGSIGMAISLLLIGTAFYFAPGSQASG---IVALVLILLFVA 305
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 24644448 397 VYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSL-DALGSYYAFWLFAVCM 460
Cdd:cd17359 306 FFAMSWGPVTWVLLSEIFPNRIRGLAMGIAVFFLWIANFLVSLTFPILlAAFGLAFTFLIFAVIC 370
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
91-459 1.76e-54

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 186.63  E-value: 1.76e-54
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  91 WISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEIST 170
Cdd:cd17315  38 LVVSSLLLGAAIGSLFGGPLADRFGRRKSLLIAAVLYVIGALLSALAPNVWVLIVGRFLLGLGVGLASVLVPLYISEIAP 117
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 171 DNVRGATGSLMQLFIVGGILYVYAIGPYVSYQALQW------CCIVVPVVFDLVFYMMPESpyffagkgrksealkslqf 244
Cdd:cd17315 118 AKIRGALGTLNQLMITFGILLAYLLGLALSLSPPGWwrlmfaLAAVPALLQLLLMFFLPES------------------- 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 245 lrgqsaegvhdemaeiqanveeamaskgtvmdlfknagnrRALFICAGLISFQQLSGINVVLFNSQSIFASANTGLDPAI 324
Cdd:cd17315 179 ----------------------------------------RALLVGVGLQLLQQLTGINAVMYYAPTIFKSAGGGTASIL 218
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 325 ATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMqlvKGDISSVVWMPVPALIIYNIVYCTGFGP 404
Cdd:cd17315 219 ASIIVGVVNLLATLVAIRLVDKVGRRPLLLIGFAGMAASLLLLAIAFLL---PALAKAAGWLALLGILLYIAAFAMGAGP 295
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 24644448 405 LPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPS-LDALGSYYAFWLFAVC 459
Cdd:cd17315 296 VPWLLLSEIFPLRIRGKGMAIATLVNWIFNFIVGLTFLImVSTIGLAGVFIFFAAV 351
MFS_GLUT_Class2 cd17432
Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called ...
92-482 3.80e-50

Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT5, also called Solute carrier family 2, facilitated glucose transporter member 5 (SLC2A5), is a well-established fructose transporter found in the small intestine. GLUT7 (or SLC2A7) is a high-affinity glucose and fructose transporter expressed in the small intestine and colon. GLUT9 (or SLC2A9) transports urate and fructose, and is most strongly expressed in the basolateral membranes of proximal renal tubular cells, liver and placenta. It may play a role in urate reabsorption by proximal tubules. GLUT11 (or SLC2A11) is a facilitative glucose transporter expressed in heart and skeletal muscle. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340990 [Multi-domain]  Cd Length: 452  Bit Score: 177.42  E-value: 3.80e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  92 ISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLA---FGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEI 168
Cdd:cd17432  55 TVSIFPLGGLFGSLLVGPLVIRLGRKGTLLLNNIFAIVAailMGLSKIAKSFEMIIVGRFLVGINAGISLNVVPMYLGES 134
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 169 STDNVRGATGSLMQLFIVGGILYVYAIG-PYVSYQALQW----CCIVVPVVFDLVFY-MMPESP-YFFAGKGRKSEALKS 241
Cdd:cd17432 135 APKNLRGAVGLVPAIFITLGILLGQVLGlRELLGNEEGWplllALTGVPALLQLLTLpFFPESPrYLLIEKGDEEAARKA 214
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 242 LQFLRGQsaEGVHDEMAEIQanvEEAMASKGT----VMDLFKNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFASAn 317
Cdd:cd17432 215 LQRLRGK--EDVDDEMEEML---EEQRAEKGVgtvsVLELFRDRSVRWQLISIIVLMAGQQLCGINAIYFYADSIFLEA- 288
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 318 tGLDPAI---ATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMQlvkgdiSSVVWMP---VPAL 391
Cdd:cd17432 289 -GIPEDKiqyVTVGTGACEVLATITCVLVIERLGRRPLLIGGFGLMAVWCAVLTVALSLQ------NTVSWMPylsIVCI 361
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 392 IIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSLDALGSYYAFWLFAVCMVVAFFFVLFVV 471
Cdd:cd17432 362 FAYIASFGIGPAGVPFILTTEIFDQSSRPAAFMVAGSLNWLSNFLVGLLFPFIQEGLGAYCFLVFAVICLLTAIYIFFVL 441
                       410
                ....*....|.
gi 24644448 472 METKGLSLQQI 482
Cdd:cd17432 442 PETKGKTFLEI 452
MFS_GLUT6_Class3 cd17434
Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
43-481 6.95e-50

Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 6 (GLUT6) is also called Solute carrier family 2, facilitated glucose transporter member 6 (SLC2A6). It is classified as a Class 3 GLUT protein, and is a facilitative glucose transporter that binds cytochalasin B with low affinity. It is found in the brain, spleen, and leucocytes. GLUT6 may function in oxalate secretion. SLC2A6 has been identified as an oxalate nephrolithiasis gene in mice; its deletion causes spontaneous calcium oxalate nephrolithiasis in the setting of hyperoxalaemia, hyperoxaluria, and nephrocalcinosis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340992 [Multi-domain]  Cd Length: 417  Bit Score: 175.79  E-value: 6.95e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  43 FMAAVAANLSAFVVGTTLGWTSPIGPKLKSEDTSDSPLSRpitsDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLS 122
Cdd:cd17434   1 FLAVFSAVLGNFSFGYALVYTSPVIPALEQGDDPRLHLNV----HQISWFGSVFTLGAAAGGLSAMFLNDRLGRKLSIMF 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 123 SSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYVSYQ 202
Cdd:cd17434  77 SAVPSALGYLLMGSAQGIWMLLLGRFLTGFAGGITAASIPVYVSEISHPGVRGALGACPQIMAVFGSLALYALGLLLPWR 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 203 ALQWCCIVVPVVFDLVFYMMPESPYFFAGKGRKSEALKSLQFLRGQSAEgVHDEMAEIQANVEEaMASKGTVMDLfKNAG 282
Cdd:cd17434 157 WLAVAGEVPVVIMILLLCFMPNSPRFLISKGKDEKALKALAWLRGPNTD-YMTEFEQIKDNIRK-QSSRLSWAEL-KTPS 233
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 283 NRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGLDPAIATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSI 362
Cdd:cd17434 234 YYKPILIAVVMRFLQQLTGITPILVYLEPIFHLTAVILEPKYDAALVGAVRLLSVAIAASLMDKAGRKILLFTSAFLMFA 313
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 363 GLAALGAffymqlvkgdissvvwMPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVT-FFY 441
Cdd:cd17434 314 ANLSMGL----------------IPLIAAMLFIMGYAMGWGPITWLLMSEILPLKARGVASGLCVVVSWITAFVLTqLFL 377
                       410       420       430       440
                ....*....|....*....|....*....|....*....|
gi 24644448 442 PSLDALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQ 481
Cdd:cd17434 378 PVVVTFGLQVPFLFFAAVCAVSIIFTACCVPETKGRTLEQ 417
MFS_GLUT_Class1 cd17431
Class 1 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called ...
94-476 9.55e-49

Class 1 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-4 are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT1, also called solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1), displays broad substrate specificity and can transport a wide range of pentoses and hexoses including glucose, galactose, mannose, and glucosamine. It is found in the brain, erythrocytes, and in many fetal tissues. GLUT2 (or SLC2A2) is found in the liver, islet of Langerhans, intestine, and kidney, and is the isoform that likely mediates the bidirectional transfer of glucose across the plasma membrane of hepatocytes and is responsible for uptake of glucose by beta cells. GLUT3 (or SLC2A3) is found in the brain and can mediates the uptake of glucose, 2-deoxyglucose, galactose, mannose, xylose and fucose, and dehydroascorbate. GLUT4 (or SLC2A4) is an insulin-regulated facilitative glucose transporter found in adipose tissues, and in skeletal and cardiac muscle. GLUT14 (or SLC2A14) is an orphan transporter expressed mainly in the testis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340989 [Multi-domain]  Cd Length: 445  Bit Score: 173.68  E-value: 9.55e-49
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  94 SLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLA---FGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEIST 170
Cdd:cd17431  57 AIFSVGGMIGSFSVGLFVNRFGRRNSMLYNNLLAFAGaalMGLSKLAKSYEMLILGRFIIGLYCGLTTGLVPMYIGEISP 136
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 171 DNVRGATGSLMQLFIVGGILYVYAIG-PYVSYQALQW----CCIVVPVVFDLVFYMM-PESP-YFFAGKGRKSEALKSLQ 243
Cdd:cd17431 137 TALRGALGTLHQLGIVVGILISQIFGlEFILGTEELWplllGFTIVPAILQLALLPFcPESPrYLLINRNEEEEAKSVLK 216
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 244 FLRGQsaEGVHDEMAEIQANVEEAMA-SKGTVMDLFKNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFASAnTGLDP 322
Cdd:cd17431 217 KLRGT--TDVSEDIQEMKEESRQMMReKKVTILELFRSSSYRQPIIIAIVLQLSQQLSGINAVFYYSTSIFEKA-GVQQP 293
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 323 AIATIIIGCVQVGSSALTPLVADRLGRKVMLLT-------SSSVMSIGLAALGAFFYMQLVkgdisSVVwmpvpALIIYN 395
Cdd:cd17431 294 VYATIGAGVVNTIFTVVSLFLVERAGRRTLHLIglggmaiCAILMTIALLLLEGYPWMSYV-----SIV-----AIFGFV 363
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 396 IVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSLDALGSYYAFWLFAVCMVVAFFFVLFVVMETK 475
Cdd:cd17431 364 AFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTSNFIVGMCFQYIANLCGPYVFIIFTVFLLTFFIFTYFKVPETK 443

                .
gi 24644448 476 G 476
Cdd:cd17431 444 G 444
MFS_GLUT10_12_Class3_like cd17362
Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the ...
99-482 8.98e-47

Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 10, GLUT12, plant polyol transporters (PLTs), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340920 [Multi-domain]  Cd Length: 389  Bit Score: 166.76  E-value: 8.98e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  99 GALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATG 178
Cdd:cd17362  51 GALLGSLVAGALIDRLGRRKELILAALLYLVGSLVTGLAPSYPVLLVGRLIYGVGIGLAMHAAPVYIAETSPSHIRGLLV 130
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 179 SLMQLFIVGGILYVYAIGPYVSYQALQW-----CCIVVPVVFDLVFYMMPESPYFfagkgrksealkslqflrgqsaegv 253
Cdd:cd17362 131 SLKELFIVLGILLGYVSGYAFADVVGGWrymygLAAPPALLLGIGMWFLPPSPRW------------------------- 185
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 254 hdemaeiqanveeamaskgtvmdlfkNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFASA--NTGLDPAIATIIIGC 331
Cdd:cd17362 186 --------------------------QGNYRKPLIIGLGLVLFQQITGQPSVLYYAATIFKSAgfSAASDATLVSVGLGV 239
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 332 VQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMqlVKGDISSVVWMPVPALIIYNIVYCTGFGPLPWAVLG 411
Cdd:cd17362 240 FKLLMTIVAVLLVDKLGRRPLLLGGVSGMVVSLFLLAAYNLF--VQMGPAGLAWLSLVALLLYVGAYQISFGPISWLMVS 317
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 24644448 412 EMFPANIKSVASSVVASTCWTLGFLVTFFYPSL-DALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQI 482
Cdd:cd17362 318 EIFPLRVRGRAIALAVLVNFGSNALVSLAFLPLqELIGLPGTFLGFGVIGVLALLFIYFTVPETKGLSLEEI 389
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
77-457 1.52e-43

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 157.43  E-value: 1.52e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  77 DSPLSRPITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGF 156
Cdd:cd17360  25 DDLGEVVLSTGWQELIVSSTVAGAAVGAAIGGWLNDRFGRRPCILLADALFTIGAIVMAAAPNKEVLIVGRVLVGLGVGI 104
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 157 VMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYVSYQALQWCCIV----VPVVFDLV-FYMMPESPYFFAg 231
Cdd:cd17360 105 ASMTVPLYIAEAAPPRIRGRLVTINVLFITGGQFVAYVINGAFSYLPGGWRWMLglaaVPAVLQFIgLLFLPESPRWPS- 183
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 232 kgrksealkslqflrgqsaegvhdemaeiqanveeamaskgtvmdlfknagNRRALFICAGLISFQQLSGINVVLFNSQS 311
Cdd:cd17360 184 ---------------------------------------------------TRRALIVGCGLQAFQQFSGINTVMYYSAT 212
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 312 IFASAntGLDPAIATIIIGCVQVGSSALTPLVA----DRLGRKVMLLTSSSVMSIGLAALGaffymqlvkgdissvVWMP 387
Cdd:cd17360 213 ILQMA--GFKDNQNAIWLSLIVAGTNFIFTIVGmyliDKFGRRKLLLISLFGVIVALVVLA---------------VWLA 275
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 24644448 388 VPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSL-DALGSYYAFWLFA 457
Cdd:cd17360 276 LVGLILYLAFFAPGMGPVPWTVNSEIYPLWARGTGGGCAAAVNWVFNLLVSQTFLTLtQAIGPYGTFLLFA 346
MFS_HXT cd17356
Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and ...
92-484 1.27e-40

Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and similar proteins; The fungal hexose transporter (HXT) subfamily is comprised of functionally redundant proteins that function mainly in the transport of glucose, as well as other sugars such as galactose and fructose. Saccharomyces cerevisiae has 20 genes that encode proteins in this family (HXT1 to HXT17, GAL2, SNF3, and RGT2). Seven of these (HXT1-7) encode functional glucose transporters. Gal2p is a galactose transporter, while Rgt2p and Snf3p act as cell surface glucose receptors that initiate signal transduction in response to glucose, functioning in an induction pathway responsible for glucose uptake. Rgt2p is activated by high levels of glucose and stimulates expression of low affinity glucose transporters such as Hxt1p and Hxt3p, while Snf3p generates a glucose signal in response to low levels of glucose, stimulating the expression of high affinity glucose transporters such as Hxt2p and Hxt4p. Schizosaccharomyces pombe contains eight GHT genes (GHT1-8) belonging to this family. Ght1, Ght2, and Ght5 are high-affinity glucose transporters; Ght3 is a high-affinity gluconate transporter; and Ght6 high-affinity fructose transporter. The substrate specificities for Ght4, Ght7, and Ght8 remain undetermined. The HXT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340914 [Multi-domain]  Cd Length: 403  Bit Score: 150.48  E-value: 1.27e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  92 ISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYM-SRLIQGFGVGFVMTVQPMYVGEIST 170
Cdd:cd17356  50 IVSIVNLGSFFGALISSFLSDRIGRKKSIQIGCVIYIIGAIIQVAAIGKWYQLIvGRIIAGLGVGFASVLVPVYQSEVAP 129
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 171 DNVRGATGSLMQLFIVGGILYVYAI-------GPYVSYQALQWCCIVVPVVFDLVFYMMPESPYFFagkgrksealkslq 243
Cdd:cd17356 130 KHIRGTLVSLYQLAITIGILVAYCInygthklDGSAQWRIPLGLQIVWGLLLLIGMFFLPESPRWL-------------- 195
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 244 flrgqsaegvhdemaeiqanveeamaskgtvmdlfknagnrRALFICAGLISFQQLSGINVVLFNSQSIFASAN-TGLDP 322
Cdd:cd17356 196 -----------------------------------------YRTILGIMLQLFQQLTGINYFFYYGTTIFQSTGlTGSSP 234
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 323 AIATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSI---GLAALGAFF---YMQLVKGDISSVVWMPVpALIIYNI 396
Cdd:cd17356 235 LLTSIILYIVNFVSTIPGLFFVDKFGRRTCLLIGAAGMSIclfIYAAVGVRYlipNPQSGTSNKSAGNGMIV-FICLFIF 313
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 397 VYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSLDALGSYYAFWLFAVCMVVAFFFVLFVVMETKG 476
Cdd:cd17356 314 SFATTWGPIAWVYVAEVFPLRVRSKGMALATAFNWLWNFLISFFTPFIIGSIGFKYYYIFAGCNLLAFIVVFFFVPETKG 393

                ....*...
gi 24644448 477 LSLQQIQD 484
Cdd:cd17356 394 LTLEEIDE 401
xylE PRK10077
D-xylose transporter XylE; Provisional
93-483 1.18e-34

D-xylose transporter XylE; Provisional


Pssm-ID: 182225 [Multi-domain]  Cd Length: 479  Bit Score: 135.59  E-value: 1.18e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   93 SSLIavGALVAPFVAGPMADRIGRKWVL-LSSSLFFVLAFGL-------------NMVASEVWILYmsRLIQGFGVGFVM 158
Cdd:PRK10077  63 SALI--GCIIGGALGGYCSNRFGRRDSLkIAAVLFFISALGSawpefgftsigpdNTGYVPEFVIY--RIIGGIGVGLAS 138
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  159 TVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYVSYQ-ALQWCC-----------IVVPVVFDLVFYMMPESP 226
Cdd:PRK10077 139 MLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSgDASWLNtdgwrymfaseAIPALLFLMLLYFVPETP 218
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  227 YFFAGKGRKSEALKSLQFLRGQSAEGvhDEMAEIQANVEEAMASKGTvmdLFKNAgnrrALFICAG--LISFQQLSGINV 304
Cdd:PRK10077 219 RYLMSRGKQEQAEGILRKIMGNTLAT--QALQEIKHSLDHGRKTGGK---LLMFG----VGVIVIGvmLSVFQQFVGINV 289
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  305 VLFNSQSIFASANTGLDPA-IATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMQLvKGDIssv 383
Cdd:PRK10077 290 VLYYAPEIFKTLGASTDIAlLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQA-PGIV--- 365
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  384 vwmPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSLDALGSY-------YAFWLF 456
Cdd:PRK10077 366 ---ALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLvahfhngFSYWIY 442
                        410       420
                 ....*....|....*....|....*..
gi 24644448  457 AVCMVVAFFFVLFVVMETKGLSLQQIQ 483
Cdd:PRK10077 443 GCMGVLAALFMWKFVPETKGKTLEEME 469
MFS_STP cd17361
Plant Sugar transport protein subfamily of the Major Facilitator Superfamily of transporters; ...
93-460 1.01e-32

Plant Sugar transport protein subfamily of the Major Facilitator Superfamily of transporters; The plant Sugar transport protein (STP) subfamily includes STP1-STP14; they are also called hexose transporters. They mediate the active uptake of hexoses such as glucose, 3-O-methylglucose, fructose, xylose, mannose, galactose, fucose, 2-deoxyglucose and arabinose, by sugar/hydrogen symport. Several STP family transporters are expressed in a tissue-specific manner, or at specific developmental stages. STP1 is the member with the highest expression level of all members and high expression is detected in photosynthetic tissues, such as leaves and stems, while roots, siliques, and flowers show lower expression levels. It plays a major role in the uptake and response of Arabidopsis seeds and seedlings to sugars. The STP subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340919 [Multi-domain]  Cd Length: 390  Bit Score: 128.52  E-value: 1.01e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  93 SSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDN 172
Cdd:cd17361  57 TSSLYLAGLVASLLASYVTRKWGRKPSMLIGGVLFLVGAALNAAAQNIAMLIVGRILLGFGVGFGNQAVPLYLSEMAPAK 136
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 173 VRGATGSLMQLFIVGGILYVYAIGpYVSYQALQW------CCIVVPVVFDLVF-YMMPESPyffagkgrksealkslqfl 245
Cdd:cd17361 137 LRGALNIGFQLAITIGILIANLIN-YGTSKIKPNgwrlslGLAAVPALILLLGsLFLPETP------------------- 196
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 246 rgqsaegvhdemaeiqanveeamaskgtvmdlfknagNRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGLDPA-I 324
Cdd:cd17361 197 -------------------------------------NSPQLVIAILIPFFQQLTGINVIMFYAPVLFQTLGFGSDASlI 239
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 325 ATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMQLVKGDI--SSVVWMPVPALIIYNIVYCTGF 402
Cdd:cd17361 240 SAVITGAVNVVSTLVSIYLVDRFGRRFLLLEGGVQMLASQVAIGILLAVKFGDGGElpKAYAIAVVVLICLYVAAFAWSW 319
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 24644448 403 GPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVT-FFYPSLDAL--GSYYAFWLFAVCM 460
Cdd:cd17361 320 GPLGWLVPSEIFPLETRSAGQSLTVAVNFLFTFVIAqAFLSMLCAMkfGIFLFFAGWVVVM 380
MFS_PLT cd17437
Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The ...
100-482 3.05e-28

Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The plant Polyol transporter (PLT) subfamily includes PLT1-6 from Arabidopsis thaliana and similar transporters. The best characterized member of the group is Polyol transporter 5, also called Sugar-proton symporter PLT5, which mediates the H+-symport of numerous substrates including linear polyols (such as sorbitol, xylitol, erythritol or glycerol), cyclic polyol myo-inositol, and different hexoses, pentoses (including ribose), tetroses, and sugar alcohols. It functions to transport a wide range of substrates into specific sink tissues in the plant. The PLT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340995 [Multi-domain]  Cd Length: 387  Bit Score: 115.58  E-value: 3.05e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 100 ALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGS 179
Cdd:cd17437  45 SLVGSLAAGRTSDWIGRRYTIALAALIFFVGALLMGVAPNYPVLMVGRFVAGIGVGFALMIAPVYTAEVAPASSRGFLTS 124
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 180 LMQLFIVGGIL------YVYAIGP-YVSYQALQWCCIVVPVVFDLVFYMMPESPyffagkgRKSEALkslqflrgqsaeg 252
Cdd:cd17437 125 FPEIFINIGILlgyvsnYAFSGLPlHVGWRLMLGVGAVPSLFLAIGVLAMPESP-------RWTPAV------------- 184
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 253 vhdemaeiqanveeamaskgtvmdlfknagnRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGLDPAI--ATIIIG 330
Cdd:cd17437 185 -------------------------------RRMLIAALGIHFFQQASGIDAVVLYSPRIFKKAGIKSKDKLllATVAVG 233
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 331 CVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALG-AFFYMQLVKGDISSVVWMPVPALIIYNIVYCTGFGPLPWAV 409
Cdd:cd17437 234 VTKTLFILVATFLLDKVGRRPLLLTSTGGMTLSLTALAtSLTFIDRNGGGLTWALVLAITAVCSFVAFFSIGAGPITWVY 313
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 24644448 410 LGEMFPANIKSVASSV-VASTCWTLGFLVTFFYPSLDALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQI 482
Cdd:cd17437 314 SSEIFPLRLRAQGASLgVVVNRLMSGTVSMTFLSMSKAITTGGTFFLFAGVAAAAWVFFYFFLPETKGKSLEEI 387
MFS_GLUT12_Class3 cd17435
Glucose transporter type 12 (GLUT12), a Class 3 GLUT, of the Major Facilitator Superfamily of ...
44-482 3.08e-26

Glucose transporter type 12 (GLUT12), a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 12 (GLUT12) is also called Solute carrier family 2, facilitated glucose transporter member 12 (SLC2A12). It is a facilitative glucose transporter, classified as a Class 3 GLUT, and is expressed in the heart, skeletal muscle, prostate, and small intestine, and is highly upregulated in breast ductal cell carcinoma. It plays a role as a secondary insulin-sensitive glucose transporter in insulin-dependent tissues. The GLUT12 subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340993 [Multi-domain]  Cd Length: 376  Bit Score: 109.89  E-value: 3.08e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  44 MAAVAANLSAFVVGTTLGWTSPIGPKLKSEDTsdsplsrpITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSS 123
Cdd:cd17435   1 LSSVTAAVSGLLVGYELGIISGALLQLRTLLA--------LSCHEQEMVVSSLLIGALLASLTGGVLIDRYGRRTAIILT 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 124 SLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYVSYQA 203
Cdd:cd17435  73 SCLLVLGSLLLVCSVSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILLAYISNYAFANVS 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 204 LQW-----CCIVVPVVFDLVFYMMPESPYFFAGKgrksealkslqflrgqsaegvhDEMaeiqanveeamaskgtvmdlf 278
Cdd:cd17435 153 NGWkymfgLVIPLAALQAIAMYFLPPSPRFLVMK----------------------DNM--------------------- 189
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 279 knagnRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGLDPA--IATIIIGCVQVGSSALTPLVADRLGRKVMLLTS 356
Cdd:cd17435 190 -----RARLLIGLTLVFFVQITGQPNILFYASTVLKSVGFQSNEAasLASTGVGVVKVVSTIPAIFLVDKVGSKTFLCIG 264
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 357 SSVMSIGLAALGAffymqlvkgdissvvWMPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFL 436
Cdd:cd17435 265 SSVMAVSLVTMGL---------------WLSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGINLL 329
                       410       420       430       440
                ....*....|....*....|....*....|....*....|....*..
gi 24644448 437 VTFFYPSL-DALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQI 482
Cdd:cd17435 330 ISLTFLTVtELIGLPWVCFIYTAMSLASLVFVIMFVPETKGCSLEQI 376
MFS_GLUT10_Class3 cd17436
Glucose transporter type 10 (GLUT10), a Class 3 GLUT, of the Major Facilitator Superfamily of ...
87-482 1.69e-22

Glucose transporter type 10 (GLUT10), a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 10 (GLUT10) is also called Solute carrier family 2, facilitated glucose transporter member 10 (SLC2A10). It is classified as a Class 3 GLUT and is a facilitative glucose transporter that exhibits a wide tissue distribution. It is expressed in pancreas, placenta, heart, lung, liver, brain, fat, muscle, and kidney. GLUT10 facilitates the transport of dehydroascorbic acid (DHA), the oxidized form of vitamin C, into mitochondria, and also increases cellular uptake of DHA, which in turn protects cells against oxidative stress. Loss-of-function mutations in SLC2A10 cause arterial tortuosity syndrome (ATS), an autosomal recessive connective tissue disorder characterized by twisting and lengthening of the major arteries, hypermobility of the joints, and laxity of skin. The GLUT10 subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340994 [Multi-domain]  Cd Length: 376  Bit Score: 99.11  E-value: 1.69e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  87 DEDAWISSLIaVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIqgfgVGFVMTVQPM--- 163
Cdd:cd17436  37 EQEALVSALL-IGALLASLIGGFLIDRHGRRTSILGSNLVLLAGSLILTLAGSFFWLVIGRAV----VGFAISVSSMacc 111
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 164 -YVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYVSYQALQWccivvpvvfdlvfymmpesPYFFaGKGRKSEALKSL 242
Cdd:cd17436 112 iYVSEMVTPHQRGLLVSLYEAGITVGILISYALNYFFSNVLTGW-------------------RYMF-GLAIIPAAIQFA 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 243 QFLrgqsaegvhdemaeiqanveeaMASKGTVMDLFKNAGNRRALfICAGLISFQQLSGINVVLFNSQSIFASA--NTGL 320
Cdd:cd17436 172 SIL----------------------LLPKKPEVLNIKDNMRRRTL-VGLGLVLFQQFTGQPNVLCYASTIFRSVgfQSNS 228
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 321 DPAIATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALGaffymqlvkgdissvVWMPVPALIIYNIVYCT 400
Cdd:cd17436 229 SAVLASVGLGVVKVIATLLAMLFADRAGRRSLLIAGCSVMAVSVSGIG---------------LWITLLCLMAFVSAFSI 293
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 401 GFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTF-FYPSLDALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSL 479
Cdd:cd17436 294 GFGPMTWLVLSEIYPADIRGRAFSFCNSFNWAANLLITLsFLDLIDVIGLSWTFLLYGVVGVAGVVFIYLFVPETKGQSL 373

                ...
gi 24644448 480 QQI 482
Cdd:cd17436 374 EEI 376
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
36-428 9.25e-20

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 90.42  E-value: 9.25e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  36 PVKSGRIFMAAVAANLSAFVVGTTLGWTSPIGPKLKSEDTsdsplsrpITSDEDAWISSLIAVGALVAPFVAGPMADRIG 115
Cdd:COG2814   2 PATPRRRWLALLALALGAFLSGLGIGIVLPALPLIAADLG--------ASPAQAGLVVTAYLLGAALGAPLAGRLADRFG 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 116 RKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGI----LY 191
Cdd:COG2814  74 RRRVLLLGLLLFALGSLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPalgpLL 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 192 VYAIGPYVSYQALQWCCIVVPVV-FDLVFYMMPESPyffagkgrksealkslqflrgqsaegvhdemaeiqanVEEAMAS 270
Cdd:COG2814 154 GGLLADLFGWRWVFLVNAVLALLaLLLLLRLLPESR-------------------------------------PAARARL 196
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 271 KGTVMDLFKNAGNRRALFICAGlisfqqLSGINVVLFNSQSIFASANTGLDPAIATIIIGCVQVGSSALTPLV---ADRL 347
Cdd:COG2814 197 RGSLRELLRRPRLLLLLLLAFL------LGFGFFALFTYLPLYLQEVLGLSASAAGLLLALFGLGGVLGALLAgrlADRF 270
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 348 GRKVMLLTSSSVMSIGLAALGaffymqlvkgdISSVVWMPVPALIIYNIVYcTGFGPLPWAVLGEMFPANIKSVASSVVA 427
Cdd:COG2814 271 GRRRLLLIGLLLLALGLLLLA-----------LAGSLWLLLLALFLLGFGF-GLLFPLLQALVAELAPPEARGRASGLYN 338

                .
gi 24644448 428 S 428
Cdd:COG2814 339 S 339
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
90-460 1.16e-17

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 84.40  E-value: 1.16e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  90 AWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEIS 169
Cdd:cd06174  34 GLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFAPSFWLLLLGRFLLGLGSGLIDPAVLALIADLF 113
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 170 TDNVRGATGSLMQLFIVGGILYVYAIGPYV------SYQALQWCCIVVPVVFDLVFYMMPESPYFfagkgrksealkslq 243
Cdd:cd06174 114 PERERGRALGLLQAFGSVGGILGPLLGGILasslgfGWRAVFLIAAALALLAAILLLLVVPDPPE--------------- 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 244 flrgqsaegvhdemaeiQANVEEAMASKGTVMDLFKNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFASAN-TGLDP 322
Cdd:cd06174 179 -----------------SARAKNEEASSKSVLKLLKRVLKNPGLWLLLLAIFLVNLAYYSFSTLLPLFLLDLGGlSVAVA 241
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 323 AIATIIIGCVQVGSSALTPLVADR-LGRKVMLLTSSSVMSIGLAALGAFFYMQLvkgdissvvwmpVPALIIYNIVYCTG 401
Cdd:cd06174 242 GLLLSLFGLAGALGSLLLGLLSDRlIGRKPLLLIGLLLMALGLALLLLAPSLLL------------LLLLLLLLGFGLGG 309
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 24644448 402 FGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSL--DALGSYYAFWLFAVCM 460
Cdd:cd06174 310 LLPLSFALIAELFPPEIRGTAFGLLNTFGFLGGAIGPLLAGFLlaATFGLTGAFLVLAVLL 370
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
91-458 8.71e-16

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 78.77  E-value: 8.71e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  91 WISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEIST 170
Cdd:cd17325  35 LIVAAYALAQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAFATSYWQLLLARFLQGLASAAVWPAAMALIADIAP 114
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 171 DNVRGATGSLMQLFIVGGILyvyaIGPYV--------SYQALQWCCIVVPVV-FDLVFYMMPESPyffagkgrksealks 241
Cdd:cd17325 115 PEERGRAMGIFSSAIGLGFL----IGPLLgglladalGYRAPFLVCAALALLaLVLALLLLPEPR--------------- 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 242 lqflrgqsaegvhdemaeiqANVEEAMASKGTVMDLFKNAGNRRALFICAGLISFQQL--SGINVVLfnsqSIFASANTG 319
Cdd:cd17325 176 --------------------PPPNKRAVSAARLRSGLRLLLRDRRLLALFLAIFVLAFafGALEPFL----PLYAAELGG 231
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 320 LDPAIATIIIGCVQVGSSALTPLV---ADRLGRKVMLLTSSSVMSIGLAALGaffymqlvkgdISSVVWMPVPALIIYNI 396
Cdd:cd17325 232 LSPAQIGLLFGAQGLASALSQPPAgklSDRIGRKPLILIGLLLSAVALLLLP-----------LATSFWLLLLLLALLGL 300
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 24644448 397 VYCTGFGPLPwAVLGEMFPANIKSVASSvVASTCWTLGF-----LVTFFYpslDALGSYYAFWLFAV 458
Cdd:cd17325 301 GLGLVFPATL-ALLADIVPPEGRGTAMG-LFNTAFSLGMvlgplLGGFLY---DAFGFATPFLAAAA 362
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
90-460 1.14e-13

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 72.25  E-value: 1.14e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  90 AWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEIS 169
Cdd:cd17316  39 GLLFAAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLATLLIGLLPTPILLLVLRFLQGIGIGGEYPGASTYVAEFA 118
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 170 TDNVRGATGSLMQLFIVGGILYVYAIGPYVSYQALQW----CCIVVPVVFDLVFYMMpespyffagkgrksealkslqfl 245
Cdd:cd17316 119 PSKRRGFALGLLQSGWALGALLAALVASLLIPLLSGDwgwrILFLIGALPALLALLL----------------------- 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 246 rgqsaegvhdemaeiqanveeamaskgtvmdlfknagnRRALFICAGLISFQqlSGINVVLFNSQSIFASANTGLDPAIA 325
Cdd:cd17316 176 --------------------------------------RRRTLLLILLWFFI--SFGYYGLTTFLPTYLQTVLGLSPATS 215
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 326 ---TIIIGCVQVGSSALTPLVADRLGRKVMLltsssVMSIGLAALGAFFYMQLVKGDissvVWMPVPALIIYNIVYCTGF 402
Cdd:cd17316 216 slyLLLISLGALVGALIAGLLSDRIGRKKTL-----VIGLILSGILALPLFYLLSGS----PTLLLLLLFILSFFVGGVW 286
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 403 GPLPwAVLGEMFPANIKSVASSVVASTCwTLGFLVTFFY--PSLDALGSYYAFWLFAVCM 460
Cdd:cd17316 287 GALY-AYLAELFPTEVRATGVGLSYNLG-RLGGGGAPPLiaLLLASTGGTGVPALILALL 344
MFS_1 pfam07690
Major Facilitator Superfamily;
51-437 1.97e-13

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 71.30  E-value: 1.97e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448    51 LSAFVVGTTLGWTSPIGPKLKSEDTSdsplsrpITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLA 130
Cdd:pfam07690   3 LAAFLAALGRSLLGPALPLLLAEDLG-------ISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALG 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   131 FGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYV----SYQALQW 206
Cdd:pfam07690  76 LLLLLFASSLWLLLVLRVLQGLGAGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLaslfGWRAAFL 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   207 CCIVVPVVFDLVFYMMPESPyffagkgrksealkslqflrgqsaegvhdemaEIQANVEEAMASKGTVMDLFKNAGNRRA 286
Cdd:pfam07690 156 ILAILSLLAAVLLLLPRPPP--------------------------------ESKRPKPAEEARLSLIVAWKALLRDPVL 203
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   287 LFICAGLISFQQLSGINVVLFNSQSIFasantGLDPAIATIIIGCVQVGSSALTPLV---ADRLGRKVMLLtsssvMSIG 363
Cdd:pfam07690 204 WLLLALLLFGFAFFGLLTYLPLYQEVL-----GLSALLAGLLLGLGGLLGAIGRLLLgrlSDRLGRRRRLL-----LALL 273
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 24644448   364 LAALGAFFYMQLVKGDISSVVWMpvpALIIYNIVYCTGFGPLpWAVLGEMFPANIKSVASSvVASTCWTLGFLV 437
Cdd:pfam07690 274 LLILAALGLLLLSLTLSSLWLLL---ALLLLGFGFGLVFPAL-NALVSDLAPKEERGTASG-LYNTAGSLGGAL 342
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
88-458 3.66e-13

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 71.59  E-value: 3.66e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448    88 EDAWI----SSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLfFVLAFGLNMVASEVWILYMS-RLIQGFGV-GFVMTVQ 161
Cdd:TIGR00898 124 EDAWKvdltQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTL-VTAVSGVLTAFSPNYTVFLVfRLLVGMGIgGIWVQAV 202
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   162 PMYVgEISTDNVRGATGSLMQLFIVGGILyvyaIGPYVSYQALQW----CCIVVP-VVFDLVFYMMPESPYFFAGKGRKS 236
Cdd:TIGR00898 203 VLNT-EFLPKKQRAIVGTLIQVFFSLGLV----LLPLVAYFIPDWrwlqLAVSLPtFLFFLLSWFVPESPRWLISQGRIE 277
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   237 EALKSLQflRGQSAEGVHDEMAEIQANVEEAMASK---GTVMDLFKNAgNRRALFICAGLISFqqlsGINVVLFNsqSIF 313
Cdd:TIGR00898 278 EALKILQ--RIAKINGKKLPAEVLSLSLEKDLSSSkkqYSFLDLFRTP-NLRKTTLCLMMLWF----TTAFSYYG--LVL 348
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   314 ASANTGLDPAIATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIglaalgAFFYMQLVKGDISSVvwmpVPALII 393
Cdd:TIGR00898 349 DLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGV------ALLLLLFVPVDLYFL----RTALAV 418
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 24644448   394 YNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCwTLGFLVTffyPSLDALGSYYAFWLFAV 458
Cdd:TIGR00898 419 LGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMA-RVGSIIS---PFLVYLGEKWLFLPLVL 479
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
90-231 3.80e-13

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 69.84  E-value: 3.80e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  90 AWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEIS 169
Cdd:COG0477  52 GWIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLLFGLASLLCGLAPSPELLIAARALQGIGAGGLMPGALALIAELF 131
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 24644448 170 TDNVRGATGSLMQLFIVGGILYVYAIG----PYVSYQALQWCCIVVPVVFDLVFYMMPESPYFFAG 231
Cdd:COG0477 132 PARERGRALGLWGAAIGLGLALGPLLGgllvAALGWRWIFLINAPLGLLALVLRLRLPESRGLLLA 197
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
41-460 9.31e-13

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 69.52  E-value: 9.31e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  41 RIFMAAVAANLSAFVVGTTLgwtSPIGPKLKSEdtsdsplsRPITSDEDAWISSL-IAVGALVAPFvAGPMADRIGRKWV 119
Cdd:COG2223   5 RVLLLATLAFFLAFGVWYLW---SVLAPPLAEE--------FGLSAAQLGLLFAIpVLVGALLRIP-LGFLVDRFGPRRV 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 120 LLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRG-ATGSLMQLFIVGGILYVYAIGPY 198
Cdd:COG2223  73 LLIGLLLLGIGLLLLALAVSYWLLLLLGLLLGIGGGGSFAVGIALVSKWFPPDRRGlALGLAAGGGNLGAAVAAFLAPLL 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 199 VSYQALQW----CCIVVPVVFDLVFYMMPESPYFfagkgrksealkslqflrgqsaegvhdemaeiqanveEAMASKGTV 274
Cdd:COG2223 153 IAAFGWRNafliLGILLLVVAVLAWLFLRDPPAG-------------------------------------AAAAAKASL 195
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 275 MDLFKNAGNRRALFICAG-LISFQQLSGINVVLfnsqSIFASANTGLDPAIATIIIGCVQVGSSALTPL---VADRLGRK 350
Cdd:COG2223 196 RDQLEALRDPRFWLLSLLyFGTFGSFIGFSSWL----PPYLVDQFGLSAATAGLLAALFALLGALGRPLggwLSDRIGGR 271
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 351 VMLLTSSSVMSIGLAALGAFfymqlvkgdiSSVVWMPVPALIIYNIVYCTGFGPLPWAVlGEMFPANIKSVASSVVAstc 430
Cdd:COG2223 272 RVLLIVFALMALGLLLLALA----------LGSLWLFLVLFLLLGLALGGGNGAVFALV-PDIFPTKNAGAVYGLVG--- 337
                       410       420       430
                ....*....|....*....|....*....|....*.
gi 24644448 431 wTLGFLVTFFYP-----SLDALGSY-YAFWLFAVCM 460
Cdd:COG2223 338 -AAGGLGGFLGPllfgaLLDATGSYtAAFLVFAVLA 372
synapt_SV2 TIGR01299
synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger ...
44-238 2.19e-11

synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.


Pssm-ID: 130366 [Multi-domain]  Cd Length: 742  Bit Score: 66.15  E-value: 2.19e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448    44 MAAVAANLSAFVVGTTLgwtspigPKLKSEDTsdsplsrpITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLL-S 122
Cdd:TIGR01299 174 LALMADGVEVFVVGFVL-------PSAEKDLC--------IPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLiC 238
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   123 SSLFFVLAFGLNMVASEVWILYmSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLF-IVGGIL---YVYAIGPY 198
Cdd:TIGR01299 239 LSVNGFFAFFSSFVQGYGFFLF-CRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFwMIGGIYaaaMAWAIIPH 317
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 24644448   199 V--------SYQALQWCCIVV----PVVFDLV-FYMMPESPYFFAGKGRKSEA 238
Cdd:TIGR01299 318 YgwsfqmgsAYQFHSWRVFVIvcafPCVFAIGaLTFMPESPRFFLENGKHDEA 370
2_A_01_02 TIGR00880
Multidrug resistance protein;
94-225 3.03e-11

Multidrug resistance protein;


Pssm-ID: 273318 [Multi-domain]  Cd Length: 141  Bit Score: 61.13  E-value: 3.03e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448    94 SLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNV 173
Cdd:TIGR00880   5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 24644448   174 RGATGSLMQLFIVGGILYVYAIGPYVsYQALQW------CCIVVPVVFDLVFYMMPES 225
Cdd:TIGR00880  85 RGVALGLMSAGIALGPLLGPPLGGVL-AQFLGWrapflfLAILALAAFILLAFLLPET 141
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
84-460 1.56e-10

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 62.58  E-value: 1.56e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  84 ITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPM 163
Cdd:COG2271  42 LSAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLLWGLATLLFGFATSFWQLLLLRFLLGLGEAGFFPAALK 121
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 164 YVGEISTDNVRGATGSLMQLFI-VGGILYVYAIGPYVSYQALQWCCIV--VPVVFDLVFYmmpespyffagkgrksealk 240
Cdd:COG2271 122 LIAEWFPPKERGRALGIFNAGGpLGGALAPPLLGWLLAAFGWRAAFLIlgLPGLLLALLR-------------------- 181
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 241 slqflrgqsaegvhdemaeiqanveeamaskgtvmdlfknagnrralFICAGLISFQQLSGINVVLFNSQSIFASAnTGL 320
Cdd:COG2271 182 -----------------------------------------------FWLLALAYFLVYFALYGFLTWLPTYLVEV-RGL 213
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 321 DPAIATIIIGCVQVGSSALTPL---VADRLGR--KVMLLTSSSVMSIGLAALGAFfymqlvkgdisSVVWMPVPALIIYN 395
Cdd:COG2271 214 SLAQAGLLLSLPFLAGIVGSLLggwLSDRLGRrrKLVLAIGLLLAALALLLLALL-----------PSPALAIALLFLAG 282
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 24644448 396 IVYCTGFGPLpWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSL-DALGSYYAFWLFAVCM 460
Cdd:COG2271 283 FGLGGAFGLL-WALAAELFPKKARGTASGLVNTFGFLGGALGPLLVGYLlDATGYQAAFLLLAALA 347
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
92-369 2.00e-10

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 62.23  E-value: 2.00e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  92 ISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTD 171
Cdd:cd17489  36 VVGLFTLAALLARPFAGRLLDRFGRKRLLLIGLLIFALATLLYLLATSVALLLVLRLIHGIGWGAFTTAAATLVADIIPP 115
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 172 NVRGATGSLMQLFIVGGIlyvyAIGP--------YVSYQALQWCCIVVPVVFDLVFYMMPEspyffagkgrksealkslq 243
Cdd:cd17489 116 SRRGEGIGYYGLATTLAM----ALGPalglflyqHLGFAVLFIVAAVLALLALLLVFLVKD------------------- 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 244 flrgqsaegvhdemaEIQANVEEAMASKGTVMDLFknagNRRALFICAGLISFQQLSGInVVLFnsQSIFASANTGLDPA 323
Cdd:cd17489 173 ---------------PPPVAAEEAEAGTRAFRRLV----EKKVLPPALILFLASIAYGA-ISTF--LPLYAAERGISNAG 230
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 24644448 324 IATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALGA 369
Cdd:cd17489 231 LFFTVYAIALLLSRPFSGKLSDRKGPKTVIIPGLLLLALGLLLLSF 276
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
84-354 6.01e-10

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 60.83  E-value: 6.01e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448    84 ITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPM 163
Cdd:TIGR00895  49 LDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRRRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNA 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   164 YVGEISTDNVRGATGSLMQL-----FIVGGILYVYAIgPYVSYQALQWCCIVVPVVFDLVFYMMPESPYFFAGKGRKSEA 238
Cdd:TIGR00895 129 LVSEYAPKRFRGTAVGLMFCgypigAAVGGFLAGWLI-PVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETV 207
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   239 LKSLQFLRGQSAEGVHDEMAEIQANVEEAmasKGTVMDLFKNAGNRRALFICAGlISFQQLSginVVLFNSQSIFASANT 318
Cdd:TIGR00895 208 RRIVNAIAPQMQAEAQSALPEQKSTQGTK---RSVFKALFQGKTARITVLLWLL-YFMLLVG---VYFLTNWLPKLMVEL 280
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 24644448   319 GLDPAIATIIIGCVQVG---SSALTPLVADRLGRKVMLL 354
Cdd:TIGR00895 281 GFSLSLAATGGALFNFGgviGSIIFGWLADRLGPRVTAL 319
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
90-460 1.44e-09

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 59.87  E-value: 1.44e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  90 AWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEIS 169
Cdd:COG0738  46 GLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLLMALGLLLFALAPSYPLLLLALFLLGLGLGLLDVAANPYVAALG 125
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 170 TDNvRGATGSLMQLF-----IVGGILYVYAIGPYVS--YQALQWCCIVVPVVFDLVFYMMPespyffagkgrksealksl 242
Cdd:COG0738 126 PET-AASRLNLLHAFfslgaLLGPLLGGLLILLGLSlsWHLPYLILAVLLLLLALLFLRSK------------------- 185
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 243 qflrgqsaegvhdeMAEIQANVEEAMASKGTVMDLFKnagNRRALFICAGLISFqqlSGINVVLFNSQSIFASANTGLDP 322
Cdd:COG0738 186 --------------LPEIEEEEEEAAGSAASLKSLLK---NPRLLLGGLAIFLY---VGAEGAIGDWLPLYLKDVLGLSE 245
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 323 AIATIIIGCVQVGSSA---LTPLVADRLGRKVMLLTSSSVMSIGLAALGaffymqlvkgdISSVVWMPVPALIIYNIVYC 399
Cdd:COG0738 246 ATAALGLSLFWGGMTIgrfLGGFLLKRFGPVRLLRLSALLAAVGLLLAL-----------LAPGPWLALIGLALVGLGLS 314
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 24644448 400 TGFgPLPWAVLGEMFPANIKSVASSVvaSTCWTLGFLVTffyPSL-----DALGSYYAFWLFAVCM 460
Cdd:COG0738 315 LMF-PTIFSLALDGLGKRTAAAVSAV--LIMGIVGGAIG---PPLigflaDAFGLRAAFLVPLVCY 374
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
90-189 1.47e-09

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 59.60  E-value: 1.47e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  90 AWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEIS 169
Cdd:COG2814 246 GLLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAGSLWLLLLALFLLGFGFGLLFPLLQALVAELA 325
                        90       100
                ....*....|....*....|
gi 24644448 170 TDNVRGATGSLMQLFIVGGI 189
Cdd:COG2814 326 PPEARGRASGLYNSAFFLGG 345
MFS_ShiA_like cd17369
Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This ...
97-425 6.04e-09

Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340927 [Multi-domain]  Cd Length: 408  Bit Score: 57.92  E-value: 6.04e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  97 AVGALVAP---FVAGPMADRIGRKWVLLSSslffVLAFGLNMVA---------SEVW---ILYMSRLIQGFGVGFVMTVQ 161
Cdd:cd17369  51 GVGFLARPlggVVFGHFGDRIGRKKTLVLT----LLLMGIATFLigllptyaqIGILapiLLVLLRLLQGLALGGEWGGA 126
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 162 PMYVGEISTDNVRGATGSLMQLFIVGGILY----VYAIGPYVSYQALQ--------WCCIVVPVVFDLVFYMMPESPYFf 229
Cdd:cd17369 127 VLMAVEHAPPKRRGFYGSFPQLGAPVGLLLatgvFLLLSALLSDEAFLswgwripfLLSAVLVAVGLYIRLRLEETPVF- 205
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 230 agkgrksealkslqflrgqsaegvhdemaeiQANVEEAMASKGTVMDLFKNAgnRRALFICAGLisfqqLSGINVVLFNS 309
Cdd:cd17369 206 -------------------------------RRAKEAGQVVRAPLVEVLRRH--WRALLLAIGL-----RLAENVLFYLF 247
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 310 QS---IFASANTGLDPAIATIIIGCVQVGSSALTPL---VADRLGRKVMLLTSSsvmsiGLAALGAFFYMQLVkgDISSV 383
Cdd:cd17369 248 TTfalSYATQTLGVDRSTVLLAVLIASVVAAITIPLfgwLSDRVGRRPVYLAGA-----LLAALFAFPFFWLL--DTGST 320
                       330       340       350       360
                ....*....|....*....|....*....|....*....|..
gi 24644448 384 VWMPVPALIIYNIVYCTGFGPLPwAVLGEMFPANIKSVASSV 425
Cdd:cd17369 321 WLIVLAAVVVLGVLHGMMYGPQA-AFLAELFPTRVRYTGASL 361
MFS_SV2C cd17440
Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters; ...
44-238 2.76e-08

Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2C exhibits enriched expression in several basal ganglia nuclei, and has been found to be involved in normal operation of the basal ganglia network and could be also be involved in system adaptation in basal ganglia pathological conditions. SV2C belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340998 [Multi-domain]  Cd Length: 479  Bit Score: 56.07  E-value: 2.76e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  44 MAAVAANLSAFVVGTTLgwtspigpklkseDTSDSPLSRPITSDedAWISSLIAVGALVAPFVAGPMADRIGRKWVLL-S 122
Cdd:cd17440   6 MALMADGVEVFVVGFVL-------------PSAETDMCIPNSGS--GWLGSIVYLGMMVGAFFWGGLADKVGRRQSLLiC 70
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 123 SSLFFVLAFGLNMVASEVWILYmSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLF-IVGGIL---YVYAIGPY 198
Cdd:cd17440  71 MSVNGFFAFLSSFVQGYGLFLF-CRLLSGFGIGGAVPTVFSYFAEVLAREKRGEHLSWLCMFwMIGGIYasaMAWAIIPH 149
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|...
gi 24644448 199 V--------SYQALQWCCIVV----PVVFDLV-FYMMPESPYFFAGKGRKSEA 238
Cdd:cd17440 150 YgwsfsmgsAYQFHSWRVFVIvcalPCVSSVVaLTFMPESPRFLLEVGKHDEA 202
MFS_SV2A cd17439
Synaptic vesicle glycoprotein 2A of the Major Facilitator Superfamily of transporters; ...
95-238 2.95e-08

Synaptic vesicle glycoprotein 2A of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. It is unclear how SV2A is involved in correct SV function, but it has been suggested to either act as a transporter or a regulator of exocytosis by mediating Ca2+ dynamics. SV2A has been identified as the molecular target of the antiepileptic drug levetiracetam (LEV). Its expression is decreased in patients with epilepsy and in epileptic animal models. SV2A belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340997 [Multi-domain]  Cd Length: 478  Bit Score: 55.81  E-value: 2.95e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  95 LIAVGALVAPFVAGPMADRIGRKWVLLSS-SLFFVLAFGLNMVASEVWILYmSRLIQGFGVGFVMTVQPMYVGEISTDNV 173
Cdd:cd17439  42 IVYLGMMVGAFLWGGLADRIGRRQCLLISlSVNSVFAFFSSFVQGYGTFLF-CRLLSGVGIGGSIPIVFSYFSEFLAQEK 120
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 174 RGATGSLMQLF-IVGGIL---YVYAIGPYV--------SYQALQWCCIVVPVVFDLVFYM-----MPESPYFFAGKGRKS 236
Cdd:cd17439 121 RGEHLSWLCMFwMIGGIYasaMAWAIIPHYgwsfqmgsAYQFHSWRVFVLVCAFPSVFAIgalttMPESPRFFLENGKHD 200

                ..
gi 24644448 237 EA 238
Cdd:cd17439 201 EA 202
MFS_SV2 cd17363
Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic ...
84-238 3.05e-08

Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. The SV2 family belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340921 [Multi-domain]  Cd Length: 474  Bit Score: 55.96  E-value: 3.05e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  84 ITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSS-SLFFVLAFGLNMVASEVWILYMsRLIQGFGVGFVMTVQP 162
Cdd:cd17363  31 LSNSNKGMLGLIVYLGMMVGAFVWGGLADKLGRKQCLLIAlSVNGVFAFLSSFVQGYGFFLFC-RLLSGIGIGGSIPIVF 109
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 163 MYVGEISTDNVRGATGSLMQLFIVGGILY----VYAIGPY--------VSYQALQWCCIVV----PVVFDLV-FYMMPES 225
Cdd:cd17363 110 SYFAEFLAREKRGEHLSWLCMFWMIGGLYasamAWAIIPHygwgfsmgTAYQFHSWRVFVIvcalPSVASVVaLTFMPES 189
                       170
                ....*....|...
gi 24644448 226 PYFFAGKGRKSEA 238
Cdd:cd17363 190 PRFLLEVGKHDEA 202
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
90-223 3.37e-08

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 55.28  E-value: 3.37e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  90 AWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEIS 169
Cdd:cd17317  28 ALVQTIFFLGVLIGSLLFGYLADRFGRRPVLLLGLVLQIVCGVLSAFSPSYELFLVLRFLVGVTSAGIFTVGFVLGMEIV 107
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*
gi 24644448 170 TDNVRGATGSLMQLFIVGGILYVYAIGPYV-SYQALQWCCIVVPVVFDLVFYMMP 223
Cdd:cd17317 108 GPKYRSFVGILFGLFWALGYMLLALLAYLIrDWRWLQLAISLPGLLFLLLLWWLP 162
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
51-376 8.45e-08

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 54.09  E-value: 8.45e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  51 LSAFVVGTTLGWTSPIGPKLkSEDTSdsplsrpITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLA 130
Cdd:cd17324   6 LAAFAIGTTEYVIQGLLPDI-ARDFG-------VSVAQAGLLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILG 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 131 FGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRG-ATGSLMQLFIVGGILYVYA---IGPYVSYQALQW 206
Cdd:cd17324  78 NLLAALAPSFALLLLARALAGLAHGGFWAIAAAYAADLVPPEKRGrAIGLVFSGLTLGLVLGRPLgglLGQLLGWRAAFL 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 207 CCIVVPVVFDLVFYM-MPESPyffagkgrkSEALKSLQFLRGQSAegvhdemaeiqanveeamaskgtvmdLFKNAGNRR 285
Cdd:cd17324 158 AIAVLALLAALLLWRlLPSLP---------PKKPGSLGLLSSLLL--------------------------LLRNPRLRL 202
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 286 ALFIcaGLISFqqlsGINVVLFNSQSIFASANTGLDPAIATIIIGCVQVGSSALTPLV---ADRLGRKVMLLTSSSVMSI 362
Cdd:cd17324 203 AYLI--TFLLF----GGFFALYTYLAPFLTDVPGFSSSAIIGLLLLFGVAGVVGSPLAgrlADRGGRRALLIALLLLAAA 276
                       330
                ....*....|....
gi 24644448 363 GLAALGAFFYMQLV 376
Cdd:cd17324 277 LLLLTLLGPSPLLL 290
MFS_SV2B cd17438
Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; ...
84-238 9.57e-08

Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2B is a key modulator of amyloid toxicity at the synaptic site and also has an essential role in the formation and maintenance of the glomerular capillary wall. SV2B belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340996 [Multi-domain]  Cd Length: 477  Bit Score: 54.16  E-value: 9.57e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  84 ITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVL-LSSSLFFVLAFGLNMVASEVWILYmSRLIQGFGVGFVMTVQP 162
Cdd:cd17438  31 LSSSNKGMLGLIVYLGMMAGAFIWGGLADKLGRKRCLiISLAINASFAFLSSFVQGYGAFLF-CRLISGFGIGGSLPIVF 109
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 163 MYVGEISTDNVRGATGSLMQLFIVGGILY----VYAIGPY--------VSYQALQWCCIVV----PVVFDLV-FYMMPES 225
Cdd:cd17438 110 AYFSEFLAREKRGEHLSWLCMFWMIGGLYasamAWSIIPHygwgfsmgTNYHFHSWRVFVIicalPCIASIIaLKFMPES 189
                       170
                ....*....|...
gi 24644448 226 PYFFAGKGRKSEA 238
Cdd:cd17438 190 PRFLLEMGKHDEA 202
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
91-219 1.86e-07

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 53.00  E-value: 1.86e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  91 WISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEIST 170
Cdd:cd17329  39 LVLALSAVAGIVASLIGGRLADRFGRKPVMLAGLLLRALGFALLGFAHSPWLFAIALVLTGFGGGLFEPASEAMIADVTT 118
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 24644448 171 DNVRGATGSLMQLFIVGGILYVYAIGPYVSYQALQWCCIVVPVVFDLVF 219
Cdd:cd17329 119 PENRTRAFSLLYWAINLGVAIGPLLGGLLLLYSFRLLFLAAAVLFLLAA 167
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
90-190 2.63e-07

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 52.59  E-value: 2.63e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  90 AWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEIS 169
Cdd:cd17365  37 GPVGSAALFGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQSVLQLALLRFLTGLGLGAAMPNAITLVSEYA 116
                        90       100
                ....*....|....*....|..
gi 24644448 170 TDNVRGATGSLMQL-FIVGGIL 190
Cdd:cd17365 117 PARRRSLAVTLMFCgYPLGAAL 138
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
92-226 2.76e-07

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 52.57  E-value: 2.76e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  92 ISSLIAVGALVAPfVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTD 171
Cdd:cd17474  40 ITAFTLPAAVLMP-VAGVLADRFGRKKVLLPGLLLFGIGGLLCGLSDSFALLLAGRALQGIGAAGLGPLALTLIGDLFEG 118
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 24644448 172 NVRG--------ATGSLMQLF-IVGGIL-YVYAIGPYVSYqalqwcCIVVPVVFDLVFYMMPESP 226
Cdd:cd17474 119 GERAkamglyeaALGLGIAVGpLLGGLLaAISWRYPFFLL------AALIPVAFLAILFLLPEPK 177
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
84-201 4.22e-07

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 51.83  E-value: 4.22e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  84 ITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLF---FVLAFGLNMVASEVWILYMSrLIQGFGVGFVMTV 160
Cdd:cd17316 210 LSPATSSLYLLLISLGALVGALIAGLLSDRIGRKKTLVIGLILsgiLALPLFYLLSGSPTLLLLLL-FILSFFVGGVWGA 288
                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 24644448 161 QPMYVGEISTDNVRG-ATGSLMQLFIVGGILYVYAIGPYVSY 201
Cdd:cd17316 289 LYAYLAELFPTEVRAtGVGLSYNLGRLGGGGAPPLIALLLAS 330
MFS_KgtP cd17367
Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This ...
97-419 5.17e-07

Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This subfamily includes Escherichia coli alpha-ketoglutarate permease (KgtP) and similar proteins. KgtP is a constitutively expressed proton symporter that functions in the uptake of alpha-ketoglutarate across the boundary membrane. Also included is a putative transporter from Pseudomonas aeruginosa named dicarboxylic acid transporter PcaT. The KgtP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340925 [Multi-domain]  Cd Length: 407  Bit Score: 51.91  E-value: 5.17e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  97 AVGALVAP---FVAGPMADRIGRKWVLLSSSLF-----FVLAFGLNMVASEVW---ILYMSRLIQGFGVGFVMTVQPMYV 165
Cdd:cd17367  47 AVGFLMRPiggWLFGRLADRIGRRAALTLSVSLmaagsLVIAVTPTYATIGIWapiILLLARLLQGLSVGGEYGTSATYL 126
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 166 GEISTDNVRGATGSLMQLFIVGGILyvyaigpyvsyqalqwccIVVPVVFDLVFYMMPES--------PYFFAGKGrkse 237
Cdd:cd17367 127 SEVAPPGRRGFYSSFQYVTLIGGQL------------------LALGVLLVLQHTLGEDQmaawgwriPFLLGGVL---- 184
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 238 ALKSLqFLRGQSAEGVHDEMAEiqanvEEAMASKGTVMDLFKNagnRRALFICAGLISFQQLsgINVVLFNSQSIFASAN 317
Cdd:cd17367 185 AVVVL-WLRRGLEETESFEAIA-----ESNEASAGTLRELRRH---PRELLLVVGLTAGGTL--AFYTWTTYLQKFLVNT 253
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 318 TGLDPAIATIIIGCVQVGSSALTPLV---ADRLGRKVMLLTsssvmsIGLAALGAFFYMQLVKGDISSvvWMPVPALIIY 394
Cdd:cd17367 254 AGFSKGDATWITTAALLVFMLLQPLGgrlSDRIGRRPLLLF------FGIGGTLATVPLLSALDHTDS--PYTAFALVLV 325
                       330       340
                ....*....|....*....|....*
gi 24644448 395 NIVYCTGFGPLPWAVLGEMFPANIK 419
Cdd:cd17367 326 GLVFLSGYTSINAVVKAELFPTHVR 350
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
91-460 6.82e-07

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 51.41  E-value: 6.82e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  91 WISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEIST 170
Cdd:cd17477  35 LVASAYYLGILLGSPLVPRLIRRVGHIRAFAAGAAITAVSVLLLALTDSPWVWFLLRFVMGIGLAGLFVVSESWLNALAT 114
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 171 DNVRGATGSLMQLFIVGGilyvYAIGPYVsyqaLQWCCIVVPVVFDLVFYMMpespyffagkgrkseALKSLQFLRGQSA 250
Cdd:cd17477 115 NENRGRVLGLYSTVLGLG----FALGPLL----LALVGTAGALPFLIAAVLL---------------LLALVPLLLTRRA 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 251 EGVHDEmaeiqanveeamASKGTVMDLFknagnRRALFICAGLISFQQLSGINVVLFnsqSIFASANtGLDPAIATIIIG 330
Cdd:cd17477 172 APEIEE------------AESISLRRLL-----RIAPLALLGAFVAGFLEGAFYSLL---PLYGLRL-GLSVAQAALLLA 230
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 331 CVQVGSSALTPLV---ADRLGRKVMLLTSSSVMSIGLAALGAFFYmqlvkgdissvvwMPVPALIIYNIVYCTGFG--PL 405
Cdd:cd17477 231 AFVLGGLLLQWPLgwlADRFDRRRVLLGCALLGALAALLLPLVPG-------------LPLALLVLLFLWGGAAGPlyTL 297
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 24644448 406 PWAVLGEMFPANiKSVASSVVASTCWTLGFLV--TFFYPSLDALGSYYAFWLFAVCM 460
Cdd:cd17477 298 ALALAGDRLPGD-ELVAANAALLLLYGLGSVIgpLLAGALMDAFGPHGLFLFLAAVA 353
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
90-206 1.87e-06

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 50.29  E-value: 1.87e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  90 AWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVA--SEVWILYMSRLIQGFGVGFVMTVQPMYVGE 167
Cdd:COG2211 267 GLLLALYFLAALLGAPLWPRLAKRFGKKKAFIIGLLLAALGLLLLFFLgpGNLWLLLVLAALAGIGLGAILVLPWAMLAD 346
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 24644448 168 I-------STDNVRGATGSLMQLFIVGGilyvYAIGPYVSYQALQW 206
Cdd:COG2211 347 VvdydewkTGRRREGLYFGIFTFAIKLG----QALAGALAGLLLAL 388
2A0109 TIGR00887
phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the ...
79-482 3.04e-06

phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). [Transport and binding proteins, Anions]


Pssm-ID: 129965 [Multi-domain]  Cd Length: 502  Bit Score: 49.73  E-value: 3.04e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448    79 PLSRPITSDEDAWISSLIAVGALVAPFVAGPMADRIGRK-------WVLLSSSLFFVLAFGLNMVASEVWILYMsRLIQG 151
Cdd:TIGR00887  48 HGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKrvygmelIIMIIATVASGLSPGSSPKSVMATLCFW-RFWLG 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   152 FGVGFVMTVQPMYVGEISTDNVRGATGSL---MQLF--IVGGILYVYAIG------PYVSYQA-----------LQWCCI 209
Cdd:TIGR00887 127 VGIGGDYPLSAIITSEFATKKWRGAMMAAvfaMQGFgiLAGAIVALIVLAgfkhslEAAADEAsctgscvpavdYMWRIL 206
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   210 V----VPVVFDLVFYM-MPESPYFFAGKGRKSEALKSLQFLRGQ-SAEGVHDEMAEIQANVEEAMASKGtvmDLFKNAGN 283
Cdd:TIGR00887 207 IgfgaVPALLALYFRLtIPETPRYTADVAKDVEQAASDMSAVLQvKIEAEPDEVEKASTAVEVPKASWS---DFFTHFFK 283
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   284 RRALFICAGL--------ISFQQLSGINVVLFNS--QSIFASANTGL----DPAIA-TIIIGCVQVGSSALTPLVADRLG 348
Cdd:TIGR00887 284 WRHGKHLLGTagswflldIAFYGVNLNQKVILSAigYSPPAATNNAYeelyKTAVGnLIIALAGTVPGYWVTVFLVDIIG 363
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   349 RKVMLLTSSSVMSIGLAALGAFFYMqlvkgdissvvWMPVPALIIYNIV-YCTGFGP--LPWAVLGEMFPANIK------ 419
Cdd:TIGR00887 364 RKPIQLMGFFILTVLFFVLGFAYNH-----------LSTHGFLAIYVLAqFFANFGPnaTTFIVPGEVFPTRYRstahgi 432
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   420 SVASSVVASTCWTLGFL-------VTFFYPSLDALGsyYAFWLFAVCMVVAFFFVLFVVmETKGLSLQQI 482
Cdd:TIGR00887 433 SAASGKAGAIIGQFGFLylaqhgdPTKGYPTGIWMG--HVLEIFALFMFLGILFTLLIP-ETKGKSLEEL 499
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
94-222 3.54e-06

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 49.11  E-value: 3.54e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  94 SLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNV 173
Cdd:cd17325 242 GAQGLASALSQPPAGKLSDRIGRKPLILIGLLLSAVALLLLPLATSFWLLLLLLALLGLGLGLVFPATLALLADIVPPEG 321
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 24644448 174 RGATGSLMQLF-----IVGGILYVYAIGPYvSYQALQWCCIVVPVVFDLVFYMM 222
Cdd:cd17325 322 RGTAMGLFNTAfslgmVLGPLLGGFLYDAF-GFATPFLAAAALLLLAAVLFLLL 374
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
84-206 6.22e-06

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 48.47  E-value: 6.22e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  84 ITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPM 163
Cdd:cd17333  28 LNVADVSVIFSSQNAGYLIGSLLAGFLMKRLGRRRTLILGLLLISLALALIFATPSIYLFVVLMFLAGLGAGILDTGANT 107
                        90       100       110       120
                ....*....|....*....|....*....|....*....|...
gi 24644448 164 YVGEISTDNvRGATGSLMQLFIVGGILYVYAIGPYVSYQALQW 206
Cdd:cd17333 108 FVGALFEES-SATRLNVLHGFFGLGALIGPLIATSLLTSELSW 149
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
94-241 8.33e-06

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 47.96  E-value: 8.33e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  94 SLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVqpmyVGEISTDNV 173
Cdd:cd17320  41 SAYLLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLLCALASSIEQLLIARFLQGLGAAAGSVV----ARAIVRDLY 116
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 24644448 174 RGATGSLMQLFIVGGILYVYAIGPYV--------SYQALQWC-CIVVPVVFDLVFYMMPESPYFFAGKGRKSEALKS 241
Cdd:cd17320 117 SGAELAKIFSLLMMILAIAPALAPLLggllllffGWRAIFVFlALLGLLLLLLVLLFLPETLPEEKRKPLLSSLLRA 193
PRK15403 PRK15403
multidrug efflux MFS transporter MdtM;
94-197 9.93e-06

multidrug efflux MFS transporter MdtM;


Pssm-ID: 237958 [Multi-domain]  Cd Length: 413  Bit Score: 47.90  E-value: 9.93e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   94 SLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTvqpmyVGEISTDNV 173
Cdd:PRK15403  58 SLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIAT-----VGYVTVQEA 132
                         90       100
                 ....*....|....*....|....*
gi 24644448  174 RGATGSLMQLFIVGGILYVY-AIGP 197
Cdd:PRK15403 133 FGQTKGIKLMAIITSIVLVApIIGP 157
MFS_SLC22A1_2_3 cd17379
Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, ...
88-220 1.20e-05

Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, and 3) of the Major Facilitator Superfamily of transporters; This sufamily includes solute carrier family 22 member 1 (SLC22A1, also called organic cation transporter 1 or OCT1), SLC22A2 (or OCT2), SLC22A3 (or OCT3), and similar proteins. OCT1-3 have similar basic functional properties: they are able to translocate a variety of structurally different organic cations in both directions across the plasma membrane; to translocate organic cations independently from sodium, chloride or proton gradients; and to function as electrogenic uniporters for cations or as electroneutral cation exchangers. They show overlapping but distinct substrate and inhibitor specificities, and different tissue expression pattern. In humans, OCT1 is strongly expressed in the liver, OCT2 is highly expressed in the kidney where it is localized at the basolateral membrane of renal proximal tubules, and OCT3 is most strongly expressed in skeletal muscle. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. The SLC22A1-3 subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340937 [Multi-domain]  Cd Length: 340  Bit Score: 47.35  E-value: 1.20e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  88 EDAW----ISSLIAVGALVAPFVAGPMADRIGRKWVLLsSSLFFVLAFGLNMVASEVWILYMS-RLIQGFGVGFVMTVQP 162
Cdd:cd17379  30 EDAWkldlFQSSLNLGFLIGSIVIGYLADRFGRKVCFL-ISILGNGVSGVLMAFSPNYPWFLIfRFLQGLFGKGGWMTGY 108
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 24644448 163 MYVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYV-SYQALQwCCIVVPVVFDLVFY 220
Cdd:cd17379 109 VLVTEFVGSKYRRTVGIVYQMFFTLGLLILPGIAYFIpHWRWLQ-LAVTLPNFLFLLYY 166
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
91-229 2.53e-05

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 46.42  E-value: 2.53e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  91 WISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQpMYVGEIST 170
Cdd:cd17330  38 LLQSSYSLGQFLASPLWGRLSDRYGRKPVLLLSLAGSAVSYVLLGLSRNLWLLFLARFLDGLTGGNVSVAQ-AYIADITD 116
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 24644448 171 DNVR----GATGSLMQL-FIVGGILYVYAIGPYVSYQALQWCCIVVPVVFDLVFYMMPESPYFF 229
Cdd:cd17330 117 EEERakafGIISAAFGLgFILGPALGGFLSTPYGYALPFLVAAALALLNLVLVLFFLPPLRRLL 180
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
94-214 3.20e-05

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 46.01  E-value: 3.20e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  94 SLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLnMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNV 173
Cdd:cd17478 237 SLFLFAGAIGTLIGGPLSDRFGRRRVIIASLLLAAPFLLL-FLLTPGIWSYILLVLAGFLLFASFPVTVVLAQELLPGNV 315
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....
gi 24644448 174 RGATGSLMQL-FIVGGILYVY--AIGPYVSYQALQWCCIVVPVV 214
Cdd:cd17478 316 GLASGLMMGLsFGLGGIGAPVlgALADAFGLESVLLILALLPLL 359
MFS_OFA_like cd17353
Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of ...
90-460 3.61e-05

Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340911 [Multi-domain]  Cd Length: 389  Bit Score: 46.06  E-value: 3.61e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  90 AWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSR-LIQGFGVGFVmtvqpmYVGEI 168
Cdd:cd17353  41 ALAFTLTIVFLAISAPFAGRLVDRGGPRKAILIGGILFGLGFILSAFAISLPLLFLGYgVLGGIGAGIG------YITPV 114
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 169 ST------DNVRGATGSLMQLFIVGGILYVYAIGPYVSYQALQWCCIVVPVVFdLVFYMMpespyffagkgrksealksL 242
Cdd:cd17353 115 STavkwfpDKRGLATGIVIAGFGLGSLIFSPLIAYLINTVGVPTTFLILGIIF-LIIIVI-------------------G 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 243 QFLRGQSAEGVHDEMAEIQANVEEAMASKGTVMDLFKNAgNRRALFICAGLISFqqlSGInvVLFNSQSIFASANTGLDP 322
Cdd:cd17353 175 AFLIRDPPKGWVPPGVDPLANNAENSPRDYTPREMLRTP-TFWLLWLMFFLNAT---AGL--MLIGQAKPIGQEFAGLDA 248
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 323 AIATIIIGCVQVGSSALTPL---VADRLGRKVMLLTSSSVMSIGLAALGAffymqlvkgdISSVVWMPVPALIIYNIVYC 399
Cdd:cd17353 249 GIAALAVSILSIFNGGGRPFwgwLSDKIGRKNTLSIAFLIQGVAMFLLPF----------IGSVAVLFVLGVALIGFCYG 318
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 24644448 400 TGFGPLPwAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSLDALGSY-YAFWLFAVCM 460
Cdd:cd17353 319 GGFALFP-ALTADFFGTKNAGTNYGLLYTAKGVGGLIGPIIAAYVLYTGGYnAAFIIAAALS 379
MFS_PhT cd17364
Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This ...
98-460 3.83e-05

Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of predominantly fungal and plant high-affinity inorganic phosphate transporters (PhT or PiPT), which are involved in the uptake, translocation, and internal transport of inorganic phosphate. They also function in sensing external phosphate levels as transceptors. Phosphate is crucial for structural and metabolic needs, including nucleotide and lipid synthesis, signalling and chemical energy storage. The Pht subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340922 [Multi-domain]  Cd Length: 389  Bit Score: 45.73  E-value: 3.83e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  98 VGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVA------SEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTD 171
Cdd:cd17364  50 VGTIIGQLFFGFLGDRFGRKRVYGVELIIMIIGTILSALSpgstplGVMGWLIFFRFLLGIGIGGDYPLSATIMSEYANK 129
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 172 NVRGAtgslmqlfIVGGILYVYAIGpyvsyqalqwccIVVPVVFDLVFYMMPESPyFFAGKGRKSEALKSLQFLRGqsae 251
Cdd:cd17364 130 KRRGA--------LIAAVFAMQGFG------------ILAGAIVTLILSAIFEHP-LPAGTYHHADLVWRIVLGLG---- 184
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 252 gvhdemaeiqanveeamASKGTVMDLFknagnRRALFICAGL-----ISFqqlSGINVvlfNSQSIFAS---------AN 317
Cdd:cd17364 185 -----------------AIPALSVLYF-----RKHLLGTAGTwflldIAF---YGQNL---FQSTIISAigfsktmnaYQ 236
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 318 TGLDPAIA-TIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALgAFFYMQLVKGdissvvwmPVPALIIYNI 396
Cdd:cd17364 237 ELFNIAVGqLIIALAGTVPGYWFTVFLIDRIGRKKIQMMGFFGMTIFLLIL-AGPYDHWKIS--------TIGFFVLYGL 307
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 24644448 397 VYCTG-FGP--LPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSL-DALGSYYAFWLFAVCM 460
Cdd:cd17364 308 TFFFSnFGPntTTFIVPAEVFPARVRSTCHGISAASGKIGAIVGSFLFLSLtQNIGVRNVLIILAGVA 375
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
90-376 6.56e-05

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 45.30  E-value: 6.56e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  90 AWISSLIAVGALVAPFVAGPMADRIGRKWVL-----LSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMY 164
Cdd:cd06173  37 GLVLAAFFLPFLLFSPFAGVLADRFDRRRLLiladlLRALLAAVLALLALLGSLSLWLLLVLAFLLGIASAFFGPARQAL 116
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 165 VGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYVsyqaLQWCCIVVPVVFDLVFYMMPESPYFFAGKGRKSEALKSLQF 244
Cdd:cd06173 117 LPELVPKEQLVRANALNSLATQLARIIGPALGGLL----VALLGPGGAFAINALSFLLSALLLLFIRRPPPAAPGESSSL 192
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 245 LRGQSAEGvhdemaeiqanveeamaskgtvMDLFKNAGNRRALFICAGLISFqqLSGINVVLFnsqSIFASANTGLDPAI 324
Cdd:cd06173 193 LLRDLREG----------------------LRYLRRSPLLRLLLLALALFAL--LGGALTVLL---PLLAKEVLGGGAAG 245
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 24644448 325 ATIIIGCVQVGS---SALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMQLV 376
Cdd:cd06173 246 YGLLLAAFGVGAllgALLLGRLSKRRRRGRLLLIGALLLGLALLVLGLSPSLWLL 300
MFS_MelB_like cd17332
Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major ...
88-168 9.47e-05

Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily; This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340890 [Multi-domain]  Cd Length: 424  Bit Score: 44.90  E-value: 9.47e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  88 EDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASE--VWILYMSRLIQGFGVGFVMTVQPMYV 165
Cdd:cd17332 257 ELVLLLLLILSGALLALLPWPPLKKRFGKKKAFFIGLLLAILGLLLLFFLPPgnLVLILVLAVLAGIGYGGANLLPWAML 336

                ...
gi 24644448 166 GEI 168
Cdd:cd17332 337 ADV 339
PRK10473 PRK10473
MdtL family multidrug efflux MFS transporter;
107-159 9.66e-05

MdtL family multidrug efflux MFS transporter;


Pssm-ID: 182486 [Multi-domain]  Cd Length: 392  Bit Score: 44.63  E-value: 9.66e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 24644448  107 AGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGF--VMT 159
Cdd:PRK10473  58 AGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCcyVVA 112
MFS_LmrB_MDR_like cd17503
Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) ...
84-160 9.86e-05

Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341046 [Multi-domain]  Cd Length: 380  Bit Score: 44.49  E-value: 9.86e-05
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 24644448  84 ITSDEDAWISS--LIAVGALVApfVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTV 160
Cdd:cd17503  28 ASLDTVQWVITsyLLALAIMIP--LSGWLADRFGTRRLFLTALALFTLGSLLCGLAPNLASLIIFRILQGFGGGVLIPL 104
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
83-155 1.04e-04

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 44.49  E-value: 1.04e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 24644448  83 PITSDEDAWI-SSLIAVGALVAPFvAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVG 155
Cdd:cd17504  27 GTSAAAVSWVlTAYLLVGAVSTPI-LGRLGDLYGRKKVLLIVLAIYTAGSLLAAFAPNLPVLIAGRALQGIGGA 99
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
83-251 1.05e-04

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 44.60  E-value: 1.05e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  83 PITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQP 162
Cdd:cd17371  30 GLDEAEAGLLGTVTLAGGAIGGILGGILADRFGRVRVLVITILLFAVFTLLCGFAQNYWQLLILRALAGLGFGGEWAAGA 109
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 163 MYVGEISTDNVRGATGSLMQLF-IVGGILYVYA-------IGPYVSYQALQWCCIVVPVVFDLVFYMMPESPYFFAGKGR 234
Cdd:cd17371 110 ALMAEYVPARHRGKALGYVQSGwAVGWLLATLLaallfplLPPEIAWRVLFLLGALPALLVLFIRRFVKEPPQWQAARAA 189
                       170
                ....*....|....*..
gi 24644448 235 KSEALKSLQFLRGQSAE 251
Cdd:cd17371 190 RRHFADRPSLRELFSPP 206
MFS_ProP cd17366
Proline/betaine transporter of the Major Facilitator Superfamily of transporters; This ...
97-425 1.11e-04

Proline/betaine transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of Escherichia coli proline/betaine transporter, also called proline porter II (PPII), and similar proteins. ProP is a proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in the bacterial osmoregulatory response. The ProP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340924 [Multi-domain]  Cd Length: 377  Bit Score: 44.27  E-value: 1.11e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  97 AVGALVAP---FVAGPMADRIGRKWVLLSSSLFFVLA-FGLNMVASE----VW---ILYMSRLIQGFGVGFVMTVQPMYV 165
Cdd:cd17366  47 AVAFLVRPlggLVFGPLGDKYGRQKVLAITIILMAAStFCIGLLPTYatigVWapiLLLLARMVQGFSTGGEYGGAATFV 126
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 166 GEISTDNVRGATGSLMQL-----FIVGGILYVYAIGPYVSYQALQWCCIVvpvvfdlvfymmpesPYFFAGkgrksealk 240
Cdd:cd17366 127 AEYAPDRKRGFLGSWLEFgtlagFILGAGLVTLLTLLLTEAQMLDWGWRI---------------PFLIAA--------- 182
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 241 slqflrgqsaegvhdemaeiqanveeAMASKGTVMdlfknagnRRALFICAGLISFQQLSgiNVVLFNSQSIFASANTGL 320
Cdd:cd17366 183 --------------------------PLGLVGLYL--------RRPLLICIGLVLVFNVT--NYMLLSYMPSYLEETLGY 226
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 321 DPAIATIIIGCVQVGSSALTP---LVADRLGRKVMLLTSSSVMSIglAALGAFFYMQlvkgdiSSVVWMPVPALIIYNIV 397
Cdd:cd17366 227 SETHGLLVIIIIMVTMLVLQPflgRLSDRVGRKPVYAAGLAGLLV--LAVPAFLLMN------SGSIAAIFIGLLVLGLL 298
                       330       340
                ....*....|....*....|....*...
gi 24644448 398 YCTGFGPLPwAVLGEMFPANIKSVASSV 425
Cdd:cd17366 299 LSCYTATMA-STLPALFPTHVRYSALAI 325
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
28-460 1.54e-04

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 44.09  E-value: 1.54e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  28 NTRTMSPEPVKSGRIFMAAVAANLSAFVVGTTLGWTSPIGPKLKSedtsDSPLSRPITSdedaWISSLIAVGALVAPFVA 107
Cdd:COG2807   2 STTSSSARRSRRAGRWLLLLAIVLVALNLRPAITSVGPLLPEIRA----DLGLSATQAG----LLTTLPLLAFGLFAPLA 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 108 GPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATG---SLMQLF 184
Cdd:COG2807  74 PRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALLLAGTALIGAGIAVGNVLLPGLIKRWFPDRVGLMTGlytAAMGLG 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 185 IVGGILYVYAIGPYVSYQALQWCCIVVPVVFDLVFYmmpespyffagkgrksealksLQFLRGQSAEgvhdemaeiqanv 264
Cdd:COG2807 154 AALAAGLTVPLAAALGWRGALAVWALLALLALLLWL---------------------PLLRRRPAAA------------- 199
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 265 eEAMASKGTVMDLFknagnRRALFICAGLISFQQLSGINVVLFNSQSIFASAntGLDPAIA---TIIIGCVQVGSSALTP 341
Cdd:COG2807 200 -AAAPAAASLRSLW-----RSPLAWLLTLFFGLQSLLYYAVVAWLPPILRDA--GLSAATAgllLSLFQLAGIPGSLLVP 271
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 342 LVADRLG-RKVMLLTSSSVMSIGLAALgaffymqlvkgdissvVWMPVPALIIYNIVYCTGFG---PLPWAVLGEMFPAN 417
Cdd:COG2807 272 LLADRLGdRRPLLLLLGLLGLAGLLGL----------------LLAPGSLPWLWAVLLGLGQGglfPLALTLIGLRARTP 335
                       410       420       430       440
                ....*....|....*....|....*....|....*....|....*....
gi 24644448 418 IKSVASSVVASTCwtlGFLVTFFYPSL-----DALGSY-YAFWLFAVCM 460
Cdd:COG2807 336 AEAAALSGMAQSV---GYLLAALGPLLvgalhDATGSWtAALLLLAALA 381
MFS_Set cd17471
Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; ...
89-211 1.98e-04

Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341024 [Multi-domain]  Cd Length: 371  Bit Score: 43.69  E-value: 1.98e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  89 DAWISSLIAVGALVA-PF--VAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYV 165
Cdd:cd17471 234 ESWVGLLFGLAAALEiPImlLAGLLAKRFGKRRLLLAGFLAGVLFYLGLALATSLWQLIALQLLNAIFIGITAGLGISYF 313
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 24644448 166 GEISTDNVRGATGSLMQLFIVGGIL---YVYAIGPYVSYQALQWCCIVV 211
Cdd:cd17471 314 QDLMPGQPGLATTLYSNASRIGSLLgglLAGVIAQYFGYRAVFLVCAVL 362
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
91-160 2.02e-04

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 43.72  E-value: 2.02e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 24644448  91 WISSLIAVG-ALVAPFvAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTV 160
Cdd:cd17473  39 LLLTLPALFiALFAPL-AGWLADRFGRKRLLIAGLLLYGIGGVAGLFLDSLYALLASRALLGIGVAGIMTL 108
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
95-206 2.43e-04

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 43.31  E-value: 2.43e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  95 LIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNvR 174
Cdd:cd17324 242 LFGVAGVVGSPLAGRLADRGGRRALLIALLLLAAALLLLTLLGPSPLLLLVGLVLWGLGFFAAHSALQTRVLRLAPEA-R 320
                        90       100       110
                ....*....|....*....|....*....|..
gi 24644448 175 GATGSLMQLFIVGGIlyvyAIGPYVSYQALQW 206
Cdd:cd17324 321 GLASSLYLAAYNLGG----ALGAALGGLVLDH 348
MFS_TetA cd17388
Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily ...
60-174 3.07e-04

Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340946 [Multi-domain]  Cd Length: 385  Bit Score: 43.01  E-value: 3.07e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  60 LGWTSPIGPKLKSEDTSDsplsrpiTSDEDAWISSLIAVGALV----APfVAGPMADRIGRKWVLLSSSLFFVLAFGLNM 135
Cdd:cd17388  15 IGLIMPVLPTLLREFVGD-------SADAATHYGVLLALYALMqfifAP-ILGALSDRFGRRPVLLLSLAGAALDYLLMA 86
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 24644448 136 VASEVWILYMSRLIQGFgVGFVMTVQPMYVGEISTDNVR 174
Cdd:cd17388  87 FAPTLWWLYLGRIIAGI-TGATGAVAAAYIADVTPPEQR 124
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
97-214 3.46e-04

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 42.99  E-value: 3.46e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  97 AVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGA 176
Cdd:cd17328  44 IISYMVLSPIFGYLGDRYNRKWILAVGILIWSAATLLSSFAPNFWQLLLFRALVGIGEASYSPIAPTIIADLFPKEKRTR 123
                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 24644448 177 TGSLMQLFIVGGILYVYAIGPYVSYQAL--QWCCIVVPVV 214
Cdd:cd17328 124 ALGVFYFAIPLGSGLGYVVGGLVAQATGgwRWAFRVTGVL 163
PRK15402 PRK15402
MdfA family multidrug efflux MFS transporter;
91-160 5.10e-04

MdfA family multidrug efflux MFS transporter;


Pssm-ID: 185300 [Multi-domain]  Cd Length: 406  Bit Score: 42.23  E-value: 5.10e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 24644448   91 WIS-SLIA--VGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTV 160
Cdd:PRK15402  49 WVPtSMTAylAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAV 121
MFS_LmrB_MDR_like cd17503
Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) ...
97-159 1.31e-03

Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341046 [Multi-domain]  Cd Length: 380  Bit Score: 41.02  E-value: 1.31e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 24644448  97 AVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASE---VWILYMSRLIQGFGVGFVMT 159
Cdd:cd17503 224 GLASAILSPLVGRLLDKFGPRLLLLAGLLLLALGTLLLAFLTPdtsLWLIILPLFIRGLGMGLVFM 289
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
91-175 1.42e-03

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 41.00  E-value: 1.42e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  91 WISS--LIAVGALVAPfvAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEI 168
Cdd:cd17321  35 WVVNayLLAFAALLLL--AGRLGDRFGRKRVFLIGLALFGLASLLCALAPSLAFLIAARALQGIGAAAIMPASLALIAAT 112

                ....*..
gi 24644448 169 STDNVRG 175
Cdd:cd17321 113 FPGERRG 119
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
92-221 1.61e-03

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 40.66  E-value: 1.61e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  92 ISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTD 171
Cdd:cd17489 232 FFTVYAIALLLSRPFSGKLSDRKGPKTVIIPGLLLLALGLLLLSFAGSPWMLLLAAVLYGLGFGLLFPALQALAVDLVPP 311
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 24644448 172 NVRGATGSLMQLFIVGGIlyvyAIGPYV--------SYQALQWCCIVVPVVFdLVFYM 221
Cdd:cd17489 312 HRRGAANGTFFIFFDLGI----GLGGLLlglvaelfGYRAMFLLAAVVVLLA-LVLYI 364
MFS_MCT_SLC16 cd17352
Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; ...
90-159 1.79e-03

Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; The animal Monocarboxylate transporter (MCT) family is also called Solute carrier family 16 (SLC16 or SLC16A). It is composed of 14 members, MCT1-14. MCTs play an integral role in cellular metabolism via lactate transport and have been implicated in metabolic synergy in tumors. MCT1-4 are proton-coupled transporters that facilitate the transport across the plasma membrane of monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and ketone bodies such as acetoacetate, beta-hydroxybutyrate and acetate. MCT8 and MCT10 are transporters which stimulate the cellular uptake of thyroid hormones such as thyroxine (T4), triiodothyronine (T3), reverse triiodothyronine (rT3) and diidothyronine (T2). MCT10 also functions as a sodium-independent transporter that mediates the uptake or efflux of aromatic acids. Many members are orphan transporters whose substrates are yet to be determined. The MCT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340910 [Multi-domain]  Cd Length: 361  Bit Score: 40.61  E-value: 1.79e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 24644448  90 AWISSL-IAVGALVAPFVaGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSR-LIQGFGVGFVMT 159
Cdd:cd17352  41 AWIGSLlLGVSLFSGPLS-SALVNRFGCRPVAIAGGLLAALGLLLSSFATSLWQLYLTYgVLGGLGLGLIYS 111
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
91-190 2.49e-03

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 40.29  E-value: 2.49e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  91 WISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEIST 170
Cdd:cd06173 248 LLLAAFGVGALLGALLLGRLSKRRRRGRLLLIGALLLGLALLVLGLSPSLWLLLAALFLLGLAGGLFNVPLNTLLQLRVP 327
                        90       100
                ....*....|....*....|
gi 24644448 171 DNVRGATGSLMQLFIVGGIL 190
Cdd:cd06173 328 DELRGRVFSVYNALNSGAMP 347
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
94-224 2.67e-03

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 39.87  E-value: 2.67e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  94 SLIAVGALVAPFVAGPMADRIGRKWV-LLSSSLFFVLAFGLnMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDN 172
Cdd:cd17323  41 SLFVLGFGLGPLIWAPLSELYGRRPVyLVSLFIFVIFQIGC-ALAPNIAMLIILRFLQGFFGSSPLAIGAGTIADLFTPE 119
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 24644448 173 VRGATGSLMQLF---------IVGGILYVYAigpyvSYQALQWC-CIVVPVVFDLVFYMMPE 224
Cdd:cd17323 120 ERGKAMGVYSLGpllgpalgpIIGGFITQSL-----GWRWIFWFlAIISGFCLILIFLFLPI 176
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
98-197 3.04e-03

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 39.94  E-value: 3.04e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  98 VGALVAPfVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVmtvqPMYVGEISTDNVRGAT 177
Cdd:cd17391  48 VSAIFSP-IWGRLADRYGRKPMLLRASLGMAIVIGLMAFVTNVWQLLILRLLQGVFSGYV----PNATALIASQTPKEKS 122
                        90       100
                ....*....|....*....|...
gi 24644448 178 G---SLMQLFIVGGILyvyaIGP 197
Cdd:cd17391 123 GwalGTLSTGVVAGTL----IGP 141
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
90-196 3.65e-03

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 39.48  E-value: 3.65e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  90 AWISSLIAVGALVAPFVAGPMADRIG---RKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVG 166
Cdd:cd17319 218 GLLAAIPFLAGAIGMILGGRLSDRLLrgaRRLVIIIGLLLAAVGLLLAYLTTSPVVAVILLSLAGFGIGAASPVFWSLPA 297
                        90       100       110
                ....*....|....*....|....*....|.
gi 24644448 167 EISTDNVRGATGSLMQLF-IVGGILYVYAIG 196
Cdd:cd17319 298 DLLPGEAAATAGGLINSGgNLGGFVAPLLIG 328
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
24-206 3.69e-03

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 39.46  E-value: 3.69e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  24 IREGNTRTMSPEPVKSGRIFMAAVAANLSAFVVGTTLGWTSPIGPKLKSEDTsdsplsrpITSDEDAWISSLIAVGALVA 103
Cdd:cd17477 168 TRRAAPEIEEAESISLRRLLRIAPLALLGAFVAGFLEGAFYSLLPLYGLRLG--------LSVAQAALLLAAFVLGGLLL 239
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 104 PFVAGPMADRIGRKWVLL-SSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGE-ISTDNVRGATGSLM 181
Cdd:cd17477 240 QWPLGWLADRFDRRRVLLgCALLGALAALLLPLVPGLPLALLVLLFLWGGAAGPLYTLALALAGDrLPGDELVAANAALL 319
                       170       180
                ....*....|....*....|....*
gi 24644448 182 QLFIVGGIlyvyaIGPYVSYQALQW 206
Cdd:cd17477 320 LLYGLGSV-----IGPLLAGALMDA 339
emrD PRK11652
multidrug transporter EmrD;
105-155 4.36e-03

multidrug transporter EmrD;


Pssm-ID: 183259 [Multi-domain]  Cd Length: 394  Bit Score: 39.51  E-value: 4.36e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 24644448  105 FVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVG 155
Cdd:PRK11652  61 LFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTG 111
MFS_unc93_like cd17338
Unc-93 family of the Major Facilitator Superfamily of transporters; The Unc-93 family is ...
94-459 4.82e-03

Unc-93 family of the Major Facilitator Superfamily of transporters; The Unc-93 family is composed of Caenorhabditis elegans uncoordinated protein 93 (also called putative potassium channel regulatory protein unc-93) and similar proteins including three vertebrate members: protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET). Unc-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. The human UNC93A gene is located in a region of the genome that is frequently associated with ovarian cancer, however, there is no evidence that UNC93A has a tumor suppressor function. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. The unc93-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340896 [Multi-domain]  Cd Length: 388  Bit Score: 39.25  E-value: 4.82e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  94 SLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEvWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNV 173
Cdd:cd17338  36 GILYSSFAVSSFIAPLLVKLLGEKITLVLGGLGYAIFIASNIFPIW-GTLVPASIILGFAAAILWTAQGTYITRISDESN 114
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 174 RGATG----SLMQLFIVGGILYVYAIGPYVSYQALQwccIVVPVVFdLVFYMMPESPYFfagkgrksealkslqFLRGQS 249
Cdd:cd17338 115 IGRNFgifwSIFQLSQVFGNLISLALLNHSKGSSGT---TILFIVF-MAIMLVGIILLF---------------FLRGPD 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 250 AEGVHDEMAEIQANVEEAMASKGTVMDLFKnagNRRALFicagLISFQQLSGINVVLFNS---QSIFASANTGLDPAIAT 326
Cdd:cd17338 176 NEVITEIESSSVGESMEKKNLFKLPFTLLK---DKRFLL----LIPLLIYSGLEQTFFSGvftLIIGTPTTGIARVGYVM 248
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 327 IIIGCVQVGSSALTPLVAD-RLGRKVMLLTSSSVmsIGLAALGAFFYMQLVKGdISSVVWMPVPALIIYNIVYcTGFGPL 405
Cdd:cd17338 249 AVYGFGDALGSLVAGLLSDwRFGRIVLAVIGAFV--HIASLILLFLSGNVTPY-GLGGSWLAYVSAILWGLGD-AIFNTQ 324
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 24644448 406 PWAVLGEMFPANiksvasSVVASTCW----TLGFLVTFFY----PSLDALGSYYAFWLFAVC 459
Cdd:cd17338 325 IYALLGSLYEND------SESAFAVYklwqSIATAIAYFLspylPLFVKLFVLLALLILLAI 380
MFS_SLC22A18 cd17331
Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; ...
90-371 5.31e-03

Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 18 (SLC22A18) is also called Beckwith-Wiedemann syndrome chromosomal region 1 candidate gene A protein (BWR1A or BWSCR1A), efflux transporter-like protein, imprinted multi-membrane-spanning polyspecific transporter-related protein 1 (IMPT1), organic cation transporter-like protein 2 (ORCTL2), or tumor-suppressing subchromosomal transferable fragment candidate gene 5 protein (TSSC5). It is localized at the apical membrane surface of renal proximal tubules and may act as an organic cation/proton antiporter. It functions as a tumor suppressor in several cancer types including glioblastoma and colorectal cancer. SLC22A18 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340889 [Multi-domain]  Cd Length: 382  Bit Score: 39.12  E-value: 5.31e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  90 AWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGfvMTVQPMYVGEIS 169
Cdd:cd17331  38 GYLQTTFSVLQLVGGPLFGRFGDLFGPRAALVLSFLSSALSYLLLAFASSVPMLFLSRLPSVFMHA--MQAAQMVVTDLT 115
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 170 TDNVR-GATGSLMQLFIVGGILyvyaiGPYVSyqalqwccIVVPVVFDlvfymmPESPYFFAGKGRKSEALKSLQFLRGQ 248
Cdd:cd17331 116 DPGERaAALGRLGLSYGIGMVV-----GSFLG--------GLLTKKFG------EQAAALVAAVGSLLSIVLVILLIPSN 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 249 SAEGVHDEMAEIQANVEEAMASKGTVMDLFKNAgnrralficAGLISFQQLSGINVVLFNS-QSIFASANTGLDPAIATI 327
Cdd:cd17331 177 TKSKREKEAKESASPPSVFNLKEILRLLRLPGV---------AFLLLVKLLSGLPIGMFQSmFSLVAMDFFGLTPEENGY 247
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 24644448 328 IIGCVQVGS----SALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFF 371
Cdd:cd17331 248 LMSYAGVLGmvvqGLLVGPLTKRFGERSLLKLSVALLAIGYLLLAFVT 295
PRK12307 PRK12307
MFS transporter;
84-195 5.77e-03

MFS transporter;


Pssm-ID: 237051 [Multi-domain]  Cd Length: 426  Bit Score: 39.14  E-value: 5.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   84 ITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPM 163
Cdd:PRK12307  50 LTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACAST 129
                         90       100       110
                 ....*....|....*....|....*....|...
gi 24644448  164 YVGEISTDNVRG-ATGSLMQLFIVGGILYVYAI 195
Cdd:PRK12307 130 YAVESWPKHLKSkASAFLVSGFGIGNIIAAYFM 162
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
90-247 7.38e-03

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 38.79  E-value: 7.38e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448   90 AWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVM----------- 158
Cdd:PRK11551  53 GWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALpnlialtseav 132
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  159 -------TVQPMYVGEistdNVRGATGSLMQLFIVGG-----ILYVYAIGPYvsyqalqwccIVVPvvfdLVFYMMPESP 226
Cdd:PRK11551 133 gprlrgtAVSLMYCGV----PFGGALASVIGVLAAGDaawrhIFYVGGVGPL----------LLVP----LLMRWLPESR 194
                        170       180
                 ....*....|....*....|.
gi 24644448  227 YFFAGKGRKSEALKSLQFLRG 247
Cdd:PRK11551 195 AFAQAAGAGKQRAPVLRALFG 215
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
91-188 7.80e-03

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 38.71  E-value: 7.80e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  91 WISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEIST 170
Cdd:cd17473 237 LALAIASLAGAIGALLFGRLKRRLGKRRLLAIGFALMALGFLLLALASGLWVVLLGAILAGLGFGLLLPTLNSWAMSLVP 316
                        90
                ....*....|....*...
gi 24644448 171 DNVRGATGSLMQLFIVGG 188
Cdd:cd17473 317 PELRGRAMGIVTSAFFLG 334
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
90-413 8.48e-03

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 38.73  E-value: 8.48e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  90 AWISSLIAVGALVAPFV---AGPMADRIGRKW------VLLS---SSLFFVLAF---GLNMVASeVWILYMSRLIQGFGV 154
Cdd:COG2211  46 ALVGLILLVARLWDAITdplIGALSDRTRTRWgrrrpwILIGaipLALSFVLLFtapDLSPTGK-LIYALVTYLLLGLAY 124
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 155 GFVMTVQPMYVGEISTD-NVRGATGSLMQLF-IVGGILYVYAIGPYVSY------QALQWCCIVVPVVFdLVFYMMPesp 226
Cdd:COG2211 125 TLVNIPYSALGAELTPDyEERTRLSSWRFAFaGLGGLLASVLPPPLVAAfggdaaLGYRLTALIFAVLG-LLAFLLT--- 200
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 227 yFFAGKGRKSEAlkslqflrgqsaegvhdemaeiqanveeamASKGTVMDLFKNAGNRRALFICAGLISFQQLSgiNVVL 306
Cdd:COG2211 201 -FFGTKERPVPE------------------------------EEKVSLKESLKALLKNRPFLLLLLAYLLFFLA--LALV 247
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448 307 FNSQSIFASANTGLDPAIATIIIGCVQVG---SSALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMQlvkgdissv 383
Cdd:COG2211 248 AALLLYYFKYVLGLSAALVGLLLALYFLAallGAPLWPRLAKRFGKKKAFIIGLLLAALGLLLLFFLGPGN--------- 318
                       330       340       350
                ....*....|....*....|....*....|
gi 24644448 384 VWMPVPALIIYNIVYcTGFGPLPWAVLGEM 413
Cdd:COG2211 319 LWLLLVLAALAGIGL-GAILVLPWAMLADV 347
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
89-175 8.96e-03

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 38.29  E-value: 8.96e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24644448  89 DAWISSLIAVGALV---APFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYV 165
Cdd:cd17370 233 AALIPLLYALFNLVyalAAYPAGRLSDRIGRKKLLILGYLSLALAYLGFALGSSLWLLLLGFILWGLYMGAQESIERAAV 312
                        90
                ....*....|
gi 24644448 166 GEISTDNVRG 175
Cdd:cd17370 313 ADLVPAELRG 322
PRK11043 PRK11043
Bcr/CflA family multidrug efflux MFS transporter;
108-154 9.83e-03

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182924 [Multi-domain]  Cd Length: 401  Bit Score: 38.33  E-value: 9.83e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 24644448  108 GPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGV 154
Cdd:PRK11043  62 GPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGV 108
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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