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Conserved domains on  [gi|30689398|ref|NP_849484|]
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Cytochrome bd ubiquinol oxidase, 14kDa subunit [Arabidopsis thaliana]

Protein Classification

cytochrome b-c1 complex subunit 7( domain architecture ID 10491599)

cytochrome b-c1 complex subunit 7 is the 14kD subunit of the ubiquinol-cytochrome c oxidoreductase (b-c1 complex) which is part of the respiratory electron transport chain; similar to Saccharomyces cerevisiae Qcr7p

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
UCR_14kD pfam02271
Ubiquinol-cytochrome C reductase complex 14kD subunit; The ubiquinol-cytochrome C reductase ...
 4-99 4.42e-25

Ubiquinol-cytochrome C reductase complex 14kD subunit; The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex. This Pfam family represents the 14kD (or VI) subunit of the complex which is not directly involved in electron transfer, but has a role in assembly of the complex.


:

Pssm-ID: 460519  Cd Length: 100  Bit Score: 89.88  E-value: 4.42e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30689398     4 LLKAFIDPkknfLARMHMKAIStrLRRYGLRYDDLYDQYySMDIKEAMNRLPREVVDARNQRLKRAMDLSMKHEYLPKDL 83
Cdd:pfam02271   2 WLSKLLKP----IAKWYANAAG--YRKLGLRYDDLLIEE-NPDVQEALRRLPPKESYDRVFRIRRALQLSLKHKLLPKEQ 74

                          90
                  ....*....|....*.
gi 30689398    84 QAVQTPFRGYLQDMLA 99
Cdd:pfam02271  75 WTKPEEDVPYLTPYID 90
 
Name Accession Description Interval E-value
UCR_14kD pfam02271
Ubiquinol-cytochrome C reductase complex 14kD subunit; The ubiquinol-cytochrome C reductase ...
 4-99 4.42e-25

Ubiquinol-cytochrome C reductase complex 14kD subunit; The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex. This Pfam family represents the 14kD (or VI) subunit of the complex which is not directly involved in electron transfer, but has a role in assembly of the complex.


Pssm-ID: 460519  Cd Length: 100  Bit Score: 89.88  E-value: 4.42e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30689398     4 LLKAFIDPkknfLARMHMKAIStrLRRYGLRYDDLYDQYySMDIKEAMNRLPREVVDARNQRLKRAMDLSMKHEYLPKDL 83
Cdd:pfam02271   2 WLSKLLKP----IAKWYANAAG--YRKLGLRYDDLLIEE-NPDVQEALRRLPPKESYDRVFRIRRALQLSLKHKLLPKEQ 74

                          90
                  ....*....|....*.
gi 30689398    84 QAVQTPFRGYLQDMLA 99
Cdd:pfam02271  75 WTKPEEDVPYLTPYID 90
 
Name Accession Description Interval E-value
UCR_14kD pfam02271
Ubiquinol-cytochrome C reductase complex 14kD subunit; The ubiquinol-cytochrome C reductase ...
 4-99 4.42e-25

Ubiquinol-cytochrome C reductase complex 14kD subunit; The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex. This Pfam family represents the 14kD (or VI) subunit of the complex which is not directly involved in electron transfer, but has a role in assembly of the complex.


Pssm-ID: 460519  Cd Length: 100  Bit Score: 89.88  E-value: 4.42e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30689398     4 LLKAFIDPkknfLARMHMKAIStrLRRYGLRYDDLYDQYySMDIKEAMNRLPREVVDARNQRLKRAMDLSMKHEYLPKDL 83
Cdd:pfam02271   2 WLSKLLKP----IAKWYANAAG--YRKLGLRYDDLLIEE-NPDVQEALRRLPPKESYDRVFRIRRALQLSLKHKLLPKEQ 74

                          90
                  ....*....|....*.
gi 30689398    84 QAVQTPFRGYLQDMLA 99
Cdd:pfam02271  75 WTKPEEDVPYLTPYID 90
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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