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Conserved domains on  [gi|161080260|ref|NP_788446|]
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methuselah-like 10, isoform B [Drosophila melanogaster]

Protein Classification

G protein-coupled receptor family protein; olfactory receptor subfamily 2A protein( domain architecture ID 12071473)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters| olfactory receptor (OR) subfamily 2A protein, such as human olfactory receptor 2A2 and related proteins in other mammals and sauropsids; ORs play a central role in olfaction, the sense of smell, and belong to the class A rhodopsin-like family of seven-transmembrane G protein-coupled receptors (7TM GPCRs)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmB3_Methuselah-like cd15039
Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G ...
242-533 7.95e-92

Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G protein-coupled receptors; The subfamily B3 of class B GPCRs consists of Methuselah (Mth) and its closely related proteins found in bilateria. Mth was originally identified in Drosophila as a GPCR affecting stress resistance and aging. In addition to the seven transmembrane helices, Mth contains an N-terminal extracellular domain involved in ligand binding, and a third intracellular loop (IC3) required for the specificity of G-protein coupling. Drosophila Mth mutants showed an increase in average lifespan by 35% and greater resistance to a variety of stress factors, including starvation, high temperature, and paraquat-induced oxidative toxicity. Moreover, mutations in two endogenous peptide ligands of Methuselah, Stunted A and B, showed an increased in lifespan and resistance to oxidative stress induced by dietary paraquat. These results strongly suggest that the Stunted-Methuselah system plays important roles in stress response and aging.


:

Pssm-ID: 410632 [Multi-domain]  Cd Length: 270  Bit Score: 283.35  E-value: 7.95e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 242 HSTVKIINSYAMMFSIPFMMLTIAVYLLIPELRNQHGKSLVCYLIGLSVGYSSLCYVQLYQVDATGVtCKVFGYTAYFFF 321
Cdd:cd15039    1 SSILGILTLIGLIISLVFLLLTLAVYALLPELRNLHGKCLMCLVLSLFVAYLLLLIGQLLSSGDSTL-CVALGILLHFFF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 322 MGAYMWLSVISFDLWHNFRGTRG-INRFQEKKRFLFYSLYSWGIALVFLAFTYCAQQLTNLpANLKPGIGDGvYCWLDmS 400
Cdd:cd15039   80 LAAFFWLNVMSFDIWRTFRGKRSsSSRSKERKRFLRYSLYAWGVPLLLVAVTIIVDFSPNT-DSLRPGYGEG-SCWIS-N 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 401 NWAAMIYFYGPILAIVVANTIMFIMTAIKIHGVQREMARIIASENSTKNlrtekdkrfyrawsnyRFGLFLRLFLIMGIT 480
Cdd:cd15039  157 PWALLLYFYGPVALLLLFNIILFILTAIRIRKVKKETAKVQSRLRSDKQ----------------RFRLYLKLFVIMGVT 220
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 161080260 481 WLTELISYFVGsdkGWSKLFYISDLANAMQGFLIFMLFVMKKKVKHLITNRCS 533
Cdd:cd15039  221 WILEIISWFVG---GSSVLWYIFDILNGLQGVFIFLIFVCKRRVLRLLKKKIR 270
Methuselah_N pfam06652
Methuselah N-terminus; This family represents the N-terminal region of the Drosophila specific ...
56-236 8.06e-84

Methuselah N-terminus; This family represents the N-terminal region of the Drosophila specific Methuselah protein. Drosophila Methuselah (Mth) mutants have a 35% increase in average lifespan and increased resistance to several forms of stress, including heat, starvation, and oxidative damage. The protein affected by this mutation is related to G protein-coupled receptors of the secretin receptor family. Mth, like secretin receptor family members, has a large N-terminal ectodomain, which may constitute the ligand binding site. This family is found in conjunction with pfam00002.


:

Pssm-ID: 429053  Cd Length: 179  Bit Score: 259.11  E-value: 8.06e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260   56 CNFYDTVNLTGHRLFPNGSYDYYGTIVPAELVGTYDYIHSSLTERIEVREHVRGCVCKFKSCLNICCPWRQVFNSEVDGC 135
Cdd:pfam06652   1 CDFFDTVNITGSQRLPNGSYLYEGLVIPAELTGEYDFRILEDGSRVPVPKHLRGCVCKLKPCIRFCCPHGQIYDNGEREC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260  136 IIDHSDNRTWPDpPMLNITFRNESTILVNMFTQFAIQSFRP--CPKMFSLQPETNNWdDYLLFENGSMLRVDDKLLIRKN 213
Cdd:pfam06652  81 SDDHEEELTWPD-PHLNVTLENGSVVEVHILTDFVVQRELPlpCDEMFSLDKEDNYW-QWTLFENGSLLRHFDRVHLSKQ 158
                         170       180
                  ....*....|....*....|...
gi 161080260  214 EFCMVPTYVNESDmfYTIHPANC 236
Cdd:pfam06652 159 EYCLQPLEFNDSD--IRLQPHNC 179
 
Name Accession Description Interval E-value
7tmB3_Methuselah-like cd15039
Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G ...
242-533 7.95e-92

Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G protein-coupled receptors; The subfamily B3 of class B GPCRs consists of Methuselah (Mth) and its closely related proteins found in bilateria. Mth was originally identified in Drosophila as a GPCR affecting stress resistance and aging. In addition to the seven transmembrane helices, Mth contains an N-terminal extracellular domain involved in ligand binding, and a third intracellular loop (IC3) required for the specificity of G-protein coupling. Drosophila Mth mutants showed an increase in average lifespan by 35% and greater resistance to a variety of stress factors, including starvation, high temperature, and paraquat-induced oxidative toxicity. Moreover, mutations in two endogenous peptide ligands of Methuselah, Stunted A and B, showed an increased in lifespan and resistance to oxidative stress induced by dietary paraquat. These results strongly suggest that the Stunted-Methuselah system plays important roles in stress response and aging.


Pssm-ID: 410632 [Multi-domain]  Cd Length: 270  Bit Score: 283.35  E-value: 7.95e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 242 HSTVKIINSYAMMFSIPFMMLTIAVYLLIPELRNQHGKSLVCYLIGLSVGYSSLCYVQLYQVDATGVtCKVFGYTAYFFF 321
Cdd:cd15039    1 SSILGILTLIGLIISLVFLLLTLAVYALLPELRNLHGKCLMCLVLSLFVAYLLLLIGQLLSSGDSTL-CVALGILLHFFF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 322 MGAYMWLSVISFDLWHNFRGTRG-INRFQEKKRFLFYSLYSWGIALVFLAFTYCAQQLTNLpANLKPGIGDGvYCWLDmS 400
Cdd:cd15039   80 LAAFFWLNVMSFDIWRTFRGKRSsSSRSKERKRFLRYSLYAWGVPLLLVAVTIIVDFSPNT-DSLRPGYGEG-SCWIS-N 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 401 NWAAMIYFYGPILAIVVANTIMFIMTAIKIHGVQREMARIIASENSTKNlrtekdkrfyrawsnyRFGLFLRLFLIMGIT 480
Cdd:cd15039  157 PWALLLYFYGPVALLLLFNIILFILTAIRIRKVKKETAKVQSRLRSDKQ----------------RFRLYLKLFVIMGVT 220
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 161080260 481 WLTELISYFVGsdkGWSKLFYISDLANAMQGFLIFMLFVMKKKVKHLITNRCS 533
Cdd:cd15039  221 WILEIISWFVG---GSSVLWYIFDILNGLQGVFIFLIFVCKRRVLRLLKKKIR 270
Methuselah_N pfam06652
Methuselah N-terminus; This family represents the N-terminal region of the Drosophila specific ...
56-236 8.06e-84

Methuselah N-terminus; This family represents the N-terminal region of the Drosophila specific Methuselah protein. Drosophila Methuselah (Mth) mutants have a 35% increase in average lifespan and increased resistance to several forms of stress, including heat, starvation, and oxidative damage. The protein affected by this mutation is related to G protein-coupled receptors of the secretin receptor family. Mth, like secretin receptor family members, has a large N-terminal ectodomain, which may constitute the ligand binding site. This family is found in conjunction with pfam00002.


Pssm-ID: 429053  Cd Length: 179  Bit Score: 259.11  E-value: 8.06e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260   56 CNFYDTVNLTGHRLFPNGSYDYYGTIVPAELVGTYDYIHSSLTERIEVREHVRGCVCKFKSCLNICCPWRQVFNSEVDGC 135
Cdd:pfam06652   1 CDFFDTVNITGSQRLPNGSYLYEGLVIPAELTGEYDFRILEDGSRVPVPKHLRGCVCKLKPCIRFCCPHGQIYDNGEREC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260  136 IIDHSDNRTWPDpPMLNITFRNESTILVNMFTQFAIQSFRP--CPKMFSLQPETNNWdDYLLFENGSMLRVDDKLLIRKN 213
Cdd:pfam06652  81 SDDHEEELTWPD-PHLNVTLENGSVVEVHILTDFVVQRELPlpCDEMFSLDKEDNYW-QWTLFENGSLLRHFDRVHLSKQ 158
                         170       180
                  ....*....|....*....|...
gi 161080260  214 EFCMVPTYVNESDmfYTIHPANC 236
Cdd:pfam06652 159 EYCLQPLEFNDSD--IRLQPHNC 179
Mth_Ecto cd00251
The ectodomain of Methuselah (Mth); Mth mutants have a 35% increase in average lifespan and ...
56-236 2.74e-60

The ectodomain of Methuselah (Mth); Mth mutants have a 35% increase in average lifespan and increased resistance to several forms of stress, including heat, starvation, and oxidative damage; The protein affected by this mutation is related to G protein-coupled receptors of the secretin receptor family; Mth, like secretin receptor family members, has a large N-terminal ectodomain, which may constitute the ligand binding site.


Pssm-ID: 119403  Cd Length: 176  Bit Score: 197.90  E-value: 2.74e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260  56 CNFYDTVNLTGHRLFPNGSYDYYGTIVPAELVGTYDYIHSSLTERIEVREHVRGCVCKFKSCLNICCPWRQVFNSEVdgC 135
Cdd:cd00251    1 CDFFDTVNITGSQRFPNGSYLYEGIIIPAHLTGEYDYVILPDGSREPVPEHLRGCVCKLKPCIRFCCPHGKIMDNGQ--C 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 136 IIDHSDNRTWpdPPMLNITFRNESTILVNMFTQFAIQSF--RPCPKMFSLQPEtNNWDDYLLFENGSMLRVDDKLLIRKN 213
Cdd:cd00251   79 SDTVQEELRY--DPYVNITLADGSVDLRHVLTEFIVQGDlpLPCESMYELDRE-NEFDEWTLFENGTLLRHYDSRLLSKQ 155
                        170       180
                 ....*....|....*....|...
gi 161080260 214 EFCMVPTYVNESDmfYTIHPANC 236
Cdd:cd00251  156 EYCLQPRNFNNES--IELVPHNC 176
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
302-514 2.49e-09

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 58.06  E-value: 2.49e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260  302 QVDATGVTCKVFGYTAYFFFMGAYMWLSVISFDLwHNFRGtrgINRFQEKKRFLFYSLYSWGIALVFLAftycaqqltnL 381
Cdd:pfam00002  67 LDHCSWVGCKVVAVFLHYFFLANFFWMLVEGLYL-YTLLV---EVFFSERKYFWWYLLIGWGVPALVVG----------I 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260  382 PANLKP-GIGDGVYCWLDMSN---WAamiyFYGPILAIVVANTIMFIMTaikihgvqremARIIASENSTKNLRtEKDKR 457
Cdd:pfam00002 133 WAGVDPkGYGEDDGCWLSNENglwWI----IRGPILLIILVNFIIFINI-----------VRILVQKLRETNMG-KSDLK 196
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 161080260  458 FYRAWSnyrFGLFLRLFLiMGITWLTELIsYFVGSDKGWSKLFYISDLANAMQGFLI 514
Cdd:pfam00002 197 QYRRLA---KSTLLLLPL-LGITWVFGLF-AFNPENTLRVVFLYLFLILNSFQGFFV 248
 
Name Accession Description Interval E-value
7tmB3_Methuselah-like cd15039
Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G ...
242-533 7.95e-92

Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G protein-coupled receptors; The subfamily B3 of class B GPCRs consists of Methuselah (Mth) and its closely related proteins found in bilateria. Mth was originally identified in Drosophila as a GPCR affecting stress resistance and aging. In addition to the seven transmembrane helices, Mth contains an N-terminal extracellular domain involved in ligand binding, and a third intracellular loop (IC3) required for the specificity of G-protein coupling. Drosophila Mth mutants showed an increase in average lifespan by 35% and greater resistance to a variety of stress factors, including starvation, high temperature, and paraquat-induced oxidative toxicity. Moreover, mutations in two endogenous peptide ligands of Methuselah, Stunted A and B, showed an increased in lifespan and resistance to oxidative stress induced by dietary paraquat. These results strongly suggest that the Stunted-Methuselah system plays important roles in stress response and aging.


Pssm-ID: 410632 [Multi-domain]  Cd Length: 270  Bit Score: 283.35  E-value: 7.95e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 242 HSTVKIINSYAMMFSIPFMMLTIAVYLLIPELRNQHGKSLVCYLIGLSVGYSSLCYVQLYQVDATGVtCKVFGYTAYFFF 321
Cdd:cd15039    1 SSILGILTLIGLIISLVFLLLTLAVYALLPELRNLHGKCLMCLVLSLFVAYLLLLIGQLLSSGDSTL-CVALGILLHFFF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 322 MGAYMWLSVISFDLWHNFRGTRG-INRFQEKKRFLFYSLYSWGIALVFLAFTYCAQQLTNLpANLKPGIGDGvYCWLDmS 400
Cdd:cd15039   80 LAAFFWLNVMSFDIWRTFRGKRSsSSRSKERKRFLRYSLYAWGVPLLLVAVTIIVDFSPNT-DSLRPGYGEG-SCWIS-N 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 401 NWAAMIYFYGPILAIVVANTIMFIMTAIKIHGVQREMARIIASENSTKNlrtekdkrfyrawsnyRFGLFLRLFLIMGIT 480
Cdd:cd15039  157 PWALLLYFYGPVALLLLFNIILFILTAIRIRKVKKETAKVQSRLRSDKQ----------------RFRLYLKLFVIMGVT 220
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 161080260 481 WLTELISYFVGsdkGWSKLFYISDLANAMQGFLIFMLFVMKKKVKHLITNRCS 533
Cdd:cd15039  221 WILEIISWFVG---GSSVLWYIFDILNGLQGVFIFLIFVCKRRVLRLLKKKIR 270
Methuselah_N pfam06652
Methuselah N-terminus; This family represents the N-terminal region of the Drosophila specific ...
56-236 8.06e-84

Methuselah N-terminus; This family represents the N-terminal region of the Drosophila specific Methuselah protein. Drosophila Methuselah (Mth) mutants have a 35% increase in average lifespan and increased resistance to several forms of stress, including heat, starvation, and oxidative damage. The protein affected by this mutation is related to G protein-coupled receptors of the secretin receptor family. Mth, like secretin receptor family members, has a large N-terminal ectodomain, which may constitute the ligand binding site. This family is found in conjunction with pfam00002.


Pssm-ID: 429053  Cd Length: 179  Bit Score: 259.11  E-value: 8.06e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260   56 CNFYDTVNLTGHRLFPNGSYDYYGTIVPAELVGTYDYIHSSLTERIEVREHVRGCVCKFKSCLNICCPWRQVFNSEVDGC 135
Cdd:pfam06652   1 CDFFDTVNITGSQRLPNGSYLYEGLVIPAELTGEYDFRILEDGSRVPVPKHLRGCVCKLKPCIRFCCPHGQIYDNGEREC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260  136 IIDHSDNRTWPDpPMLNITFRNESTILVNMFTQFAIQSFRP--CPKMFSLQPETNNWdDYLLFENGSMLRVDDKLLIRKN 213
Cdd:pfam06652  81 SDDHEEELTWPD-PHLNVTLENGSVVEVHILTDFVVQRELPlpCDEMFSLDKEDNYW-QWTLFENGSLLRHFDRVHLSKQ 158
                         170       180
                  ....*....|....*....|...
gi 161080260  214 EFCMVPTYVNESDmfYTIHPANC 236
Cdd:pfam06652 159 EYCLQPLEFNDSD--IRLQPHNC 179
7tm_classB cd13952
class B family of seven-transmembrane G protein-coupled receptors; The class B of ...
242-528 2.58e-66

class B family of seven-transmembrane G protein-coupled receptors; The class B of seven-transmembrane GPCRs is classified into three major subfamilies: subfamily B1 (secretin-like receptor family), B2 (adhesion family), and B3 (Methuselah-like family). The class B receptors have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi or prokaryotes. The B1 subfamily comprises receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the subfamily B1 receptors preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The subfamily B2 consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Furthermore, the subfamily B3 includes Methuselah (Mth) protein, which was originally identified in Drosophila as a GPCR affecting stress resistance and aging, and its closely related proteins.


Pssm-ID: 410627 [Multi-domain]  Cd Length: 260  Bit Score: 216.69  E-value: 2.58e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 242 HSTVKIINSYAMMFSIPFMMLTIAVYLLIPELRNQHGKSLVCYLIGLSVGYSSLCYVQLYQVDATGVTCKVFGYTAYFFF 321
Cdd:cd13952    1 DLALSIITYIGCSLSLVGLLLTIITYLLFPKLRNLRGKILINLCLSLLLAQLLFLIGQLLTSSDRPVLCKALAILLHYFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 322 MGAYMWLSVISFDLWHNFRGTRGINrfqEKKRFLFYSLYSWGIALVFLAFTYCAQQLTNLPanlKPGIGDGvYCWLDmSN 401
Cdd:cd13952   81 LASFFWMLVEAFDLYRTFVKVFGSS---ERRRFLKYSLYGWGLPLLIVIITAIVDFSLYGP---SPGYGGE-YCWLS-NG 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 402 WAAMIYFYGPILAIVVANTIMFIMTAIKIHGVQREmariiasenSTKNLRTEKDKRfyrawsnyRFGLFLRLFLIMGITW 481
Cdd:cd13952  153 NALLWAFYGPVLLILLVNLVFFILTVRILLRKLRE---------TPKQSERKSDRK--------QLRAYLKLFPLMGLTW 215
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 161080260 482 LTELISYFVGsdkGWSKLFYISDLANAMQGFLIFMLFV-MKKKVKHLI 528
Cdd:cd13952  216 IFGILAPFVG---GSLVFWYLFDILNSLQGFFIFLIFClKNKEVRRLL 260
Mth_Ecto cd00251
The ectodomain of Methuselah (Mth); Mth mutants have a 35% increase in average lifespan and ...
56-236 2.74e-60

The ectodomain of Methuselah (Mth); Mth mutants have a 35% increase in average lifespan and increased resistance to several forms of stress, including heat, starvation, and oxidative damage; The protein affected by this mutation is related to G protein-coupled receptors of the secretin receptor family; Mth, like secretin receptor family members, has a large N-terminal ectodomain, which may constitute the ligand binding site.


Pssm-ID: 119403  Cd Length: 176  Bit Score: 197.90  E-value: 2.74e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260  56 CNFYDTVNLTGHRLFPNGSYDYYGTIVPAELVGTYDYIHSSLTERIEVREHVRGCVCKFKSCLNICCPWRQVFNSEVdgC 135
Cdd:cd00251    1 CDFFDTVNITGSQRFPNGSYLYEGIIIPAHLTGEYDYVILPDGSREPVPEHLRGCVCKLKPCIRFCCPHGKIMDNGQ--C 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 136 IIDHSDNRTWpdPPMLNITFRNESTILVNMFTQFAIQSF--RPCPKMFSLQPEtNNWDDYLLFENGSMLRVDDKLLIRKN 213
Cdd:cd00251   79 SDTVQEELRY--DPYVNITLADGSVDLRHVLTEFIVQGDlpLPCESMYELDRE-NEFDEWTLFENGTLLRHYDSRLLSKQ 155
                        170       180
                 ....*....|....*....|...
gi 161080260 214 EFCMVPTYVNESDmfYTIHPANC 236
Cdd:cd00251  156 EYCLQPRNFNNES--IELVPHNC 176
7tmB2_Adhesion cd15040
adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G ...
255-527 4.12e-26

adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G protein-coupled receptors; The B2 subfamily of class B GPCRs consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320168 [Multi-domain]  Cd Length: 253  Bit Score: 107.27  E-value: 4.12e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 255 FSIPFMMLTIAVYLLIPELRNQHGKSLVCYLiGLSVGYSSLCYVQLYQVDATGVTCKVFGYTAYFFFMGAYMWLSVISFD 334
Cdd:cd15040   14 LSLLGLLLTIITYILFRKLRKRKPTKILLNL-CLALLLANLLFLFGINSTDNPVLCTAVAALLHYFLLASFMWMLVEALL 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 335 LWHNFRGTRGINRfqeKKRFLFYSLYSWGIALVFLAFTycaqqLTNLPANlkpGIGDGVYCWLdmSNWAAMIY-FYGPIL 413
Cdd:cd15040   93 LYLRLVKVFGTYP---RHFILKYALIGWGLPLIIVIIT-----LAVDPDS---YGNSSGYCWL--SNGNGLYYaFLGPVL 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 414 AIVVANTIMFIMTAIKIHGVQRemariiasenstkNLRTEKDKRFYRawsnyRFGLFLRLFLIMGITWLTELISYFvGSD 493
Cdd:cd15040  160 LIILVNLVIFVLVLRKLLRLSA-------------KRNKKKRKKTKA-----QLRAAVSLFFLLGLTWIFGILAIF-GAR 220
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 161080260 494 KGWSKLFYIsdlANAMQGFLIFMLF-VMKKKVKHL 527
Cdd:cd15040  221 VVFQYLFAI---FNSLQGFFIFIFHcLRNKEVRKA 252
7tmB2_CELSR_Adhesion_IV cd15441
cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 ...
244-532 1.89e-12

cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuron migration and axon guidance in the CNS.


Pssm-ID: 320557 [Multi-domain]  Cd Length: 254  Bit Score: 67.66  E-value: 1.89e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 244 TVKIINSYAMMFSIPFMMLTIAVYLLIPELR-NQHG--KSLV-CYLIGLSvgyssLCYVQLYQVDaTGVTCKVFGYTAYF 319
Cdd:cd15441    3 LLKIVTYIGIGISLVLLVIAFLVLSCLRGLQsNSNSihKNLVaCLLLAEL-----LFLLGINQTE-NLFPCKLIAILLHY 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 320 FFMGAYMWLSVISFDLWHNFRGTRGINRFQEKkrflFYSLYSWGIALVFLAftycaqqltnLPANLKP-GIGDGVYCWLD 398
Cdd:cd15441   77 FYLSAFSWLLVESLHLYRMLTEPRDINHGHMR----FYYLLGYGIPAIIVG----------LSVGLRPdGYGNPDFCWLS 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 399 MSN---WAamiyFYGPILAIVVANTIMFIMTAIKIHGVQREMARIiasenstknlrtekdkrfyrawSNYRFGLFLRLFL 475
Cdd:cd15441  143 VNEtliWS----FAGPIAFVIVITLIIFILALRASCTLKRHVLEK----------------------ASVRTDLRSSFLL 196
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 476 --IMGITWLTELISyfVGSDKgwSKLFYISDLANAMQGFLIFMLFVM-KKKVKHLITNRC 532
Cdd:cd15441  197 lpLLGATWVFGLLA--VNEDS--ELLHYLFAGLNFLQGLFIFLFYCIfNKKVRRELKNAL 252
7tmB2_GPR133-like_Adhesion_V cd15933
orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of ...
255-538 1.47e-10

orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group V adhesion GPCRs include orphan receptors GPR133, GPR144, and closely related proteins. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the G(s) protein, leading to activation of adenylate cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320599 [Multi-domain]  Cd Length: 252  Bit Score: 61.96  E-value: 1.47e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 255 FSIPFMMLTIAVYLLIPELRNQ----HgkslvCYLIgLSVGYSSLCYVQLYQVDATGVTCKVFGYTAYFFFMGAYMWLSV 330
Cdd:cd15933   14 ISIACLALTLIIFLVLRVLSSDrfqiH-----KNLC-VALLLAQILLLAGEWAEGNKVACKVVAILLHFFFMAAFSWMLV 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 331 ISFDLWHNFrgtrgINRFQEKKRFLFYSLYSWGIALVFLAFTYCAQQLtnlpanlkpGIGDGVYCWLDMSN---WAamiy 407
Cdd:cd15933   88 EGLHLYLMI-----VKVFNYKSKMRYYYFIGWGLPAIIVAISLAILFD---------DYGSPNVCWLSLDDgliWA---- 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 408 FYGPILAIVVANTIMFIMtaikihgVQREMAriiaseNSTKNLRTEKDKRFYRAWSNYRFGLFlrLFLIMGITWLTELIS 487
Cdd:cd15933  150 FVGPVIFIITVNTVILIL-------VVKITV------SLSTNDAKKSQGTLAQIKSTAKASVV--LLPILGLTWLFGVLV 214
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 161080260 488 yFVGSDKGWSKLFYISdlaNAMQGFLIFMLfvmkkkvkHLITNrcSSVRDG 538
Cdd:cd15933  215 -VNSQTIVFQYIFVIL---NSLQGLMIFLF--------HCVLN--SEVRSA 251
7tmB2_latrophilin-like_invertebrate cd15440
invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane ...
308-532 3.16e-10

invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; This subgroup includes latrophilin-like proteins that are found in invertebrates such as insects and worms. Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of vertebrate latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320556 [Multi-domain]  Cd Length: 259  Bit Score: 61.12  E-value: 3.16e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 308 VTCKVFGYTAYFFFMGAYMWLSVISFDLWHNFrgtrgINRFQ-EKKRFLFYSLYSWGIALVFLAFTYCAqqltnlpanlK 386
Cdd:cd15440   65 TLCGVIAGLLHYFFLAAFSWMLLEGFQLYVML-----VEVFEpEKSRIKWYYLFGYGLPALIVAVSAGV----------D 129
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 387 P-GIGDGVYCWLDMSNWaaMIY-FYGPILAIVVANtIMFIMTAIKIhgvqreMARiiasenSTKNLRTEKDKRFYRAWSN 464
Cdd:cd15440  130 PtGYGTEDHCWLSTENG--FIWsFVGPVIVVLLAN-LVFLGMAIYV------MCR------HSSRSASKKDASKLKNIRG 194
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 161080260 465 YRFGLFLRLFLiMGITWLTELIsyFVgsDKGWSKLFYISDLANAMQGFLIFMLF-VMKKKVKHLITNRC 532
Cdd:cd15440  195 WLKGSIVLVVL-LGLTWTFGLL--FI--NQESIVMAYIFTILNSLQGLFIFIFHcVLNEKVRKELRRWL 258
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
302-514 2.49e-09

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 58.06  E-value: 2.49e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260  302 QVDATGVTCKVFGYTAYFFFMGAYMWLSVISFDLwHNFRGtrgINRFQEKKRFLFYSLYSWGIALVFLAftycaqqltnL 381
Cdd:pfam00002  67 LDHCSWVGCKVVAVFLHYFFLANFFWMLVEGLYL-YTLLV---EVFFSERKYFWWYLLIGWGVPALVVG----------I 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260  382 PANLKP-GIGDGVYCWLDMSN---WAamiyFYGPILAIVVANTIMFIMTaikihgvqremARIIASENSTKNLRtEKDKR 457
Cdd:pfam00002 133 WAGVDPkGYGEDDGCWLSNENglwWI----IRGPILLIILVNFIIFINI-----------VRILVQKLRETNMG-KSDLK 196
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 161080260  458 FYRAWSnyrFGLFLRLFLiMGITWLTELIsYFVGSDKGWSKLFYISDLANAMQGFLI 514
Cdd:pfam00002 197 QYRRLA---KSTLLLLPL-LGITWVFGLF-AFNPENTLRVVFLYLFLILNSFQGFFV 248
7tmB2_GPR128 cd15257
orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G ...
310-524 4.35e-08

orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR128 is an orphan receptor of the adhesion family (subclass B2) that belongs to the class B GPCRs. Expression of GPR128 was detected in the mouse intestinal mucosa and is thought to be involved in energy balance, as its knockout mice showed a decrease in body weight gain and an increase in intestinal contraction frequency compared to wild-type controls. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320385 [Multi-domain]  Cd Length: 303  Bit Score: 54.88  E-value: 4.35e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 310 CKVFGYTAYFFFMGAYMWLSVISFDLWHNFRGTrginrFQEKKRF--LFYSLYSWGIALVFLAFTYCA--QQLTNLPAnL 385
Cdd:cd15257   93 CTAVAALLHYFLLVTFMWNAVYSAQLYLLLIRM-----MKPLPEMfiLQASAIGWGIPAVVVAITLGAtyRFPTSLPV-F 166
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 386 KPGIGDGVYCWL-----DMSNWAAMIY-FYGPILAIVVANTIMFIMTAIKihgvqremarIIASENstKNLRTEKDKRFY 459
Cdd:cd15257  167 TRTYRQEEFCWLaaldkNFDIKKPLLWgFLLPVGLILITNVILFIMTSQK----------VLKKNN--KKLTTKKRSYMK 234
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 161080260 460 RAWSNyrfglfLRLFLIMGITWLTeliSYFVGSDKGWSKLF--YISDLANAMQGFLIFMLFVMKKKV 524
Cdd:cd15257  235 KIYIT------VSVAVVFGITWIL---GYLMLVNNDLSKLVfsYIFCITNTTQGVQIFILYTWRTPE 292
7tmB2_CELSR1 cd15991
Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of ...
245-527 3.19e-07

Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320657 [Multi-domain]  Cd Length: 254  Bit Score: 51.77  E-value: 3.19e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 245 VKIINSYAMMFSIPFMMLTIAVYLLIPELR-NQHG--KSLVCYLIglsvgYSSLCYVQLYQVDATGVTCKVFGYTAYFFF 321
Cdd:cd15991    4 LKIITYTTVSLSLVALLITFILLVLIRTLRsNLHSihKNLVAALF-----FSELIFLIGINQTENPFVCTVVAILLHYFY 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 322 MGAYMWLSVISFDLWHNFRGTRGINRFQEKkrflFYSLYSWGIALVflaftycaqqLTNLPANLKP-GIGDGVYCWLDMS 400
Cdd:cd15991   79 MSTFAWMFVEGLHIYRMLTEVRNINTGHMR----FYYVVGWGIPAI----------ITGLAVGLDPqGYGNPDFCWLSVQ 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 401 NwaAMIY-FYGPILAIVVANTIMFIMtAIKIHGVQREmaRIIASENSTKNLRTEkdkrfyrawsnyrfglFLRLFLIMGi 479
Cdd:cd15991  145 D--TLIWsFAGPIGIVVIINTVIFVL-AAKASCGRRQ--RYFEKSGVISMLRTA----------------FLLLLLISA- 202
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 161080260 480 TWLTELISyfVGSDKgwSKLFYISDLANAMQGFLIFMLF-VMKKKV-KHL 527
Cdd:cd15991  203 TWLLGLMA--VNSDT--LSFHYLFAIFSCLQGIFIFFFHcIFNKEVrKHL 248
7tmB2_GPR144 cd15255
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
308-518 1.61e-06

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR144 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR133. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320383 [Multi-domain]  Cd Length: 263  Bit Score: 49.85  E-value: 1.61e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 308 VTCKVFGYTAYFFFMGAYMWLSVISFDLWhnfRGTRGINrFQEKKRFLFYSLYSWGIALVFLAFTycaqqltnLPANLKP 387
Cdd:cd15255   65 VACWAVTALLHLFFLAAFSWMLVEGLLLW---SKVVAVN-MSEDRRMKFYYVTGWGLPVVIVAVT--------LATSFNK 132
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 388 GIGDGvYCWLDMSN---WAamiyFYGPILAIVVANT-IMFIMTAIKIHGVQREMARIIASENSTKNLRTEkdkrfyrAWS 463
Cdd:cd15255  133 YVADQ-HCWLNVQTdiiWA----FVGPVLFVLTVNTfVLFRVVMVTVSSARRRAKMLTPSSDLEKQIGIQ-------IWA 200
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 161080260 464 NYRfgLFLRLFLIMGITWLTELIsyfVGSDKGWSKLFYIsdlANAMQGFLIFMLF 518
Cdd:cd15255  201 TAK--PVLVLLPVLGLTWLCGVL---VHLSDVWAYVFIT---LNSFQGLYIFLVY 247
7tmB2_GPR133 cd15256
orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G ...
243-517 1.65e-06

orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR133 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR144. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320384 [Multi-domain]  Cd Length: 260  Bit Score: 49.92  E-value: 1.65e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 243 STVKIINSYAMMFSIPFMMLTIAVYLLIPELRNQHgkslvcYLIGLSVGYSSLCYVQL----YQVDATGVTCKVFGYTAY 318
Cdd:cd15256    5 SSITYVGCSLSIFCLAITLVTFAVLSSVSTIRNQR------YHIHANLSFAVLVAQILllisFRFEPGTLPCKIMAILLH 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 319 FFFMGAYMWLSVISFDLWHNFRGTRGInrfQEKKRFLFYSLySWGIALVFlaftyCAQQLTNLPANLkpgiGDGVYCWLD 398
Cdd:cd15256   79 FFFLSAFAWMLVEGLHLYSMVIKVFGS---EESKHFYYYGI-GWGSPLLI-----CIISLTSALDSY----GESDNCWLS 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 399 MSNwAAMIYFYGPILAIVVANTIMFImtaikihGVQREMARIiasenSTKNLRTEKDKRFYRAWSNyrfgLFLRLFLIMG 478
Cdd:cd15256  146 LEN-GAIWAFVAPALFVIVVNIGILI-------AVTRVISRI-----SADNYKVHGDANAFKLTAK----AVAVLLPILG 208
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 161080260 479 ITWLTELISYfvgsdKGWSKLF-YISDLANAMQGFLIFML 517
Cdd:cd15256  209 SSWVFGVLAV-----NTHALVFqYMFAIFNSLQGFFIFLF 243
7tmB2_CELSR3 cd15993
Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of ...
244-427 2.61e-06

Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuronal migration and axon guidance in the CNS. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320659 [Multi-domain]  Cd Length: 254  Bit Score: 49.07  E-value: 2.61e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 244 TVKIINSYAMMFSIPFMMLTIAVYLLIPELR-NQHGkslVCYLIGLSVGYSSLCYVQLYQVDATGVTCKVFGYTAYFFFM 322
Cdd:cd15993    3 TLAIVTYSSVSASLAALVLTFSVLTCLRGLKsNTRG---IHSNIAAALFLSELLFLLGINRTENQFLCTVVAILLHYFFL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 323 GAYMWLSVISFDLWHNFRGTRGINRFQEKkrflFYSLYSWGIALVflaftycaqqLTNLPANLKP-GIGDGVYCWLDMSN 401
Cdd:cd15993   80 STFAWLFVQGLHIYRMQTEARNVNFGAMR----FYYAIGWGVPAI----------ITGLAVGLDPeGYGNPDFCWISIHD 145
                        170       180
                 ....*....|....*....|....*.
gi 161080260 402 wAAMIYFYGPILAIVVANTIMFIMTA 427
Cdd:cd15993  146 -KLVWSFAGPIVVVIVMNGVMFLLVA 170
7tmB2_EMR_Adhesion_II cd15931
EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of ...
247-525 1.05e-05

EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. On the other hand, EMR2 generates four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320597 [Multi-domain]  Cd Length: 262  Bit Score: 47.51  E-value: 1.05e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 247 IINSYAMMFSIPFMMLTIAVYLLIPELRNQHGKSLVCYLIGLSVGYSSLcyvqLYQVDATG--VTCKVFGYTAYFFFMGA 324
Cdd:cd15931    6 WINRVGVIVSLFCLGLAIFTFLLCRWIPKINTTAHLHLCLCLSMSHTLF----LAGIEYVEneLACTVMAGLLHYLFLAS 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 325 YMWLSVISFDLWHNFRGTRGINRFQEK--KRFLFYsLYSWGIALVFLAFTYCAQqltnlpanlKPGIGDGVYCWLDMS-- 400
Cdd:cd15931   82 FVWMLLEALQLHLLVRRLTKVQVIQRDglPRPLLC-LIGYGVPFLIVGVSALVY---------SDGYGEAKMCWLSQErg 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 401 -NWAamiyFYGPILAIVVANTIMFIMTAIKIHGVQREMariiasensTKNLRTEKDKRFyrawsnYRFGLFLRLFlIMGI 479
Cdd:cd15931  152 fNWS----FLGPVIAIIGINWILFCATLWCLRQTLSNM---------NSDISQLKDTRL------LTFKAVAQLF-ILGC 211
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 161080260 480 TWLTELisYFVGSDKGWskLFYISDLANAMQGFLIFMLF-VMKKKVK 525
Cdd:cd15931  212 TWVLGL--FQTNPVALV--FQYLFTILNSLQGAFLFLVHcLLNKEVR 254
7tmB2_CD97 cd15438
CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
308-525 1.26e-04

CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320554 [Multi-domain]  Cd Length: 261  Bit Score: 43.98  E-value: 1.26e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 308 VTCKVFGYTAYFFFMGAYMWLSVISFDLWhnFRGTRGINRFQEKKRFLFysLYSWGIALVFLAFTycaqqltnlPANLKP 387
Cdd:cd15438   65 VACAVVAGLLHYFFLAAFCWMSLEGVELY--LMVVQVFNTQSLKKRYLL--LIGYGVPLVIVAIS---------AAVNSK 131
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 388 GIGDGVYCWLDMSN---WAamiyFYGPILAIVVANTIMFIMTAIKIhgvqremariiASENSTKNLRTEKDKRFyRAWSn 464
Cdd:cd15438  132 GYGTQRHCWLSLERgflWS----FLGPVCLIILVNAIIFVITVWKL-----------AEKFSSINPDMEKLRKI-RALT- 194
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 161080260 465 yrFGLFLRLFlIMGITWLTELISYfvgsDKGWSKLFYISDLANAMQGFLIFMLF-VMKKKVK 525
Cdd:cd15438  195 --ITAIAQLC-ILGCTWIFGFFQF----SDSTLVMSYLFTILNSLQGLFIFLLHcLLSKQVR 249
7tmB2_Latrophilin_Adhesion_I cd15252
Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of ...
308-525 2.60e-04

Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; Group I adhesion GPCRs consist of latrophilins (also called lectomedins or latrotoxin receptors) and ETL (EGF-TM7-latrophilin-related protein. These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320380 [Multi-domain]  Cd Length: 257  Bit Score: 42.88  E-value: 2.60e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 308 VTCKVFGYTAYFFFMGAYMWLSVISFDLWHNFRGTrginRFQEKKRFLFYSLYSWGIALVFLAFTycaqqltnlpANLKP 387
Cdd:cd15252   65 IFCSVIAGLLHYFFLAAFAWMFIEGIQLYLMLVEV----FENEGSRHKNFYIFGYGSPAVIVGVS----------AALGY 130
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 388 -GIGDGVYCWLDMSNWaaMIY-FYGPILAIVVANTIMFimtAIKIHGVQREMARIIASENSTKNLrtekdkrfyRAWSNy 465
Cdd:cd15252  131 rYYGTTKVCWLSTENY--FIWsFIGPATLIILLNLIFL---GVAIYKMFRHTAGLKPEVSCLENI---------RSWAR- 195
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 161080260 466 rfGLFLRLFLiMGITWLTELIsYFVGSDKGWSKLFYISdlaNAMQGFLIFMLF-VMKKKVK 525
Cdd:cd15252  196 --GAIALLFL-LGLTWIFGVL-HINHASVVMAYLFTVS---NSLQGMFIFLFHcVLSRKVR 249
7tmB2_EMR cd15439
epidermal growth factor-like module-containing mucin-like hormone receptors, member of the ...
300-516 3.04e-04

epidermal growth factor-like module-containing mucin-like hormone receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4) and the leukocyte cell-surface antigen CD97, are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying number of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of EMR2, alternative splicing results in four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320555 [Multi-domain]  Cd Length: 263  Bit Score: 42.71  E-value: 3.04e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 300 LYQVDATG--VTCKVFGYTAYFFFMGAYMWLSVISFDLWHNFRGTRGINRFQEKK-RFLFYSLYSWGIALVFLAFTycaq 376
Cdd:cd15439   55 LVGIDRTDnkVLCSIIAGFLHYLFLACFAWMFLEAVHLFLTVRNLKVVNYFSSHRfKKRFMYPVGYGLPAVIVAIS---- 130
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 377 qltnlpANLKP-GIGDGVYCWLDMSN---WAamiyFYGPILAIVVANTIMFIMTAIKIHgvqremaRIIASENstKNLRT 452
Cdd:cd15439  131 ------AAVNPqGYGTPKHCWLSMEKgfiWS----FLGPVCVIIVINLVLFCLTLWILR-------EKLSSLN--AEVST 191
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 161080260 453 EKDKRFYRawsnyrFGLFLRLFlIMGITWLTELISYfvgsDKGWSKLFYISDLANAMQGFLIFM 516
Cdd:cd15439  192 LKNTRLLT------FKAIAQLF-ILGCTWILGLFQV----GPVATVMAYLFTITNSLQGVFIFL 244
7tmB2_GPR116-like_Adhesion_VI cd15932
orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of ...
394-528 7.39e-04

orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group VI adhesion GPCRs consist of orphan receptors GPR110, GPR111, GPR113, GPR115, GPR116, and closely related proteins. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR110 possesses a SEA box in the N-terminal has been identified as an oncogene over-expressed in lung and prostate cancer. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain. GPR112 has extremely long N-terminus (about 2,400 amino acids) containing a number of Ser/Thr-rich glycosylation sites and a pentraxin (PTX) domain. GPR116 has two C2-set immunoglobulin-like repeats, which is found in the members of the immunoglobulin superfamily of cell surface proteins, and a SEA (sea urchin sperm protein, enterokinase, and a grin)-box, which is present in the extracellular domain of the transmembrane mucin (MUC) family and known to enhance O-glycosylation. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320598 [Multi-domain]  Cd Length: 268  Bit Score: 41.53  E-value: 7.39e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 394 YCWLDMSNWAAMIYFYGPILAIVVANTIMFIMTAIKihgvqreMARIIASENSTKNlrtEKD--KRFYRAwsnyrfglFL 471
Cdd:cd15932  151 VCWLNWDKTKALLAFVIPALAIVVVNFIILIVVIFK-------LLRPSVGERPSKD---EKNalVQIGKS--------VA 212
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 161080260 472 RLFLIMGITWLTELISYFVGSDKGWSKLFYIsdlANAMQGFLIFMLFV-MKKKVKHLI 528
Cdd:cd15932  213 ILTPLLGLTWGFGLGTMIDPKSLAFHIIFAI---LNSFQGFFILVFGTlLDSKVREAL 267
7tmB2_CELSR2 cd15992
Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of ...
245-519 1.14e-03

Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320658  Cd Length: 255  Bit Score: 40.96  E-value: 1.14e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 245 VKIINSYAMMFSIPFMMLTIAVYLLIPELR-NQHG--KSLVCyliglSVGYSSLCYV-QLYQVDATGVtCKVFGYTAYFF 320
Cdd:cd15992    4 LKTLTWSSVGVTLGFLLLTFLFLLCLRALRsNKTSirKNGAT-----ALFLSELVFIlGINQADNPFA-CTVIAILLHFF 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 321 FMGAYMWLSVISFDLWHNFRGTRGINRFQEKkrflFYSLYSWGIAlvflAFtycaqqLTNLPANLKP-GIGDGVYCWLdm 399
Cdd:cd15992   78 YLCTFSWLFLEGLHIYRMLSEVRDINYGPMR----FYYLIGWGVP----AF------ITGLAVGLDPeGYGNPDFCWL-- 141
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 400 SNWAAMIY-FYGPILAIVVANTIMFIMTAIKIHGVQREmaRIIASENSTKNLRTEkdkrfyrawsnyrfglFLRLFLImG 478
Cdd:cd15992  142 SIYDTLIWsFAGPVAFAVSMNVFLYILSSRASCSAQQQ--SFEKKKGPVSGLRTA----------------FTVLLLV-S 202
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 161080260 479 ITWLTELISyfVGSDkgwSKLF-YISDLANAMQGFLIFMLFV 519
Cdd:cd15992  203 VTCLLALLS--VNSD---VILFhYLFAGFNCLQGPFIFLSHV 239
7tmB2_BAI_Adhesion_VII cd15251
brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 ...
308-531 3.44e-03

brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediate direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320379  Cd Length: 253  Bit Score: 39.54  E-value: 3.44e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 308 VTCKVFGYTAYFFFMGAYMWLSVisfDLWHNFRGTRGINRFQE-KKRFLfysLYSWGIALVFLAftycaqqlTNLPANLK 386
Cdd:cd15251   66 GVCTMTAAFLHFFFLSSFCWVLT---EAWQSYMAVTGRMRTRLiRKRFL---CLGWGLPALVVA--------VSVGFTRT 131
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 387 PGIGDGVYCWLDMSnwAAMIY-FYGPILAIVVANTIMFIMTAIKIhgvqreMARIIASENSTKNLrtekdkrfyraWSNy 465
Cdd:cd15251  132 KGYGTSSYCWLSLE--GGLLYaFVGPAAAVVLVNMVIGILVFNKL------VSRDGISDNAMASL-----------WSS- 191
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 161080260 466 rfglfLRLFLIMGITWLTELISYfvgSDKGwSKLFYI-SDLANAMQGFLIFMLF-VMKKKVKHLITNR 531
Cdd:cd15251  192 -----CVVLPLLALTWMSAVLAM---TDRR-SVLFQIlFAVFDSLQGFVIVMVHcILRREVQDAVKCR 250
7tmE_cAMP_R_Slime_mold cd14940
slime mold cyclic AMP receptor, member of the class E family of seven-transmembrane G ...
255-459 8.94e-03

slime mold cyclic AMP receptor, member of the class E family of seven-transmembrane G protein-coupled receptors; This family represents the class E of seven-transmembrane G-protein coupled receptors found in soil-living amoebas, commonly referred to as slime molds. The class E family includes cAMP receptors (cAR1-4) and cAMP receptors-like proteins (CrlA-C) from Dictyostelium discoideum, and their highly homologous cAMP receptors (TasA and TasB) from Polysphondylium pallidum. So far, four subtypes of cAMP receptors (cAR1-4) have been identified that play an essential role in the detection and transmit of the periodic extracellular cAMP waves that regulate chemotactic cell movement during Dictyostelium development, from the unicellular amoeba aggregate into many multicellular slugs and then differentiate into a sporocarp, a fruiting body with cells specialized for different functions. These four subtypes differ in their expression levels and patterns during development. cAR1 is high-affinity receptor that is the first one to be expressed highly during early aggregation and continues to be expressed at low levels during later developmental stages. cAR1 detects extracellular cAMP and is coupled to G-alpha2 protein. Cells lacking cAR1 fail to aggregate, demonstrating that cAR1 is responsible for aggregation. During later aggregation the high-affinity cAR3 receptor is expressed at low levels. Nonetheless, cells lacking cAR3 do not show an obviously altered pattern of development and are still able to aggregate into fruiting bodies. In contrast, cAR2 and cAR4 are low affinity receptors expressed predominantly after aggregation in pre-stalk cells. cAR2 is essential for normal tip formation and deletion of the receptor arrests development at the mound stage. On the other hand, CAR4 regulates axial patterning and cellular differentiation, and deletion of the receptor results in defects during culmination. Furthermore, three cAMP receptor-like proteins (CrlA-C) were identified in Dictyostelium that show limited sequence similarity to the cAMP receptors. Of these CrlA is thought to be required for normal cell growth and tip formation in developing aggregates.


Pssm-ID: 320094 [Multi-domain]  Cd Length: 256  Bit Score: 38.10  E-value: 8.94e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 255 FSIPFMMLTIAVYLLIPELRNQHGKSLVCYLIG-LSVGYSSLCYVQLYQVDATGVTCKVFGYTAYFFFMGAYMWLSVISF 333
Cdd:cd14940   12 SSIIGCLFVLVGFWLLKLLRNHITRVISCFCLTsLLKDIIYTMLTLTQSARPDGFLCYLYAIVITYGSLSCWLWTLCLAI 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 334 DLWHNFRGTRginrFQEKKRFLFYSLYSWGIALvflaFTYCAQQLTNLPANLkpgigdGVYCWLDMSNWA-AMIYFYGPI 412
Cdd:cd14940   92 SIYLLIVKRE----PEPEKFEKYYHFVCWGLPL----ISTIIMLIKHHYGPV------GNWCWIGNQYTGyRFGLFYGPF 157
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 161080260 413 LAIVVANTIMFIMTAIKIHGVqremARIIASENSTKNLRTEKDKRFY 459
Cdd:cd14940  158 FIIFGISAVLVGLTSHYTYQV----IHNWVSDNKDLHKTYQFKLVNY 200
7tmB2_Latrophilin-1 cd16007
Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled ...
308-532 9.91e-03

Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320673 [Multi-domain]  Cd Length: 258  Bit Score: 37.98  E-value: 9.91e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 308 VTCKVFGYTAYFFFMGAYMWLSVISFDLWHNFrgtrgINRFQ-EKKRFLFYSLYSWGIALVFLAFTYCAQQLTnlpanlk 386
Cdd:cd16007   65 IACPIFAGLLHFFFLAAFSWLCLEGVQLYLML-----VEVFEsEYSRKKYYYLCGYCFPALVVGISAAIDYRS------- 132
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 161080260 387 pgIGDGVYCWLDMSNWAaMIYFYGPILAIVVANTIMFIMTaikIHGVQREMARIIASENSTKNLRTekdkrfyraWSnyr 466
Cdd:cd16007  133 --YGTEKACWLRVDNYF-IWSFIGPVSFVIVVNLVFLMVT---LHKMIRSSSVLKPDSSRLDNIKS---------WA--- 194
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 161080260 467 FGLFLRLFLiMGITWLTELIsyFVgsDKGWSKLFYISDLANAMQGFLIFMLFVMKKKVKHLITNRC 532
Cdd:cd16007  195 LGAITLLFL-LGLTWAFGLL--FI--NKESVVMAYLFTTFNAFQGMFIFIFHCALQKKVHKEYSKC 255
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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