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Conserved domains on  [gi|490580759|ref|WP_004445779|]
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MULTISPECIES: DUF1192 domain-containing protein [Rhizobium/Agrobacterium group]

Protein Classification

DUF1192 domain-containing protein( domain architecture ID 10009369)

DUF1192 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG5509 COG5509
Uncharacterized small protein, DUF1192 family [Function unknown];
3-63 2.37e-21

Uncharacterized small protein, DUF1192 family [Function unknown];


:

Pssm-ID: 444260  Cd Length: 62  Bit Score: 77.99  E-value: 2.37e-21
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 490580759  3 LFDDDRPQ-KPAAHQIGSDLSLLSVDELDSRIELLQAEITRLEEERKRKSAGRQAAENLFRS 63
Cdd:COG5509   1 MDDDDEPRpKPAAHLIGEDLSLLSVDELEERIALLEAEIARLEAEIAAKQASRAAAEALFKK 62
 
Name Accession Description Interval E-value
COG5509 COG5509
Uncharacterized small protein, DUF1192 family [Function unknown];
3-63 2.37e-21

Uncharacterized small protein, DUF1192 family [Function unknown];


Pssm-ID: 444260  Cd Length: 62  Bit Score: 77.99  E-value: 2.37e-21
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 490580759  3 LFDDDRPQ-KPAAHQIGSDLSLLSVDELDSRIELLQAEITRLEEERKRKSAGRQAAENLFRS 63
Cdd:COG5509   1 MDDDDEPRpKPAAHLIGEDLSLLSVDELEERIALLEAEIARLEAEIAAKQASRAAAEALFKK 62
DUF1192 pfam06698
Protein of unknown function (DUF1192); This family consists of several short, hypothetical, ...
 5-62 5.61e-20

Protein of unknown function (DUF1192); This family consists of several short, hypothetical, bacterial proteins of around 60 residues in length. The function of this family is unknown.


Pssm-ID: 429077 [Multi-domain]  Cd Length: 58  Bit Score: 74.19  E-value: 5.61e-20
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 490580759   5 DDDRPQKPAAHQIGSDLSLLSVDELDSRIELLQAEITRLEEERKRKSAGRQAAENLFR 62
Cdd:pfam06698  1 DDDLPRKKPTHEIGQDLSLLSVEELEERIALLQAEIARLEAAIAKKRASRAAAEALFK 58
 
Name Accession Description Interval E-value
COG5509 COG5509
Uncharacterized small protein, DUF1192 family [Function unknown];
3-63 2.37e-21

Uncharacterized small protein, DUF1192 family [Function unknown];


Pssm-ID: 444260  Cd Length: 62  Bit Score: 77.99  E-value: 2.37e-21
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 490580759  3 LFDDDRPQ-KPAAHQIGSDLSLLSVDELDSRIELLQAEITRLEEERKRKSAGRQAAENLFRS 63
Cdd:COG5509   1 MDDDDEPRpKPAAHLIGEDLSLLSVDELEERIALLEAEIARLEAEIAAKQASRAAAEALFKK 62
DUF1192 pfam06698
Protein of unknown function (DUF1192); This family consists of several short, hypothetical, ...
 5-62 5.61e-20

Protein of unknown function (DUF1192); This family consists of several short, hypothetical, bacterial proteins of around 60 residues in length. The function of this family is unknown.


Pssm-ID: 429077 [Multi-domain]  Cd Length: 58  Bit Score: 74.19  E-value: 5.61e-20
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 490580759   5 DDDRPQKPAAHQIGSDLSLLSVDELDSRIELLQAEITRLEEERKRKSAGRQAAENLFR 62
Cdd:pfam06698  1 DDDLPRKKPTHEIGQDLSLLSVEELEERIALLQAEIARLEAAIAKKRASRAAAEALFK 58
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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