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Conserved domains on  [gi|489496907|ref|WP_003401821|]
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MULTISPECIES: molecular chaperone DnaJ [Mycobacterium]

Protein Classification

molecular chaperone DnaJ( domain architecture ID 11487200)

molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK14279 PRK14279
molecular chaperone DnaJ;
1-393 0e+00

molecular chaperone DnaJ;


:

Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 657.58  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   1 MAQREWVEKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKEYDETRRLFAG 80
Cdd:PRK14279   1 MAQREWVEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  81 GGFGGRRFDSGFGGGFGGFGVGGdgAEFNLNDLFDAASRTGGTTIGDLFGGL-FGRGGSARPSRPRRGNDLETETELDFV 159
Cdd:PRK14279  81 GGFGGRRFDGGGGFGGFGTGGDG--AEFNLNDLFDAAGRGGGGGIGDLFGGLfNRGGGSARPSRPRRGNDLETETTLDFV 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 160 EAAKGVAMPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQGAFGFSEPCTDCRGSGSIIEHPCEECKGTGVT 239
Cdd:PRK14279 159 EAAKGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEECKGTGVT 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 240 TRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLD 319
Cdd:PRK14279 239 TRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLD 318
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489496907 320 GTVGVRVPKGTADGRILRVRGRGVPKRSGGSGDLLVTVKVAVPPNLAGAAQEALEAYAAAERSSGFNPRAGWAG 393
Cdd:PRK14279 319 GPVGVKVPAGTADGRILRVRGRGVPKRSGGAGDLLVTVKVAVPPNLDGAAAEALEAYAEAERASGFDPRAGWAG 392
 
Name Accession Description Interval E-value
PRK14279 PRK14279
molecular chaperone DnaJ;
1-393 0e+00

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 657.58  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   1 MAQREWVEKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKEYDETRRLFAG 80
Cdd:PRK14279   1 MAQREWVEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  81 GGFGGRRFDSGFGGGFGGFGVGGdgAEFNLNDLFDAASRTGGTTIGDLFGGL-FGRGGSARPSRPRRGNDLETETELDFV 159
Cdd:PRK14279  81 GGFGGRRFDGGGGFGGFGTGGDG--AEFNLNDLFDAAGRGGGGGIGDLFGGLfNRGGGSARPSRPRRGNDLETETTLDFV 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 160 EAAKGVAMPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQGAFGFSEPCTDCRGSGSIIEHPCEECKGTGVT 239
Cdd:PRK14279 159 EAAKGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEECKGTGVT 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 240 TRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLD 319
Cdd:PRK14279 239 TRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLD 318
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489496907 320 GTVGVRVPKGTADGRILRVRGRGVPKRSGGSGDLLVTVKVAVPPNLAGAAQEALEAYAAAERSSGFNPRAGWAG 393
Cdd:PRK14279 319 GPVGVKVPAGTADGRILRVRGRGVPKRSGGAGDLLVTVKVAVPPNLDGAAAEALEAYAEAERASGFDPRAGWAG 392
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
10-365 3.00e-142

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 408.53  E-value: 3.00e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   10 DFYQELGVSSDASPEEIKRAYRKLARDLHPDANPgNPAAGERFKAVSEAHNVLSDPAKRKEYDET-RRLFAGGGFGGRRF 88
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFgHAGFNGGGGGGGGG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   89 DSGFGGGFGGFgvggdgaefnLNDLF-DAASRTGGTtigdlfgglfgrgGSARPSRPRRGNDLETETELDFVEAAKGVAM 167
Cdd:TIGR02349  80 FNGFDIGFFGD----------FGDIFgDFFGGGGGS-------------GRRRRSGPRRGEDLRYDLELTFEEAVFGVEK 136
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  168 PLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQ----GAFGFSEPCTDCRGSGSIIEHPCEECKGTGVTTRTR 243
Cdd:TIGR02349 137 EIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQgtpfGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERK 216
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  244 TINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGTVG 323
Cdd:TIGR02349 217 TITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVK 296
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 489496907  324 VRVPKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVPPNL 365
Cdd:TIGR02349 297 LKIPAGTQSGTVFRLKGKGVPRlRGNGRGDLLVTVKVETPKNL 339
DnaJ_C pfam01556
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ...
150-362 3.89e-85

DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.


Pssm-ID: 460251 [Multi-domain]  Cd Length: 213  Bit Score: 257.95  E-value: 3.89e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  150 LETETELDFVEAAKGVAMPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQGAFGFSEPCTDCRGSGSIIEHP 229
Cdd:pfam01556   1 LEYELELTLEEAYFGCTKKIKITRNVICDTCGGSGAKPGTSPKTCPCCGGGGQVRRQFGFFSTCTCCPCCGGGGKIIDKC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  230 CEeCKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELAL 309
Cdd:pfam01556  81 CK-CCGGGGVVEKKTLEVKIPAGVDDGQRIRLRGEGDAGENGGPPGDLYVVIRVKPHPVFRRDGDDLYCTVPISLTEALL 159
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 489496907  310 GSTLSVPTLDGTVGVRVPKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVP 362
Cdd:pfam01556 160 GGTIEVPTLDGKVKLKIPAGTQPGTVLRLKGKGMPRlKGGGRGDLYVTVKVEVP 213
DnaJ_C cd10747
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ...
245-365 2.46e-57

C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.


Pssm-ID: 199909 [Multi-domain]  Cd Length: 158  Bit Score: 184.55  E-value: 2.46e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 245 INVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGTVGV 324
Cdd:cd10747   37 LTVKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLYCEVPISLTEALLGGEIEVPTLGGKVKL 116
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 489496907 325 RVPKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVPPNL 365
Cdd:cd10747  117 KIPPGTQPGTVLRLKGKGMPRlRGGGRGDLYVEVKVEFPKKL 158
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
10-76 3.95e-34

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 123.66  E-value: 3.95e-34
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489496907  10 DFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKEYDETRR 76
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGH 67
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
9-357 5.17e-24

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 102.98  E-value: 5.17e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   9 KDFYQELGVSSDASPEEIKRAYRKLARDLHPDANpGNPAAGERFKAVSEAHNVLSDPAKRKEYD------ETRR------ 76
Cdd:NF037946   5 RDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN-KAPDAAEIFAEINEAYEVLSNPEKRANYDkyghdgVDGEggfgfd 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  77 -------LFAGGGFGGRRFDSGFGGGFGGFGVGGDGAEFNLNDLFDAASRTGGTT----IGDlfgglfgrggsarpsrPR 145
Cdd:NF037946  84 afdvfssFFETINKSGAFLDDSVDESVSADDDLDRLFDDSKEPSFTSGLDEIVQFweafIGN----------------PD 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 146 RG-----ND--LETETELDFVEAAKGVAMPLRLTSPA-------------------PCTNCHGSGARPGT--SPKVCPTC 197
Cdd:NF037946 148 YGyydenNEwnLILDKNLFTPESVIPTKNTDLVTKKDdivvenfdnlnettyksivDLLNNETSGTLALKdgNKETINIS 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 198 NGSGVINRNQ-----GAFGFS--------------EPCTDCR-----------------------GSGSIIEHPCEECKG 235
Cdd:NF037946 228 NPTVLSKNLEfdeqtEKLDFSklflrkqlprisetEVVEQPItnlqepnlniiyevkipqillfnNATKRIKYTRNDCKG 307
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 236 TGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAgLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSV 315
Cdd:NF037946 308 KSYTKEQITLDIQLPITDKLKLSVNYPGFGHI-VGSKTKGDLTIVFKVIKSKFFKLKKNDIHTAALVDPLVAYNGGEILV 386
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*....
gi 489496907 316 PTLDGTVGVRVPKGTADGRILRVRGRGVP-------KRSGGSGDLLVTV 357
Cdd:NF037946 387 PTPNQLIKVKIDPGTKNNDQIIIKGLGLParydvvtKTKYDQGDLIIHV 435
DnaJ smart00271
DnaJ molecular chaperone homology domain;
9-67 1.31e-21

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 87.29  E-value: 1.31e-21
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907     9 KDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNP-AAGERFKAVSEAHNVLSDPAK 67
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKeEAEEKFKEINEAYEVLSDPEK 60
 
Name Accession Description Interval E-value
PRK14279 PRK14279
molecular chaperone DnaJ;
1-393 0e+00

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 657.58  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   1 MAQREWVEKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKEYDETRRLFAG 80
Cdd:PRK14279   1 MAQREWVEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  81 GGFGGRRFDSGFGGGFGGFGVGGdgAEFNLNDLFDAASRTGGTTIGDLFGGL-FGRGGSARPSRPRRGNDLETETELDFV 159
Cdd:PRK14279  81 GGFGGRRFDGGGGFGGFGTGGDG--AEFNLNDLFDAAGRGGGGGIGDLFGGLfNRGGGSARPSRPRRGNDLETETTLDFV 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 160 EAAKGVAMPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQGAFGFSEPCTDCRGSGSIIEHPCEECKGTGVT 239
Cdd:PRK14279 159 EAAKGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEECKGTGVT 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 240 TRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLD 319
Cdd:PRK14279 239 TRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLD 318
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489496907 320 GTVGVRVPKGTADGRILRVRGRGVPKRSGGSGDLLVTVKVAVPPNLAGAAQEALEAYAAAERSSGFNPRAGWAG 393
Cdd:PRK14279 319 GPVGVKVPAGTADGRILRVRGRGVPKRSGGAGDLLVTVKVAVPPNLDGAAAEALEAYAEAERASGFDPRAGWAG 392
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
10-365 3.00e-142

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 408.53  E-value: 3.00e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   10 DFYQELGVSSDASPEEIKRAYRKLARDLHPDANPgNPAAGERFKAVSEAHNVLSDPAKRKEYDET-RRLFAGGGFGGRRF 88
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFgHAGFNGGGGGGGGG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   89 DSGFGGGFGGFgvggdgaefnLNDLF-DAASRTGGTtigdlfgglfgrgGSARPSRPRRGNDLETETELDFVEAAKGVAM 167
Cdd:TIGR02349  80 FNGFDIGFFGD----------FGDIFgDFFGGGGGS-------------GRRRRSGPRRGEDLRYDLELTFEEAVFGVEK 136
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  168 PLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQ----GAFGFSEPCTDCRGSGSIIEHPCEECKGTGVTTRTR 243
Cdd:TIGR02349 137 EIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQgtpfGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERK 216
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  244 TINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGTVG 323
Cdd:TIGR02349 217 TITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVK 296
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 489496907  324 VRVPKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVPPNL 365
Cdd:TIGR02349 297 LKIPAGTQSGTVFRLKGKGVPRlRGNGRGDLLVTVKVETPKNL 339
PRK14295 PRK14295
molecular chaperone DnaJ;
1-390 6.70e-142

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 409.24  E-value: 6.70e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   1 MAQREWVEKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKEYDETRRLFAG 80
Cdd:PRK14295   1 MSTKDYIEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  81 GGFGGRRFdsgfgggfggfGVGGDGAEFNLNDLFDAASRTGGTTIGDLFGGLFGR---GGSARPSRPRRGNDLETETELD 157
Cdd:PRK14295  81 GGFRPGPG-----------GGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGglfNRGGRRTQPRRGADVESEVTLS 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 158 FVEAAKGVAMPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQGAFGFSEPCTDCRGSGSIIEHPCEECKGTG 237
Cdd:PRK14295 150 FTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSG 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 238 VTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPT 317
Cdd:PRK14295 230 RAKSSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPT 309
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489496907 318 LDG-TVGVRVPKGTADGRILRVRGRGVPKRSGGSGDLLVTVKVAVPPNLAGAAQEALEAYAAAerSSGFNPRAG 390
Cdd:PRK14295 310 LGGpPVTVKLPPGTPNGRVLRVRGKGAVRKDGTRGDLLVTVEVAVPKDLSGKAREALEAFREA--TADEDPRAE 381
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
1-365 1.32e-123

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 361.77  E-value: 1.32e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   1 MAQRewvekDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKEYD-------E 73
Cdd:PRK10767   1 MAKR-----DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDqyghaafE 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  74 TRRLFAGGGFGGRRFDSgfgggfggfgvggdgaeFN--LNDLFdaasrtGGttigdlfgglfgrGGSARPSRPRRGNDLE 151
Cdd:PRK10767  76 QGGGGGGFGGGGGFGDI-----------------FGdiFGDIF------GG-------------GRGGGRQRARRGADLR 119
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 152 TETELDFVEAAKGVAMPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQGAFGFSEPCTDCRGSGSIIEHPCE 231
Cdd:PRK10767 120 YNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIKDPCK 199
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 232 ECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGS 311
Cdd:PRK10767 200 KCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGG 279
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 489496907 312 TLSVPTLDGTVGVRVPKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVPPNL 365
Cdd:PRK10767 280 EIEVPTLDGRVKLKIPEGTQTGKLFRLRGKGVKSvRSGARGDLYCQVVVETPVNL 334
PRK14280 PRK14280
molecular chaperone DnaJ;
1-365 1.45e-104

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 313.58  E-value: 1.45e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   1 MAQRewvekDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPgNPAAGERFKAVSEAHNVLSDPAKRKEYDEtrrlFAG 80
Cdd:PRK14280   1 MAKR-----DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQ----FGH 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  81 GgfggrrfDSGFGGGFGGFGVGGDGAEFNLNDLFDAASRTGGttigdlfgglfgrgGSARPSRPRRGNDLETETELDFVE 160
Cdd:PRK14280  71 A-------GPNQGFGGGGFGGGDFGGGFGFEDIFSSFFGGGG--------------RRRDPNAPRQGADLQYTMTLTFEE 129
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 161 AAKGVAMPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQGA-FG---FSEPCTDCRGSGSIIEHPCEECKGT 236
Cdd:PRK14280 130 AVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTpFGrvvNRQTCPHCNGTGQEIKEKCPTCHGK 209
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 237 GVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVP 316
Cdd:PRK14280 210 GKVRKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVP 289
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|
gi 489496907 317 TLDGTVGVRVPKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVPPNL 365
Cdd:PRK14280 290 TLHGKVKLKIPAGTQTGTQFRLKGKGVPNvRGYGQGDQYVVVRVVTPTKL 339
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
7-365 4.69e-102

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 307.05  E-value: 4.69e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   7 VEKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKEYDEtrrlFAGGGFGGR 86
Cdd:PRK14301   2 SQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDR----FGHAGVNGN 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  87 RFDSGFGggfggfgvggdgaefNLNDLFDAASRTGGTTIGdlfgglFGRGGSARPSRPRRGNDLETETELDFVEAAKGVA 166
Cdd:PRK14301  78 GGFGGFS---------------SAEDIFSHFSDIFGDLFG------FSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDE 136
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 167 MPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQGAFGFSEPCTDCRGSGSIIEHPCEECKGTGVTTRTRTIN 246
Cdd:PRK14301 137 VTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELK 216
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 247 VRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGTVGVRV 326
Cdd:PRK14301 217 VRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTLDI 296
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|
gi 489496907 327 PKGTADGRILRVRGRGVPKR-SGGSGDLLVTVKVAVPPNL 365
Cdd:PRK14301 297 PKGTQSGEVFRLRGKGLPYLgSSQKGDLLVEVSVVTPTKL 336
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
7-365 9.84e-100

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 300.91  E-value: 9.84e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   7 VEKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKEYDETrrlfagggfggr 86
Cdd:PRK14294   2 VKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQY------------ 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  87 rfdsgfgggfggFGVGGDGAEFNLNDLFDAASRTGGTTIGDLFGGLFGRGGSARpSRPRRGNDLETETELDFVEAAKGVA 166
Cdd:PRK14294  70 ------------GHEGLSGTGFSGFSGFDDIFSSFGDIFEDFFGFGGGRRGRSR-TAVRAGADLRYDLTLPFLEAAFGTE 136
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 167 MPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQGAFGFSEPCTDCRGSGSIIEHPCEECKGTGVTTRTRTIN 246
Cdd:PRK14294 137 KEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQ 216
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 247 VRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGTVGVRV 326
Cdd:PRK14294 217 VKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKI 296
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|
gi 489496907 327 PKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVPPNL 365
Cdd:PRK14294 297 PKGTQPGDIFRFKGKGIPSlRGGGRGDQIIEVEVKVPTRL 336
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
8-365 3.01e-98

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 297.38  E-value: 3.01e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   8 EKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPgNPAAGERFKAVSEAHNVLSDPAKRKEYDEtrrlFAGGGFGGRR 87
Cdd:PRK14276   3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQKRAAYDQ----YGAAGANGGF 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  88 FDSGFGGGFggfgvggdgaefnlndlFDAASRTGGttIGDLFGGLFGRGGSAR-PSRPRRGNDLETETELDFVEAAKGVA 166
Cdd:PRK14276  78 GGGAGGFGG-----------------FDGSGGFGG--FEDIFSSFFGGGGARRnPNAPRQGDDLQYRVNLDFEEAIFGKE 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 167 MPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQ----GAFGFSEPCTDCRGSGSIIEHPCEECKGTGVTTRT 242
Cdd:PRK14276 139 KEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTqtplGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQA 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 243 RTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGTV 322
Cdd:PRK14276 219 HTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDV 298
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....
gi 489496907 323 GVRVPKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVPPNL 365
Cdd:PRK14276 299 ELKIPAGTQTGKKFRLRGKGAPKlRGGGNGDQHVTVNIVTPTKL 342
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
8-365 4.67e-98

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 297.12  E-value: 4.67e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   8 EKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPgNPAAGERFKAVSEAHNVLSDPAKRKEYDEtrrlFAGGGFGGRR 87
Cdd:PRK14283   4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSE-EEGAEEKFKEISEAYAVLSDDEKRQRYDQ----FGHAGMDGFS 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  88 FDSGFGggfggfgvggdgaEFNLNDLFDAAsrtgGTTIGDLFGGLFGRGGSARPsrPRRGNDLETETELDFVEAAKGVAM 167
Cdd:PRK14283  79 QEDIFN-------------NINFEDIFQGF----GFGIGNIFDMFGFGGGSRHG--PQRGADIYTEVEITLEEAASGVEK 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 168 PLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSG----VINRNQGAFGFSEPCTDCRGSGSIIEHPCEECKGTGVTTRTR 243
Cdd:PRK14283 140 DIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGqvkqVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETK 219
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 244 TINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGTVG 323
Cdd:PRK14283 220 TISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVE 299
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 489496907 324 VRVPKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVPPNL 365
Cdd:PRK14283 300 LKIPAGTQSGTTFRLKGHGMPSlRWSGKGNLYVKVKVVVPKKL 342
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
1-365 6.97e-97

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 294.40  E-value: 6.97e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   1 MAQRewveKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKEYDEtrrlFAG 80
Cdd:PRK14277   1 MAAK----KDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQ----FGH 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  81 GGFGGRRFDSGFGGGFGGFGVGGDGAEFNLNDLFdaasrtgGTTIGDLFGGLFGRGGSArpsrPRRGNDLETETELDFVE 160
Cdd:PRK14277  73 AAFDPGGFGQGGFGQGGFGGGGFDFDFGGFGDIF-------EDIFGDFFGTGRRRAETG----PQKGADIRYDLELTFEE 141
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 161 AAKGVAMPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQ----GAFGFSEPCTDCRGSGSIIEHPCEECKGT 236
Cdd:PRK14277 142 AAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQntpfGRIVNIRTCDRCHGEGKIITDPCNKCGGT 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 237 GVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVP 316
Cdd:PRK14277 222 GRIRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIP 301
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|
gi 489496907 317 TLDGTVGVRVPKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVPPNL 365
Cdd:PRK14277 302 TLDGKVKFTIPEGTQTGTKFRLRGKGIPHlRGRGRGDQIVKVYIEVPKKL 351
PRK14297 PRK14297
molecular chaperone DnaJ;
9-365 4.32e-94

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 286.68  E-value: 4.32e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   9 KDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKEYDEtrrlFAGGGFggrrf 88
Cdd:PRK14297   4 KDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQ----FGTADF----- 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  89 DSGFGGGFGGFGVGGDGAEFNLNDLFDaaSRTGGTTIGdlfgglfgrgGSARPSRPRRGNDLETETELDFVEAAKGVAMP 168
Cdd:PRK14297  75 NGAGGFGSGGFGGFDFSDMGGFGDIFD--SFFGGGFGS----------SSRRRNGPQRGADIEYTINLTFEEAVFGVEKE 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 169 LRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVI--NRNQ--GAFGFSEPCTDCRGSGSIIEHPCEECKGTGVTTRTRT 244
Cdd:PRK14297 143 ISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIrvQRNTplGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRK 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 245 INVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGTVGV 324
Cdd:PRK14297 223 IKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKY 302
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|..
gi 489496907 325 RVPKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVPPNL 365
Cdd:PRK14297 303 EVPAGTQPGTVFRLKGKGVPRvNSTGRGNQYVTVIVDIPKKL 344
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
9-367 2.10e-92

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 282.51  E-value: 2.10e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   9 KDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPgNPAAGERFKAVSEAHNVLSDPAKRKEYDEtrrlFAGGGFGGrrf 88
Cdd:PRK14298   5 RDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDR----FGHAGIDN--- 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  89 dsgfgggfggfgvggdgaEFNLNDLFDAASRTGgttIGDLFGGLFGRGGSARPSRPRRGNDLETETELDFVEAAKGVAMP 168
Cdd:PRK14298  77 ------------------QYSAEDIFRGADFGG---FGDIFEMFFGGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKD 135
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 169 LRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQ----GAFGFSEPCTDCRGSGSIIEHPCEECKGTGVTTRTRT 244
Cdd:PRK14298 136 IDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRstplGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRK 215
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 245 INVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGTVGV 324
Cdd:PRK14298 216 ITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKVKM 295
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....
gi 489496907 325 RVPKGTADGRILRVRGRGVPKRSG-GSGDLLVTVKVAVPPNLAG 367
Cdd:PRK14298 296 NIPPGTQTHSVFRLKDKGMPRLHGhGKGDQLVKVIVKTPTKLTQ 339
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
9-365 5.36e-92

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 281.56  E-value: 5.36e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   9 KDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPgNPAAGERFKAVSEAHNVLSDPAKRKEYDetrrlfagggfggRRF 88
Cdd:PRK14278   3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVD-------------LGG 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  89 DSGFGGGFGGFGVGGDGAefNLNDLFDAASRTGGTTIGDLfgglfgrggsarpSRPRRGNDLETETELDFVEAAKGVAMP 168
Cdd:PRK14278  69 DPLESAGGGGGGFGGGFG--GLGDVFEAFFGGGAASRGPR-------------GRVRPGSDSLLRMRLDLEECATGVTKQ 133
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 169 LRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQGAF----GFSEPCTDCRGSGSIIEHPCEECKGTGVTTRTRT 244
Cdd:PRK14278 134 VTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFlgqvMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARRE 213
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 245 INVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTL-DGTVG 323
Cdd:PRK14278 214 ITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAIlDGPSE 293
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 489496907 324 VRVPKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVPPNL 365
Cdd:PRK14278 294 ITIPPGTQPGSVITLRGRGMPHlRSGGRGDLHAHVEVVVPTRL 336
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
8-362 7.24e-91

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 278.58  E-value: 7.24e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   8 EKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPgNPAAGERFKAVSEAHNVLSDPAKRKEYDEtrrlFAGGGFGGRR 87
Cdd:PRK14291   2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNK-NPEAEEKFKEINEAYQVLSDPEKRKLYDQ----FGHAAFSGSG 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  88 FDSGFGGGFGGFGVGgdgaefNLNDLFDAASRTGGttIGDL-FGGLFGRGGSARPSRPRRGNDLETETELDFVEAAKGVA 166
Cdd:PRK14291  77 QQQQGQEGFSDFGGG------NIEDILEDVFDIFG--FGDIfGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTT 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 167 MPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQGAFGFSEPCTDCRGSGsIIEHPCEECKGTGVTTRTRTIN 246
Cdd:PRK14291 149 VSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEG-VLREPCSKCNGRGLVIKKETIK 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 247 VRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDG-TVGVR 325
Cdd:PRK14291 228 VRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGkKEKVK 307
                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 489496907 326 VPKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVP 362
Cdd:PRK14291 308 IPPGTKEGDKIRVPGKGMPRlKGSGYGDLVVRVHIDVP 345
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
8-366 3.37e-86

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 266.47  E-value: 3.37e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   8 EKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKEYDETRRlfagggfggrr 87
Cdd:PRK14286   3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGK----------- 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  88 fdsgfGGGFGGFGVGGDGAEFNLNDLFDAASRTGGTTIGdlfGGLFGRGGSARPSRPRRGNDLETETELDFVEAAKGVAM 167
Cdd:PRK14286  72 -----AGVNAGAGGFGQGAYTDFSDIFGDFGDIFGDFFG---GGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREY 143
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 168 PLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQGAFGFSEPCTDCRGSGSIIEHPCEECKGTGVTTRTRTINV 247
Cdd:PRK14286 144 KIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINI 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 248 RIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDG-TVGVRV 326
Cdd:PRK14286 224 KIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGkKAKMKI 303
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 489496907 327 PKGTADGRILRVRGRGVPKR-SGGSGDLLVTVKVAVPPNLA 366
Cdd:PRK14286 304 PEGTESGQVFRLKGHGMPYLgAYGKGDQHVIVKIEIPKKIT 344
DnaJ_C pfam01556
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ...
150-362 3.89e-85

DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.


Pssm-ID: 460251 [Multi-domain]  Cd Length: 213  Bit Score: 257.95  E-value: 3.89e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  150 LETETELDFVEAAKGVAMPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQGAFGFSEPCTDCRGSGSIIEHP 229
Cdd:pfam01556   1 LEYELELTLEEAYFGCTKKIKITRNVICDTCGGSGAKPGTSPKTCPCCGGGGQVRRQFGFFSTCTCCPCCGGGGKIIDKC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  230 CEeCKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELAL 309
Cdd:pfam01556  81 CK-CCGGGGVVEKKTLEVKIPAGVDDGQRIRLRGEGDAGENGGPPGDLYVVIRVKPHPVFRRDGDDLYCTVPISLTEALL 159
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 489496907  310 GSTLSVPTLDGTVGVRVPKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVP 362
Cdd:pfam01556 160 GGTIEVPTLDGKVKLKIPAGTQPGTVLRLKGKGMPRlKGGGRGDLYVTVKVEVP 213
PRK14293 PRK14293
molecular chaperone DnaJ;
10-362 1.79e-83

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 259.54  E-value: 1.79e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  10 DFYQELGVSSDASPEEIKRAYRKLARDLHPDANPgNPAAGERFKAVSEAHNVLSDPAKRKEYDEtrrlF--AGGGFGGRR 87
Cdd:PRK14293   4 DYYEILGVSRDADKDELKRAYRRLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETRARYDQ----FgeAGVSGAAGF 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  88 FDSGFGGgfggfgvggdgaefNLNDLFDaasrtggtTIGDLFGGLFGRGGSARPSRPRRGNDLETETELDFVEAAKGVAM 167
Cdd:PRK14293  79 PDMGDMG--------------GFADIFE--------TFFSGFGGAGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEK 136
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 168 PLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQ----GAFGFSEPCTDCRGSGSIIEHPCEECKGTGVTTRTR 243
Cdd:PRK14293 137 EIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATrtpfGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTK 216
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 244 TINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGTVG 323
Cdd:PRK14293 217 KLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVE 296
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 489496907 324 VRVPKGTADGRILRVRGRGVPK--RSGGSGDLLVTVKVAVP 362
Cdd:PRK14293 297 LTIPAGTQPNTVLTLENKGVPRlgNPVARGDHLITVKVKIP 337
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
8-366 1.72e-81

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 254.16  E-value: 1.72e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   8 EKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGnPAAGERFKAVSEAHNVLSDPAKRKEYDEtrrlfagggfggrr 87
Cdd:PRK14287   3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-PDAEDKFKEVKEAYDTLSDPQKKAHYDQ-------------- 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  88 fdsGFGGGFGGFGVGGDGAEFN-LNDLFDAASRTGGttigdlfgglfgrgGSARPSRPRRGNDLETETELDFVEAAKGVA 166
Cdd:PRK14287  68 ---FGHTDPNQGFGGGGAGDFGgFSDIFDMFFGGGG--------------GRRNPNAPRQGADLQYTMTLEFKEAVFGKE 130
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 167 MPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQGA-FGF---SEPCTDCRGSGSIIEHPCEECKGTGVTTRT 242
Cdd:PRK14287 131 TEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTpFGRvvnRRVCHHCEGTGKIIKQKCATCGGKGKVRKR 210
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 243 RTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGTV 322
Cdd:PRK14287 211 KKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKV 290
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*
gi 489496907 323 GVRVPKGTADGRILRVRGRGVPKRSG-GSGDLLVTVKVAVPPNLA 366
Cdd:PRK14287 291 KLKIPAGTQTGTSFRLRGKGVPNVHGrGQGDQHVQVRVVTPKNLT 335
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
7-366 1.98e-80

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 251.25  E-value: 1.98e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   7 VEKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGN-PAAGERFKAVSEAHNVLSDPAKRKEYDEtrrlFAGGGFGG 85
Cdd:PRK14282   2 EKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENrKEAEQKFKEIQEAYEVLSDPQKRAMYDR----FGYVGEQP 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  86 RRFDSGFGGGFGGFGVGGDGAEFNlNDLFDaasrtggTTIGDLFGGlfgrggSARPSRPRRGNDLETETELDFVEAAKGV 165
Cdd:PRK14282  78 PYQETESGGGFFEDIFKDFENIFN-RDIFD-------IFFGERRTQ------EEQREYARRGEDIRYEIEVTLSDLINGA 143
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 166 AMPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQ----GAFGFSEPCTDCRGSGSIIEHPCEECKGTGVTTR 241
Cdd:PRK14282 144 EIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERrsffGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRR 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 242 TRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDG- 320
Cdd:PRK14282 224 RVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGg 303
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 489496907 321 TVGVRVPKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVPPNLA 366
Cdd:PRK14282 304 TTMLKIPPGTQPETVFRLKGKGLPNmRYGRRGDLIVNVHVEIPKRLS 350
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
10-366 1.24e-79

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 250.15  E-value: 1.24e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  10 DFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKEYDETRRlfagggfggrrfD 89
Cdd:PRK14284   2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGK------------D 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  90 SGFGGGFGGFGVGGDGAEFNLNDLFDA--ASRTGGTTIGDLFGGLFGRGGSAR--PSRPRRGNDLETETELDFVEAAKGV 165
Cdd:PRK14284  70 GPFAGAGGFGGAGMGNMEDALRTFMGAfgGEFGGGGSFFEGLFGGLGEAFGMRggPAGARQGASKKVHITLSFEEAAKGV 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 166 AMPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQGAFGFSEPCTDCRGSGSIIEHPCEECKGTGVTTRTRTI 245
Cdd:PRK14284 150 EKELLVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSV 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 246 NVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTL--DGTVG 323
Cdd:PRK14284 230 HVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLlkEGTCR 309
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....
gi 489496907 324 VRVPKGTADGRILRVRGRGVPKRSG-GSGDLLVTVKVAVPPNLA 366
Cdd:PRK14284 310 LTIPEGIQSGTILKVRGQGFPNVHGkGRGDLLVRISVETPQNLS 353
PRK14289 PRK14289
molecular chaperone DnaJ;
8-365 5.26e-79

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 248.21  E-value: 5.26e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   8 EKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKEYDEtrrlFAGGGFGGRR 87
Cdd:PRK14289   4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQ----FGHAGVGGAA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  88 FDSGFGGGFggfgvggdgaeFNLNDLFdaaSRTG----GTTIGDLFGGLFGRGGSARpsRPRRGNDLETETELDFVEAAK 163
Cdd:PRK14289  80 GGGGFSGEG-----------MSMEDIF---SMFGdifgGHGGGFGGFGGFGGGGSQQ--RVFRGSDLRVKVKLNLKEIST 143
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 164 GVAMPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQ----GAFGFSEPCTDCRGSGSIIEHPCEECKGTGVT 239
Cdd:PRK14289 144 GVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQntilGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIV 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 240 TRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLD 319
Cdd:PRK14289 224 YGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTID 303
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 489496907 320 GTVGVRVPKGTADGRILRVRGRGVPKRSG-GSGDLLVTVKVAVPPNL 365
Cdd:PRK14289 304 GKAKVKIEAGTQPGKVLRLRNKGLPSVNGyGTGDLLVNVSVYIPETL 350
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
8-367 1.04e-73

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 235.09  E-value: 1.04e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   8 EKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKEYDEtrrlFAGGGFggrr 87
Cdd:PRK14281   2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQ----FGHAGV---- 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  88 fdSGFGGGFGGFGVGGDGAEFN-----LNDLFDAASRTGGTTIGDLFGGLFGRGGSARPSRPRRGNDLETETELDFVEAA 162
Cdd:PRK14281  74 --GSSAASGGGPGYGGGGGDFNdifsaFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIA 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 163 KGVAMPLRLTSPAPCTNCHGSGARPGTSpKVCPTCNGSGVINRNQ----GAFGFSEPCTDCRGSGSIIEHPCEECKGTGV 238
Cdd:PRK14281 152 KGVEKTLKIKKQVPCKECNGTGSKTGAT-ETCPTCHGSGEVRQASktmfGQFVNITACPTCGGEGRVVKDRCPACYGEGI 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 239 TTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTL 318
Cdd:PRK14281 231 KQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTL 310
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|
gi 489496907 319 DGTVGVRVPKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVPPNLAG 367
Cdd:PRK14281 311 DGAVKLTIPAGTQPETMLRIPGKGIGHlRGSGRGDQYVRVNVFVPKEVSH 360
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
7-366 1.42e-73

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 233.75  E-value: 1.42e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   7 VEKDFYQELGVSSDASPEEIKRAYRKLARDLHPDaNPGNPAAGERFKAVSEAHNVLSDPAKRKEYDEtrrlfagggfggR 86
Cdd:PRK14300   1 MSQDYYQILGVSKTASQADLKKAYLKLAKQYHPD-TTDAKDAEKKFKEINAAYDVLKDEQKRAAYDR------------F 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  87 RFDSGFGGGFGGFGVGGDGAEFNLNDLFdaasrtggttiGDLFGGLFGRGGSARPSRPR-RGNDLETETELDFVEAAKGV 165
Cdd:PRK14300  68 GHDAFQNQQSRGGGGNHGGFHPDINDIF-----------GDFFSDFMGGSRRSRPTSSKvRGSDLKYNLTINLEEAFHGI 136
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 166 AMPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQGAFGFSEPCTDCRGSGSIIEHPCEECKGTGVTTRTRTI 245
Cdd:PRK14300 137 EKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNL 216
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 246 NVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLD-GTVGV 324
Cdd:PRK14300 217 SVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEgGKVNL 296
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 489496907 325 RVPKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVPPNLA 366
Cdd:PRK14300 297 TIPAGTQNGDQLRLRSKGMSKmRSTIRGDMLTHIHVEVPKNLS 339
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
10-366 2.31e-72

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 230.55  E-value: 2.31e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  10 DFYQELGVSSDASPEEIKRAYRKLARDLHPDANPgNPAAGERFKAVSEAHNVLSDPAKRKEYDetrRLFAGGGFGGRRFD 89
Cdd:PRK14292   3 DYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYD---RFGTAPGAGMPGGD 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  90 SGFGGGfggfgvggdgaeFNLNDLFD-----AASRTGGTTigdlfgglfgrggsarpSRPRRGNDLETETELDFVEAAKG 164
Cdd:PRK14292  79 PFGGMG------------FDPMDIFEqlfggAGFGGGRGR-----------------RGPARGDDLETEARITLEQARAG 129
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 165 VAMPLRLTSPAPCTNCHGSGARPGTSP-KVCPTCNGSGVIN-RNQGAFGFSE---PCTDCRGSGSIIEHPCEECKGTGVT 239
Cdd:PRK14292 130 EEVEVEVDRLTECEHCHGSRTEPGGKPpKTCPTCRGAGAVRaQARTIFGVVEtqqPCPTCRGEGQIITDPCTVCRGRGRT 209
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 240 TRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGapSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLD 319
Cdd:PRK14292 210 LKAETVKVKLPRGIDEGYRIRVAGMGNEGPGG--NGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLD 287
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*...
gi 489496907 320 GTVGVRVPKGTADGRILRVRGRGVPKRSG-GSGDLLVTVKVAVPPNLA 366
Cdd:PRK14292 288 GPQVIEVKPGTQHGDLHRLRGQGMPRLQGaGTGDLIVEYEIAVPKQLS 335
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
9-365 1.33e-64

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 210.56  E-value: 1.33e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   9 KDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPA-AGERFKAVSEAHNVLSDPAKRKEYDETRRLFAGGGFGGRR 87
Cdd:PRK14290   3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAeAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFN 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  88 FDSGFGGGfggfgvggdgaefNLNDLFDaasrtggTTIGDLFGGLFGRGGSARPSRPRRGNDLETETELDFVEAAKGVAM 167
Cdd:PRK14290  83 WDNFTHFS-------------DINDIFN-------QIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEK 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 168 PLRLTSPAPCTNCHGSGARPGTSpKVCPTCNGSGV--INRNQGAFGFSE--PCTDCRGSGSIIEHPCEECKGTGVTTRTR 243
Cdd:PRK14290 143 RIKYRRNAMCPDCSGTGAKNGKL-ITCPTCHGTGQqrIVRGQGFFRMVTvtTCRTCGGRGRIPEEKCPRCNGTGTVVVNE 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 244 TINVRIPPGVEDGQRIRLAGQGEAglRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGTVG 323
Cdd:PRK14290 222 DISVKIPKGATDNLRLRVKGKGQS--YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYN 299
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 489496907 324 VRVPKGTADGRILRVRGRGVPKRSG-GSGDLLVTVKVAVPPNL 365
Cdd:PRK14290 300 LKIPEGTQPGEVLKIKGAGMPHLNGhGSGDLLVRINVEVPKRL 342
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
7-365 4.70e-64

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 209.08  E-value: 4.70e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   7 VEKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKEYDEtrrlFAGGGFGGR 86
Cdd:PRK14285   1 MKRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDR----FGHTAFEGG 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  87 RFDSGFGGGFGGFGVGGDgaefNLNDLFDAASrTGgttigdlfgglfgRGGSARPSRPRRGNDLETETELDFVEAAKGVA 166
Cdd:PRK14285  77 GGFEGFSGGFSGFSDIFE----DFGDIFDSFF-TG-------------NRGQDKNRKHEKGQDLTYQIEISLEDAYLGYK 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 167 MPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSGVINRNQGAFGFSEPCTDCRGSGSIIEHPCEECKGTGVTTRTRTIN 246
Cdd:PRK14285 139 NNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIE 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 247 VRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTL-DGTVGVR 325
Cdd:PRK14285 219 LKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIaSKKIKIK 298
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 489496907 326 VPKGTADGRILRVRGRGVP-KRSGGSGDLLVTVKVAVPPNL 365
Cdd:PRK14285 299 IPKGTENDEQIIIKNEGMPiLHTEKFGNLILIIKIKTPKNL 339
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
8-365 1.39e-62

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 205.57  E-value: 1.39e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   8 EKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPgNPAAGERFKAVSEAHNVLSDPAKRKEYDEtrrlFAGGGFGGRR 87
Cdd:PRK14296   3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQ----FGHAAFDGSS 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  88 FDSGFGGgfggfgvggdgaefNLNDLFDAASRTGGTTIGDLFGGLFGRGGSARpSRPRRGNDLETETELDFVEAAKGVAM 167
Cdd:PRK14296  78 GFSSNFG--------------DFEDLFSNMGSSGFSSFTNIFSDFFGSNKSDY-QRSTKGQSVSLDIYLTFKELLFGVDK 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 168 PLRLTSPAPCTNCHGSGARPGTSPKVCPTCNGSG--VINRNQGAFGF--SEPCTDCRGSGSIIEHPCEECKGTGVTTRTR 243
Cdd:PRK14296 143 IIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGevLVQKNMGFFQFqqSAKCNVCNGAGKIIKNKCKNCKGKGKYLERK 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 244 TINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGR-DGDDLTVTVPVSFTELALGSTLSVPTLDGTV 322
Cdd:PRK14296 223 KIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIiNNNDILMTYNISYLDAILGNEIIIKTLDGDI 302
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*
gi 489496907 323 GVRVPKGTADGRILRVRGRGVPKR--SGGSGDLLVTVKVAVPPNL 365
Cdd:PRK14296 303 KYKLPKSINSNELIIINNKGLYKSinKDKRGDLIIKVNIVVPKNL 347
DnaJ_C cd10747
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ...
245-365 2.46e-57

C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.


Pssm-ID: 199909 [Multi-domain]  Cd Length: 158  Bit Score: 184.55  E-value: 2.46e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 245 INVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGTVGV 324
Cdd:cd10747   37 LTVKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLYCEVPISLTEALLGGEIEVPTLGGKVKL 116
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 489496907 325 RVPKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVPPNL 365
Cdd:cd10747  117 KIPPGTQPGTVLRLKGKGMPRlRGGGRGDLYVEVKVEFPKKL 158
PRK10266 PRK10266
curved DNA-binding protein;
9-391 1.02e-50

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 172.31  E-value: 1.02e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   9 KDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPgNPAAGERFKAVSEAHNVLSDPAKRKEYDETRRlfagggfggRRF 88
Cdd:PRK10266   4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQ---------HRN 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  89 DSGFGGGFGGFGVGGDGAEfNLNDLFDAA-SRTGGTTigdlfgglfgrggsaRPSRPRRGNDLETETELDFVEAAKGVAM 167
Cdd:PRK10266  74 DPQFNRQFQHGDGQSFNAE-DFDDIFSSIfGQHARQS---------------RQRPAARGHDIEIEVAVFLEETLTEHKR 137
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 168 PLRLTSPapctnchgsgarpgtspkvcptcngsgVINrnqgAFGFSEPctdcrgsgsiiEHPceeckgtgvttrtRTINV 247
Cdd:PRK10266 138 TISYNLP---------------------------VYN----AFGMIEQ-----------EIP-------------KTLNV 162
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 248 RIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGTVGVRVP 327
Cdd:PRK10266 163 KIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKESILLTIP 242
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489496907 328 KGTADGRILRVRGRG-VPKRsgGSGDLLVTVKVAVPPNlaGAAQEALEAYAAAERSSGFNPRAGW 391
Cdd:PRK10266 243 PGSQAGQRLRVKGKGlVSKK--QTGDLYAVLKIVMPPK--PDEKTAALWQQLADAQSSFDPRKDW 303
PRK14288 PRK14288
molecular chaperone DnaJ;
7-365 1.30e-48

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 168.71  E-value: 1.30e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   7 VEKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKEYDETRRlfagggfggr 86
Cdd:PRK14288   1 MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGK---------- 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  87 rfdsgfgggfgGFGVGGDGAEFNLNDLFDAASRTGGTTIGdlfgglfgrgGSARPSRPRRGN---DLETETELDFVEAAK 163
Cdd:PRK14288  71 -----------KGLNQAGASQSDFSDFFEDLGSFFEDAFG----------FGARGSKRQKSSiapDYLQTIELSFKEAVF 129
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 164 GVAMPLRLTSPAPCTNCHGSGARpGTSPKVCPTCNGSGVINRNQGAFGFSEPCTDCRGSGSIIEHPCEECKGTGVTTRTR 243
Cdd:PRK14288 130 GCKKTIKVQYQSVCESCDGTGAK-DKALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDE 208
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 244 TINVRIPPGVEDGQRIRLAGQGEAGLRGApSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDG-TV 322
Cdd:PRK14288 209 EIDAIIPEGIDDQNRMVLKNKGNEYEKGK-RGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGdEL 287
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....
gi 489496907 323 GVRVPKGTADGRILRVRGRGVPK-RSGGSGDLLVTVKVAVPPNL 365
Cdd:PRK14288 288 ELKIPRNARDRQTFAFRNEGVKHpESSYRGSLIVELQVIYPKSL 331
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
9-366 1.86e-45

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 158.18  E-value: 1.86e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   9 KDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPgNPAAGERFKAVSEAHNVLSDPAKRKEYDeTRRLFAGGGFGGRRF 88
Cdd:PRK14299   4 KDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYD-TYGTTAASAGWQGPP 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  89 DSGFGGGFGGFGVGGDGAEFnLNDLFDAASRTGGttIGDLFGGLFGrggsarpsRPRRGNDLETETELDFVEAAkgvamp 168
Cdd:PRK14299  82 PGPPGGGDFSGFNVGDFSDF-FQQLFGGRGGFGG--FGDLFGSVGR--------RARKGRDLEAELPLTLEEAY------ 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 169 lrltspapctnchgsgarpgtspkvcptcngsgvinrnqgafgfsepctdcRGSGSIIEHPCEEckgtgvttrtrtINVR 248
Cdd:PRK14299 145 ---------------------------------------------------RGGEKVVEVAGER------------LSVR 161
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 249 IPPGVEDGQRIRLAGQGEAGlrgapsGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGTVGVRVPK 328
Cdd:PRK14299 162 IPPGVREGQVIRLAGKGRQG------GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGPVEVTIPP 235
                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 489496907 329 GTADGRILRVRGRGVPKRSGGSGDLLVTVKVAVPPNLA 366
Cdd:PRK14299 236 RTQAGRKLRLKGKGWPRGPAGRGDQYAEVRITIPTRPT 273
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
2-365 1.78e-34

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 131.87  E-value: 1.78e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   2 AQREWVEKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANpGNPaagERFKAVSEAHNVLSDPAKRKEYDETRRlfAGG 81
Cdd:PTZ00037  21 RKREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKG-GDP---EKFKEISRAYEVLSDPEKRKIYDEYGE--EGL 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  82 GFGGRRFDSGfgggfggfgvggdgaefNLNDLFDAASRtggttigdlfgglfgrggsaRPSRPRRGNDLETETELDFVEA 161
Cdd:PTZ00037  95 EGGEQPADAS-----------------DLFDLIFGGGR--------------------KPGGKKRGEDIVSHLKVTLEQI 137
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 162 AKGVAMPLRLTSPAPCTNCHGSGArPGTSPKVCPTCNGSG--VINRNQGAF--GFSEPCTDCRGSGSII--EHPCEECKG 235
Cdd:PTZ00037 138 YNGAMRKLAINKDVICANCEGHGG-PKDAFVDCKLCNGQGirVQIRQMGSMihQTQSTCNSCNGQGKIIpeSKKCKNCSG 216
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 236 TGVTTRTRTINVRIPPGVEDGQRIRLagQGEAGLR-GAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLS 314
Cdd:PTZ00037 217 KGVKKTRKILEVNIDKGVPNQHKITF--HGEADEKpNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFY 294
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 489496907 315 VPTLDGTV-GVRVPKG--TADGRILRVRGRGVP--KRSGGSGDLLVTVKVAVPPNL 365
Cdd:PTZ00037 295 ITHLDGRKlLVNTPPGevVKPGDIKVINNEGMPtyKSPFKKGNLYVTFEVIFPVDR 350
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
10-76 3.95e-34

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 123.66  E-value: 3.95e-34
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489496907  10 DFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKEYDETRR 76
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGH 67
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
10-72 1.03e-31

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 114.49  E-value: 1.03e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 489496907   10 DFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKEYD 72
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
10-70 6.77e-28

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 104.31  E-value: 6.77e-28
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489496907  10 DFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSDPAKRKE 70
Cdd:COG5407    1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDPKAEERFKEINEAYELLSDAEKRAR 61
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
9-357 5.17e-24

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 102.98  E-value: 5.17e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   9 KDFYQELGVSSDASPEEIKRAYRKLARDLHPDANpGNPAAGERFKAVSEAHNVLSDPAKRKEYD------ETRR------ 76
Cdd:NF037946   5 RDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN-KAPDAAEIFAEINEAYEVLSNPEKRANYDkyghdgVDGEggfgfd 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907  77 -------LFAGGGFGGRRFDSGFGGGFGGFGVGGDGAEFNLNDLFDAASRTGGTT----IGDlfgglfgrggsarpsrPR 145
Cdd:NF037946  84 afdvfssFFETINKSGAFLDDSVDESVSADDDLDRLFDDSKEPSFTSGLDEIVQFweafIGN----------------PD 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 146 RG-----ND--LETETELDFVEAAKGVAMPLRLTSPA-------------------PCTNCHGSGARPGT--SPKVCPTC 197
Cdd:NF037946 148 YGyydenNEwnLILDKNLFTPESVIPTKNTDLVTKKDdivvenfdnlnettyksivDLLNNETSGTLALKdgNKETINIS 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 198 NGSGVINRNQ-----GAFGFS--------------EPCTDCR-----------------------GSGSIIEHPCEECKG 235
Cdd:NF037946 228 NPTVLSKNLEfdeqtEKLDFSklflrkqlprisetEVVEQPItnlqepnlniiyevkipqillfnNATKRIKYTRNDCKG 307
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907 236 TGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAgLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSV 315
Cdd:NF037946 308 KSYTKEQITLDIQLPITDKLKLSVNYPGFGHI-VGSKTKGDLTIVFKVIKSKFFKLKKNDIHTAALVDPLVAYNGGEILV 386
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*....
gi 489496907 316 PTLDGTVGVRVPKGTADGRILRVRGRGVP-------KRSGGSGDLLVTV 357
Cdd:NF037946 387 PTPNQLIKVKIDPGTKNNDQIIIKGLGLParydvvtKTKYDQGDLIIHV 435
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
10-64 4.84e-23

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 91.07  E-value: 4.84e-23
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 489496907  10 DFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNVLSD 64
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55
DnaJ_CXXCXGXG pfam00684
DnaJ central domain; The central cysteine-rich (CR) domain of DnaJ proteins contains four ...
177-234 5.20e-23

DnaJ central domain; The central cysteine-rich (CR) domain of DnaJ proteins contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DNAJ cysteine rich domain and various hydrophobic peptides has been found.


Pssm-ID: 459904 [Multi-domain]  Cd Length: 65  Bit Score: 91.08  E-value: 5.20e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489496907  177 CTNCHGSGARPGTSPKVCPTCNGSGVINRNQ----GAFGFSEPCTDCRGSGSIIEHPCEECK 234
Cdd:pfam00684   1 CPTCNGSGAKPGTKPTTCPTCGGTGQVRRVQqtgpGFFQMQSTCPTCGGTGKIIKDPCKKCK 62
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
8-76 4.95e-22

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 89.39  E-value: 4.95e-22
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907   8 EKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPA-AGERFKAVSEAHNVLSDPAKRKEYDETRR 76
Cdd:COG2214    4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKAlAEELFQRLNEAYEVLSDPERRAEYDRELG 73
DnaJ_zf cd10719
Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of ...
177-234 6.04e-22

Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding.


Pssm-ID: 199908 [Multi-domain]  Cd Length: 65  Bit Score: 88.47  E-value: 6.04e-22
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489496907 177 CTNCHGSGARPGTSPKVCPTCNGSGVINRNQ----GAFGFSEPCTDCRGSGSIIEHPCEECK 234
Cdd:cd10719    1 CPTCNGSGAKPGTKPKTCPTCGGSGQVRQVQgtgfGFFQTQTTCPTCGGTGKIIKDPCPKCK 62
DnaJ smart00271
DnaJ molecular chaperone homology domain;
9-67 1.31e-21

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 87.29  E-value: 1.31e-21
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 489496907     9 KDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNP-AAGERFKAVSEAHNVLSDPAK 67
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKeEAEEKFKEINEAYEVLSDPEK 60
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
8-69 1.17e-11

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 59.81  E-value: 1.17e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489496907   8 EKDFYQELGVSSDASPEEIKRAYRKLARDLHPD--ANPGNPA----AGERFKAVSEAHNVLSDPAKRK 69
Cdd:COG1076    3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDrlAAGLPEEeqrlALQKAAAINEAYETLKDPRGID 70
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
4-72 3.40e-08

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 55.04  E-value: 3.40e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489496907   4 REWVEKDFYQELGVS---SDASPEEIKRAYRKLARDLHPD--ANPGNPAAGERFKAVSEAHNVLSDPAKRKEYD 72
Cdd:COG5269   38 KNWKKVDLYALLGLSkyrTKAIPPQILKAHKKKVYKYHPDktAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYD 111
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
11-73 1.70e-06

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 50.17  E-value: 1.70e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 489496907   11 FYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAgERFKAVSEAHNVLSDPAKRKEYDE 73
Cdd:PTZ00341  575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGF-HKFKKINEAYQILGDIDKKKMYNK 636
djlA PRK09430
co-chaperone DjlA;
9-40 1.82e-06

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 49.04  E-value: 1.82e-06
                         10        20        30
                 ....*....|....*....|....*....|..
gi 489496907   9 KDFYQELGVSSDASPEEIKRAYRKLARDLHPD 40
Cdd:PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPD 231
PLN03165 PLN03165
chaperone protein dnaJ-related; Provisional
176-234 2.55e-03

chaperone protein dnaJ-related; Provisional


Pssm-ID: 178709 [Multi-domain]  Cd Length: 111  Bit Score: 37.49  E-value: 2.55e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489496907 176 PCTNCHGSGArpgtspKVCPTCNGSGVINRNQGAfGFSE--PCTDCRGSGSIIehpCEECK 234
Cdd:PLN03165  43 PCFPCSGTGA------QVCRFCVGSGNVTVELGG-GEKEvsKCINCDGAGSLT---CTTCQ 93
hscB PRK00294
co-chaperone HscB; Provisional
24-71 4.80e-03

co-chaperone HscB; Provisional


Pssm-ID: 166894 [Multi-domain]  Cd Length: 173  Bit Score: 37.52  E-value: 4.80e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 489496907  24 EEIKRAYRKLARDLHPDANPGNP-----AAGERFKAVSEAHNVLSDPAKRKEY 71
Cdd:PRK00294  21 DQLATRYRELAREVHPDRFADAPereqrLALERSASLNEAYQTLKSPPRRARY 73
Anti-TRAP pfam15777
Tryptophan RNA-binding attenuator protein inhibitory protein;
176-208 6.55e-03

Tryptophan RNA-binding attenuator protein inhibitory protein;


Pssm-ID: 406260 [Multi-domain]  Cd Length: 59  Bit Score: 34.88  E-value: 6.55e-03
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 489496907  176 PCTNCHGSGARPGTSPKV---CPTCNGSGVINRNQG 208
Cdd:pfam15777  12 PCPACNGSGDIEPETPYAslpCPKCKGKGVIPTAQG 47
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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