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Conserved domains on  [gi|446767733|ref|WP_000844989|]
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MULTISPECIES: DUF3925 family protein [Bacillus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3925 super family cl16069
Protein of unknown function (DUF3925); This family of proteins is functionally uncharacterized. ...
 1-65 3.34e-30

Protein of unknown function (DUF3925); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 70 amino acids in length.


The actual alignment was detected with superfamily member pfam13063:

Pssm-ID: 432952  Cd Length: 65  Bit Score: 100.73  E-value: 3.34e-30
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446767733   1 MKTAQPETISNREFYFVLYMMLLYVTGWVIDVNGLFLSSYFNLAGEITLPIVGGIVGLFVMSINK 65
Cdd:pfam13063  1 MKTAQHEKISDREFYFVLYMMLLFVTGWFIDINGAFLAKYFNLAGEIMIPAIGGIVGLFIMSLGE 65
 
Name Accession Description Interval E-value
DUF3925 pfam13063
Protein of unknown function (DUF3925); This family of proteins is functionally uncharacterized. ...
 1-65 3.34e-30

Protein of unknown function (DUF3925); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 70 amino acids in length.


Pssm-ID: 432952  Cd Length: 65  Bit Score: 100.73  E-value: 3.34e-30
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446767733   1 MKTAQPETISNREFYFVLYMMLLYVTGWVIDVNGLFLSSYFNLAGEITLPIVGGIVGLFVMSINK 65
Cdd:pfam13063  1 MKTAQHEKISDREFYFVLYMMLLFVTGWFIDINGAFLAKYFNLAGEIMIPAIGGIVGLFIMSLGE 65
 
Name Accession Description Interval E-value
DUF3925 pfam13063
Protein of unknown function (DUF3925); This family of proteins is functionally uncharacterized. ...
 1-65 3.34e-30

Protein of unknown function (DUF3925); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 70 amino acids in length.


Pssm-ID: 432952  Cd Length: 65  Bit Score: 100.73  E-value: 3.34e-30
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446767733   1 MKTAQPETISNREFYFVLYMMLLYVTGWVIDVNGLFLSSYFNLAGEITLPIVGGIVGLFVMSINK 65
Cdd:pfam13063  1 MKTAQHEKISDREFYFVLYMMLLFVTGWFIDINGAFLAKYFNLAGEIMIPAIGGIVGLFIMSLGE 65
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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