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Conserved domains on  [gi|446745800|ref|WP_000823056|]
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MULTISPECIES: bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR [Streptococcus]

Protein Classification

bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase( domain architecture ID 10012271)

bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase regulates transcriptional attenuation of the pyrimidine nucleotide (pyr) operon by binding in a uridine-dependent manner to specific sites on pyr mRNA

Gene Ontology:  GO:0003723|GO:0004845|GO:0006355

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK05205 PRK05205
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;
1-171 2.40e-94

bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;


:

Pssm-ID: 235365  Cd Length: 176  Bit Score: 271.23  E-value: 2.40e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446745800   1 MKRKEIIDDVTMKRAITRITYEIIERNKNLDNIVLAGIKTRGVFLAKRIQERLKQLENLDIPVGELDTKPFRDDMK---- 76
Cdd:PRK05205   1 MMKKEILDAEALRRALTRIAHEIIERNKGLDNLVLVGIKTRGVWLAERLAERLEQLEGVDVPVGELDITLYRDDLTkkgl 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446745800  77 -VEVDTTTMPVDITDKDIILIDDVLYTGRTIRAAIDNLVSLGRPSRVSLAVLIDRGHRELPIRADYVGKNIPTSQFEEIL 155
Cdd:PRK05205  81 hPQVKPTDIPFDIEGKRVILVDDVLYTGRTIRAALDALFDYGRPARVQLAVLVDRGHRELPIRADYVGKNIPTSRDERVV 160

                        170
                 ....*....|....*.
gi 446745800 156 VEVMEHDGYDRVSIID 171
Cdd:PRK05205 161 VRLAEVDGRDRVVLER 176
 
Name Accession Description Interval E-value
PRK05205 PRK05205
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;
1-171 2.40e-94

bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;


Pssm-ID: 235365  Cd Length: 176  Bit Score: 271.23  E-value: 2.40e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446745800   1 MKRKEIIDDVTMKRAITRITYEIIERNKNLDNIVLAGIKTRGVFLAKRIQERLKQLENLDIPVGELDTKPFRDDMK---- 76
Cdd:PRK05205   1 MMKKEILDAEALRRALTRIAHEIIERNKGLDNLVLVGIKTRGVWLAERLAERLEQLEGVDVPVGELDITLYRDDLTkkgl 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446745800  77 -VEVDTTTMPVDITDKDIILIDDVLYTGRTIRAAIDNLVSLGRPSRVSLAVLIDRGHRELPIRADYVGKNIPTSQFEEIL 155
Cdd:PRK05205  81 hPQVKPTDIPFDIEGKRVILVDDVLYTGRTIRAALDALFDYGRPARVQLAVLVDRGHRELPIRADYVGKNIPTSRDERVV 160

                        170
                 ....*....|....*.
gi 446745800 156 VEVMEHDGYDRVSIID 171
Cdd:PRK05205 161 VRLAEVDGRDRVVLER 176
PyrR COG2065
Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase [Nucleotide ...
 1-172 4.30e-90

Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]; Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase is part of the Pathway/BioSystem: Pyrimidine salvage


Pssm-ID: 441668  Cd Length: 178  Bit Score: 260.37  E-value: 4.30e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446745800   1 MKRKEIIDDVTMKRAITRITYEIIERNKNLDNIVLAGIKTRGVFLAKRIQERLKQLENLDIPVGELDTKPFRDD-----M 75
Cdd:COG2065    1 KKKKEILDAADIDRALTRIAHEIIERNKGLEDLVLVGIQTRGVPLAERLAERIEEIEGVKVPVGSLDITLYRDDlrrrpP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446745800  76 KVEVDTTTMPVDITDKDIILIDDVLYTGRTIRAAIDNLVSLGRPSRVSLAVLIDRGHRELPIRADYVGKNIPTSQFEEIL 155
Cdd:COG2065   81 RPVVNETEIPFDIDGKTVVLVDDVLYTGRTVRAALDALMDFGRPAKIQLAVLVDRGHRELPIRADYVGKNVPTSRSERVE 160

                        170
                 ....*....|....*..
gi 446745800 156 VEVMEHDGYDRVSIIDP 172
Cdd:COG2065  161 VRLKEIDGEDAVVIVEP 177
Pribosyltran pfam00156
Phosphoribosyl transferase domain; This family includes a range of diverse phosphoribosyl ...
 4-142 4.68e-16

Phosphoribosyl transferase domain; This family includes a range of diverse phosphoribosyl transferase enzymes. This family includes: Adenine phosphoribosyl-transferase EC:2.4.2.7. Hypoxanthine-guanine-xanthine phosphoribosyl-transferase. Hypoxanthine phosphoribosyl-transferase EC:2.4.2.8. Ribose-phosphate pyrophosphokinase i EC:2.7.6.1. Amidophosphoribosyltransferase EC:2.4.2.14. Orotate phosphoribosyl-transferase EC:2.4.2.10. Uracil phosphoribosyl-transferase EC:2.4.2.9. Xanthine-guanine phosphoribosyl-transferase EC:2.4.2.22. In Arabidopsis, At the very N-terminus of this domain is the P-Loop NTPase domain.


Pssm-ID: 425489 [Multi-domain]  Cd Length: 150  Bit Score: 70.86  E-value: 4.68e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446745800    4 KEIIDDVTMKRAITRITYEIIErNKNLDNIVLAGIKTRGVFLAKRIQERLkqlenlDIPVGELDTKPFRDDMKVEVDTTT 83
Cdd:pfam00156   3 DEILDNPAILKAVARLAAQINE-DYGGKPDVVVGILRGGLPFAGILARRL------DVPLAFVRKVSYNPDTSEVMKTSS 75

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 446745800   84 MPVDITDKDIILIDDVLYTGRTIRAAIDNLVSLGrPSRVSLAVLIDRGHRELPIRADYV 142
Cdd:pfam00156  76 ALPDLKGKTVLIVDDILDTGGTLLKVLELLKNVG-PKEVKIAVLIDKPAGTEPKDKYDK 133
PRTases_typeI cd06223
Phosphoribosyl transferase (PRT)-type I domain; Phosphoribosyl transferase (PRT) domain. The ...
 15-143 1.13e-13

Phosphoribosyl transferase (PRT)-type I domain; Phosphoribosyl transferase (PRT) domain. The type I PRTases are identified by a conserved PRPP binding motif which features two adjacent acidic residues surrounded by one or more hydrophobic residue. PRTases catalyze the displacement of the alpha-1'-pyrophosphate of 5-phosphoribosyl-alpha1-pyrophosphate (PRPP) by a nitrogen-containing nucleophile. The reaction products are an alpha-1 substituted ribose-5'-phosphate and a free pyrophosphate (PP). PRPP, an activated form of ribose-5-phosphate, is a key metabolite connecting nucleotide synthesis and salvage pathways. The type I PRTase family includes a range of diverse phosphoribosyl transferase enzymes and regulatory proteins of the nucleotide synthesis and salvage pathways, including adenine phosphoribosyltransferase EC:2.4.2.7., hypoxanthine-guanine-xanthine phosphoribosyltransferase, hypoxanthine phosphoribosyltransferase EC:2.4.2.8., ribose-phosphate pyrophosphokinase EC:2.7.6.1., amidophosphoribosyltransferase EC:2.4.2.14., orotate phosphoribosyltransferase EC:2.4.2.10., uracil phosphoribosyltransferase EC:2.4.2.9., and xanthine-guanine phosphoribosyltransferase EC:2.4.2.22.


Pssm-ID: 206754 [Multi-domain]  Cd Length: 130  Bit Score: 64.34  E-value: 1.13e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446745800  15 AITRITYEIieRNKNLDNIVLAGIKTRGVFLAKRIQERLkqlenlDIPVGELDTKPFRDDMKVEVDTT---TMPVDITDK 91
Cdd:cd06223    1 AGRLLAEEI--REDLLEPDVVVGILRGGLPLAAALARAL------GLPLAFIRKERKGPGRTPSEPYGlelPLGGDVKGK 72

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446745800  92 DIILIDDVLYTGRTIRAAIDNLVSLGrPSRVSLAVLIDRGHR-----ELPIRADYVG 143
Cdd:cd06223   73 RVLLVDDVIATGGTLLAAIELLKEAG-AKVVGVAVLLDKPEGgarelASPGDPVYSL 128
 
Name Accession Description Interval E-value
PRK05205 PRK05205
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;
1-171 2.40e-94

bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;


Pssm-ID: 235365  Cd Length: 176  Bit Score: 271.23  E-value: 2.40e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446745800   1 MKRKEIIDDVTMKRAITRITYEIIERNKNLDNIVLAGIKTRGVFLAKRIQERLKQLENLDIPVGELDTKPFRDDMK---- 76
Cdd:PRK05205   1 MMKKEILDAEALRRALTRIAHEIIERNKGLDNLVLVGIKTRGVWLAERLAERLEQLEGVDVPVGELDITLYRDDLTkkgl 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446745800  77 -VEVDTTTMPVDITDKDIILIDDVLYTGRTIRAAIDNLVSLGRPSRVSLAVLIDRGHRELPIRADYVGKNIPTSQFEEIL 155
Cdd:PRK05205  81 hPQVKPTDIPFDIEGKRVILVDDVLYTGRTIRAALDALFDYGRPARVQLAVLVDRGHRELPIRADYVGKNIPTSRDERVV 160

                        170
                 ....*....|....*.
gi 446745800 156 VEVMEHDGYDRVSIID 171
Cdd:PRK05205 161 VRLAEVDGRDRVVLER 176
PyrR COG2065
Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase [Nucleotide ...
 1-172 4.30e-90

Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]; Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase is part of the Pathway/BioSystem: Pyrimidine salvage


Pssm-ID: 441668  Cd Length: 178  Bit Score: 260.37  E-value: 4.30e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446745800   1 MKRKEIIDDVTMKRAITRITYEIIERNKNLDNIVLAGIKTRGVFLAKRIQERLKQLENLDIPVGELDTKPFRDD-----M 75
Cdd:COG2065    1 KKKKEILDAADIDRALTRIAHEIIERNKGLEDLVLVGIQTRGVPLAERLAERIEEIEGVKVPVGSLDITLYRDDlrrrpP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446745800  76 KVEVDTTTMPVDITDKDIILIDDVLYTGRTIRAAIDNLVSLGRPSRVSLAVLIDRGHRELPIRADYVGKNIPTSQFEEIL 155
Cdd:COG2065   81 RPVVNETEIPFDIDGKTVVLVDDVLYTGRTVRAALDALMDFGRPAKIQLAVLVDRGHRELPIRADYVGKNVPTSRSERVE 160

                        170
                 ....*....|....*..
gi 446745800 156 VEVMEHDGYDRVSIIDP 172
Cdd:COG2065  161 VRLKEIDGEDAVVIVEP 177
Pribosyltran pfam00156
Phosphoribosyl transferase domain; This family includes a range of diverse phosphoribosyl ...
 4-142 4.68e-16

Phosphoribosyl transferase domain; This family includes a range of diverse phosphoribosyl transferase enzymes. This family includes: Adenine phosphoribosyl-transferase EC:2.4.2.7. Hypoxanthine-guanine-xanthine phosphoribosyl-transferase. Hypoxanthine phosphoribosyl-transferase EC:2.4.2.8. Ribose-phosphate pyrophosphokinase i EC:2.7.6.1. Amidophosphoribosyltransferase EC:2.4.2.14. Orotate phosphoribosyl-transferase EC:2.4.2.10. Uracil phosphoribosyl-transferase EC:2.4.2.9. Xanthine-guanine phosphoribosyl-transferase EC:2.4.2.22. In Arabidopsis, At the very N-terminus of this domain is the P-Loop NTPase domain.


Pssm-ID: 425489 [Multi-domain]  Cd Length: 150  Bit Score: 70.86  E-value: 4.68e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446745800    4 KEIIDDVTMKRAITRITYEIIErNKNLDNIVLAGIKTRGVFLAKRIQERLkqlenlDIPVGELDTKPFRDDMKVEVDTTT 83
Cdd:pfam00156   3 DEILDNPAILKAVARLAAQINE-DYGGKPDVVVGILRGGLPFAGILARRL------DVPLAFVRKVSYNPDTSEVMKTSS 75

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 446745800   84 MPVDITDKDIILIDDVLYTGRTIRAAIDNLVSLGrPSRVSLAVLIDRGHRELPIRADYV 142
Cdd:pfam00156  76 ALPDLKGKTVLIVDDILDTGGTLLKVLELLKNVG-PKEVKIAVLIDKPAGTEPKDKYDK 133
PRTases_typeI cd06223
Phosphoribosyl transferase (PRT)-type I domain; Phosphoribosyl transferase (PRT) domain. The ...
 15-143 1.13e-13

Phosphoribosyl transferase (PRT)-type I domain; Phosphoribosyl transferase (PRT) domain. The type I PRTases are identified by a conserved PRPP binding motif which features two adjacent acidic residues surrounded by one or more hydrophobic residue. PRTases catalyze the displacement of the alpha-1'-pyrophosphate of 5-phosphoribosyl-alpha1-pyrophosphate (PRPP) by a nitrogen-containing nucleophile. The reaction products are an alpha-1 substituted ribose-5'-phosphate and a free pyrophosphate (PP). PRPP, an activated form of ribose-5-phosphate, is a key metabolite connecting nucleotide synthesis and salvage pathways. The type I PRTase family includes a range of diverse phosphoribosyl transferase enzymes and regulatory proteins of the nucleotide synthesis and salvage pathways, including adenine phosphoribosyltransferase EC:2.4.2.7., hypoxanthine-guanine-xanthine phosphoribosyltransferase, hypoxanthine phosphoribosyltransferase EC:2.4.2.8., ribose-phosphate pyrophosphokinase EC:2.7.6.1., amidophosphoribosyltransferase EC:2.4.2.14., orotate phosphoribosyltransferase EC:2.4.2.10., uracil phosphoribosyltransferase EC:2.4.2.9., and xanthine-guanine phosphoribosyltransferase EC:2.4.2.22.


Pssm-ID: 206754 [Multi-domain]  Cd Length: 130  Bit Score: 64.34  E-value: 1.13e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446745800  15 AITRITYEIieRNKNLDNIVLAGIKTRGVFLAKRIQERLkqlenlDIPVGELDTKPFRDDMKVEVDTT---TMPVDITDK 91
Cdd:cd06223    1 AGRLLAEEI--REDLLEPDVVVGILRGGLPLAAALARAL------GLPLAFIRKERKGPGRTPSEPYGlelPLGGDVKGK 72

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446745800  92 DIILIDDVLYTGRTIRAAIDNLVSLGrPSRVSLAVLIDRGHR-----ELPIRADYVG 143
Cdd:cd06223   73 RVLLVDDVIATGGTLLAAIELLKEAG-AKVVGVAVLLDKPEGgarelASPGDPVYSL 128
HptA COG0634
Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]; ...
 87-147 1.57e-11

Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]; Hypoxanthine-guanine phosphoribosyltransferase is part of the Pathway/BioSystem: Purine salvage


Pssm-ID: 440399  Cd Length: 176  Bit Score: 59.27  E-value: 1.57e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446745800  87 DITDKDIILIDDVLYTGRTIRAAIDNLVSLGrPSRVSLAVLIDRGH-RELPIRADYVGKNIP 147
Cdd:COG0634   88 DIEGRDVLIVEDIIDTGLTLSYLLELLKSRG-PASVKIATLLDKPErRKVDVPADYVGFEIP 148
PRK09162 PRK09162
hypoxanthine-guanine phosphoribosyltransferase; Provisional
 86-147 1.78e-06

hypoxanthine-guanine phosphoribosyltransferase; Provisional


Pssm-ID: 181675  Cd Length: 181  Bit Score: 45.62  E-value: 1.78e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446745800  86 VDITDKDIILIDDVLYTGRTIRAAIDNLVSLGrPSRVSLAVLIDRGH-RELP-IRADYVGKNIP 147
Cdd:PRK09162  93 ESLKGRTVLVVDDILDEGHTLAAIRDRCLEMG-AAEVYSAVLVDKTHdRKAKpLKADFVGLEVP 155
Hpt1 COG2236
Hypoxanthine phosphoribosyltransferase [Coenzyme transport and metabolism]; Hypoxanthine ...
 14-148 2.47e-05

Hypoxanthine phosphoribosyltransferase [Coenzyme transport and metabolism]; Hypoxanthine phosphoribosyltransferase is part of the Pathway/BioSystem: Purine salvage


Pssm-ID: 441837 [Multi-domain]  Cd Length: 153  Bit Score: 42.14  E-value: 2.47e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446745800  14 RAITRITYEIIERNKNLDNIVlaGIKTRGVFLAKRIQERLkQLENLDIpvgeLDTKpFRDDMKVEVDTT----TMPVDIT 89
Cdd:COG2236   16 ELSRRLAEQILESGFRPDVIV--AIARGGLVPARILADAL-GVPDLAS----IRVS-SYTGTAKRLEEPvvkgPLDEDLA 87

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 446745800  90 DKDIILIDDVLYTGRTIRAAIDNLVSLGrPSRVSLAVLIDRGHRElpIRADYVGKNIPT 148
Cdd:COG2236   88 GKRVLIVDDVADTGRTLEAVRDLLKEAG-PAEVRTAVLYYKPSSK--FKPDYYAEETDA 143
COG1926 COG1926
Predicted phosphoribosyltransferase [General function prediction only];
85-126 3.50e-05

Predicted phosphoribosyltransferase [General function prediction only];


Pssm-ID: 441529  Cd Length: 209  Bit Score: 42.37  E-value: 3.50e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 446745800  85 PVDITDKDIILIDDVLYTGRTIRAAIDNLVSLGrPSRVSLAV 126
Cdd:COG1926  116 PPDLKGRTVILVDDGIATGATMRAALRALRRQG-PARIVVAV 156
PLN02238 PLN02238
hypoxanthine phosphoribosyltransferase
 77-147 4.65e-04

hypoxanthine phosphoribosyltransferase


Pssm-ID: 215132  Cd Length: 189  Bit Score: 38.87  E-value: 4.65e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446745800  77 VEVDTTTMPVDITDKDIILIDDVLYTGRTIRAAIDNLVSLGrPSRVSLAVLID-RGHRELPIR-----ADYVGKNIP 147
Cdd:PLN02238  84 AKVSGADLKIDVKGKHVLLVEDIVDTGNTLSALVAHLEAKG-AASVSVCALLDkRARRKVKYElvgdgKEYVGFECP 159
upp PRK00129
uracil phosphoribosyltransferase; Reviewed
 84-128 1.59e-03

uracil phosphoribosyltransferase; Reviewed


Pssm-ID: 234653  Cd Length: 209  Bit Score: 37.38  E-value: 1.59e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 446745800  84 MPVDITDKDIILIDDVLYTGRTIRAAIDNLVSLGrPSRVSLAVLI 128
Cdd:PRK00129 118 LPEDIDERTVIVVDPMLATGGSAIAAIDLLKKRG-AKNIKVLCLV 161
PRK06031 PRK06031
phosphoribosyltransferase; Provisional
 34-140 3.45e-03

phosphoribosyltransferase; Provisional


Pssm-ID: 235678  Cd Length: 233  Bit Score: 36.66  E-value: 3.45e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446745800  34 VLAGIKTRGVFLAKRIQERLKQLENldIPVGELDTKPFRDDMKVEVDTTTMP-------VD------ITDKDIILIDDVL 100
Cdd:PRK06031  87 VVAGLPTLGLTLAAAVARKLGHTRY--VPLGTSRKFWYRDELSVPLSSITTPdqgkrlyIDprmlplLEGRRVALIDDVI 164

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 446745800 101 YTGRTIRAAIDNLVSLG-RPSRVSLAVLIDRGHRELPIRAD 140
Cdd:PRK06031 165 SSGASIVAGLRLLAACGiEPAGIGAAMLQSERWRESLAAAG 205
ComFC COG1040
DNA utilization protein ComFC/GntX, contains phosphoribosyltransferase domain [General ...
 85-127 3.63e-03

DNA utilization protein ComFC/GntX, contains phosphoribosyltransferase domain [General function prediction only];


Pssm-ID: 440662 [Multi-domain]  Cd Length: 196  Bit Score: 36.34  E-value: 3.63e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 446745800  85 PVDITDKDIILIDDVLYTGRTIRAAIDNLVSLGrPSRVSLAVL 127
Cdd:COG1040  150 PARLAGKHVLLVDDVLTTGATLAEAARALKAAG-AARVDVLVL 191
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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