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Conserved domains on  [gi|446702600|ref|WP_000779946|]
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MULTISPECIES: YwiC-like family protein [Bacillus]

Protein Classification

YwiC-like family protein( domain architecture ID 10625870)

YwiC-like family protein similar to Bacillus subtilis YwiC, an uncharacterized protein predicted to be located in the cytoplasmic membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YwiC pfam14256
YwiC-like protein; The YwiC-like protein family includes the B. subtilis YwiC protein, which ...
 5-127 1.94e-43

YwiC-like protein; The YwiC-like protein family includes the B. subtilis YwiC protein, which is functionally uncharacterized. This domain family is found in bacteria, and is approximately 130 amino acids in length. There is a single completely conserved residue G that may be functionally important.


:

Pssm-ID: 433814  Cd Length: 124  Bit Score: 142.72  E-value: 1.94e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446702600    5 IPKQHGAWAMLAIPFLLSVILGKPTIYHIPLFIAWFFIYLATYPFLMYIKQKRKKEYLHASIVYFIIAFVFGMISLLYEW 84
Cdd:pfam14256   1 IPNQHGAWAMLLVPFLLGLAAAGPSWAHLPLLVAWLFGYLASYPLLLWLKQRRRPRYLKWLLIYGAIALAFGLPVLLLAP 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 446702600   85 RILLFVIVMIPLFIVNMHYARQKNERALLNDICAIIVFCVGGL 127
Cdd:pfam14256  81 ALLWWALAALPLFAVNLYFAKRRRERSLLNDLAAVAAFSLMGP 123
 
Name Accession Description Interval E-value
YwiC pfam14256
YwiC-like protein; The YwiC-like protein family includes the B. subtilis YwiC protein, which ...
 5-127 1.94e-43

YwiC-like protein; The YwiC-like protein family includes the B. subtilis YwiC protein, which is functionally uncharacterized. This domain family is found in bacteria, and is approximately 130 amino acids in length. There is a single completely conserved residue G that may be functionally important.


Pssm-ID: 433814  Cd Length: 124  Bit Score: 142.72  E-value: 1.94e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446702600    5 IPKQHGAWAMLAIPFLLSVILGKPTIYHIPLFIAWFFIYLATYPFLMYIKQKRKKEYLHASIVYFIIAFVFGMISLLYEW 84
Cdd:pfam14256   1 IPNQHGAWAMLLVPFLLGLAAAGPSWAHLPLLVAWLFGYLASYPLLLWLKQRRRPRYLKWLLIYGAIALAFGLPVLLLAP 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 446702600   85 RILLFVIVMIPLFIVNMHYARQKNERALLNDICAIIVFCVGGL 127
Cdd:pfam14256  81 ALLWWALAALPLFAVNLYFAKRRRERSLLNDLAAVAAFSLMGP 123
 
Name Accession Description Interval E-value
YwiC pfam14256
YwiC-like protein; The YwiC-like protein family includes the B. subtilis YwiC protein, which ...
 5-127 1.94e-43

YwiC-like protein; The YwiC-like protein family includes the B. subtilis YwiC protein, which is functionally uncharacterized. This domain family is found in bacteria, and is approximately 130 amino acids in length. There is a single completely conserved residue G that may be functionally important.


Pssm-ID: 433814  Cd Length: 124  Bit Score: 142.72  E-value: 1.94e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446702600    5 IPKQHGAWAMLAIPFLLSVILGKPTIYHIPLFIAWFFIYLATYPFLMYIKQKRKKEYLHASIVYFIIAFVFGMISLLYEW 84
Cdd:pfam14256   1 IPNQHGAWAMLLVPFLLGLAAAGPSWAHLPLLVAWLFGYLASYPLLLWLKQRRRPRYLKWLLIYGAIALAFGLPVLLLAP 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 446702600   85 RILLFVIVMIPLFIVNMHYARQKNERALLNDICAIIVFCVGGL 127
Cdd:pfam14256  81 ALLWWALAALPLFAVNLYFAKRRRERSLLNDLAAVAAFSLMGP 123
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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