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Conserved domains on  [gi|446985501|ref|WP_001062757|]
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MULTISPECIES: flavodoxin [Bacillus]

Protein Classification

flavodoxin( domain architecture ID 10012794)

flavodoxin is a low-potential electron donor to a number of redox enzymes

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK06703 PRK06703
flavodoxin; Provisional
 1-147 9.76e-85

flavodoxin; Provisional


:

Pssm-ID: 235854 [Multi-domain]  Cd Length: 151  Bit Score: 244.67  E-value: 9.76e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   1 MAKILIAYASMSGNTESIADLIKVSLDAFDHEVVLQEMEGMDAEELLAYDGIILGSYTWGDGELPFEAEDFHDELENIDL 80
Cdd:PRK06703   1 MAKILIAYASMSGNTEDIADLIKVSLDAFDHEVVLQEMDGMDAEELLAYDGIILGSYTWGDGDLPYEAEDFHEDLENIDL 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446985501  81 TGKKVAVFGSGDTAYELFCEAVTIFEERLVKCGAELVQEGLKIELAPEDKEDVEKCSDFAIAFAEKF 147
Cdd:PRK06703  81 SGKKVAVFGSGDTAYPLFCEAVTIFEERLVERGAELVQEGLKIELAPETDEDVEKCSNFAIAFAEKF 147
 
Name Accession Description Interval E-value
PRK06703 PRK06703
flavodoxin; Provisional
 1-147 9.76e-85

flavodoxin; Provisional


Pssm-ID: 235854 [Multi-domain]  Cd Length: 151  Bit Score: 244.67  E-value: 9.76e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   1 MAKILIAYASMSGNTESIADLIKVSLDAFDHEVVLQEMEGMDAEELLAYDGIILGSYTWGDGELPFEAEDFHDELENIDL 80
Cdd:PRK06703   1 MAKILIAYASMSGNTEDIADLIKVSLDAFDHEVVLQEMDGMDAEELLAYDGIILGSYTWGDGDLPYEAEDFHEDLENIDL 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446985501  81 TGKKVAVFGSGDTAYELFCEAVTIFEERLVKCGAELVQEGLKIELAPEDKEDVEKCSDFAIAFAEKF 147
Cdd:PRK06703  81 SGKKVAVFGSGDTAYPLFCEAVTIFEERLVERGAELVQEGLKIELAPETDEDVEKCSNFAIAFAEKF 147
flav_short TIGR01753
flavodoxin, short chain; Flavodoxins are small redox-active proteins with a flavin ...
 4-144 1.04e-44

flavodoxin, short chain; Flavodoxins are small redox-active proteins with a flavin mononucleotide (FMN) prosthetic group. They can act in nitrogen fixation by nitrogenase, in sulfite reduction, and light-dependent NADP+ reduction in during photosynthesis, among other roles. This model describes the short chain type. Many of these are involved in sulfite reduction. [Energy metabolism, Electron transport]


Pssm-ID: 273789 [Multi-domain]  Cd Length: 140  Bit Score: 143.25  E-value: 1.04e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501    4 ILIAYASMSGNTESIADLIKVSLDAFDHEVVLQEMEGMDAEELLAYDGIILGSYTWGDGELPF-EAEDFHDELENIDLTG 82
Cdd:TIGR01753   1 ILIVYASMTGNTEEMANIIAEGLKEAGAEVDLLEVADADAEDLLSYDAVLLGCSTWGDEDLEQdDFEPFFEELEDIDLGG 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446985501   83 KKVAVFGSGDTAYElFCEAVTIFEERLVKCGAELVQEGLKIELAPEDkEDVEKCSDFAIAFA 144
Cdd:TIGR01753  81 KKVALFGSGDWGYE-FCEAVDDWEERLKEAGATIIAEGLKVDGDPEE-EDLDKCREFAKDLA 140
FldA COG0716
Flavodoxin [Energy production and conversion]; Flavodoxin is part of the Pathway/BioSystem: ...
 4-140 1.50e-32

Flavodoxin [Energy production and conversion]; Flavodoxin is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440480 [Multi-domain]  Cd Length: 135  Bit Score: 111.92  E-value: 1.50e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   4 ILIAYASMSGNTESIADLIKVSLDAFDHEVVlqEMEGMDAEELLAYDGIILGSYTWGdGELPFEAEDFHDELENiDLTGK 83
Cdd:COG0716    1 ILIVYGSTTGNTEKVAEAIAEALGAAGVDLF--EIEDADLDDLEDYDLLILGTPTWA-GELPDDWEDFLEELKE-DLSGK 76

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446985501  84 KVAVFGSGDTayELFCEAVTIFEERLVKCGAELVQE-GLKIELAPEDKEDVEKCSDFA 140
Cdd:COG0716   77 KVALFGTGDS--SGYGDALGELKELLEEKGAKVVGGyDFEGSKAPDAEDTEERAEEWL 132
Flavodoxin_1 pfam00258
Flavodoxin;
6-136 2.76e-25

Flavodoxin;


Pssm-ID: 425562 [Multi-domain]  Cd Length: 142  Bit Score: 93.59  E-value: 2.76e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501    6 IAYASMSGNTESIADLIKVSLDAFDHEVVLQEMEGMDA--EELLAYDGIILGSYTWGDGELPFEAEDFHDEL------EN 77
Cdd:pfam00258   1 IFYGSQTGNTEKLAEAIAEGLGEAGFEVDVVDLDDVDEtlSEIEEEDLLLVVVSTWGEGEPPDNAKPFVDWLllfgtlED 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 446985501   78 IDLTGKKVAVFGSGDTAYELFCEAVTIFEERLVKCGAELVQEGLKIELAPEDkEDVEKC 136
Cdd:pfam00258  81 GDLSGLKYAVFGLGDSGYEGFCGAAKKLDEKLSELGASRVGPLGEGDEDPQE-DGLEEA 138
 
Name Accession Description Interval E-value
PRK06703 PRK06703
flavodoxin; Provisional
 1-147 9.76e-85

flavodoxin; Provisional


Pssm-ID: 235854 [Multi-domain]  Cd Length: 151  Bit Score: 244.67  E-value: 9.76e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   1 MAKILIAYASMSGNTESIADLIKVSLDAFDHEVVLQEMEGMDAEELLAYDGIILGSYTWGDGELPFEAEDFHDELENIDL 80
Cdd:PRK06703   1 MAKILIAYASMSGNTEDIADLIKVSLDAFDHEVVLQEMDGMDAEELLAYDGIILGSYTWGDGDLPYEAEDFHEDLENIDL 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446985501  81 TGKKVAVFGSGDTAYELFCEAVTIFEERLVKCGAELVQEGLKIELAPEDKEDVEKCSDFAIAFAEKF 147
Cdd:PRK06703  81 SGKKVAVFGSGDTAYPLFCEAVTIFEERLVERGAELVQEGLKIELAPETDEDVEKCSNFAIAFAEKF 147
flav_short TIGR01753
flavodoxin, short chain; Flavodoxins are small redox-active proteins with a flavin ...
 4-144 1.04e-44

flavodoxin, short chain; Flavodoxins are small redox-active proteins with a flavin mononucleotide (FMN) prosthetic group. They can act in nitrogen fixation by nitrogenase, in sulfite reduction, and light-dependent NADP+ reduction in during photosynthesis, among other roles. This model describes the short chain type. Many of these are involved in sulfite reduction. [Energy metabolism, Electron transport]


Pssm-ID: 273789 [Multi-domain]  Cd Length: 140  Bit Score: 143.25  E-value: 1.04e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501    4 ILIAYASMSGNTESIADLIKVSLDAFDHEVVLQEMEGMDAEELLAYDGIILGSYTWGDGELPF-EAEDFHDELENIDLTG 82
Cdd:TIGR01753   1 ILIVYASMTGNTEEMANIIAEGLKEAGAEVDLLEVADADAEDLLSYDAVLLGCSTWGDEDLEQdDFEPFFEELEDIDLGG 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446985501   83 KKVAVFGSGDTAYElFCEAVTIFEERLVKCGAELVQEGLKIELAPEDkEDVEKCSDFAIAFA 144
Cdd:TIGR01753  81 KKVALFGSGDWGYE-FCEAVDDWEERLKEAGATIIAEGLKVDGDPEE-EDLDKCREFAKDLA 140
PRK06756 PRK06756
flavodoxin; Provisional
 1-145 9.45e-44

flavodoxin; Provisional


Pssm-ID: 168663 [Multi-domain]  Cd Length: 148  Bit Score: 140.78  E-value: 9.45e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   1 MAKILIAYASMSGNTESIADLIKVSLDAFDHEV-VLQEMEGMDAEELLAYDGIILGSYTWGDGELPFEAEDFHDELENID 79
Cdd:PRK06756   1 MSKLVMIFASMSGNTEEMADHIAGVIRETENEIeVIDIMDSPEASILEQYDGIILGAYTWGDGDLPDDFLDFYDAMDSID 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446985501  80 LTGKKVAVFGSGDTAYELFCEAVTIFEERLVKCGAELVQEGLKIELAPEDkEDVEKCSDFAIAFAE 145
Cdd:PRK06756  81 LTGKKAAVFGSCDSAYPKYGVAVDILIEKLQERGAAVVLEGLKVELTPED-EDVEKCLQFGAEFVK 145
PRK07308 PRK07308
flavodoxin; Validated
 1-147 9.96e-36

flavodoxin; Validated


Pssm-ID: 180922 [Multi-domain]  Cd Length: 146  Bit Score: 120.67  E-value: 9.96e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   1 MAKILIAYASMSGNTESIADLIKVSLDAFDHEVVLQEMEGMDAEELLAYDGIILGSYTWGDGELPFEAEDFHDELENIDL 80
Cdd:PRK07308   1 MALAKIVYASMTGNTEEIADIVADKLRELGHDVDVDECTTVDASDFEDADIAIVATYTYGDGELPDEIVDFYEDLADLDL 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446985501  81 TGKKVAVFGSGDTAYELFCEAVTIFEERLVKCGAELVQEGLKIELAPEDkEDVEKCSDFAIAFAEKF 147
Cdd:PRK07308  81 SGKIYGVVGSGDTFYDYFCKSVDDFEAQFALTGATKGAESVKVDLAAED-EDIERLEAFAEELAAKV 146
FldA COG0716
Flavodoxin [Energy production and conversion]; Flavodoxin is part of the Pathway/BioSystem: ...
 4-140 1.50e-32

Flavodoxin [Energy production and conversion]; Flavodoxin is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440480 [Multi-domain]  Cd Length: 135  Bit Score: 111.92  E-value: 1.50e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   4 ILIAYASMSGNTESIADLIKVSLDAFDHEVVlqEMEGMDAEELLAYDGIILGSYTWGdGELPFEAEDFHDELENiDLTGK 83
Cdd:COG0716    1 ILIVYGSTTGNTEKVAEAIAEALGAAGVDLF--EIEDADLDDLEDYDLLILGTPTWA-GELPDDWEDFLEELKE-DLSGK 76

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446985501  84 KVAVFGSGDTayELFCEAVTIFEERLVKCGAELVQE-GLKIELAPEDKEDVEKCSDFA 140
Cdd:COG0716   77 KVALFGTGDS--SGYGDALGELKELLEEKGAKVVGGyDFEGSKAPDAEDTEERAEEWL 132
PRK09267 PRK09267
flavodoxin FldA; Validated
 1-117 4.99e-30

flavodoxin FldA; Validated


Pssm-ID: 236439 [Multi-domain]  Cd Length: 169  Bit Score: 106.45  E-value: 4.99e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   1 MAKILIAYASMSGNTESIADLIKVSLDafDHEVVLQEMEGMDAEELLAYDGIILGSYTWGDGELPFEAEDFHDELENIDL 80
Cdd:PRK09267   1 MAKIGIFFGSDTGNTEDIAKMIQKKLG--KDVADVVDIAKASKEDFEAYDLLILGIPTWGYGELQCDWDDFLPELEEIDF 78

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 446985501  81 TGKKVAVFGSGD-TAY-ELFCEAVTIFEERLVKCGAELV 117
Cdd:PRK09267  79 SGKKVALFGLGDqEDYaEYFCDAMGTLYDIVEPRGATIV 117
Flavodoxin_1 pfam00258
Flavodoxin;
6-136 2.76e-25

Flavodoxin;


Pssm-ID: 425562 [Multi-domain]  Cd Length: 142  Bit Score: 93.59  E-value: 2.76e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501    6 IAYASMSGNTESIADLIKVSLDAFDHEVVLQEMEGMDA--EELLAYDGIILGSYTWGDGELPFEAEDFHDEL------EN 77
Cdd:pfam00258   1 IFYGSQTGNTEKLAEAIAEGLGEAGFEVDVVDLDDVDEtlSEIEEEDLLLVVVSTWGEGEPPDNAKPFVDWLllfgtlED 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 446985501   78 IDLTGKKVAVFGSGDTAYELFCEAVTIFEERLVKCGAELVQEGLKIELAPEDkEDVEKC 136
Cdd:pfam00258  81 GDLSGLKYAVFGLGDSGYEGFCGAAKKLDEKLSELGASRVGPLGEGDEDPQE-DGLEEA 138
flav_long TIGR01752
flavodoxin, long chain; Flavodoxins are small redox-active proteins with a flavin ...
 3-117 2.48e-24

flavodoxin, long chain; Flavodoxins are small redox-active proteins with a flavin mononucleotide (FMN) prosthetic group. They can act in nitrogen fixation by nitrogenase, in sulfite reduction, and light-dependent NADP+ reduction in during photosynthesis, among other roles. This model describes the long chain type, typical for nitrogen fixation but associated with pyruvate formate-lyase activation and cobalamin-dependent methionine synthase activity in E. coli. [Energy metabolism, Electron transport]


Pssm-ID: 273788 [Multi-domain]  Cd Length: 167  Bit Score: 92.04  E-value: 2.48e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501    3 KILIAYASMSGNTESIADLIKVSLDAFDHEVVlqEMEGMDAEELLAYDGIILGSYTWGDGELPFEAEDFHDELENIDLTG 82
Cdd:TIGR01752   1 KIGIFYGTDTGNTEGIAEKIQKELGEDDVDVF--NIAKASKEDLNAYDKLILGTPTWGVGELQEDWEDFLPTLEELDFTG 78

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 446985501   83 KKVAVFGSGDT-AY-ELFCEAVTIFEERLVKCGAELV 117
Cdd:TIGR01752  79 KTVALFGLGDQeGYsETFCDGMGILYDKIKARGAKVV 115
NorV COG0426
Flavorubredoxin [Energy production and conversion];
3-146 1.51e-22

Flavorubredoxin [Energy production and conversion];


Pssm-ID: 440195 [Multi-domain]  Cd Length: 390  Bit Score: 91.43  E-value: 1.51e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   3 KILIAYASMSGNTESIADLIKVSLDAFDHEVVLQEMEGMDAEELLA----YDGIILGSYTWGDGELPfEAEDFHDELENI 78
Cdd:COG0426  248 KVVIVYASMYGNTEKMAEAIAEGLTEEGVKVKLYDLEKTDPSEIITeifdAKGIVIGSPTYNGGAFP-PIADLLGYLKGL 326

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446985501  79 DLTGKKVAVFGSgdtaYELFCEAVTIFEERLVKCGAELVQEGLKIELAPeDKEDVEKCSDFAIAFAEK 146
Cdd:COG0426  327 APKNKLAGAFGS----YGWSGEAVKLLEEKLEDAGFEVVFEPLRVKFKP-TEEDLKKCEELGTDLAQK 389
PRK09271 PRK09271
flavodoxin; Provisional
 3-102 3.33e-21

flavodoxin; Provisional


Pssm-ID: 181744  Cd Length: 160  Bit Score: 83.70  E-value: 3.33e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   3 KILIAYASMSGNTESIADLIKVSLDAFDHEVVLQEMeGMD--AEELLA---YDGIILGSYTWGDGELPFEAEDFHDELen 77
Cdd:PRK09271   2 RILLAYASLSGNTREVAREIEERCEEAGHEVDWVET-DVQtlAEYPLDpedYDLYLLGTWTDNAGRTPPEMKRFIAEL-- 78

                         90       100
                 ....*....|....*....|....*....
gi 446985501  78 IDLTGK--KVAVFGSGDTAY--ELFCEAV 102
Cdd:PRK09271  79 AETIGKppNVAVFGTGETQWgeEYYCGAV 107
CysJ COG0369
Flavoprotein (flavin reductase) subunit CysJ of sulfite and N-hydroxylaminopurine reductases ...
 2-115 2.79e-18

Flavoprotein (flavin reductase) subunit CysJ of sulfite and N-hydroxylaminopurine reductases [Nucleotide transport and metabolism, Inorganic ion transport and metabolism]; Flavoprotein (flavin reductase) subunit CysJ of sulfite and N-hydroxylaminopurine reductases is part of the Pathway/BioSystem: Cysteine biosynthesis


Pssm-ID: 440138 [Multi-domain]  Cd Length: 561  Bit Score: 79.81  E-value: 2.79e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   2 AKILIAYASMSGNTESIADLIKVSLDAFDHEVVLQEMEGMDAEELLAYDGIILGSYTWGDGELPFEAEDFHDELEN---I 78
Cdd:COG0369   27 TPLTILYGSQTGNAEGLAEQLAERAKAAGLAVTLASLDDYKPKDLAKEGLLLIVTSTYGEGEPPDNARAFYEFLHSkkaP 106

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 446985501  79 DLTGKKVAVFGSGDTAYELFCEAVTIFEERLVKCGAE 115
Cdd:COG0369  107 KLDGLRYAVLGLGDSSYETFCQTGKDFDARLEELGAT 143
PRK05568 PRK05568
flavodoxin; Provisional
 1-146 1.09e-14

flavodoxin; Provisional


Pssm-ID: 235508 [Multi-domain]  Cd Length: 142  Bit Score: 66.37  E-value: 1.09e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   1 MAKILIAYASMSGNTESIADLIKVSLDAFDHEVVLQEMEGMDAEELLAYDGIILGSYTWGDGEL-PFEAEDFHDELENiD 79
Cdd:PRK05568   1 MKKINIIYWSGTGNTEAMANLIAEGAKENGAEVKLLNVSEASVDDVKGADVVALGSPAMGDEVLeEGEMEPFVESISS-L 79

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501  80 LTGKKVAVFGS---GDTayelfcEAVTIFEERLVKCGAELVQEGLKIELAPEDkEDVEKCSDFAIAFAEK 146
Cdd:PRK05568  80 VKGKKLVLFGSygwGDG------EWMRDWVERMEGYGANLVNEGLIVNNTPEG-EGIEKCKALGEALAKA 142
PRK09004 PRK09004
FMN-binding protein MioC; Provisional
 1-129 9.33e-12

FMN-binding protein MioC; Provisional


Pssm-ID: 181608 [Multi-domain]  Cd Length: 146  Bit Score: 58.69  E-value: 9.33e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   1 MAKILIAYASMSGNTESIADLIKVSLDAFDHEVVLQ---EMEGMDAEELLaydgiILGSYTWGDGELPFEAEDFHDELE- 76
Cdd:PRK09004   1 MADITLISGSTLGGAEYVADHLAEKLEEAGFSTETLhgpLLDDLSASGLW-----LIVTSTHGAGDLPDNLQPFFEELQe 75

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446985501  77 -NIDLTGKKVAVFGSGDTAYELFCEAVTIFEERLVKCGAELVQEGLKIELA----PED 129
Cdd:PRK09004  76 qKPDLSQVRFAAIGIGSSEYDTFCGAIDKLEQLLKAKGAKQIGETLKIDVLqhpiPED 133
PRK11921 PRK11921
anaerobic nitric oxide reductase flavorubredoxin;
4-146 1.45e-11

anaerobic nitric oxide reductase flavorubredoxin;


Pssm-ID: 237023 [Multi-domain]  Cd Length: 394  Bit Score: 60.48  E-value: 1.45e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   4 ILIAYASMSGNTESIADLIKVSLDAFDHEVVLQEMEGMDAE------ELLAYDGIILGSYTWGDGELPFEAEDFhDELEN 77
Cdd:PRK11921 250 VTILYDTMWNSTRRMAEAIAEGIKKANKDVTVKLYNSAKSDkndiitEVFKSKAILVGSSTINRGILSSTAAIL-EEIKG 328

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446985501  78 IDLTGKKVAVFGSgdtaYELFCEAVTIFEERLVKCGAELVQEGLKIELAPeDKEDVEKCSDFAIAFAEK 146
Cdd:PRK11921 329 LGFKNKKAAAFGS----YGWSGESVKIITERLKKAGFEIVNDGIRELWNP-DDEALDRCRSFGENFAES 392
cysJ PRK10953
NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;
1-115 2.47e-10

NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;


Pssm-ID: 182862 [Multi-domain]  Cd Length: 600  Bit Score: 57.42  E-value: 2.47e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   1 MAKILIAYASMSGNTESIADLIKVSLDAFDHEVVL-----QEMEGMDAEELLaydgIILGSyTWGDGELPFEAEDFHDEL 75
Cdd:PRK10953  61 MPGITLISASQTGNARRVAEQLRDDLLAAKLNVNLvnagdYKFKQIAQEKLL----IVVTS-TQGEGEPPEEAVALHKFL 135

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 446985501  76 ---ENIDLTGKKVAVFGSGDTAYELFCEAVTIFEERLVKCGAE 115
Cdd:PRK10953 136 fskKAPKLENTAFAVFGLGDTSYEFFCQAGKDFDSKLAELGAE 178
HemG COG4635
Protoporphyrinogen IX oxidase, menaquinone-dependent (flavodoxin domain) [Coenzyme transport ...
 2-94 1.37e-08

Protoporphyrinogen IX oxidase, menaquinone-dependent (flavodoxin domain) [Coenzyme transport and metabolism];


Pssm-ID: 443673  Cd Length: 179  Bit Score: 51.05  E-value: 1.37e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   2 AKILIAYASMSGNTESIADLIKVSLDAFDHEVVLQEMEGMDAEELLAYDGIILGS--YTwgdGELPFEAEDF----HDEL 75
Cdd:COG4635    1 MKVLILYASRDGQTRKIAERIAEVLREAGHDVDLVDLEDAPDLDLAGYDAVVIGAsiRY---GKWLPEAVRFvrrhRDAL 77

                         90
                 ....*....|....*....
gi 446985501  76 ENidltgKKVAVFGSGDTA 94
Cdd:COG4635   78 AA-----RPVAFFSVSLTA 91
PRK12359 PRK12359
flavodoxin FldB; Provisional
 3-117 3.36e-08

flavodoxin FldB; Provisional


Pssm-ID: 183471 [Multi-domain]  Cd Length: 172  Bit Score: 49.95  E-value: 3.36e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   3 KILIAYASMSGNTESIADLIKvslDAFDHEVV-LQEMEGMDAEELLAYDGIILGSYTWGDGELPFEAEDFHDELENIDLT 81
Cdd:PRK12359   2 KIGLFYGSSTCYTEMAAEKIR---DIIGEELVdLHNLKDDPPKLMEQYDVLILGIPTWDFGEIQEDWEAVWDQLDDLNLE 78

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 446985501  82 GKKVAVFGSGDT-AY-ELFCEAVTIFEERLVKCGAELV 117
Cdd:PRK12359  79 GKIVALYGMGDQlGYgEWFLDALGMLHDKLAPKGVKFV 116
PRK05569 PRK05569
flavodoxin; Provisional
 1-90 1.35e-05

flavodoxin; Provisional


Pssm-ID: 135442 [Multi-domain]  Cd Length: 141  Bit Score: 42.13  E-value: 1.35e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   1 MAKILIAYASMSGNTESIADLIKVSLDAFDHEVVLQEMEGMDAEELLAYDGIILGSYTWGDGEL-PFEAEDFHDELENID 79
Cdd:PRK05569   1 MKKVSIIYWSCGGNVEVLANTIADGAKEAGAEVTIKHVADAKVEDVLEADAVAFGSPSMDNNNIeQEEMAPFLDQFKLTP 80

                         90
                 ....*....|.
gi 446985501  80 LTGKKVAVFGS 90
Cdd:PRK05569  81 NENKKCILFGS 91
PRK08105 PRK08105
flavodoxin; Provisional
 1-131 2.67e-05

flavodoxin; Provisional


Pssm-ID: 181230 [Multi-domain]  Cd Length: 149  Bit Score: 41.41  E-value: 2.67e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   1 MAKILIAYASMSGNTESIADLIKVSLDAFDHEVVLQEMEGMDAEELLAYDGIILGSYTWGDGELPFEAEDFHDELENID- 79
Cdd:PRK08105   1 MAKVGIFVGTVYGNALLVAEEAEAILTAQGHEVTLFEDPELSDWQPYQDELVLVVTSTTGQGDLPDSIVPLFQALKDTAg 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 446985501  80 -LTGKKVAVFGSGDTAYELFCEAVTIFEERLVKCGAELVQEGLKIElAPEDKE 131
Cdd:PRK08105  81 yQPNLRYGVIALGDSSYDNFCGAGKQFDALLQEQGAKRVGERLEID-ACETPE 132
PRK05452 PRK05452
anaerobic nitric oxide reductase flavorubredoxin; Provisional
 3-138 2.82e-05

anaerobic nitric oxide reductase flavorubredoxin; Provisional


Pssm-ID: 235475 [Multi-domain]  Cd Length: 479  Bit Score: 42.44  E-value: 2.82e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   3 KILIAYASMSGNTESIADLIKVSLDAFDHEVVLQ--EMEGMDAEELLAY----DGIILGSYTWGDGELPFEAeDFHDELE 76
Cdd:PRK05452 253 RITIFYDTMSNNTRMMADAIAQGIAEVDPRVAVKifNVARSDKNEILTNvfrsKGVLVGSSTMNNVMMPKIA-GLLEEIT 331

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446985501  77 NIDLTGKKVAVFGSgdtaYELFCEAVTIFEERLVKCGAElVQEGLKIELAPeDKEDVEKCSD 138
Cdd:PRK05452 332 GLRFRNKRASAFGS----HGWSGGAVDRLSTRLQDAGFE-MSLSLKAKWRP-DQDALELCRE 387
gltD PRK12810
glutamate synthase subunit beta; Reviewed
 41-94 2.99e-05

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 42.46  E-value: 2.99e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446985501  41 MDAEELLA-YDGIIL--GSYTWGDgeLPFEAEDF---HDELE----------------NIDLTGKKVAVFGSGDTA 94
Cdd:PRK12810 220 ITAEELLAeYDAVFLgtGAYKPRD--LGIPGRDLdgvHFAMDfliqntrrvlgdetepFISAKGKHVVVIGGGDTG 293
PRK06242 PRK06242
flavodoxin; Provisional
 3-88 5.11e-05

flavodoxin; Provisional


Pssm-ID: 180484 [Multi-domain]  Cd Length: 150  Bit Score: 40.67  E-value: 5.11e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   3 KILIAYASMS-GNTESIADLIKVSLDAfdhEVVlqEMEGMDAEELLAYDGIILGS--YTWGdgelpfeaedFHDEL---- 75
Cdd:PRK06242   2 KALIVYASVHhGNTEKIAKAIAEVLDA---EVI--DPGDVNPEDLSEYDLIGFGSgiYFGK----------FHKSLlkli 66

                         90
                 ....*....|....
gi 446985501  76 -ENIDLTGKKVAVF 88
Cdd:PRK06242  67 eKLPPVSGKKAFIF 80
Flavodoxin_5 pfam12724
Flavodoxin domain; This is a family of flavodoxins. Flavodoxins are electron transfer proteins ...
 5-94 3.39e-04

Flavodoxin domain; This is a family of flavodoxins. Flavodoxins are electron transfer proteins that carry a molecule of non-covalently bound FMN.


Pssm-ID: 463681 [Multi-domain]  Cd Length: 144  Bit Score: 38.40  E-value: 3.39e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501    5 LIAYASMSGNTESIADLIKVSLDAFDHEVVLqeMEGMDAEELLAYDGIILGSYTWGdGELPFEAEDF---HDEleniDLT 81
Cdd:pfam12724   1 LILYSSRDGQTKKIAERIAEELREEGELVDV--EDVEAGEDLSSYDAVVIGASIYY-GKHLPELRQFvtkHRD----ELS 73

                          90
                  ....*....|...
gi 446985501   82 GKKVAVFGSGDTA 94
Cdd:pfam12724  74 SKPVAFFSVNLTA 86
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 41-108 4.89e-04

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 38.96  E-value: 4.89e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501  41 MDAEELLA-YDGIILGSYTWGDGELPFEAED---------------FHDELENIDLTGKKVAVFGSGDTAYE-------L 97
Cdd:COG0493  198 ITLDELLEeFDAVFLATGAGKPRDLGIPGEDlkgvhsamdfltavnLGEAPDTILAVGKRVVVIGGGNTAMDcartalrL 277

                         90
                 ....*....|.
gi 446985501  98 FCEAVTIFEER 108
Cdd:COG0493  278 GAESVTIVYRR 288
Flavodoxin_3 pfam12641
Flavodoxin domain; This family represents a flavodoxin domain.
 5-95 1.67e-03

Flavodoxin domain; This family represents a flavodoxin domain.


Pssm-ID: 432690  Cd Length: 159  Bit Score: 36.48  E-value: 1.67e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501    5 LIAYASMSGNTESIADLIkvsldafdHEVVLQEMEGMDAEEL----LAYDGIILGsyTWGD-GELPFEAEDFhdeLENID 79
Cdd:pfam12641   1 LILYSSLTGNTKKVAEAI--------FEALPEEKDIIDFGELkdkiPEYDIVFVG--FWVDkGNADEEALDF---LETLK 67

                          90       100
                  ....*....|....*....|
gi 446985501   80 ltGKKVAVFG----SGDTAY 95
Cdd:pfam12641  68 --NKKIFLFGtlgaGPDSEY 85
WrbA COG0655
Multimeric flavodoxin WrbA, includes NAD(P)H:quinone oxidoreductase [Energy production and ...
 3-59 5.64e-03

Multimeric flavodoxin WrbA, includes NAD(P)H:quinone oxidoreductase [Energy production and conversion];


Pssm-ID: 440420 [Multi-domain]  Cd Length: 181  Bit Score: 35.29  E-value: 5.64e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446985501   3 KILIAYASMS--GNTESIADLIKVSLDAFDHEVVLQEMEGMD----------------------AEELLAYDGIILGSYT 58
Cdd:COG0655    1 KILVINGSPRknGNTAALAEAVAEGAEEAGAEVELIRLADLDikpcigcggtgkcvikddmnaiYEKLLEADGIIFGSPT 80


                 .
gi 446985501  59 W 59
Cdd:COG0655   81 Y 81
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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