NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|25152834|ref|NP_741367|]
View 

Basic proline-rich protein [Caenorhabditis elegans]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PRK07764 super family cl35613
DNA polymerase III subunits gamma and tau; Validated
 319-507 2.97e-07

DNA polymerase III subunits gamma and tau; Validated


The actual alignment was detected with superfamily member PRK07764:

Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 53.45  E-value: 2.97e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834  319 GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPrGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESS 398
Cdd:PRK07764 589 GPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPA-GAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGD 667

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834  399 ESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQkRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESS 478
Cdd:PRK07764 668 GWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQ-ADDPAAQPPQAAQGASAPSPAADDPVPLPPEPD 746

                        170       180
                 ....*....|....*....|....*....
gi 25152834  479 ESREGPRGPRRSPPTGSPPTGSPPTGAPP 507
Cdd:PRK07764 747 DPPDPAGAPAQPPPPPAPAPAAAPAAAPP 775
 
Name Accession Description Interval E-value
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 319-507 2.97e-07

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 53.45  E-value: 2.97e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834  319 GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPrGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESS 398
Cdd:PRK07764 589 GPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPA-GAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGD 667

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834  399 ESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQkRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESS 478
Cdd:PRK07764 668 GWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQ-ADDPAAQPPQAAQGASAPSPAADDPVPLPPEPD 746

                        170       180
                 ....*....|....*....|....*....
gi 25152834  479 ESREGPRGPRRSPPTGSPPTGSPPTGAPP 507
Cdd:PRK07764 747 DPPDPAGAPAQPPPPPAPAPAAAPAAAPP 775
KAR9 pfam08580
Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal ...
 404-502 3.78e-03

Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules. KAR9 localizes at the shmoo tip in mating cells and at the tip of the growing bud in anaphase.


Pssm-ID: 430088 [Multi-domain]  Cd Length: 684  Bit Score: 39.81  E-value: 3.78e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834   404 PRGPRRSPPTGSPP----TGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGR-PHrggPGKSESS 478
Cdd:pfam08580 495 PRASPNHSGFLSTPsntaTSETPTPALRPPSRPQPPPPGNRPRWNASTNTNDLDVGHNFKPLTLTTPsPT---PSRSSRS 571

                          90       100
                  ....*....|....*....|....*
gi 25152834   479 ESREGPRGPRRSPPTGSP-PTGSPP 502
Cdd:pfam08580 572 SSTLPPVSPLSRDKSRSPaPTCRSV 596
 
Name Accession Description Interval E-value
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 319-507 2.97e-07

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 53.45  E-value: 2.97e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834  319 GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPrGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESS 398
Cdd:PRK07764 589 GPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPA-GAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGD 667

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834  399 ESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQkRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESS 478
Cdd:PRK07764 668 GWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQ-ADDPAAQPPQAAQGASAPSPAADDPVPLPPEPD 746

                        170       180
                 ....*....|....*....|....*....
gi 25152834  479 ESREGPRGPRRSPPTGSPPTGSPPTGAPP 507
Cdd:PRK07764 747 DPPDPAGAPAQPPPPPAPAPAAAPAAAPP 775
PHA03247 PHA03247
large tegument protein UL36; Provisional
 278-507 1.07e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 48.40  E-value: 1.07e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834   278 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 357
Cdd:PHA03247 2557 PAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAAN 2636

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834   358 RPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGS-------PPTGSPPTGRPPRGS 430
Cdd:PHA03247 2637 EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSltsladpPPPPPTPEPAPHALV 2716

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 25152834   431 PPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTgrphrggPGKSESSESREGPRGPRRSPPTGSPPTGSPPTGAPP 507
Cdd:PHA03247 2717 SATPLPPGPAAARQASPALPAAPAPPAVPAGPAT-------PGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRP 2786
PHA03247 PHA03247
large tegument protein UL36; Provisional
 348-507 4.55e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 46.47  E-value: 4.55e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834   348 SPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPP 427
Cdd:PHA03247 2545 SDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAP 2624

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834   428 RGSPPTGSP-PTGLPSRQKRQAPEDRPTGSPPtgSPPTGRPHRGGPGKSESSESREGPRGPRR---SPPTGS-------P 496
Cdd:PHA03247 2625 DPPPPSPSPaANEPDPHPPPTVPPPERPRDDP--APGRVSRPRRARRLGRAAQASSPPQRPRRraaRPTVGSltsladpP 2702

                         170
                  ....*....|.
gi 25152834   497 PTGSPPTGAPP 507
Cdd:PHA03247 2703 PPPPTPEPAPH 2713
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 410-507 1.94e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 44.21  E-value: 1.94e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834  410 SPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSESREGPRGPRR 489
Cdd:PRK07764 394 PAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAA 473

                         90
                 ....*....|....*...
gi 25152834  490 SPPTGSPPTGSPPTGAPP 507
Cdd:PRK07764 474 PEPTAAPAPAPPAAPAPA 491
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
311-509 6.47e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 42.56  E-value: 6.47e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834  311 SLPPPQAGGSPPPAGTGSPPPPPRqkrqAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGP 390
Cdd:PRK12323 362 AFRPGQSGGGAGPATAAAAPVAQP----APAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAAR 437

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834  391 RKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRP-PRGSPPTGSPPTGLPSRQKRQAP--EDRPTGSPPTGSPPTGRP 467
Cdd:PRK12323 438 QASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAaAAAAAPARAAPAAAPAPADDDPPpwEELPPEFASPAPAQPDAA 517

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 25152834  468 HRGGPGKSESSESREGPRGPRRSPPTGSPPTGSPPTGAPPKK 509
Cdd:PRK12323 518 PAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEP 559
PTZ00395 PTZ00395
Sec24-related protein; Provisional
 407-509 9.72e-04

Sec24-related protein; Provisional


Pssm-ID: 185594 [Multi-domain]  Cd Length: 1560  Bit Score: 41.98  E-value: 9.72e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834   407 PRRSPPTGSPPTGSPPTGRPPRGSPPTGSPP----------------TGLPSRQKRQAPE-----------DRPTGSPPT 459
Cdd:PTZ00395  423 GYNNAPNSNTPYNNPPNSNTPYSNPPNSNPPysnlpysntpysnaplSNAPPSSAKDHHSayhaayqhraaNQPAANLPT 502

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 25152834   460 GSPPTGRPHRGGPGKSESSESREGPRGprRSPPTGSPPTGSPPTGAPPKK 509
Cdd:PTZ00395  503 ANQPAANNFHGAAGNSVGNPFASRPFG--SAPYGGNAATTADPNGIAKRE 550
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 410-514 1.67e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 40.95  E-value: 1.67e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834  410 SPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPgksesseSREGPRGPRR 489
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHT-------PESAPKLTRA 434

                         90       100
                 ....*....|....*....|....*
gi 25152834  490 SPPTGSPPTGSPPtgAPPKKGFFAS 514
Cdd:PRK14950 435 AIPVDEKPKYTPP--APPKEEEKAL 457
PHA03247 PHA03247
large tegument protein UL36; Provisional
 297-514 1.85e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.08  E-value: 1.85e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834   297 PPPPPPPRGS------PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRG--GPGKSS 368
Cdd:PHA03247 2777 AGPPRRLTRPavaslsESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPslPLGGSV 2856

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834   369 EESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQA 448
Cdd:PHA03247 2857 APGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPP 2936

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 25152834   449 PEDRPTGSPPTGSPPTGRPHRGGPGKSESSESREGPRGPRRSPPTGSPPTGSPPTGAPPKKGFFAS 514
Cdd:PHA03247 2937 PRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
PHA03247 PHA03247
large tegument protein UL36; Provisional
 303-507 2.29e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.08  E-value: 2.29e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834   303 PRGSPPT----------------GSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGK 366
Cdd:PHA03247 2707 TPEPAPHalvsatplppgpaaarQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRP 2786

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834   367 SSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRqkR 446
Cdd:PHA03247 2787 AVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVR--R 2864

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 25152834   447 QAPEDRPTGSPPTGSPPTGRpHRGGPGKSESSESREGPRGPRRSPPTGSPPTGSPPTGAPP 507
Cdd:PHA03247 2865 RPPSRSPAAKPAAPARPPVR-RLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPP 2924
KAR9 pfam08580
Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal ...
 404-502 3.78e-03

Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules. KAR9 localizes at the shmoo tip in mating cells and at the tip of the growing bud in anaphase.


Pssm-ID: 430088 [Multi-domain]  Cd Length: 684  Bit Score: 39.81  E-value: 3.78e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834   404 PRGPRRSPPTGSPP----TGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGR-PHrggPGKSESS 478
Cdd:pfam08580 495 PRASPNHSGFLSTPsntaTSETPTPALRPPSRPQPPPPGNRPRWNASTNTNDLDVGHNFKPLTLTTPsPT---PSRSSRS 571

                          90       100
                  ....*....|....*....|....*
gi 25152834   479 ESREGPRGPRRSPPTGSP-PTGSPP 502
Cdd:pfam08580 572 SSTLPPVSPLSRDKSRSPaPTCRSV 596
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 405-507 6.73e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 39.31  E-value: 6.73e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834  405 RGPRRSP---PTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPtgSPPTGRPHRGGPGKSESSESR 481
Cdd:PRK14951 383 RPEAAAPaaaPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPA--AAPAAVALAPAPPAQAAPETV 460

                         90       100
                 ....*....|....*....|....*.
gi 25152834  482 EGPrgPRRSPPTGSPPTGSPPTGAPP 507
Cdd:PRK14951 461 AIP--VRVAPEPAVASAAPAPAAAPA 484
PHA03378 PHA03378
EBNA-3B; Provisional
 338-495 7.43e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 39.28  E-value: 7.43e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834  338 QAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESS------ESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSP 411
Cdd:PHA03378 695 QPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAapgrarPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAP 774

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834  412 PTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQK---RQAPEDRPTGSPPTGSPPTGRPHRGGPG-KSESSESREGPRGP 487
Cdd:PHA03378 775 TPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQlmpRAAPGQQGPTKQILRQLLTGGVKRGRPSlKKPAALERQAAAGP 854


                 ....*...
gi 25152834  488 RRSPPTGS 495
Cdd:PHA03378 855 TPSPGSGT 862
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 278-508 8.35e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 39.00  E-value: 8.35e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834   278 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPerSPPTGSPPTGSPPTG 357
Cdd:PHA03307  124 ASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAP--SSPPAEPPPSTPPAA 201

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25152834   358 RPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTgRPPRGSPPTGSPP 437
Cdd:PHA03307  202 ASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPT-RIWEASGWNGPSS 280

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 25152834   438 TGLPSRQKRQAPEDRPT------GSPPTGSPPTGRPHRGGPGKSESSESREGPRGPRRSPPTGSPPTGSPPTGAPPK 508
Cdd:PHA03307  281 RPGPASSSSSPRERSPSpspsspGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPP 357
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH