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Conserved domains on  [gi|446410552|ref|WP_000488407|]
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MULTISPECIES: DUF4222 domain-containing protein [Enterobacteriaceae]

Protein Classification

DUF4222 domain-containing protein( domain architecture ID 10623526)

DUF4222 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4222 pfam13973
Domain of unknown function (DUF4222); This short protein is likely to be of phage origin. For ...
 3-53 1.10e-15

Domain of unknown function (DUF4222); This short protein is likely to be of phage origin. For example it is found in the Enterobacteria phage YYZ-2008. It is largely found in enteric bacteria. The molecular function of this protein is unknown.


:

Pssm-ID: 372855  Cd Length: 53  Bit Score: 64.55  E-value: 1.10e-15
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 446410552   3 RIIFPNTWYVDHHGTPCKILRSTHNKVHYIRKG--RTCIASMFRFNHDFEPVN 53
Cdd:pfam13973  1 PIIQPGDIYRDKHGVTVTVISVDFNRVTFRRDGyeHPCVAPLYRFNKEFTRVD 53
 
Name Accession Description Interval E-value
DUF4222 pfam13973
Domain of unknown function (DUF4222); This short protein is likely to be of phage origin. For ...
 3-53 1.10e-15

Domain of unknown function (DUF4222); This short protein is likely to be of phage origin. For example it is found in the Enterobacteria phage YYZ-2008. It is largely found in enteric bacteria. The molecular function of this protein is unknown.


Pssm-ID: 372855  Cd Length: 53  Bit Score: 64.55  E-value: 1.10e-15
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 446410552   3 RIIFPNTWYVDHHGTPCKILRSTHNKVHYIRKG--RTCIASMFRFNHDFEPVN 53
Cdd:pfam13973  1 PIIQPGDIYRDKHGVTVTVISVDFNRVTFRRDGyeHPCVAPLYRFNKEFTRVD 53
 
Name Accession Description Interval E-value
DUF4222 pfam13973
Domain of unknown function (DUF4222); This short protein is likely to be of phage origin. For ...
 3-53 1.10e-15

Domain of unknown function (DUF4222); This short protein is likely to be of phage origin. For example it is found in the Enterobacteria phage YYZ-2008. It is largely found in enteric bacteria. The molecular function of this protein is unknown.


Pssm-ID: 372855  Cd Length: 53  Bit Score: 64.55  E-value: 1.10e-15
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 446410552   3 RIIFPNTWYVDHHGTPCKILRSTHNKVHYIRKG--RTCIASMFRFNHDFEPVN 53
Cdd:pfam13973  1 PIIQPGDIYRDKHGVTVTVISVDFNRVTFRRDGyeHPCVAPLYRFNKEFTRVD 53
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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