NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|490580215|ref|WP_004445235|]
View 

MULTISPECIES: transaldolase [Rhizobium/Agrobacterium group]

Protein Classification

transaldolase( domain architecture ID 10792423)

transaldolase transfers a C3 ketol fragment from a ketose donor to an aldose acceptor as part of the non-oxidative branch of the pentose phosphate pathway

EC:  2.2.1.2
Gene Ontology:  GO:0004801

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
PRK05269 PRK05269
transaldolase B; Provisional
1-316 0e+00

transaldolase B; Provisional


:

Pssm-ID: 235381 [Multi-domain]  Cd Length: 318  Bit Score: 586.36  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215   1 MTSKLEQLRAITTVVADTGDIEAVARLKPVDCTTNPTIVLKALGTPAFADAVKEAVAWGKKQGGQSDAVVAAVADRLAIS 80
Cdd:PRK05269   1 MTNKLEQLKQFTTVVADTGDIEAIKKYQPQDATTNPSLILKAAQIPEYAPLIDDAVAWAKQQSGDRAQQIDDAIDKLAVN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  81 VGAALAGLVPGRVSTEVDADLSFDTEASITKARHIIAAYKERGIERERILIKLASTWEGIKAAEVLQSEGIDCNLTLLFS 160
Cdd:PRK05269  81 FGLEILKLIPGRVSTEVDARLSFDTEATIAKARKLIALYEEAGISKDRILIKIASTWEGIRAAEQLEKEGINCNLTLLFS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215 161 QAQAIACAEAKVFLISPFVGRILDWYKKSTGE-NYTAETDPGVVSVRSIYNYYKANGISTVVMGASFRNVGEIEALAGCD 239
Cdd:PRK05269 161 FAQARACAEAGVFLISPFVGRILDWYKKNTGKkEYAPAEDPGVVSVTKIYNYYKKHGYKTVVMGASFRNTGQILELAGCD 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490580215 240 RLTISPALLEELDKDTGKLERKLSADNVKAEPLQSLDEKAFRWALNEDAMATEKLSEGIRLFAKDLVTLREMVRKEL 316
Cdd:PRK05269 241 RLTISPALLEELAASEGELERKLSPPGEAKARPVPLTEAEFRWQHNEDAMATEKLAEGIRKFAKDQEKLEKLIAAKL 317
 
Name Accession Description Interval E-value
PRK05269 PRK05269
transaldolase B; Provisional
1-316 0e+00

transaldolase B; Provisional


Pssm-ID: 235381 [Multi-domain]  Cd Length: 318  Bit Score: 586.36  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215   1 MTSKLEQLRAITTVVADTGDIEAVARLKPVDCTTNPTIVLKALGTPAFADAVKEAVAWGKKQGGQSDAVVAAVADRLAIS 80
Cdd:PRK05269   1 MTNKLEQLKQFTTVVADTGDIEAIKKYQPQDATTNPSLILKAAQIPEYAPLIDDAVAWAKQQSGDRAQQIDDAIDKLAVN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  81 VGAALAGLVPGRVSTEVDADLSFDTEASITKARHIIAAYKERGIERERILIKLASTWEGIKAAEVLQSEGIDCNLTLLFS 160
Cdd:PRK05269  81 FGLEILKLIPGRVSTEVDARLSFDTEATIAKARKLIALYEEAGISKDRILIKIASTWEGIRAAEQLEKEGINCNLTLLFS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215 161 QAQAIACAEAKVFLISPFVGRILDWYKKSTGE-NYTAETDPGVVSVRSIYNYYKANGISTVVMGASFRNVGEIEALAGCD 239
Cdd:PRK05269 161 FAQARACAEAGVFLISPFVGRILDWYKKNTGKkEYAPAEDPGVVSVTKIYNYYKKHGYKTVVMGASFRNTGQILELAGCD 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490580215 240 RLTISPALLEELDKDTGKLERKLSADNVKAEPLQSLDEKAFRWALNEDAMATEKLSEGIRLFAKDLVTLREMVRKEL 316
Cdd:PRK05269 241 RLTISPALLEELAASEGELERKLSPPGEAKARPVPLTEAEFRWQHNEDAMATEKLAEGIRKFAKDQEKLEKLIAAKL 317
Transaldolase_TalAB cd00957
Transaldolases including both TalA and TalB; Transaldolases including both TalA and TalB. The ...
3-312 0e+00

Transaldolases including both TalA and TalB; Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.


Pssm-ID: 188644 [Multi-domain]  Cd Length: 313  Bit Score: 511.01  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215   3 SKLEQLRAITTVVADTGDIEAVARLKPVDCTTNPTIVLKALGTPAFADAVKEAVAWGKKQGGQSDAVVAAVADRLAISVG 82
Cdd:cd00957    1 NQLDQLKKFTTIVADTGDFEAIKKFKPQDATTNPSLILAAAKLPEYNKLVDEAIAYAKKKGGSDEDQISNALDKLLVNFG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  83 AALAGLVPGRVSTEVDADLSFDTEASITKARHIIAAYKERGIERERILIKLASTWEGIKAAEVLQSEGIDCNLTLLFSQA 162
Cdd:cd00957   81 TEILKLIPGRVSTEVDARLSFDTNATIAKARKLIKLYEEAGIDKERILIKIAATWEGIQAAKQLEKEGIHCNLTLLFSFA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215 163 QAIACAEAKVFLISPFVGRILDWYKKSTG-ENYTAETDPGVVSVRSIYNYYKANGISTVVMGASFRNVGEIEALAGCDRL 241
Cdd:cd00957  161 QAVACAEAGVTLISPFVGRILDWYKKHSGdKAYTAEEDPGVASVKKIYNYYKKFGYKTKVMGASFRNIGQILALAGCDYL 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490580215 242 TISPALLEELDKDTGKLERKLSADNVKAEPLQS--LDEKAFRWALNEDAMATEKLSEGIRLFAKDLVTLREMV 312
Cdd:cd00957  241 TISPALLEELKNSTAKVERKLDPAASKALDIHPnfLDESAFRWALNEDAMAVEKLSEGIRGFAKDAVKLEKLI 313
talAB TIGR00874
transaldolase; This family includes the majority of known and predicted transaldolase ...
3-316 3.20e-163

transaldolase; This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis. [Energy metabolism, Pentose phosphate pathway]


Pssm-ID: 162081  Cd Length: 317  Bit Score: 457.30  E-value: 3.20e-163
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215    3 SKLEQLRAITTVVADTGDIEAVARLKPVDCTTNPTIVLKALGTPAFADAVKEAVAWGKKQGGQSDAVVAAVADRLAISVG 82
Cdd:TIGR00874   1 NQLDQLKQFTVVVADTGDIEAIKKYQPQDATTNPSLILAAAQLPKYAELIDEAVAWGKKQGKDDAQQVENALDKLAVNFG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215   83 AALAGLVPGRVSTEVDADLSFDTEASITKARHIIAAYKERGIERERILIKLASTWEGIKAAEVLQSEGIDCNLTLLFSQA 162
Cdd:TIGR00874  81 LEILKIVPGRVSTEVDARLSFDTEATVEKARHLIKLYEDAGVDKKRILIKIASTWEGIRAAEELEKEGIHCNLTLLFSFV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  163 QAIACAEAKVFLISPFVGRILDWYKKSTG-ENYTAETDPGVVSVRSIYNYYKANGISTVVMGASFRNVGEIEALAGCDRL 241
Cdd:TIGR00874 161 QAIACAEAKVTLISPFVGRILDWYKAATGkKEYSIEEDPGVASVKKIYNYYKKHGYPTEVMGASFRNKEEILALAGCDRL 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 490580215  242 TISPALLEELDKDTGKLERKL---SADNVKAEPlQSLDEKAFRWALNEDAMATEKLSEGIRLFAKDLVTLREMVRKEL 316
Cdd:TIGR00874 241 TISPALLDELKESTGPVERKLdpeSAKKVDKQP-IILDESEFRFLHNEDAMATEKLAEGIRKFAADQEKLEKLLEEKL 317
TAL_FSA pfam00923
Transaldolase/Fructose-6-phosphate aldolase; Transaldolase (TAL) is an enzyme of the pentose ...
14-256 5.22e-88

Transaldolase/Fructose-6-phosphate aldolase; Transaldolase (TAL) is an enzyme of the pentose phosphate pathway (PPP) found almost ubiquitously in the three domains of life (Archaea, Bacteria, and Eukarya). TAL shares a high degree of structural similarity and sequence identity with fructose-6-phosphate aldolase (FSA). They both belong to the class I aldolase family. Their protein structures have been revealed.


Pssm-ID: 395737 [Multi-domain]  Cd Length: 226  Bit Score: 262.86  E-value: 5.22e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215   14 VVADTGDIEAVARLKP----VDCTTNPTIVLKAL-GTPAFADAVKEavawgkkqggqsdavvaavadrlaisvgaaLAGL 88
Cdd:pfam00923   1 IWLDTADRDLIKKLIEeggiDGVTTNPSIFLKAIeYSALYDEAIAE------------------------------IKEI 50
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215   89 VPGRVSTEVDADLSFDTEASITKARHIIAAYkergiERERILIKLASTWEGIKAAEVLQSEGIDCNLTLLFSQAQAIACA 168
Cdd:pfam00923  51 GDGPVSLEVDPRLADDTEGTIEEARRLIALY-----GRPNVLIKIPATWEGIKAIKELSAEGINVNVTLIFSLAQALAAA 125
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  169 EAKVFLISPFVGRILDWYKKSTGEnyTAETDPGVVSVRSIYNYYKANGISTVVMGASFRNVGEIEALAGCDRLTISPALL 248
Cdd:pfam00923 126 EAGASVISPFVGRIDDWGDKRLGA--ALRGDDGIANAKEIYQIYKKYGWSTGVLAASFRNVLYVLALAGCDTITIPPDTL 203

                  ....*...
gi 490580215  249 EELDKDTG 256
Cdd:pfam00923 204 EALAKDEG 211
TalA COG0176
Transaldolase/fructose-6-phosphate aldolase [Carbohydrate transport and metabolism]; ...
12-254 7.52e-69

Transaldolase/fructose-6-phosphate aldolase [Carbohydrate transport and metabolism]; Transaldolase/fructose-6-phosphate aldolase is part of the Pathway/BioSystem: Pentose phosphate pathway


Pssm-ID: 439946 [Multi-domain]  Cd Length: 214  Bit Score: 213.78  E-value: 7.52e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  12 TTVVADTGDIEAVARLK----PVDCTTNPTIVLKALGTPAFADavkeavawgkkqggqsdavvaavadrlaisvGAALAG 87
Cdd:COG0176    1 MKLWLDTADREEIKELIdlggVDGVTTNPSLIAKAGIKDFVED-------------------------------IREICD 49
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  88 LVPGRVSTEVdadLSFDTEASITKARHIIAAYkergieRERILIKLASTWEGIKAAEVLQSEGIDCNLTLLFSQAQAIAC 167
Cdd:COG0176   50 IVDGPVSAEV---LATDTEGMIAEARRLAALY------RPNVVIKIPATEEGLKAIEELSAEGIKVNVTLIFSAAQALLA 120
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215 168 AEAKVFLISPFVGRILDWykkstGENytaetdpGVVSVRSIYNYYKANGISTVVMGASFRNVGEIE--ALAGCDRLTISP 245
Cdd:COG0176  121 AEAGASYVSPFVGRIDDI-----GID-------GIALVREIYQIYKNYGARTRILAASFRNPLQVLeaALAGADTVTIPP 188

                 ....*....
gi 490580215 246 ALLEELDKD 254
Cdd:COG0176  189 AVLEALADH 197
 
Name Accession Description Interval E-value
PRK05269 PRK05269
transaldolase B; Provisional
1-316 0e+00

transaldolase B; Provisional


Pssm-ID: 235381 [Multi-domain]  Cd Length: 318  Bit Score: 586.36  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215   1 MTSKLEQLRAITTVVADTGDIEAVARLKPVDCTTNPTIVLKALGTPAFADAVKEAVAWGKKQGGQSDAVVAAVADRLAIS 80
Cdd:PRK05269   1 MTNKLEQLKQFTTVVADTGDIEAIKKYQPQDATTNPSLILKAAQIPEYAPLIDDAVAWAKQQSGDRAQQIDDAIDKLAVN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  81 VGAALAGLVPGRVSTEVDADLSFDTEASITKARHIIAAYKERGIERERILIKLASTWEGIKAAEVLQSEGIDCNLTLLFS 160
Cdd:PRK05269  81 FGLEILKLIPGRVSTEVDARLSFDTEATIAKARKLIALYEEAGISKDRILIKIASTWEGIRAAEQLEKEGINCNLTLLFS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215 161 QAQAIACAEAKVFLISPFVGRILDWYKKSTGE-NYTAETDPGVVSVRSIYNYYKANGISTVVMGASFRNVGEIEALAGCD 239
Cdd:PRK05269 161 FAQARACAEAGVFLISPFVGRILDWYKKNTGKkEYAPAEDPGVVSVTKIYNYYKKHGYKTVVMGASFRNTGQILELAGCD 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490580215 240 RLTISPALLEELDKDTGKLERKLSADNVKAEPLQSLDEKAFRWALNEDAMATEKLSEGIRLFAKDLVTLREMVRKEL 316
Cdd:PRK05269 241 RLTISPALLEELAASEGELERKLSPPGEAKARPVPLTEAEFRWQHNEDAMATEKLAEGIRKFAKDQEKLEKLIAAKL 317
Transaldolase_TalAB cd00957
Transaldolases including both TalA and TalB; Transaldolases including both TalA and TalB. The ...
3-312 0e+00

Transaldolases including both TalA and TalB; Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.


Pssm-ID: 188644 [Multi-domain]  Cd Length: 313  Bit Score: 511.01  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215   3 SKLEQLRAITTVVADTGDIEAVARLKPVDCTTNPTIVLKALGTPAFADAVKEAVAWGKKQGGQSDAVVAAVADRLAISVG 82
Cdd:cd00957    1 NQLDQLKKFTTIVADTGDFEAIKKFKPQDATTNPSLILAAAKLPEYNKLVDEAIAYAKKKGGSDEDQISNALDKLLVNFG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  83 AALAGLVPGRVSTEVDADLSFDTEASITKARHIIAAYKERGIERERILIKLASTWEGIKAAEVLQSEGIDCNLTLLFSQA 162
Cdd:cd00957   81 TEILKLIPGRVSTEVDARLSFDTNATIAKARKLIKLYEEAGIDKERILIKIAATWEGIQAAKQLEKEGIHCNLTLLFSFA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215 163 QAIACAEAKVFLISPFVGRILDWYKKSTG-ENYTAETDPGVVSVRSIYNYYKANGISTVVMGASFRNVGEIEALAGCDRL 241
Cdd:cd00957  161 QAVACAEAGVTLISPFVGRILDWYKKHSGdKAYTAEEDPGVASVKKIYNYYKKFGYKTKVMGASFRNIGQILALAGCDYL 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490580215 242 TISPALLEELDKDTGKLERKLSADNVKAEPLQS--LDEKAFRWALNEDAMATEKLSEGIRLFAKDLVTLREMV 312
Cdd:cd00957  241 TISPALLEELKNSTAKVERKLDPAASKALDIHPnfLDESAFRWALNEDAMAVEKLSEGIRGFAKDAVKLEKLI 313
PRK12346 PRK12346
transaldolase A; Provisional
2-316 7.85e-165

transaldolase A; Provisional


Pssm-ID: 183458  Cd Length: 316  Bit Score: 461.50  E-value: 7.85e-165
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215   2 TSKLEQLRAITTVVADTGDIEAVARLKPVDCTTNPTIVLKALGTPAFADAVKEAVAWGKKQGGQSDAVVAAVADRLAISV 81
Cdd:PRK12346   1 MNQLDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGLPQYQHLIDDAIAWGKKQGGTQEQQVVAACDKLAVNF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  82 GAALAGLVPGRVSTEVDADLSFDTEASITKARHIIAAYKERGIERERILIKLASTWEGIKAAEVLQSEGIDCNLTLLFSQ 161
Cdd:PRK12346  81 GAEILKSVPGRVSTEVDARLSFDREKSIEKARHLVDLYQQQGIDKSRILIKLASTWEGIRAAEELEKEGINCNLTLLFSF 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215 162 AQAIACAEAKVFLISPFVGRILDWYKKSTG-ENYTAETDPGVVSVRSIYNYYKANGISTVVMGASFRNVGEIEALAGCDR 240
Cdd:PRK12346 161 AQARACAEAGVFLISPFVGRIYDWYQARKPmDPYVVEEDPGVKSVRNIYDYYKQHRYETIVMGASFRRTEQILALAGCDR 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 490580215 241 LTISPALLEELDKDTGKLERKLSADNVKAEPLQSLDEKAFRWALNEDAMATEKLSEGIRLFAKDLVTLREMVRKEL 316
Cdd:PRK12346 241 LTISPNLLKELQESESPVERKLIPSSQTFPRPAPMSEAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL 316
talAB TIGR00874
transaldolase; This family includes the majority of known and predicted transaldolase ...
3-316 3.20e-163

transaldolase; This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis. [Energy metabolism, Pentose phosphate pathway]


Pssm-ID: 162081  Cd Length: 317  Bit Score: 457.30  E-value: 3.20e-163
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215    3 SKLEQLRAITTVVADTGDIEAVARLKPVDCTTNPTIVLKALGTPAFADAVKEAVAWGKKQGGQSDAVVAAVADRLAISVG 82
Cdd:TIGR00874   1 NQLDQLKQFTVVVADTGDIEAIKKYQPQDATTNPSLILAAAQLPKYAELIDEAVAWGKKQGKDDAQQVENALDKLAVNFG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215   83 AALAGLVPGRVSTEVDADLSFDTEASITKARHIIAAYKERGIERERILIKLASTWEGIKAAEVLQSEGIDCNLTLLFSQA 162
Cdd:TIGR00874  81 LEILKIVPGRVSTEVDARLSFDTEATVEKARHLIKLYEDAGVDKKRILIKIASTWEGIRAAEELEKEGIHCNLTLLFSFV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  163 QAIACAEAKVFLISPFVGRILDWYKKSTG-ENYTAETDPGVVSVRSIYNYYKANGISTVVMGASFRNVGEIEALAGCDRL 241
Cdd:TIGR00874 161 QAIACAEAKVTLISPFVGRILDWYKAATGkKEYSIEEDPGVASVKKIYNYYKKHGYPTEVMGASFRNKEEILALAGCDRL 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 490580215  242 TISPALLEELDKDTGKLERKL---SADNVKAEPlQSLDEKAFRWALNEDAMATEKLSEGIRLFAKDLVTLREMVRKEL 316
Cdd:TIGR00874 241 TISPALLDELKESTGPVERKLdpeSAKKVDKQP-IILDESEFRFLHNEDAMATEKLAEGIRKFAADQEKLEKLLEEKL 317
PTZ00411 PTZ00411
transaldolase-like protein; Provisional
1-319 2.14e-157

transaldolase-like protein; Provisional


Pssm-ID: 240406  Cd Length: 333  Bit Score: 443.03  E-value: 2.14e-157
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215   1 MTSKLEQLRAITTVVADTGDIEAVARLKPVDCTTNPTIVLKALGTPAFADAVKEAVAWGKKQGGQS----------DAVV 70
Cdd:PTZ00411   1 MPNQLEALKEHTTVVADTGDFSLLKKFQPEDATTNPSLVLAAAQMPEYAHLIDDAIKYAKANVSRLrdpllsdeekEELV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  71 AAVADRLAISVGAALAGLVPGRVSTEVDADLSFDTEASITKARHIIAAYKERGIERERILIKLASTWEGIKAAEVLQSEG 150
Cdd:PTZ00411  81 ELVVDKLTVNFGVEILKIVPGRVSTEVDARLSFDKQAMVDKARKIIKMYEEAGISKDRILIKLASTWEGIQAAKALEKEG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215 151 IDCNLTLLFSQAQAIACAEAKVFLISPFVGRILDWYKKSTG-ENYTAETDPGVVSVRSIYNYYKANGISTVVMGASFRNV 229
Cdd:PTZ00411 161 IHCNLTLLFSFAQAVACAQAGVTLISPFVGRILDWYKKPEKaESYVGAQDPGVISVTKIYNYYKKHGYKTIVMGASFRNT 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215 230 GEIEALAGCDRLTISPALLEELDK-DTGKLERKLSADNVKA--EPLQSLDEKAFRWALNEDAMATEKLSEGIRLFAKDLV 306
Cdd:PTZ00411 241 GEILELAGCDKLTISPKLLEELANtEDGPVERKLDPEKLTEdtEKLPELTEKEFRWELNEDAMATEKLAEGIRNFAKDLE 320
                        330
                 ....*....|...
gi 490580215 307 TLREMVRKELTAA 319
Cdd:PTZ00411 321 KLENVIRAKLTEA 333
PRK12309 PRK12309
transaldolase;
1-317 1.03e-147

transaldolase;


Pssm-ID: 183426 [Multi-domain]  Cd Length: 391  Bit Score: 420.68  E-value: 1.03e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215   1 MTSKLEQLRAITTVVADTGDIEAVARLKPVDCTTNPTIVLKALGTPAFADAVKEAVAWGKKQGGQS---DAVVAAVADRL 77
Cdd:PRK12309   2 MASLLEQLRQMTVVVADTGDIQAIEKFTPRDATTNPSLITAAAQMPQYQSIVDETLRQARKELGSDapvEDVVALAFDRL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  78 AISVGAALAGLVPGRVSTEVDADLSFDTEASITKARHIIAAYKERGIERERILIKLASTWEGIKAAEVLQSEGIDCNLTL 157
Cdd:PRK12309  82 AVAFGLKILKIVPGRVSTEVDARLSYDTEATIAKARKLISLYEDAGISRDRVLIKIASTWEGIKAAEVLEKEGIHCNLTL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215 158 LFSQAQAIACAEAKVFLISPFVGRILDWYKKSTG-ENYTAETDPGVVSVRSIYNYYKANGISTVVMGASFRNVGEIEALA 236
Cdd:PRK12309 162 LFGFHQAIACAEAGVTLISPFVGRILDWYKKETGrDSYPGAEDPGVQSVTQIYNYYKKFGYKTEVMGASFRNIGEIIELA 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215 237 GCDRLTISPALLEELDKDTGKLERKLSADNVKAEPLQ--SLDEKAFRWALNEDAMATEKLSEGIRLFAKDLVTLREMVRK 314
Cdd:PRK12309 242 GCDLLTISPKLLEQLRSTEAELPRKLDPANAAGMEIEkiHMDRATFDKMHAEDRMASEKLDEGIKGFSKALETLEKLLAH 321

                 ...
gi 490580215 315 ELT 317
Cdd:PRK12309 322 RLA 324
TAL_FSA pfam00923
Transaldolase/Fructose-6-phosphate aldolase; Transaldolase (TAL) is an enzyme of the pentose ...
14-256 5.22e-88

Transaldolase/Fructose-6-phosphate aldolase; Transaldolase (TAL) is an enzyme of the pentose phosphate pathway (PPP) found almost ubiquitously in the three domains of life (Archaea, Bacteria, and Eukarya). TAL shares a high degree of structural similarity and sequence identity with fructose-6-phosphate aldolase (FSA). They both belong to the class I aldolase family. Their protein structures have been revealed.


Pssm-ID: 395737 [Multi-domain]  Cd Length: 226  Bit Score: 262.86  E-value: 5.22e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215   14 VVADTGDIEAVARLKP----VDCTTNPTIVLKAL-GTPAFADAVKEavawgkkqggqsdavvaavadrlaisvgaaLAGL 88
Cdd:pfam00923   1 IWLDTADRDLIKKLIEeggiDGVTTNPSIFLKAIeYSALYDEAIAE------------------------------IKEI 50
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215   89 VPGRVSTEVDADLSFDTEASITKARHIIAAYkergiERERILIKLASTWEGIKAAEVLQSEGIDCNLTLLFSQAQAIACA 168
Cdd:pfam00923  51 GDGPVSLEVDPRLADDTEGTIEEARRLIALY-----GRPNVLIKIPATWEGIKAIKELSAEGINVNVTLIFSLAQALAAA 125
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  169 EAKVFLISPFVGRILDWYKKSTGEnyTAETDPGVVSVRSIYNYYKANGISTVVMGASFRNVGEIEALAGCDRLTISPALL 248
Cdd:pfam00923 126 EAGASVISPFVGRIDDWGDKRLGA--ALRGDDGIANAKEIYQIYKKYGWSTGVLAASFRNVLYVLALAGCDTITIPPDTL 203

                  ....*...
gi 490580215  249 EELDKDTG 256
Cdd:pfam00923 204 EALAKDEG 211
TalA COG0176
Transaldolase/fructose-6-phosphate aldolase [Carbohydrate transport and metabolism]; ...
12-254 7.52e-69

Transaldolase/fructose-6-phosphate aldolase [Carbohydrate transport and metabolism]; Transaldolase/fructose-6-phosphate aldolase is part of the Pathway/BioSystem: Pentose phosphate pathway


Pssm-ID: 439946 [Multi-domain]  Cd Length: 214  Bit Score: 213.78  E-value: 7.52e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  12 TTVVADTGDIEAVARLK----PVDCTTNPTIVLKALGTPAFADavkeavawgkkqggqsdavvaavadrlaisvGAALAG 87
Cdd:COG0176    1 MKLWLDTADREEIKELIdlggVDGVTTNPSLIAKAGIKDFVED-------------------------------IREICD 49
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  88 LVPGRVSTEVdadLSFDTEASITKARHIIAAYkergieRERILIKLASTWEGIKAAEVLQSEGIDCNLTLLFSQAQAIAC 167
Cdd:COG0176   50 IVDGPVSAEV---LATDTEGMIAEARRLAALY------RPNVVIKIPATEEGLKAIEELSAEGIKVNVTLIFSAAQALLA 120
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215 168 AEAKVFLISPFVGRILDWykkstGENytaetdpGVVSVRSIYNYYKANGISTVVMGASFRNVGEIE--ALAGCDRLTISP 245
Cdd:COG0176  121 AEAGASYVSPFVGRIDDI-----GID-------GIALVREIYQIYKNYGARTRILAASFRNPLQVLeaALAGADTVTIPP 188

                 ....*....
gi 490580215 246 ALLEELDKD 254
Cdd:COG0176  189 AVLEALADH 197
Transaldolase cd00439
Transaldolase; Transaldolase. Enzymes found in the non-oxidative branch of the pentose ...
13-251 6.57e-60

Transaldolase; Transaldolase. Enzymes found in the non-oxidative branch of the pentose phosphate pathway, that catalyze the reversible transfer of a dihydroxyacetone group from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. They are members of the class I aldolases, who are characterized by using a Schiff-base mechanism for stabilization of the reaction intermediates.


Pssm-ID: 188631 [Multi-domain]  Cd Length: 252  Bit Score: 192.18  E-value: 6.57e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  13 TVVADTGDIEAVARLK----PVDCTTNPTIVLKALGTPAFADAVKEAVAWGKKQGGQSDAVVAAVADRLAISVGAAL--A 86
Cdd:cd00439    1 SPWYDTLDRPATDLLPlirgVRGVTTNPSIIQAAISTSNAYNDQFRTLVESGKDIESAYWELVVKDIQDACKLFEPIydQ 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  87 GLVPGRVSTEVDADLSFDTEASITKARHIIAAYKERgiereRILIKLASTWEGIKAAEVLQSEGIDCNLTLLFSQAQAIA 166
Cdd:cd00439   81 TEADGRVSVEVSARLADDTQGMVEAAKYLSKVVNRR-----NIYIKIPATAEGIPAIKDLIAAGISVNVTLIFSIAQYEA 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215 167 CAEAKVFLISPFVGRILDWYKKSTGE-NYTAETDPGVVSVRSIYNYYKANGISTVVMGASFRNVGEIEALAGCDRLTISP 245
Cdd:cd00439  156 VADAGTSVASPFVSRIDTLMDKMLEQiGLDLRGKAGVAQVTLAYKLYKQKFKKQRVLWASFSDTLYVAPLIGCDTVTTMP 235

                 ....*.
gi 490580215 246 ALLEEL 251
Cdd:cd00439  236 DQALEA 241
Transaldolase_FSA cd00956
Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea; ...
16-254 2.92e-27

Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea; Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea, which are member of the MipB/TalC subfamily of class I aldolases. FSA catalyze an aldol cleavage of fructose 6-phosphate and do not utilize fructose, fructose 1-phosphate, fructose 1,6-phosphate, or dihydroxyacetone phosphate. The enzymes belong to the transaldolase family that serves in transfer reactions in the pentose phosphate cycle, and are more distantly related to fructose 1,6-bisphosphate aldolase.


Pssm-ID: 188643 [Multi-domain]  Cd Length: 211  Bit Score: 105.74  E-value: 2.92e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  16 ADTGDIEAVARLKPVD-CTTNPTIVLKAlGTPAFADAVKEAVAwgkkqggqsdavvaavadrlaisvgaalagLVPGRVS 94
Cdd:cd00956    7 ADLEEIKKASETGLLDgVTTNPSLIAKS-GRIDFEAVLKEICE------------------------------IIDGPVS 55
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  95 TEVDADlsfDTEASITKARHIIAaykergiERERILIKLASTWEGIKAAEVLQSEGIDCNLTLLFSQAQAIACAEAKVFL 174
Cdd:cd00956   56 AQVVST---DAEGMVAEARKLAS-------LGGNVVVKIPVTEDGLKAIKKLSEEGIKTNVTAIFSAAQALLAAKAGATY 125
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215 175 ISPFVGRILDwykksTGENytaetdpGVVSVRSIYNYYKANGISTVVMGASFRNVGEI--EALAGCDRLTISPALLEELD 252
Cdd:cd00956  126 VSPFVGRIDD-----LGGD-------GMELIREIRTIFDNYGFDTKILAASIRNPQHVieAALAGADAITLPPDVLEQLL 193

                 ..
gi 490580215 253 KD 254
Cdd:cd00956  194 KH 195
Transaldolase_like cd00955
Transaldolase-like proteins from plants and bacteria; Transaldolase-like proteins from plants ...
33-303 4.22e-21

Transaldolase-like proteins from plants and bacteria; Transaldolase-like proteins from plants and bacteria. Transaldolase is found in the non-oxidative branch of the pentose phosphate pathway, that catalyze the reversible transfer of a dihydroxyacetone group from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. They are members of the class I aldolases, who are characterized by using a Schiff-base mechanism for stabilization of the reaction intermediates.


Pssm-ID: 188642 [Multi-domain]  Cd Length: 338  Bit Score: 92.00  E-value: 4.22e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  33 TTNPTIVLKALGTpafADAVKEAVAWGKKQGGQSDAVVAAVADRLAISVGAALA------GLVPGRVSTEVDADLSFDTE 106
Cdd:cd00955   30 TSNPAIFEKAIAG---SAAYDDQIRALKGQGLDAEAIYEALAIEDIQDACDLLApvyeqtGGNDGYVSLEVSPRLADDTQ 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215 107 ASITKARHIIAAykergIERERILIKLASTWEGIKAAEVLQSEGIDCNLTLLFSQAQAIACAEA---------------- 170
Cdd:cd00955  107 GTIAEAKRLWKA-----VGRPNLMIKIPATEAGLPAIEELIAAGISVNVTLIFSLEQYEAVAEAylrglerrvegggdls 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215 171 -KVFLISPFVGRIlDWYKKSTGENYTAETDPGVVSV---RSIYNYYK---------------ANGI-----STVVMGASF 226
Cdd:cd00955  182 qVASVASFFVSRV-DTLIDKKLDAPEAKALQGKVAIanaKLAYQEYQekfsgprwaalaaagAKPQrllwaSTGVKNPAY 260
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490580215 227 RNVGEIEALAGCDRLTISPALLEELDKDTGKLERKLSADNVKAEPLQSLDEKAfrwALNEDAMATEKLSEGIRLFAK 303
Cdd:cd00955  261 PDVLYVEELIGPDTVNTMPDATLKAFADHGEVRPTLEEGLEEAERVLAELERL---GIDLDAVTEKLLKEGVKKFKD 334
fsa_talC_mipB TIGR00875
fructose-6-phosphate aldolase, TalC/MipB family; This model represents a family that includes ...
16-251 2.73e-17

fructose-6-phosphate aldolase, TalC/MipB family; This model represents a family that includes the E. coli transaldolase homologs TalC and MipB, both shown to be fructose-6-phosphate aldolases rather than transaldolases as previously thought. It is related to but distinct from the transaldolase family of E. coli TalA and TalB. The member from Bacillus subtilis becomes phosphorylated during early stationary phase but not during exponential growth. [Energy metabolism, Pentose phosphate pathway]


Pssm-ID: 129953 [Multi-domain]  Cd Length: 213  Bit Score: 79.13  E-value: 2.73e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215   16 ADTGDIEAVARLKPVD-CTTNPTIVLKAlgTPAFADAVKEavawgkkqggqsdavvaavadrlaisvgaaLAGLVPGRVS 94
Cdd:TIGR00875   8 ANVEEIKKAAELGILAgVTTNPSLIAKE--GRSFWEVLKE------------------------------IQEAVEGPVS 55
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215   95 TEVdadLSFDTEASITKARHIIAAYkergierERILIKLASTWEGIKAAEVLQSEGIDCNLTLLFSQAQAIACAEAKVFL 174
Cdd:TIGR00875  56 AET---ISLDAEGMVEEAKELAKLA-------PNIVVKIPMTSEGLKAVKILKKEGIKTNVTLVFSAAQALLAAKAGATY 125
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490580215  175 ISPFVGRILDwykksTGENytaetdpGVVSVRSIYNYYKANGISTVVMGASFRNVGEI--EALAGCDRLTISPALLEEL 251
Cdd:TIGR00875 126 VSPFVGRLDD-----IGGD-------GMKLIEEVKTIFENHAPDTEVIAASVRHPRHVleAALIGADIATMPLDVMQQL 192
PRK03343 PRK03343
transaldolase; Validated
33-170 3.74e-17

transaldolase; Validated


Pssm-ID: 235117  Cd Length: 368  Bit Score: 81.02  E-value: 3.74e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  33 TTNPTIVLKAL-GTPAFADAVKEAVAWGKkqgGQSDAV-------VAAVADRLAiSVGAALAGlVPGRVSTEVDADLSFD 104
Cdd:PRK03343  43 TSNPAIFQKAIaGGDAYDAQIAELAAAGA---DVEEAYeelttadVRNACDVLR-PVYEATGG-VDGRVSIEVSPRLAHD 117
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 490580215 105 TEASITKARHIIAAykergIERERILIKLASTWEGIKAAEVLQSEGIDCNLTLLFSQAQAIACAEA 170
Cdd:PRK03343 118 TEATIAEARRLWAA-----VDRPNLMIKIPATPEGLPAIEALIAEGISVNVTLIFSVERYRAVADA 178
PRK09533 PRK09533
bifunctional transaldolase/phosoglucose isomerase; Validated
33-170 8.00e-15

bifunctional transaldolase/phosoglucose isomerase; Validated


Pssm-ID: 236551 [Multi-domain]  Cd Length: 948  Bit Score: 75.01  E-value: 8.00e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  33 TTNPTIVLKALG-TPAFADAVKEAVAWGkkqggqsDAVVAAVADRLAIS-VGAALAGLVP---------GRVSTEVDADL 101
Cdd:PRK09533  42 TSNPAIFEKAIGsSDEYDDAIKAALAEG-------DRSVIELYETLAIEdIQAAADVLRPvydatdgadGFVSLEVSPYL 114
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490580215 102 SFDTEASITKARHIIAAykergIERERILIKLASTWEGIKAAEVLQSEGIDCNLTLLFSQAQAIACAEA 170
Cdd:PRK09533 115 ALDTEGTIAEARRLWAA-----VDRPNLMIKVPATPEGLPAIRQLIAEGINVNVTLLFSQDVYEEVAEA 178
PRK03903 PRK03903
transaldolase; Provisional
91-182 1.25e-10

transaldolase; Provisional


Pssm-ID: 235171  Cd Length: 274  Bit Score: 61.15  E-value: 1.25e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  91 GRVSTEVDADLSFDTEASITKARHIiaaYKerGIERERILIKLASTWEGIKAAEVLQSEGIDCNLTLLFSQAQAIACAEA 170
Cdd:PRK03903  43 GFISIEIDPFLEDDAAGSIEEGKRL---YK--TIGRPNVMIKVPATKAGYEAMSALMKKGISVNATLIFSPEQAKECAEA 117
                         90       100
                 ....*....|....*....|...
gi 490580215 171 -----KVF------LISPFVGRI 182
Cdd:PRK03903 118 lneglKKNtkdpkaVISVFVSRF 140
PRK12653 PRK12653
fructose-6-phosphate aldolase; Reviewed
17-243 3.26e-04

fructose-6-phosphate aldolase; Reviewed


Pssm-ID: 183653 [Multi-domain]  Cd Length: 220  Bit Score: 41.30  E-value: 3.26e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  17 DTGDIEAVARLKPV----DCTTNPTIVLKalgtpafadavkeavawgkkqGGQSDAVVAAvadrlaiSVGAALAGlvPGR 92
Cdd:PRK12653   6 DTSDVVAVKALSRIfplaGVTTNPSIIAA---------------------GKKPLEVVLP-------QLHEAMGG--QGR 55
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580215  93 VSTEVDADlsfDTEASITKARHIiaaykeRGIERErILIKLASTWEGIKAAEVLQSEGIDCNLTLLFSQAQAIACAEAKV 172
Cdd:PRK12653  56 LFAQVMAT---TAEGMVNDARKL------RSIIAD-IVVKVPVTAEGLAAIKMLKAEGIPTLGTAVYGAAQGLLSALAGA 125
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490580215 173 FLISPFVGRIldwykkstgenyTAETDPGVVSVRSIYNYYKANGISTVVMGASFRNVGEIEA--LAGCDRLTI 243
Cdd:PRK12653 126 EYVAPYVNRI------------DAQGGSGIQTVTDLQQLLKMHAPQAKVLAASFKTPRQALDclLAGCESITL 186
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH