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Conserved domains on  [gi|490521803|ref|WP_004387244|]
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MULTISPECIES: DUF1283 family protein [Cronobacter]

Protein Classification

DUF1283 domain-containing protein( domain architecture ID 10014308)

DUF1283 domain-containing protein similar to Escherichia coli YnfB

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK13659 PRK13659
DUF1283 family protein;
19-109 8.53e-56

DUF1283 family protein;


:

Pssm-ID: 184216  Cd Length: 103  Bit Score: 168.26  E-value: 8.53e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490521803  19 SGVANAQTDKLIIESGDNARTRQDAAMDKEQWNDTRSLRQKVNKRTEKEWDKADVAFDAKDNCEKSANLNAYWEPNTLRC 98
Cdd:PRK13659  13 STSAHAETSKLVIESGDSALSKEQARQSKEQWNDTRSLRQKVNKRVEKEFDKADRAFDNRDKCEQSANINAYWEPNTLRC 92

                         90
                 ....*....|.
gi 490521803  99 LDRRTGRVINP 109
Cdd:PRK13659  93 LDRRTGRPITP 103
 
Name Accession Description Interval E-value
PRK13659 PRK13659
DUF1283 family protein;
19-109 8.53e-56

DUF1283 family protein;


Pssm-ID: 184216  Cd Length: 103  Bit Score: 168.26  E-value: 8.53e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490521803  19 SGVANAQTDKLIIESGDNARTRQDAAMDKEQWNDTRSLRQKVNKRTEKEWDKADVAFDAKDNCEKSANLNAYWEPNTLRC 98
Cdd:PRK13659  13 STSAHAETSKLVIESGDSALSKEQARQSKEQWNDTRSLRQKVNKRVEKEFDKADRAFDNRDKCEQSANINAYWEPNTLRC 92

                         90
                 ....*....|.
gi 490521803  99 LDRRTGRVINP 109
Cdd:PRK13659  93 LDRRTGRPITP 103
DUF1283 pfam06932
Protein of unknown function (DUF1283); This family consists of several hypothetical proteins ...
 34-107 9.04e-39

Protein of unknown function (DUF1283); This family consists of several hypothetical proteins of around 115 residues in length which seem to be specific to Enterobacteria. The function of the family is unknown.


Pssm-ID: 429195  Cd Length: 74  Bit Score: 124.12  E-value: 9.04e-39
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 490521803   34 GDNARTRQDAAMDKEQWNDTRSLRQKVNKRTEKEWDKADVAFDAKDNCEKSANLNAYWEPNTLRCLDRRTGRVI 107
Cdd:pfam06932   1 GDSALSKEAARQSKEQWNDTRSLRQKVNKRAEKEFDKADRAIDARDKCLKSANVNAYWEPNTLRCLDRRTGRPI 74
 
Name Accession Description Interval E-value
PRK13659 PRK13659
DUF1283 family protein;
19-109 8.53e-56

DUF1283 family protein;


Pssm-ID: 184216  Cd Length: 103  Bit Score: 168.26  E-value: 8.53e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490521803  19 SGVANAQTDKLIIESGDNARTRQDAAMDKEQWNDTRSLRQKVNKRTEKEWDKADVAFDAKDNCEKSANLNAYWEPNTLRC 98
Cdd:PRK13659  13 STSAHAETSKLVIESGDSALSKEQARQSKEQWNDTRSLRQKVNKRVEKEFDKADRAFDNRDKCEQSANINAYWEPNTLRC 92

                         90
                 ....*....|.
gi 490521803  99 LDRRTGRVINP 109
Cdd:PRK13659  93 LDRRTGRPITP 103
DUF1283 pfam06932
Protein of unknown function (DUF1283); This family consists of several hypothetical proteins ...
 34-107 9.04e-39

Protein of unknown function (DUF1283); This family consists of several hypothetical proteins of around 115 residues in length which seem to be specific to Enterobacteria. The function of the family is unknown.


Pssm-ID: 429195  Cd Length: 74  Bit Score: 124.12  E-value: 9.04e-39
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 490521803   34 GDNARTRQDAAMDKEQWNDTRSLRQKVNKRTEKEWDKADVAFDAKDNCEKSANLNAYWEPNTLRCLDRRTGRVI 107
Cdd:pfam06932   1 GDSALSKEAARQSKEQWNDTRSLRQKVNKRAEKEFDKADRAIDARDKCLKSANVNAYWEPNTLRCLDRRTGRPI 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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