|
Name |
Accession |
Description |
Interval |
E-value |
| cysW |
PRK11602 |
sulfate/thiosulfate ABC transporter permease CysW; |
1-281 |
0e+00 |
|
sulfate/thiosulfate ABC transporter permease CysW;
Pssm-ID: 183225 Cd Length: 283 Bit Score: 515.84 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 1 MTMMTQAR--EGARINWGKWLLIGIGMLLSAFILVVPMVYIFAKAFSDGLMPVLENIANPDMLHAIWLTVLIALITVPVN 78
Cdd:PRK11602 1 MAEVTQLKryDRPPINWGKWFLIGIGMLVSAFILVVPMIYIFVQAFSKGLMPVLQNLADPDMLHAIWLTVLIALIAVPVN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 79 LVFGTLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDAHDMQIMFAWPGMALVTIFVTCPF 158
Cdd:PRK11602 81 LVFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQLMFSWPGMVLVTIFVTCPF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 159 VVRELVPVMLSQGSHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIE 238
Cdd:PRK11602 161 VVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIE 240
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 490523168 239 LLEQDYNTVGAFTAAALLTLMAILTLFLKSALQWRLNNQEKRV 281
Cdd:PRK11602 241 LLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRLENQEKRA 283
|
|
| CysW |
COG4208 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
11-280 |
3.83e-169 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 443356 Cd Length: 281 Bit Score: 469.21 E-value: 3.83e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 11 ARINWGKWLLIGIGMLLSAFILVVPMVYIFAKAFSDGLMPVLENIANPDMLHAIWLTVLIALITVPVNLVFGTLLAWLVT 90
Cdd:COG4208 12 TEPPWVRWLLIGLALLFLALFLVLPLAAVFAEAFSKGWGAYLAALTDPDALSAIRLTLLVAAIAVPLNLVFGVAAAWAIT 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 91 RFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDAHDMQIMFAWPGMALVTIFVTCPFVVRELVPVMLSQ 170
Cdd:COG4208 92 RFEFRGKRLLITLIDLPFSVSPVVAGLIYVLLFGAQGWFGPWLEAHDIKIIFAVPGIVLATIFVTFPFVARELIPLMQEQ 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 171 GSHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIELLEQDYNTVGAF 250
Cdd:COG4208 172 GTDEEEAALTLGASGWQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGETNTLPLHVEILYNEYNFVAAF 251
|
250 260 270
....*....|....*....|....*....|
gi 490523168 251 TAAALLTLMAILTLFLKSALQWRLNNQEKR 280
Cdd:COG4208 252 AVASLLALLALVTLVLKTLLEWRTARRLAA 281
|
|
| 3a0106s02 |
TIGR00969 |
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ... |
1-273 |
6.37e-124 |
|
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]
Pssm-ID: 273370 Cd Length: 271 Bit Score: 354.74 E-value: 6.37e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 1 MTMMTQAREgARINWGKWLLiGIGMLLSAFILVVPMVYIFAKAFSDGLMPVLENIANPDMLHAIWLTVLIALITVPVNLV 80
Cdd:TIGR00969 1 MTALPSARF-RFIKWGKLSL-GIALLYVFLILILPVAALFVQAFSKGLGQFWQNATDPIAVSAYNLTLLMALIAVPLNGV 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 81 FGTLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDAHDMQIMFAWPGMALVTIFVTCPFVV 160
Cdd:TIGR00969 79 FGLLIAWVLTRYQFPGRKLLDALIDLPFALSPVVAGLTLALLYGSNGWLGSWLASFGIQIIFTWPGMALAMIFVSLPFVV 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 161 RELVPVMLSQGSHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIELL 240
Cdd:TIGR00969 159 REVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAVVVVSGNIPGKTLTLPLLIEER 238
|
250 260 270
....*....|....*....|....*....|...
gi 490523168 241 EQDYNTVGAFTAAALLTLMAILTLFLKSALQWR 273
Cdd:TIGR00969 239 LEQYDYPGAYVIAAVLLLVSLVTLFLINALQAR 271
|
|
| permease_CysW |
TIGR02140 |
sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two ... |
17-273 |
7.25e-120 |
|
sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysT (TIGR02139). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]
Pssm-ID: 162725 Cd Length: 261 Bit Score: 343.99 E-value: 7.25e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 17 KWLLIGIGMLLSAFILVVPMVYIFAKAFSDGLMPVLENIANPDMLHAIWLTVLIALITVPVNLVFGTLLAWLVTRFNFPG 96
Cdd:TIGR02140 2 RYLLISLALGLLFLLLLLPLALIFQEAFEKGFGVFFAAISDPDALSAIKLTLLVALIVVPLNTVFGVCAAWVLTRFQFPG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 97 RQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDAHDMQIMFAWPGMALVTIFVTCPFVVRELVPVMLSQGSHEDE 176
Cdd:TIGR02140 82 KRLLLTIIDLPFSVSPVVAGLIFVLLYGSQGWLGPWLEDLDIKIIFSLPGIVLATMFVTCPFVARELIPVMEEQGTEQEE 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 177 AAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIELLEQDYNTVGAFTAAALL 256
Cdd:TIGR02140 162 AALTLGASWWQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGKTNTLPLHVELLYNEYQSYAAFAAASLL 241
|
250
....*....|....*..
gi 490523168 257 TLMAILTLFLKSALQWR 273
Cdd:TIGR02140 242 ALLALVTLVLKAILERR 258
|
|
| CysU |
COG0555 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
12-275 |
1.14e-69 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440321 [Multi-domain] Cd Length: 268 Bit Score: 216.54 E-value: 1.14e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 12 RINWGKWLLIGIGMLLSAFILVvPMVYIFAKAFSDGLMPVLENIANPDMLHAIWLTVLIALITVPVNLVFGTLLAWLVTR 91
Cdd:COG0555 5 VLPGFGLTLGLTLLYLSLIVLL-PLAALVLKAAGLGWAEFWAVLTSPRVLAALKLSLGTALIAALINLVFGLPLAWVLVR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 92 FNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDAHDMQIMFAWPGMALVTIFVTCPFVVRELVPVMLSQG 171
Cdd:COG0555 84 YRFPGKRLVDALVDLPFALPTAVAGIALLLLFGPNGWLGQLLAPLGIKVAFTPLGIVLAQTFVSLPFVVRTVQPVLEELD 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 172 SHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIELLEQDYNTVGAFT 251
Cdd:COG0555 164 PELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIAGNLPMKTEILPLLIYLKLEEGDYAGATA 243
|
250 260
....*....|....*....|....
gi 490523168 252 AAALLTLMAILTLFLKSALQWRLN 275
Cdd:COG0555 244 IALVLLLISFLLLLLINLLQRRSR 267
|
|
| cysT |
CHL00187 |
sulfate transport protein; Provisional |
12-243 |
2.45e-56 |
|
sulfate transport protein; Provisional
Pssm-ID: 214388 [Multi-domain] Cd Length: 237 Bit Score: 181.37 E-value: 2.45e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 12 RINWGKWLLIGIGMLLSAFILVVPMVYIFAKAFSDGLMPVLENIANPDMLHAIWLTVLIALITVPVNLVFGTLLAWLVTR 91
Cdd:CHL00187 5 NFSLKFSSIYIISLSYIIFLLVLPILALLIKASQQPWSDFLQKATEPIALSAYSLTLSMALIAALINGFFGLLIAWVLVR 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 92 FNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDAHDMQIMFAWPGMALVTIFVTCPFVVRELVPVMLSQG 171
Cdd:CHL00187 85 YNFPGKRLLDAAVDLPFALPTSVAGLTLATVYGDNGWIGHLLSHLGIQIVFTKLGVLLAMIFVSFPFVVRTIQPVLQEIE 164
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490523168 172 SHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIE-LLEQD 243
Cdd:CHL00187 165 KELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGEYGSIVIISSNIPFKDLVASVLIFqSLEQY 237
|
|
| ModB |
COG4149 |
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ... |
58-273 |
2.97e-50 |
|
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis
Pssm-ID: 443320 [Multi-domain] Cd Length: 223 Bit Score: 165.22 E-value: 2.97e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 58 PDMLHAIWLTVLIALITVPVNLVFGTLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDAH- 136
Cdd:COG4149 3 PEDWSALWLSLKVALIATLLLLLLGIPLAWWLARTRFRGKGLLEALVTLPLVLPPTVLGFYLLLLFGRNGPLGQLLEELf 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 137 DMQIMFAWPGMALVTIFVTCPFVVRELVPVMLSQGSHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEF 216
Cdd:COG4149 83 GISLVFTWTGAVLASVVVSLPLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGEF 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 490523168 217 GAVSVVSGSIRGETLSLPLQIELLEQDYNTVGAFTAAALLTLMAILTLFLKSALQWR 273
Cdd:COG4149 163 GATLMFAGNIPGKTQTLPLAIYDAVEAGDYAAAHALSLILLAISFVVLLLLNLLNRR 219
|
|
| permease_CysT |
TIGR02139 |
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two ... |
19-274 |
1.87e-48 |
|
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]
Pssm-ID: 131194 Cd Length: 265 Bit Score: 162.11 E-value: 1.87e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 19 LLIGIGMLLSAFILVVPMVYIFAKAFSDGLMPVLENIANPDMLHAIWLTVLIALITVPVNLVFGTLLAWLVTRFNFPGRQ 98
Cdd:TIGR02139 7 LSLGVTLTYLSLIVLLPLAALFLKASQLGWAGFWQIITEPRVLAAYKLSFGTALIAALINAVFGTLLAWVLVRYRFPGKR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 99 LLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDAHDMQIMFAWPGMALVTIFVTCPFVVRELVPVMLSQGSHEDEAA 178
Cdd:TIGR02139 87 IVDALVDLPFALPTAVAGIALATLYSPNGWIGSFLAPLGIKIAFTPLGIVIALVFVSLPFVVRTVQPVLEEIEKELEEAA 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 179 ILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIELLEQDYNTVGAFTAAALLTL 258
Cdd:TIGR02139 167 ASLGASRWQTFWRVILPALLPALLTGFALAFARAVGEYGSVIFIAGNLPMKTEIAPLLIFQKLEQYDYAGATAIASVMLI 246
|
250
....*....|....*.
gi 490523168 259 MAILTLFLKSALQWRL 274
Cdd:TIGR02139 247 ISFVILLFINLLQWWA 262
|
|
| PRK10971 |
PRK10971 |
sulfate/thiosulfate ABC transporter permease CysT; |
19-275 |
9.50e-48 |
|
sulfate/thiosulfate ABC transporter permease CysT;
Pssm-ID: 182873 Cd Length: 277 Bit Score: 160.69 E-value: 9.50e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 19 LLIGIGMLLSAFILVVPMVYIFAKAFSDGLMPVLENIANPDMLHAIWLTVLIALITVPVNLVFGTLLAWLVTRFNFPGRQ 98
Cdd:PRK10971 15 LSLGTSLLFVCLILLLPLSALVMQLSQMSWAQYWEVITNPQVVAAYKVTLLSAFVASIFNAVFGLLMAWILTRYRFPGRT 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 99 LLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDAHDMQIMFAWPGMALVTIFVTCPFVVRELVPVMLSQGSHEDEAA 178
Cdd:PRK10971 95 LLDALMDLPFALPTAVAGLTLASLFSVNGWYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 179 ILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSI--RGETLSLPLQIELLEQDYNTVGAFTAAALL 256
Cdd:PRK10971 175 ETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGNIawKTEVTSLMIFVRLQEFDYPAASAIASVILA 254
|
250
....*....|....*....
gi 490523168 257 TlmAILTLFLKSALQWRLN 275
Cdd:PRK10971 255 A--SLLLLFSINTLQSRFG 271
|
|
| modB_ABC |
TIGR02141 |
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ... |
65-266 |
2.78e-41 |
|
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]
Pssm-ID: 273993 [Multi-domain] Cd Length: 208 Bit Score: 141.61 E-value: 2.78e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 65 WLTVLIALITVPVNLVFGTLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDAHDMQIMFAW 144
Cdd:TIGR02141 1 WLSLKVAVIATLLLLPLGIPVAWLLARSRFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFGPNGPIGKLLELFGISLVFTF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 145 PGMALVTIFVTCPFVVRELVPVMLSQGSHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSG 224
Cdd:TIGR02141 81 TGAVLASVIVSFPLMVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFAG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 490523168 225 SIRGETLSLPLQI-ELLEQDYNTvgAFTAAALLTLMAILTLFL 266
Cdd:TIGR02141 161 NIPGETQTIPLAIyDAVESDYEL--AHQLSLVLLAISLIVLLL 201
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
18-266 |
2.97e-41 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 149.16 E-value: 2.97e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 18 WLLIGIGMLLSAFILVVPMVYIFAKAFSDGLMPVLENIANPDMLHAIWLTVLIALITVPVNLVFGTLLAWLVTRFNFPGR 97
Cdd:COG1178 10 RLLLLLLALLLALLVLLPLLALLLRAFTDGLANFWALLSDPYLWRALGNTLLLALLVTLLSLLLGVPLAWLLARTDFPGR 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 98 QLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDAH---DMQIMFAWPGMALVTIFVTCPFVVRELVPVMLSQGSHE 174
Cdd:COG1178 90 RLLRWLLLLPLALPPYVVALAWIALFGPNGLLNTLLRALfglEPPDIYGLGGIILVLVLFNYPYVYLLLRAALRSIDASL 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 175 DEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRgetlSLPLQI-ELLEQDYNTVGAFTAA 253
Cdd:COG1178 170 EEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLVLGGGYT----TLTTAIyQAWLGDFDLGAAAALA 245
|
250
....*....|...
gi 490523168 254 ALLTLMAILTLFL 266
Cdd:COG1178 246 LVLLLLVLLLLLL 258
|
|
| Mo_ABC_porter |
TIGR01581 |
NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively ... |
55-266 |
5.25e-41 |
|
NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively weak homology compared to its neighbor clades, the molybdate (TIGR02141) and sulfate (TIGR00969) porters. Neighbor-Joining, PAM-distance phylogenetic trees support the separation of the clades in this way. Included in this group is a gene designated NifC in Clostridium pasturianum. It would be reasonable to presume that NifC acts as a molybdate porter since the most common form of nitrogenase is a molybdoenzyme. Several other sequences falling within the scope of this model are annotated as molybdate porters and one, from Halobacterium, is annotated as a sulfate porter. There is presently no experimental evidence to support annotations with this degree of specificity.
Pssm-ID: 130643 Cd Length: 225 Bit Score: 141.38 E-value: 5.25e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 55 IANPDMLHAIWLTVLIALITVPVNLVFGTLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLD 134
Cdd:TIGR01581 14 LTDPENIKALRLSLATSLASLLLAVIIGIPTAYVLARVRFPLKKLLDTLLDLPMVLPPLVAGLALLLLFGRNGLLGPYLE 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 135 AHDMQIMFAWPGMALVTIFVTCPFVVRELVPVMLSQGSHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIG 214
Cdd:TIGR01581 94 AAGIQVIFSTLGVVLAQTFVASPYYVRVARSTFKSVDPRYEDVARSLGAGPLETFRKITLPMARPGLLAGLVLAWARALG 173
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 490523168 215 EFGAVSVVSGSIRGETLSLPLQIELLEQDYNTVGAFTAAALLTLMAILTLFL 266
Cdd:TIGR01581 174 EFGATLMFAGSIQGKTRTLPLAIYLNIQSDNIEAAVASALLLLVIAFLLLLV 225
|
|
| modB |
PRK09421 |
molybdate ABC transporter permease subunit; |
58-262 |
8.55e-34 |
|
molybdate ABC transporter permease subunit;
Pssm-ID: 181841 Cd Length: 229 Bit Score: 122.72 E-value: 8.55e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 58 PDMLHAIWLTVLIALITVPVNLVFGTLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDAH- 136
Cdd:PRK09421 5 DPEWQAVLLSLKVSSVAVLFSLPFGILVAWLLARCRFPGKSLLDSLLHLPLVLPPVVTGYLLLISMGRRGFIGQWLYEWf 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 137 DMQIMFAWPGMALVTIFVTCPFVVR------ELVPVMLSQgshedeAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNA 210
Cdd:PRK09421 85 GISFAFSWRGAALAAAVMAFPLMVRairlslEAVDRKLEQ------AARTLGASPWRVFFTITLPLTLPGIIAGTVLAFA 158
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 490523168 211 RAIGEFGAVSVVSGSIRGETLSLPLQIELLEQdynTVGAFTAAALLTLMAIL 262
Cdd:PRK09421 159 RSLGEFGATITFVSNIPGETQTIPSAMYTLIQ---TPGGESAAARLCIISIA 207
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
12-266 |
4.95e-31 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 121.04 E-value: 4.95e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 12 RINWGKWLLIGIGMLLSAFILVVPMVYIFAKAFSDGLMPVL------ENIANPDMLHAIWLTVLIALITVPVNLVFGTLL 85
Cdd:COG1178 282 KLGRWRWLALALCLLLVLLGLLLPLLALLLWSLTKALDDNLtldnyrFVLLDPSLLRALLNSLLLALLAALLAVLLALLL 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 86 AWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGgwldahdmqIMFAWPGMALVTIFVTCPFVVRELVP 165
Cdd:COG1178 362 AYLVRRRRGRLARLLDRLAMLPYAVPGIVLGLGLLLLFNRPLPLL---------LYGTLAILVLAYVVRFLPFALRSLEA 432
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 166 VMLSQGSHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSirgETLSLPLQIELLEQDYN 245
Cdd:COG1178 433 ALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELSATLLLRPP---GFETLAVLIYQLASSGR 509
|
250 260
....*....|....*....|.
gi 490523168 246 TVGAFTAAALLTLMAILTLFL 266
Cdd:COG1178 510 YGEAAALALLLVLVSLLPVLL 530
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
12-280 |
3.49e-29 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 111.74 E-value: 3.49e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 12 RINWGKWLLIGIGMLLSAFiLVVPMVYIFAKAFSDGLMPVL-----------ENIANPDMLHAIWLTVLIALITVPVNLV 80
Cdd:COG1177 1 SSRLGRLLLRLFLALVLLF-LYLPILVLVLYSFNDSWFLTFppegftlrwyaELFSDPRLLDALLNSLLIALLSTLLATV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 81 FGTLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLdahdmqimfawpGMALVTIFVTCPFVV 160
Cdd:COG1177 80 LGTPAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLSGGLW------------GLILAHVVFTLPFVV 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 161 RELVPVMLSQGSHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSirgetLSLPLQIELL 240
Cdd:COG1177 148 LVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAGP-----GVTTLPVYIY 222
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 490523168 241 EQdYNTVGAFTAAALLTLMAILTLFLKSALQWRLNNQEKR 280
Cdd:COG1177 223 SM-IRRGISPEINALSTLLILLSLLLLLLAERLRRRGERR 261
|
|
| UgpA |
COG1175 |
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; |
5-279 |
1.75e-27 |
|
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440788 [Multi-domain] Cd Length: 298 Bit Score: 107.91 E-value: 1.75e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 5 TQAREGARINWGKWLLIGIGMLLSAFILVVPMVYIFAKAFSD--GLMPV-----LEN----IANPDMLHAIWLTVLIALI 73
Cdd:COG1175 8 AARRRRRRRRLAAYLFLLPALLLLLVFVLYPLLYTLYLSFTDwnLLGPPpefvgLDNyarlFTDPRFWNALGNTLLFTVV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 74 TVPVNLVFGTLLAWLVTRfNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSN-GPLGGWLDA-HDMQIMF------AWP 145
Cdd:COG1175 88 SVPLQLVLGLLLALLLNR-KLRGRGFFRTLFFLPWVISPVVVALIWKWLFNPDyGLLNALLGAlGLEPINWlgdpslALP 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 146 GMALVTIFVTCPFVV-----------RELVpvmlsqgshedEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIG 214
Cdd:COG1175 167 AVIIVTVWKGTGFNMliflaglqsipRELY-----------EAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGALQ 235
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 490523168 215 EFGAVSVV-SGSIRGETLSLPLQIelleqdYNTvgAFT------AAALLTLMAILTLFLkSALQWRLNNQEK 279
Cdd:COG1175 236 VFDLVYVLtGGGPGNSTTTLVLYI------YQT--AFQqfdfgyASAIAVVLFLIILVL-TLLQLRLLRRRE 298
|
|
| PotB |
COG1176 |
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
8-280 |
6.83e-24 |
|
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];
Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 97.91 E-value: 6.83e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 8 REGARINWGKWLLIGIGMLLSAFILVVPMVYIFAKAFSDGLMPV-------LEN----IANPDMLHAIWLTVLIALITVP 76
Cdd:COG1176 2 SAALRRRLRPLLLLLPALLWLLLFFVLPLLLLLVYSFTTRDPYGgvvpgftLENyarlFTDPLYLKVLLRTLWIALLTTL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 77 VNLVFGTLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDA-----HDMQIMFAWPGMALVT 151
Cdd:COG1176 82 ICLLLGYPIAYFLARAPPRWRNLLLLLVILPFWTSFLVRTYAWIVLLGRNGLLNSLLLAlglidEPLRLLYTEFAVVIGL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 152 IFVTCPFVVRELVPVMLSQGSHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGsirGETL 231
Cdd:COG1176 162 VYVYLPFMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPALLGG---GKVL 238
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 490523168 232 SLPLQIellEQDYNTVGAF-TAAALLTLMAILTLFLKSALQWRLNNQEKR 280
Cdd:COG1176 239 MIGNLI---YQQFLSALNWpLAAALAVVLLLIVLLVLLLYLRLLRRRRLL 285
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
64-261 |
2.51e-22 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 91.57 E-value: 2.51e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 64 IWLTVLIALITVPVNLVFGTLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDahdmqimFA 143
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPG-------LG 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 144 WPGMALVTIFVTcPFVVRELVPVMLSQGSHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVS 223
Cdd:cd06261 74 LPALILALLLIA-PFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLG 152
|
170 180 190
....*....|....*....|....*....|....*...
gi 490523168 224 GSIRGETLSLPLQIELLEQDYNTVGAFTAAALLTLMAI 261
Cdd:cd06261 153 GGEAPGPGTGLLLIFAILFPGDLGVAAAVALILLLLSL 190
|
|
| PhnU2 |
TIGR03262 |
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ... |
15-277 |
1.51e-17 |
|
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 274495 [Multi-domain] Cd Length: 546 Bit Score: 82.42 E-value: 1.51e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 15 WGKWLLIGIGMLLSAFILVVPMVYIFAKAFSD------GLMPVLENIANPDMLHAIWLTVLIALITVPVNLVFGTLLAWL 88
Cdd:TIGR03262 1 LIARLLLAGMILALLLFLLLPLLALLTKSVYDsdgdfiGLANFAEYFATPGLLQSLGNSLTVSAIVTAIVVPLAFAFAYA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 89 VTRFNFPGRQLLLTLLDIP-FAVS--PVVAgLVYLlfYGSNGPLGGWLDAHDmqiMFAWPGMALVTIFVTCPFVVRELVP 165
Cdd:TIGR03262 81 LTRSRIPGKGAFRLVALLPlLAPSllPAIS-LIYL--FGNQGLLKGLLGGFS---IYGFWGIVIGEVFYTFPHALMILVT 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 166 VMLSQGSHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIrgETLSLPLQIELLEQDYN 245
Cdd:TIGR03262 155 ALSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVIGGDY--NVLATDIYKQVIGQQNF 232
|
250 260 270
....*....|....*....|....*....|..
gi 490523168 246 TVGAFTAAALLtLMAILTLFLKSALQWRLNNQ 277
Cdd:TIGR03262 233 PMGAVVGVLLL-LPALLAFGIDRAIQRRQRAQ 263
|
|
| TupA |
COG4662 |
ABC-type tungstate transport system, periplasmic component [Inorganic ion transport and ... |
36-230 |
1.02e-16 |
|
ABC-type tungstate transport system, periplasmic component [Inorganic ion transport and metabolism];
Pssm-ID: 443699 [Multi-domain] Cd Length: 232 Bit Score: 77.07 E-value: 1.02e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 36 MVYIFAkAFSDGLMPVLEniANPDMLHAIWLTVLIALITVPVNLVFGTLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVA 115
Cdd:COG4662 1 MDYILE-GFAEALRLLLS--GDPELWEIVLLSLRVSLTATLIAALIGLPLGALLALKRFPGRRLVISLLNTLMGLPPVVV 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 116 GLVYLLFYGSNGPLGGWldahdmQIMFAWPGMALVTIFVTCPFVVRELVPVMLSQGSHEDEAAILLGASGWQMFRRVtLP 195
Cdd:COG4662 78 GLLVYLLLSRSGPLGFL------GLLFTPTAMIIAQTVLALPIVAALTRAAVEDLDRRLRETLRSLGASRLQALLTL-LW 150
|
170 180 190
....*....|....*....|....*....|....*
gi 490523168 196 NIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGET 230
Cdd:COG4662 151 EARFGLLAAVLAGFGRAISEVGAVMMVGGNIKGYT 185
|
|
| PRK15050 |
PRK15050 |
2-aminoethylphosphonate transport system permease PhnU; Provisional |
11-266 |
1.62e-16 |
|
2-aminoethylphosphonate transport system permease PhnU; Provisional
Pssm-ID: 237888 [Multi-domain] Cd Length: 296 Bit Score: 77.74 E-value: 1.62e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 11 ARINWGKWLLIGIGMLLSAFILVVPMVYIFAKAFSDGLMPVLEN----IANPDMLHAIWLTVLIALITVPVNLVFGTLLA 86
Cdd:PRK15050 18 RRRRLRPLLWLLLPLLVLAPLVVYPLVRVVLQSLTGEHGLGLATyravLGSPDFRGALLTTLQIAFASTAGCLVLGVLLA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 87 WLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWL------DAHDMQIMFAWPGMALVTIFVTCPFVV 160
Cdd:PRK15050 98 LVLAFVPFPGASLVGRFIDTFVAFPSFLITLAFTFLYGSAGSVNIALqrlfglEAPPLDFLYSPGGVILAEITFYTPFVV 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 161 RELVPVMLSQGSHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVsGSIRGETlsLPLQIE-- 238
Cdd:PRK15050 178 RPLLAAFAQLDARQLEAAASLGASPWRVARRVILPEAWPALAAGGSLCLLLTLNEFGIVLFT-GAKDVVT--LPVLIYsk 254
|
250 260
....*....|....*....|....*....
gi 490523168 239 -LLEQDYNtvgafTAAALLTLMAILTLFL 266
Cdd:PRK15050 255 aIVDFDYP-----TACAIAVVNLALSLGL 278
|
|
| UgpE |
COG0395 |
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ... |
4-198 |
3.81e-14 |
|
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440164 [Multi-domain] Cd Length: 282 Bit Score: 70.89 E-value: 3.81e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 4 MTQAREGARINWGKWLLIGIGMLLSAFILVvPMVYIFAKAFSDG---------LMPV---LENIA----NPDMLHAIWLT 67
Cdd:COG0395 1 MSATARRRRRRLGRILLYLLLILLALLFLF-PLYWMVVTSFKPPaeifsgppsLLPSeftLENYRaaftDGPFGRYLLNS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 68 VLIALITVPVNLVFGTLLAWLVTRFNFPGRQLLLTLLDIPFAVsPVVAGLV--YLLFYGsngplGGWLDahdmqimfAWP 145
Cdd:COG0395 80 LIVAVVSTVLSLLLSSLAAYALARFRFRGRKLLFLLILATLMI-PGQVLLIplYLLFRQ-----LGLLN--------TYW 145
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 490523168 146 GMALVTIFVTCPFVV-----------RELvpvmlsqgsheDEAAILLGASGWQMFRRVTLPNIR 198
Cdd:COG0395 146 GLILPYLAFGLPFGIfllrqffrsipREL-----------EEAARIDGASEFRIFWRIVLPLSK 198
|
|
| PhnU |
TIGR03226 |
2-aminoethylphosphonate ABC transporter, permease protein; This ABC transporter permease ... |
55-269 |
1.94e-13 |
|
2-aminoethylphosphonate ABC transporter, permease protein; This ABC transporter permease (membrane-spanning) component is found in a region of the salmonella typhimurium LT2 genome responsible for the catabolism of 2-aminoethylphosphonate via the phnWX pathway (GenProp0238).
Pssm-ID: 274484 Cd Length: 288 Bit Score: 68.82 E-value: 1.94e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 55 IANPDMLHAIWLTVLIALITVPVNLVFGTLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWL- 133
Cdd:TIGR03226 61 FASHDFIDALGNTLQIAFAAAGGALVLGSLLAAILFFIPFPGAQLVGRFIDLFIAFPSFLIAFAFIFIYGSAGLLNGALm 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 134 -----DAHDMQIMFAWPGMALVTIFVTCPFVVRELVPVMLSQGSHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLT 208
Cdd:TIGR03226 141 aafafDAPPLDFLFGAGGVILAEITFFTPFVMRPLLAGFAQIDKRLLEAASILGAHGLMLARQVIFPAALPAIAAGGILC 220
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 490523168 209 NARAIGEFGAVSVVsGSIRGETLSLPLQIE-LLEQDYNTVGAFTAAALLTLMAILTLFLKSA 269
Cdd:TIGR03226 221 FLLTLNEFGILLFI-GAAGLITLPMAIYSKaILDIDLPAAAAGALIMIALSLALFALYRLAA 281
|
|
| COG4132 |
COG4132 |
ABC-type uncharacterized transport system, permease component [General function prediction ... |
4-272 |
2.94e-13 |
|
ABC-type uncharacterized transport system, permease component [General function prediction only];
Pssm-ID: 443307 [Multi-domain] Cd Length: 286 Bit Score: 68.29 E-value: 2.94e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 4 MTQAREGARINWGKWLLIGIGMLLSAFILVVPMVYIFAKAFSDGLMPV-LENIA---NPDMLHAIWLTVLIALITVPVNL 79
Cdd:COG4132 1 MTTASRRRRRKWLAWLGLLPFFLFVLLFLLLPTVWVVIGAFQDDDGGFtLANYAeltSPFYLQAFWNSIWLSLASALIGA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 80 VFGTLLAWLVTRFNFPG-RQLLLTLLDIP--FAVSPVVAGLVYLLfyGSNGPLGGWLDAHDMQIM-----FAWPGMALVT 151
Cdd:COG4132 81 VIGLLLAYALRRGGPGWlRRAVLAFSGVAsnFAGVPLAFAFIATL--GRNGLVTLLLKQLGIDLYdgfnlYSFWGLILVY 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 152 IFVTCPFVVRELVPVMLSQGSHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEF--------GAVSVV- 222
Cdd:COG4132 159 LYFQIPLMVLLLYPALDGLRREWREAAALLGASRWQYWRRVALPVLAPSLLGTFLLLFANAFGAYatayaltgGNYNLVp 238
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 490523168 223 ---SGSIRGETLslpLQIELleqdyntvgaftAAALLTLMAILTLFLKSALQW 272
Cdd:COG4132 239 iriGALISGDVL---LDPNL------------GAALALGMIVIMALVMALYQW 276
|
|
| MalG |
COG3833 |
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ... |
4-266 |
3.36e-13 |
|
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];
Pssm-ID: 443045 [Multi-domain] Cd Length: 282 Bit Score: 68.25 E-value: 3.36e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 4 MTQAREGARINWGKWLLIGIGMLLSAFILVVPMVYIFAKAFSDG-------LMP---VLEN----IANPDMLHAIWLTVL 69
Cdd:COG3833 1 MSRRKSRKRRRRLKLGLRHLVLIILAIIALFPILWVVSASFNPGgslysssLIPenfTLENykklFTETPFLRWFLNSLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 70 IALITVPVNLVFGTLLAWLVTRFNFPGRQLLLTLLDIpFAVSPVVAGLV--YLLFYGSNGplggwLDAHDMQIMFAWPGM 147
Cdd:COG3833 81 VAVVTAIISVFLAALAAYAFSRFRFKGRKAGLLALLL-LQMFPAFLALValYLLLSALGL-----LNTLLGLILVYLGGA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 148 ALVTIFV------TCPfvvRELvpvmlsqgsheDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSV 221
Cdd:COG3833 155 IPFNTWLmkgyfdTIP---KEL-----------DEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILASV 220
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 490523168 222 VSGSIRGETLSLPLQiELLEQDYNT-VGAFTAAALLTLMAILTLFL 266
Cdd:COG3833 221 LLRSPENYTLAVGLY-SFVSDQRNTnWGVFAAGAVLVAIPIVILFL 265
|
|
| ABC_perm1 |
NF038017 |
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ... |
67-230 |
5.82e-13 |
|
ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.
Pssm-ID: 411610 [Multi-domain] Cd Length: 184 Bit Score: 65.64 E-value: 5.82e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 67 TVLIALITVPVnlvfGTLLAWlvtrFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWldahdmQIMFAWPG 146
Cdd:NF038017 9 TLIAALIGIPL----GALLAL----RRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSRSGPLGFL------GLLYTPTA 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 147 MALVTIFVTCPFV-------VRELVPVMLSQgshedeaAILLGASGWQMFRRVtLPNIRWALLYGVVLTNARAIGEFGAV 219
Cdd:NF038017 75 MIIAQAVLALPIVagltlaaVQGLDPELRLQ-------ILSLGATRWQALWTL-LKEARFALLAAVLAGFGRAISEVGAV 146
|
170
....*....|.
gi 490523168 220 SVVSGSIRGET 230
Cdd:NF038017 147 MMVGGNIRGYT 157
|
|
| malG |
PRK10998 |
maltose ABC transporter permease MalG; |
64-266 |
2.49e-08 |
|
maltose ABC transporter permease MalG;
Pssm-ID: 182891 Cd Length: 296 Bit Score: 53.94 E-value: 2.49e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 64 IWLTVLIALITVPVNLVFGTLLAWLVTRFNFPGRQLLLTLLDIpFAVSPVVAGLV--YLLF--YGSNGPLGGwLDAHDMQ 139
Cdd:PRK10998 85 LWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLI-FQMFPAVLSLValYALFdrLGQYIPFIG-LNTHGGV 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 140 IMFAWPGMALVTIFVTCPFvvrELVPVMLsqgsheDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAV 219
Cdd:PRK10998 163 IFAYLGGIALHVWTIKGYF---ETIDSSL------EEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVA 233
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 490523168 220 SVVSGSIRGETLSLPLQIELLEQDYnTVGAFTAAALLTLMAILTLFL 266
Cdd:PRK10998 234 SLLLRDVNSYTLAVGMQQYLNPQNY-LWGDFAAAAVLSAIPITVVFL 279
|
|
| thiP |
PRK09433 |
thiamine transporter membrane protein; Reviewed |
24-203 |
1.23e-07 |
|
thiamine transporter membrane protein; Reviewed
Pssm-ID: 181853 [Multi-domain] Cd Length: 525 Bit Score: 52.53 E-value: 1.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 24 GMLLSAFILVVPMVYIFAKAFSDGLMPVLENIANPDMLHAIWLTVLIALITVPVNLVFGTLLAWLVTRFNFPGRQLLLTL 103
Cdd:PRK09433 6 GVLAAALLVALALLALLALWLHAPGGDWDAVWQDSYLWHVLRFSFWQAFLSALLSVLPAIPLARALYRRRFPGRGLLLRL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 104 LDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDAHDMQIMFA---WPGMALVTIFVTCPFVVRELVPVMLSQGSHEDEAAIL 180
Cdd:PRK09433 86 CAMTLVLPVLVAVFGLLSVYGRSGWLAQLLQALGLEWPFSiygLQGILLAHVFFNLPLATRLLLQALESIPAEQRQLAAQ 165
|
170 180
....*....|....*....|...
gi 490523168 181 LGASGWQMFRRVTLPNIRWALLY 203
Cdd:PRK09433 166 LGMRGWQFFRLVEWPYLRRQLPP 188
|
|
| thiP |
PRK09433 |
thiamine transporter membrane protein; Reviewed |
16-266 |
2.12e-07 |
|
thiamine transporter membrane protein; Reviewed
Pssm-ID: 181853 [Multi-domain] Cd Length: 525 Bit Score: 51.76 E-value: 2.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 16 GKWLLIGIGMLLSAFILVV--PMVYIFAKAFSDGLMPVLeniANPDMLHAIWLTVLIALITVPVNLVFGTLLAWLVTRFN 93
Cdd:PRK09433 274 SLWSRLWDGLLIVLALLLLlpPLLAVVVSGLNASLLRVL---AQPALWQALWTSLRIALAAALLAVVLTMMLLWSSRELR 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 94 FPGRQLLLTLLD----IPFAVSPVV--AGLVYLLFYGSNGPLggwldahdmqimFAWPGMALVTIFVTCPFVVRELVPVM 167
Cdd:PRK09433 351 LRQRKLAAQALElsgmLILAMPGIVlaTGLFLLLRNTTDLPA------------SALGIVILTNALMALPYALRVLEPPM 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 168 LSQGSHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVsGSIRGETlsLPLQIELLEQDYNTV 247
Cdd:PRK09433 419 RDIAARYGRLCQSLGIRGWSRLRLIELRALRRPLAQAFAFACALSLGDFGVIALF-GSQDFRT--LPFLLYQQLGSYRSQ 495
|
250
....*....|....*....
gi 490523168 248 GAFTAAALLTLMAILTLFL 266
Cdd:PRK09433 496 DAAVTALLLLLLCLLLFTL 514
|
|
| phosphate_pstC |
TIGR02138 |
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ... |
61-273 |
1.27e-06 |
|
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273992 [Multi-domain] Cd Length: 295 Bit Score: 48.80 E-value: 1.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 61 LHAIWLTVLIALITVPVNLVFGTLLAWLVTRFNFP-GRQLLLTLLDIPFAVSPVVAGLVYLLFYG------SNGPLGGWL 133
Cdd:TIGR02138 62 LPLIVGTLITSLIALLIAVPVGIGIAIFLSEIAPKrVRSVLKPVVELLAGIPSVVYGFWGLFVLVpflkphFQPFLGSNL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 134 DAHDMQIMFAWPGMALVTIFVTcPFV------VRELVPVMLSqgshedEAAILLGASGWQMFRRVTLPNIRWALLYGVVL 207
Cdd:TIGR02138 142 GLIPLFGGPILTAGIVLAIMIL-PTIasisrdALRAVPRSYK------EASYALGATKWETIRRVILPAARSGIVGAVVL 214
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490523168 208 TNARAIGEFGAVSVVSGSIR----------GETLSLPLQIELLEQDYNTVGA---FTAAALLTLMAILTLFLKSALQWR 273
Cdd:TIGR02138 215 GLGRALGETMAVTMVIGNVFpisplslfdpGTTITSLIANQFGEASGGSVHTsalFALGLVLFVITLLVNILARYIVRR 293
|
|
| PstA |
COG0581 |
ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
31-266 |
2.26e-06 |
|
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440346 [Multi-domain] Cd Length: 259 Bit Score: 47.72 E-value: 2.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 31 ILVVPMVYIFAKAFSDGL----MPVLENIANPDM-----LHAIWLTVLIALITVPVNLVFGTLLAWLVTRFNFPGR--QL 99
Cdd:COG0581 1 LALLPLVWILGTVLVKGLpalsWEFLTSSPSPGPegggiLPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARGGRlaRL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 100 LLTLLDIPFAVSPVVAGL-VYLLF-YGSNGPLGGWldahdmqimfaWPGMALVtiFVTCPFVVR------ELVPVMLSqg 171
Cdd:COG0581 81 IRFAIDVLAGVPSIVYGLfGYALFvLTLGLGFSLL-----------AGALALA--LLMLPVVIRtteealRLVPNSLR-- 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 172 shedEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGE-------FGAVSVVSGSIRGETLSLPLQIelleqdY 244
Cdd:COG0581 146 ----EASYALGATKWQTIRKVVLPAALPGILTGVILAIARAAGEtapllftAGVSPFLPLSLFDPFATLPVHI------Y 215
|
250 260 270
....*....|....*....|....*....|.
gi 490523168 245 NTVG---------AFTAAALLTLMaILTLFL 266
Cdd:COG0581 216 NLASspypaaqelAWAAALVLLLL-VLLLNL 245
|
|
| potC |
PRK09500 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
55-207 |
5.42e-06 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 236542 [Multi-domain] Cd Length: 256 Bit Score: 46.52 E-value: 5.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 55 IANPDMLHAIWLTVLIALITVPVNLVFGTLLAWLVTRFNFPGRQLLLTLL-------DIPFAVSPVVaglvylLFYGSNG 127
Cdd:PRK09500 50 FNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKKFVSGMLfvvmmspDIVMAISLLV------LFMLLGI 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 128 PLGGW--LDAHdmqIMFAWPgMALVTIFVTcpfvVRELVPVMLsqgshedEAAILLGASGWQMFRRVTLPNIRWALLYGV 205
Cdd:PRK09500 124 QLGFWslLFAH---ITFCLP-FVVVTVYSR----LKGFDVRML-------EAAKDLGASEFTILRKIILPLALPAVAAGW 188
|
..
gi 490523168 206 VL 207
Cdd:PRK09500 189 LL 190
|
|
| thiP |
TIGR01253 |
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, ... |
62-269 |
9.78e-06 |
|
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, permease protein in bacteria. The protein belongs to the larger ABC transport system. It consists of atleast three components: the inner mebrane permease; thiamine binding protein; an ATP-binding subunit. It has been experimentally demonstrated that the mutants in the various steps in the de novo synthesis of the thiamine and the biologically active form, namely thiamine pyrophosphate can be exogenously supplemented with thiamine, thiamine monophosphate (TMP) or thiamine pyrophosphate (TPP). [Transport and binding proteins, Other]
Pssm-ID: 130320 [Multi-domain] Cd Length: 519 Bit Score: 46.84 E-value: 9.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 62 HAIWLTVLIALITVPVNLVFGTLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDAHDMQIM 141
Cdd:TIGR01253 47 HLILFSFGQAFLSALLSIFFAIFLARALFRKPFLGKKALLKLCALTFILPALVAIFGIIGIYGRQGWLATLANLFGLEWQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 142 F---AWPGMALVTIFVTCPFVVRELVPVMLSQGSHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGA 218
Cdd:TIGR01253 127 FhiyGLQGILIAHLFFNIPLAAQLFLQALENIPGEQRQLAAQLGLQGWHFFKFVEWPVFRQQCLPTAALIFMLCFASFAT 206
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 490523168 219 VSVVSGSIRGETLSLPL-QIELLEQDYNTVGAFtaaALLTLMAILTLFLKSA 269
Cdd:TIGR01253 207 VLSLGGGPQATTIELAIyQAILFDFDLAKAALF---ALLQFVCCLGLFLLSQ 255
|
|
| thiP |
TIGR01253 |
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, ... |
25-266 |
1.57e-05 |
|
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, permease protein in bacteria. The protein belongs to the larger ABC transport system. It consists of atleast three components: the inner mebrane permease; thiamine binding protein; an ATP-binding subunit. It has been experimentally demonstrated that the mutants in the various steps in the de novo synthesis of the thiamine and the biologically active form, namely thiamine pyrophosphate can be exogenously supplemented with thiamine, thiamine monophosphate (TMP) or thiamine pyrophosphate (TPP). [Transport and binding proteins, Other]
Pssm-ID: 130320 [Multi-domain] Cd Length: 519 Bit Score: 46.07 E-value: 1.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 25 MLLSAFILVVPMVYIFAKAFSDGLMPvlENIANPDMLHAIWLTVLIALITVPVNLVFGTLLAWLVTRFNFPGRQLLLTLL 104
Cdd:TIGR01253 288 ILLALFFLFPPLLAIIIDALNSRNLL--EVLANPQLWQALGTSLRIALAAALLALTLAIALLLLSRELEALHKMKAGQFI 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 105 DIPFAVSPVVAGLVYL--LFYGSNGPLGGWLDAhDMQIMFAWPGMALvtifvtcPFVVRELVPVMLSQGSHEDEAAILLG 182
Cdd:TIGR01253 366 EMAGMLILAIPGIVLAmgFFLLLNDRDFLNIDA-DGIVIFCNALMAI-------PFALKILEAPFHDIMARYEMLCNSLG 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 183 ASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSirgETLSLPLQIELLEQDY-NTVGAFTAAALLTLMAI 261
Cdd:TIGR01253 438 IEGWQRFKLIELKALKAPLAQAFAFACALSIGDFGAIALFGND---DFRSLPFLLYQQIGNYrNQDAAVTAGILLLLCFI 514
|
....*
gi 490523168 262 LTLFL 266
Cdd:TIGR01253 515 LFAFI 519
|
|
| 3a0107s02c |
TIGR00974 |
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ... |
26-266 |
1.59e-05 |
|
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273373 Cd Length: 271 Bit Score: 45.30 E-value: 1.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 26 LLSAFILVVPMVYIFAKAFSDGLMPV----LENIANPDM-----LHAIWLTVLIALITVPVNLVFGTLLAWLVTRFNFPG 96
Cdd:TIGR00974 9 LLSALLALLPLIWILWYILIKGLPALnlefFTKSPTPTGaeggiGPAIVGTLLLTLLAIVIAVPLGIGAAIYLAEYANGS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 97 R--QLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGwldahdmqimFAWPGMALVTIFVTCPFVVRELVPVMLSQGSHE 174
Cdd:TIGR00974 89 RftKIIRFAVDILAGVPSIVVGLFGYGFFVLTYLGGG----------FSLLAGALALALLILPVIIRTTEEALKAVPKDL 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 175 DEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSG-------SIRGETLSLPLQIelleqdYNTV 247
Cdd:TIGR00974 159 REASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPLLFTAGgsaftppNLFDPFATLPVLI------YNLA 232
|
250 260
....*....|....*....|....*...
gi 490523168 248 GAFT---------AAALLTLMAILTLFL 266
Cdd:TIGR00974 233 SEGPyveaqqlawAAALVLIVLVLLLNL 260
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
79-265 |
3.58e-05 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 43.44 E-value: 3.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 79 LVFGTLLAwlvTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLdahdmqimfawpgMALVTIFVTCPF 158
Cdd:pfam00528 2 IPLGIIAA---LRRGRRLDRLLRPLIDLLQALPSFVLAILLVVIAILSILGHGIL-------------PAIILALLGWAG 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 159 VVRELVPVMLSQGSHE-DEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVsgsIRGETLSLPLQI 237
Cdd:pfam00528 66 YARLIRRAALRSLPSDlVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFL---GSWPGLGLLLIE 142
|
170 180
....*....|....*....|....*...
gi 490523168 238 ELLEQDYNTVGAFTAAALLTLMAILTLF 265
Cdd:pfam00528 143 AILGYDYPEIQGPVLAAALILLLLNLLV 170
|
|
| PstC |
COG0573 |
ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
176-224 |
1.20e-04 |
|
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440338 [Multi-domain] Cd Length: 303 Bit Score: 42.77 E-value: 1.20e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 490523168 176 EAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSG 224
Cdd:COG0573 188 EAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGETMAVLMVAG 236
|
|
| PRK10592 |
PRK10592 |
putrescine transporter subunit: membrane component of ABC superfamily; Provisional |
60-237 |
1.24e-04 |
|
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
Pssm-ID: 182574 Cd Length: 281 Bit Score: 42.92 E-value: 1.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 60 MLHAIWLTVLIALITVPVNLVFGTLLAWLVTRF-NFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDAHDM 138
Cdd:PRK10592 61 MMSAVGLSLTIAACAATAAAILGTIAAVVMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGM 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 139 QIMFawpgMALVTIfvtCPFVVRELVPVMLSQGSHE-DEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFG 217
Cdd:PRK10592 141 LTIW----LAHVTF---CTAYVAVVISSRLRELDRSiEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLV 213
|
170 180
....*....|....*....|
gi 490523168 218 AVSVVSGSirGETlSLPLQI 237
Cdd:PRK10592 214 IASFVSGP--GAT-TLPMLV 230
|
|
| potB |
PRK09497 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
54-216 |
1.58e-03 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 181910 Cd Length: 285 Bit Score: 39.29 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 54 NIANPDMLHAIWLTVLIALITVPVNLVFGTLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWL 133
Cdd:PRK09497 55 RLLDPLYAEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490523168 134 DAHD-----MQIMFAWPGMALVTIFVTCPFVVRELVPVMLSQGSHEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLT 208
Cdd:PRK09497 135 LWLGvidtpIRIMFTESAVIIGLVYILLPFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLV 214
|
....*...
gi 490523168 209 NARAIGEF 216
Cdd:PRK09497 215 LLPAMGMF 222
|
|
| |
