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Conserved domains on  [gi|150170694|ref|NP_997329|]
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membrane protein FAM174B precursor [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1180 super family cl05954
Protein of unknown function (DUF1180); This family consists of several hypothetical mammalian ...
 75-158 5.59e-26

Protein of unknown function (DUF1180); This family consists of several hypothetical mammalian proteins of around 190 residues in length. The function of this family is unknown.


The actual alignment was detected with superfamily member pfam06679:

Pssm-ID: 429067  Cd Length: 167  Bit Score: 96.50  E-value: 5.59e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150170694   75 DALVTRISILLRDLPTLKAAVIVAFAFTTLLIACLLLRVFRSGKRLKKTRKYDIITTPAERVEMAPLNEEDDEDEDSTVF 154
Cdd:pfam06679  81 LAVSPEISSPLDKPMTLQRALTVLVVVSAAVIVYFVVRTVRMRRRNRKTRRYGVLDTNIENMELTPLEQDEDEDDDNTLF 160


                  ....
gi 150170694  155 DIKY 158
Cdd:pfam06679 161 DANH 164
 
Name Accession Description Interval E-value
DUF1180 pfam06679
Protein of unknown function (DUF1180); This family consists of several hypothetical mammalian ...
 75-158 5.59e-26

Protein of unknown function (DUF1180); This family consists of several hypothetical mammalian proteins of around 190 residues in length. The function of this family is unknown.


Pssm-ID: 429067  Cd Length: 167  Bit Score: 96.50  E-value: 5.59e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150170694   75 DALVTRISILLRDLPTLKAAVIVAFAFTTLLIACLLLRVFRSGKRLKKTRKYDIITTPAERVEMAPLNEEDDEDEDSTVF 154
Cdd:pfam06679  81 LAVSPEISSPLDKPMTLQRALTVLVVVSAAVIVYFVVRTVRMRRRNRKTRRYGVLDTNIENMELTPLEQDEDEDDDNTLF 160


                  ....
gi 150170694  155 DIKY 158
Cdd:pfam06679 161 DANH 164
 
Name Accession Description Interval E-value
DUF1180 pfam06679
Protein of unknown function (DUF1180); This family consists of several hypothetical mammalian ...
 75-158 5.59e-26

Protein of unknown function (DUF1180); This family consists of several hypothetical mammalian proteins of around 190 residues in length. The function of this family is unknown.


Pssm-ID: 429067  Cd Length: 167  Bit Score: 96.50  E-value: 5.59e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150170694   75 DALVTRISILLRDLPTLKAAVIVAFAFTTLLIACLLLRVFRSGKRLKKTRKYDIITTPAERVEMAPLNEEDDEDEDSTVF 154
Cdd:pfam06679  81 LAVSPEISSPLDKPMTLQRALTVLVVVSAAVIVYFVVRTVRMRRRNRKTRRYGVLDTNIENMELTPLEQDEDEDDDNTLF 160


                  ....
gi 150170694  155 DIKY 158
Cdd:pfam06679 161 DANH 164
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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