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Conserved domains on  [gi|490873974|ref|WP_004735975|]
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MULTISPECIES: UTP--glucose-1-phosphate uridylyltransferase GalU [Vibrio]

Protein Classification

UTP--glucose-1-phosphate uridylyltransferase GalU( domain architecture ID 10795685)

UTP--glucose-1-phosphate uridylyltransferase GalU may play a role in stationary phase survival

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
galU TIGR01099
UTP--glucose-1-phosphate uridylyltransferase; Built to distinquish between the highly similar ...
3-263 7.79e-167

UTP--glucose-1-phosphate uridylyltransferase; Built to distinquish between the highly similar genes galU and galF [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]


:

Pssm-ID: 273443 [Multi-domain]  Cd Length: 260  Bit Score: 462.98  E-value: 7.79e-167
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974    3 KKCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDKNYELEHQISGTNKE 82
Cdd:TIGR01099   1 RKAVIPVAGLGTRFLPATKAIPKEMLPIVDKPLIQYIVEEAVEAGIEEIVFVTGRGKRAIEDHFDYSYELEHQLEKRGKE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   83 DLLINIRETIEAANFTYIRQREMKGLGHAILTGRELVGDEPFAVVLADDLCVNEqQGVLAQMVALYKQFRCSIVAVQEVP 162
Cdd:TIGR01099  81 ELLEEVRKISNLATIFYVRQKEQKGLGHAVLCARPFVGDEPFAVILGDDIVVNE-EPALKQMIKAYEKTGCSIIAVQEVP 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  163 ENETHKYGVISGEMIKDDLFRVDDMVEKPEPGTAPSNLAIIGRYILTPDIFELIEQTEPGKGGEIQITDALLKQAKAGCV 242
Cdd:TIGR01099 160 KEEVSKYGVIDGEGIEKDLYKVKNMVEKPKPEEAPSNLAIVGRYILTPDIFDLLEETPPGKGGEIQLTDAINKLLENETV 239
                         250       260
                  ....*....|....*....|.
gi 490873974  243 LAYKFKGQRFDCGSVEGYIEA 263
Cdd:TIGR01099 240 LAYKFNGKRYDCGSKLGYLEA 260
 
Name Accession Description Interval E-value
galU TIGR01099
UTP--glucose-1-phosphate uridylyltransferase; Built to distinquish between the highly similar ...
3-263 7.79e-167

UTP--glucose-1-phosphate uridylyltransferase; Built to distinquish between the highly similar genes galU and galF [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]


Pssm-ID: 273443 [Multi-domain]  Cd Length: 260  Bit Score: 462.98  E-value: 7.79e-167
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974    3 KKCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDKNYELEHQISGTNKE 82
Cdd:TIGR01099   1 RKAVIPVAGLGTRFLPATKAIPKEMLPIVDKPLIQYIVEEAVEAGIEEIVFVTGRGKRAIEDHFDYSYELEHQLEKRGKE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   83 DLLINIRETIEAANFTYIRQREMKGLGHAILTGRELVGDEPFAVVLADDLCVNEqQGVLAQMVALYKQFRCSIVAVQEVP 162
Cdd:TIGR01099  81 ELLEEVRKISNLATIFYVRQKEQKGLGHAVLCARPFVGDEPFAVILGDDIVVNE-EPALKQMIKAYEKTGCSIIAVQEVP 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  163 ENETHKYGVISGEMIKDDLFRVDDMVEKPEPGTAPSNLAIIGRYILTPDIFELIEQTEPGKGGEIQITDALLKQAKAGCV 242
Cdd:TIGR01099 160 KEEVSKYGVIDGEGIEKDLYKVKNMVEKPKPEEAPSNLAIVGRYILTPDIFDLLEETPPGKGGEIQLTDAINKLLENETV 239
                         250       260
                  ....*....|....*....|.
gi 490873974  243 LAYKFKGQRFDCGSVEGYIEA 263
Cdd:TIGR01099 240 LAYKFNGKRYDCGSKLGYLEA 260
GalU COG1210
UTP-glucose-1-phosphate uridylyltransferase [Cell wall/membrane/envelope biogenesis];
1-264 6.10e-165

UTP-glucose-1-phosphate uridylyltransferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440823 [Multi-domain]  Cd Length: 288  Bit Score: 459.11  E-value: 6.10e-165
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   1 MIKKCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDKNYELEHQISGTN 80
Cdd:COG1210    2 KIRKAVIPVAGLGTRFLPATKAIPKEMLPIVDKPLIQYVVEEAVAAGIEEIIFVTGRGKRAIEDHFDRSYELEATLEAKG 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  81 KEDLLINIRETIEAANFTYIRQREMKGLGHAILTGRELVGDEPFAVVLADDLCVNEqQGVLAQMVALYKQFRCSIVAVQE 160
Cdd:COG1210   82 KEELLEEVRSISPLANIHYVRQKEPLGLGHAVLCARPFVGDEPFAVLLGDDLIDSE-KPCLKQMIEVYEETGGSVIAVQE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 161 VPENETHKYGVISGEMIKDDLFRVDDMVEKPEPGTAPSNLAIIGRYILTPDIFELIEQTEPGKGGEIQITDALLKQAKAG 240
Cdd:COG1210  161 VPPEEVSKYGIVDGEEIEGGVYRVTGLVEKPAPEEAPSNLAIVGRYILTPEIFDILEKTKPGAGGEIQLTDAIAALAKEE 240
                        250       260
                 ....*....|....*....|....
gi 490873974 241 CVLAYKFKGQRFDCGSVEGYIEAT 264
Cdd:COG1210  241 PVYAYEFEGKRYDCGDKLGYLKAT 264
UGPase_prokaryotic cd02541
Prokaryotic UGPase catalyses the synthesis of UDP-glucose; Prokaryotic UDP-Glucose ...
3-264 3.25e-151

Prokaryotic UGPase catalyses the synthesis of UDP-glucose; Prokaryotic UDP-Glucose Pyrophosphorylase (UGPase) catalyzes a reversible production of UDP-Glucose and pyrophosphate (PPi) from glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids , glycoproteins , and proteoglycans. UGPase is found in both prokaryotes and eukaryotes, although prokaryotic and eukaryotic forms of UGPase catalyze the same reaction, they share low sequence similarity.


Pssm-ID: 133021 [Multi-domain]  Cd Length: 267  Bit Score: 423.48  E-value: 3.25e-151
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   3 KKCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDKNYELEHQISGTNKE 82
Cdd:cd02541    1 RKAVIPAAGLGTRFLPATKAIPKEMLPIVDKPVIQYIVEEAVAAGIEDIIIVTGRGKRAIEDHFDRSYELEETLEKKGKT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  83 DLLINIRETIEAANFTYIRQREMKGLGHAILTGRELVGDEPFAVVLADDLCVNeQQGVLAQMVALYKQFRCSIVAVQEVP 162
Cdd:cd02541   81 DLLEEVRIISDLANIHYVRQKEPLGLGHAVLCAKPFIGDEPFAVLLGDDLIDS-KEPCLKQLIEAYEKTGASVIAVEEVP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 163 ENETHKYGVISGEMIKDDLFRVDDMVEKPEPGTAPSNLAIIGRYILTPDIFELIEQTEPGKGGEIQITDALLKQAKAGCV 242
Cdd:cd02541  160 PEDVSKYGIVKGEKIDGDVFKVKGLVEKPKPEEAPSNLAIVGRYVLTPDIFDILENTKPGKGGEIQLTDAIAKLLEEEPV 239
                        250       260
                 ....*....|....*....|..
gi 490873974 243 LAYKFKGQRFDCGSVEGYIEAT 264
Cdd:cd02541  240 YAYVFEGKRYDCGNKLGYLKAT 261
PRK13389 PRK13389
UTP--glucose-1-phosphate uridylyltransferase GalU;
2-263 7.59e-64

UTP--glucose-1-phosphate uridylyltransferase GalU;


Pssm-ID: 184021 [Multi-domain]  Cd Length: 302  Bit Score: 202.83  E-value: 7.59e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   2 IKKCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDKNYELEHQISGTNK 81
Cdd:PRK13389   8 VKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVK 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  82 EDLLINIRETI-EAANFTYIRQREMKGLGHAILTGRELVGDEPFAVVLA----DDLCVNEQQGVLAQMVALYKQFRCSIV 156
Cdd:PRK13389  88 RQLLDEVQSICpPHVTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPdvilDEYESDLSQDNLAEMIRRFDETGHSQI 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 157 AVQevPENETHKYGVIS---GEMIKDDLFRVDDMVEKPEPGTAPSNLAIIGRYILTPDIFELIEQTEPGKGGEIQITDAL 233
Cdd:PRK13389 168 MVE--PVADVTAYGVVDckgVELAPGESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWPLLAKTPPGAGDEIQLTDAI 245
                        250       260       270
                 ....*....|....*....|....*....|
gi 490873974 234 LKQAKAGCVLAYKFKGQRFDCGSVEGYIEA 263
Cdd:PRK13389 246 DMLIEKETVEAYHMKGKSHDCGNKLGYMQA 275
NTP_transferase pfam00483
Nucleotidyl transferase; This family includes a wide range of enzymes which transfer ...
9-265 2.14e-30

Nucleotidyl transferase; This family includes a wide range of enzymes which transfer nucleotides onto phosphosugars.


Pssm-ID: 425709 [Multi-domain]  Cd Length: 243  Bit Score: 114.27  E-value: 2.14e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974    9 AAGYGTRFLPATKSMPKEMMPVVNK-PLIEYGVEEAIEAGM-DGMCIVTGRGKHSLMDHFDKNYELEHQIsgtnkedlli 86
Cdd:pfam00483   6 AGGSGTRLWPLTRTLAKPLVPVGGKyPLIDYPLSRLANAGIrEIIVILTQEHRFMLNELLGDGSKFGVQI---------- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   87 niretieaanfTYIRQREMKGLGHAILTGRELVGDEPF-AVVLADD-LCVNEqqgvLAQMVALYKQF-RCSIVAVQEVPE 163
Cdd:pfam00483  76 -----------TYALQPEGKGTAPAVALAADFLGDEKSdVLVLGGDhIYRMD----LEQAVKFHIEKaADATVTFGIVPV 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  164 NETHKYGVIsgemIKDDLFRVDDMVEKPEPGTApSNLAIIGRYILTPDIFELI-EQTEPGKGGEIQITDALLKQAKAGCV 242
Cdd:pfam00483 141 EPPTGYGVV----EFDDNGRVIRFVEKPKLPKA-SNYASMGIYIFNSGVLDFLaKYLEELKRGEDEITDILPKALEDGKL 215
                         250       260
                  ....*....|....*....|....*
gi 490873974  243 -LAYKFKGQR-FDCGSVEGYIEATN 265
Cdd:pfam00483 216 aYAFIFKGYAwLDVGTWDSLWEANL 240
 
Name Accession Description Interval E-value
galU TIGR01099
UTP--glucose-1-phosphate uridylyltransferase; Built to distinquish between the highly similar ...
3-263 7.79e-167

UTP--glucose-1-phosphate uridylyltransferase; Built to distinquish between the highly similar genes galU and galF [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]


Pssm-ID: 273443 [Multi-domain]  Cd Length: 260  Bit Score: 462.98  E-value: 7.79e-167
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974    3 KKCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDKNYELEHQISGTNKE 82
Cdd:TIGR01099   1 RKAVIPVAGLGTRFLPATKAIPKEMLPIVDKPLIQYIVEEAVEAGIEEIVFVTGRGKRAIEDHFDYSYELEHQLEKRGKE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   83 DLLINIRETIEAANFTYIRQREMKGLGHAILTGRELVGDEPFAVVLADDLCVNEqQGVLAQMVALYKQFRCSIVAVQEVP 162
Cdd:TIGR01099  81 ELLEEVRKISNLATIFYVRQKEQKGLGHAVLCARPFVGDEPFAVILGDDIVVNE-EPALKQMIKAYEKTGCSIIAVQEVP 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  163 ENETHKYGVISGEMIKDDLFRVDDMVEKPEPGTAPSNLAIIGRYILTPDIFELIEQTEPGKGGEIQITDALLKQAKAGCV 242
Cdd:TIGR01099 160 KEEVSKYGVIDGEGIEKDLYKVKNMVEKPKPEEAPSNLAIVGRYILTPDIFDLLEETPPGKGGEIQLTDAINKLLENETV 239
                         250       260
                  ....*....|....*....|.
gi 490873974  243 LAYKFKGQRFDCGSVEGYIEA 263
Cdd:TIGR01099 240 LAYKFNGKRYDCGSKLGYLEA 260
GalU COG1210
UTP-glucose-1-phosphate uridylyltransferase [Cell wall/membrane/envelope biogenesis];
1-264 6.10e-165

UTP-glucose-1-phosphate uridylyltransferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440823 [Multi-domain]  Cd Length: 288  Bit Score: 459.11  E-value: 6.10e-165
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   1 MIKKCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDKNYELEHQISGTN 80
Cdd:COG1210    2 KIRKAVIPVAGLGTRFLPATKAIPKEMLPIVDKPLIQYVVEEAVAAGIEEIIFVTGRGKRAIEDHFDRSYELEATLEAKG 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  81 KEDLLINIRETIEAANFTYIRQREMKGLGHAILTGRELVGDEPFAVVLADDLCVNEqQGVLAQMVALYKQFRCSIVAVQE 160
Cdd:COG1210   82 KEELLEEVRSISPLANIHYVRQKEPLGLGHAVLCARPFVGDEPFAVLLGDDLIDSE-KPCLKQMIEVYEETGGSVIAVQE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 161 VPENETHKYGVISGEMIKDDLFRVDDMVEKPEPGTAPSNLAIIGRYILTPDIFELIEQTEPGKGGEIQITDALLKQAKAG 240
Cdd:COG1210  161 VPPEEVSKYGIVDGEEIEGGVYRVTGLVEKPAPEEAPSNLAIVGRYILTPEIFDILEKTKPGAGGEIQLTDAIAALAKEE 240
                        250       260
                 ....*....|....*....|....
gi 490873974 241 CVLAYKFKGQRFDCGSVEGYIEAT 264
Cdd:COG1210  241 PVYAYEFEGKRYDCGDKLGYLKAT 264
UGPase_prokaryotic cd02541
Prokaryotic UGPase catalyses the synthesis of UDP-glucose; Prokaryotic UDP-Glucose ...
3-264 3.25e-151

Prokaryotic UGPase catalyses the synthesis of UDP-glucose; Prokaryotic UDP-Glucose Pyrophosphorylase (UGPase) catalyzes a reversible production of UDP-Glucose and pyrophosphate (PPi) from glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids , glycoproteins , and proteoglycans. UGPase is found in both prokaryotes and eukaryotes, although prokaryotic and eukaryotic forms of UGPase catalyze the same reaction, they share low sequence similarity.


Pssm-ID: 133021 [Multi-domain]  Cd Length: 267  Bit Score: 423.48  E-value: 3.25e-151
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   3 KKCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDKNYELEHQISGTNKE 82
Cdd:cd02541    1 RKAVIPAAGLGTRFLPATKAIPKEMLPIVDKPVIQYIVEEAVAAGIEDIIIVTGRGKRAIEDHFDRSYELEETLEKKGKT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  83 DLLINIRETIEAANFTYIRQREMKGLGHAILTGRELVGDEPFAVVLADDLCVNeQQGVLAQMVALYKQFRCSIVAVQEVP 162
Cdd:cd02541   81 DLLEEVRIISDLANIHYVRQKEPLGLGHAVLCAKPFIGDEPFAVLLGDDLIDS-KEPCLKQLIEAYEKTGASVIAVEEVP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 163 ENETHKYGVISGEMIKDDLFRVDDMVEKPEPGTAPSNLAIIGRYILTPDIFELIEQTEPGKGGEIQITDALLKQAKAGCV 242
Cdd:cd02541  160 PEDVSKYGIVKGEKIDGDVFKVKGLVEKPKPEEAPSNLAIVGRYVLTPDIFDILENTKPGKGGEIQLTDAIAKLLEEEPV 239
                        250       260
                 ....*....|....*....|..
gi 490873974 243 LAYKFKGQRFDCGSVEGYIEAT 264
Cdd:cd02541  240 YAYVFEGKRYDCGNKLGYLKAT 261
PRK13389 PRK13389
UTP--glucose-1-phosphate uridylyltransferase GalU;
2-263 7.59e-64

UTP--glucose-1-phosphate uridylyltransferase GalU;


Pssm-ID: 184021 [Multi-domain]  Cd Length: 302  Bit Score: 202.83  E-value: 7.59e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   2 IKKCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDKNYELEHQISGTNK 81
Cdd:PRK13389   8 VKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVK 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  82 EDLLINIRETI-EAANFTYIRQREMKGLGHAILTGRELVGDEPFAVVLA----DDLCVNEQQGVLAQMVALYKQFRCSIV 156
Cdd:PRK13389  88 RQLLDEVQSICpPHVTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPdvilDEYESDLSQDNLAEMIRRFDETGHSQI 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 157 AVQevPENETHKYGVIS---GEMIKDDLFRVDDMVEKPEPGTAPSNLAIIGRYILTPDIFELIEQTEPGKGGEIQITDAL 233
Cdd:PRK13389 168 MVE--PVADVTAYGVVDckgVELAPGESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWPLLAKTPPGAGDEIQLTDAI 245
                        250       260       270
                 ....*....|....*....|....*....|
gi 490873974 234 LKQAKAGCVLAYKFKGQRFDCGSVEGYIEA 263
Cdd:PRK13389 246 DMLIEKETVEAYHMKGKSHDCGNKLGYMQA 275
PRK10122 PRK10122
UTP--glucose-1-phosphate uridylyltransferase GalF;
1-271 2.33e-60

UTP--glucose-1-phosphate uridylyltransferase GalF;


Pssm-ID: 182252 [Multi-domain]  Cd Length: 297  Bit Score: 193.95  E-value: 2.33e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   1 MIK-KCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDKNYELEHQISGT 79
Cdd:PRK10122   1 MTNlKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEIVLVTHASKNAVENHFDTSYELESLLEQR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  80 NKEDLLINIRETI-EAANFTYIRQREMKGLGHAILTGRELVGDEPFAVVLA----DDLCVNEQQGVLAQMVALYKQFRCS 154
Cdd:PRK10122  81 VKRQLLAEVQSICpPGVTIMNVRQGQPLGLGHSILCARPAIGDNPFVVVLPdvviDDASADPLRYNLAAMIARFNETGRS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 155 IVAVQEVPeNETHKYGVISGEMIKD---DLFRVDDMVEKPE-PGTAPSNLAIIGRYILTPDIFELIEQTEPGKGGEIQIT 230
Cdd:PRK10122 161 QVLAKRMP-GDLSEYSVIQTKEPLDregKVSRIVEFIEKPDqPQTLDSDLMAVGRYVLSADIWPELERTEPGAWGRIQLT 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 490873974 231 DALLKQAKAGCVLAYKFKGQRFDCGSVEGYIEA-TNYCFENL 271
Cdd:PRK10122 240 DAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAfVKYGLRNL 281
NTP_transferase cd04181
NTP_transferases catalyze the transfer of nucleotides onto phosphosugars; ...
8-255 1.81e-55

NTP_transferases catalyze the transfer of nucleotides onto phosphosugars; Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.


Pssm-ID: 133024 [Multi-domain]  Cd Length: 217  Bit Score: 178.54  E-value: 1.81e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   8 PAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDKNYELEhqisgtnkedllin 87
Cdd:cd04181    4 LAAGKGTRLRPLTDTRPKPLLPIAGKPILEYIIERLARAGIDEIILVVGYLGEQIEEYFGDGSKFG-------------- 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  88 iretieaANFTYIRQREMKGLGHAILTGRELVGDEPFAVVLADDLCVNEqqgvLAQMVALYKQFRC-SIVAVQEVPENEt 166
Cdd:cd04181   70 -------VNIEYVVQEEPLGTAGAVRNAEDFLGDDDFLVVNGDVLTDLD----LSELLRFHREKGAdATIAVKEVEDPS- 137
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 167 hKYGVIsgemIKDDLFRVDDMVEKPEPGtaPSNLAIIGRYILTPDIFELIEQTEPgkGGEIQITDALLKQAKAGCVLAYK 246
Cdd:cd04181  138 -RYGVV----ELDDDGRVTRFVEKPTLP--ESNLANAGIYIFEPEILDYIPEILP--RGEDELTDAIPLLIEEGKVYGYP 208

                 ....*....
gi 490873974 247 FKGQRFDCG 255
Cdd:cd04181  209 VDGYWLDIG 217
G1P_TT_long cd04189
G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase; This family ...
3-263 4.64e-53

G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase; This family is the long form of Glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.The long from enzymes also have a left-handed parallel helix domain at the c-terminus, whereas, th eshort form enzymes do not have this domain. The homotetrameric, feedback inhibited short form is found in numerous bacterial species that produce dTDP-L-rhamnose.


Pssm-ID: 133032 [Multi-domain]  Cd Length: 236  Bit Score: 172.75  E-value: 4.64e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   3 KKCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDKNYELehqisgtnke 82
Cdd:cd04189    1 MKGLILAGGKGTRLRPLTYTRPKQLIPVAGKPIIQYAIEDLREAGIEDIGIVVGPTGEEIKEALGDGSRF---------- 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  83 dlliniretieAANFTYIRQREMKGLGHAILTGRELVGDEPFAVVLADDLCvneqQGVLAQMVALYKQFR--CSIVaVQE 160
Cdd:cd04189   71 -----------GVRITYILQEEPLGLAHAVLAARDFLGDEPFVVYLGDNLI----QEGISPLVRDFLEEDadASIL-LAE 134
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 161 VPenETHKYGVIsgeMIKDDlfRVDDMVEKPEpgTAPSNLAIIGRYILTPDIFELIEQTEPGKGGEIQITDALLKQAKAG 240
Cdd:cd04189  135 VE--DPRRFGVA---VVDDG--RIVRLVEKPK--EPPSNLALVGVYAFTPAIFDAISRLKPSWRGELEITDAIQWLIDRG 205
                        250       260
                 ....*....|....*....|....
gi 490873974 241 -CVLAYKFKGQRFDCGSVEGYIEA 263
Cdd:cd04189  206 rRVGYSIVTGWWKDTGTPEDLLEA 229
RmlA1 COG1209
dTDP-glucose pyrophosphorylase [Cell wall/membrane/envelope biogenesis];
8-266 1.39e-46

dTDP-glucose pyrophosphorylase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440822 [Multi-domain]  Cd Length: 294  Bit Score: 157.94  E-value: 1.39e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   8 PAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRgkhslmdhfdknyELEHQIsgtnkEDLLIN 87
Cdd:COG1209    6 LAGGSGTRLRPLTLTVSKQLLPVYDKPMIYYPLSTLMLAGIREILIISTP-------------EDGPQF-----ERLLGD 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  88 IRETieAANFTYIRQREMKGLGHAILTGRELVGDEPFAVVLADDLCvneQQGVLAQMVALYKQFRC-SIVAVQEV--PEN 164
Cdd:COG1209   68 GSQL--GIKISYAVQPEPLGLAHAFIIAEDFIGGDPVALVLGDNIF---YGDGLSELLREAAARESgATIFGYKVedPER 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 165 ethkYGVIsgEMikDDLFRVDDMVEKPEpgTAPSNLAIIGRYILTPDIFELIEQTEPGKGGEIQITDALLKQAKAGCvLA 244
Cdd:COG1209  143 ----YGVV--EF--DEDGRVVSLEEKPK--EPKSNLAVTGLYFYDNDVVEIAKNLKPSARGELEITDANQAYLERGK-LV 211
                        250       260
                 ....*....|....*....|....*
gi 490873974 245 YKFKGQRF---DCGSVEGYIEATNY 266
Cdd:COG1209  212 VELLGRGFawlDTGTHESLLEANRF 236
GCD1 COG1208
NDP-sugar pyrophosphorylase, includes eIF-2Bgamma, eIF-2Bepsilon, and LPS biosynthesis protein ...
4-263 5.12e-41

NDP-sugar pyrophosphorylase, includes eIF-2Bgamma, eIF-2Bepsilon, and LPS biosynthesis protein s [Translation, ribosomal structure and biogenesis, Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440821 [Multi-domain]  Cd Length: 238  Bit Score: 141.83  E-value: 5.12e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   4 KCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDKNYELEHQIsgtnked 83
Cdd:COG1208    1 KAVILAGGLGTRLRPLTDTRPKPLLPVGGKPLLEHILERLAAAGITEIVINVGYLAEQIEEYFGDGSRFGVRI------- 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  84 lliniretieaanfTYIRQREMKGLGHAILTGRELVGDEPFAVVLADDLC-VNeqqgvLAQMVALYKQFR--CSIVAvqe 160
Cdd:COG1208   74 --------------TYVDEGEPLGTGGALKRALPLLGDEPFLVLNGDILTdLD-----LAALLAFHREKGadATLAL--- 131
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 161 VPENETHKYGVIsgEMikDDLFRVDDMVEKPEpgTAPSNLAIIGRYILTPDIFELIEqtepgKGGEIQITDALLKQAKAG 240
Cdd:COG1208  132 VPVPDPSRYGVV--EL--DGDGRVTRFVEKPE--EPPSNLINAGIYVLEPEIFDYIP-----EGEPFDLEDLLPRLIAEG 200
                        250       260
                 ....*....|....*....|...
gi 490873974 241 CVLAYKFKGQRFDCGSVEGYIEA 263
Cdd:COG1208  201 RVYGYVHDGYWLDIGTPEDLLEA 223
rmlA_long TIGR01208
glucose-1-phosphate thymidylylransferase, long form; The family of known and putative ...
4-282 8.16e-40

glucose-1-phosphate thymidylylransferase, long form; The family of known and putative glucose-1-phosphate thymidyltransferase (also called dTDP-glucose synthase) shows a deep split into a short form (see TIGR01207) and a long form described by this model. The homotetrameric short form is found in numerous bacterial species that incorporate dTDP-L-rhamnose, which it helps synthesize, into the cell wall. It is subject to feedback inhibition. This form, in contrast, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced. Alternate name: dTDP-D-glucose synthase


Pssm-ID: 273500 [Multi-domain]  Cd Length: 353  Bit Score: 142.16  E-value: 8.16e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974    4 KCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGrgkhslmdhfdknYELEHQISGTNKED 83
Cdd:TIGR01208   1 KALILAAGKGTRLRPLTFTRPKQLIPVANKPILQYAIEDLAEAGITDIGIVVG-------------PVTGEEIKEIVGEG 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   84 llinireTIEAANFTYIRQREMKGLGHAILTGRELVGDEPFAVVLADDLCvneqQGVLAQMVALY--KQFRCSIvAVQEV 161
Cdd:TIGR01208  68 -------ERFGAKITYIVQGEPLGLAHAVYTARDFLGDDDFVVYLGDNLI----QDGISRFVKSFeeKDYDALI-LLTKV 135
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  162 PenETHKYGVISGEmikdDLFRVDDMVEKPEpgTAPSNLAIIGRYILTPDIFELIEQTEPGKGGEIQITDALLKQAKAG- 240
Cdd:TIGR01208 136 R--DPTAFGVAVLE----DGKRILKLVEKPK--EPPSNLAVVGLYMFRPLIFEAIKNIKPSWRGELEITDAIQWLIEKGy 207
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 490873974  241 CVLAYKFKGQRFDCGSVEGYIEAtNYCFENLYKKDQQQIELG 282
Cdd:TIGR01208 208 KVGGSKVTGWWKDTGKPEDLLDA-NRLILDEVEREVQGVDDE 248
NTP_transferase pfam00483
Nucleotidyl transferase; This family includes a wide range of enzymes which transfer ...
9-265 2.14e-30

Nucleotidyl transferase; This family includes a wide range of enzymes which transfer nucleotides onto phosphosugars.


Pssm-ID: 425709 [Multi-domain]  Cd Length: 243  Bit Score: 114.27  E-value: 2.14e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974    9 AAGYGTRFLPATKSMPKEMMPVVNK-PLIEYGVEEAIEAGM-DGMCIVTGRGKHSLMDHFDKNYELEHQIsgtnkedlli 86
Cdd:pfam00483   6 AGGSGTRLWPLTRTLAKPLVPVGGKyPLIDYPLSRLANAGIrEIIVILTQEHRFMLNELLGDGSKFGVQI---------- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   87 niretieaanfTYIRQREMKGLGHAILTGRELVGDEPF-AVVLADD-LCVNEqqgvLAQMVALYKQF-RCSIVAVQEVPE 163
Cdd:pfam00483  76 -----------TYALQPEGKGTAPAVALAADFLGDEKSdVLVLGGDhIYRMD----LEQAVKFHIEKaADATVTFGIVPV 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  164 NETHKYGVIsgemIKDDLFRVDDMVEKPEPGTApSNLAIIGRYILTPDIFELI-EQTEPGKGGEIQITDALLKQAKAGCV 242
Cdd:pfam00483 141 EPPTGYGVV----EFDDNGRVIRFVEKPKLPKA-SNYASMGIYIFNSGVLDFLaKYLEELKRGEDEITDILPKALEDGKL 215
                         250       260
                  ....*....|....*....|....*
gi 490873974  243 -LAYKFKGQR-FDCGSVEGYIEATN 265
Cdd:pfam00483 216 aYAFIFKGYAwLDVGTWDSLWEANL 240
G1P_TT_short cd02538
G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase; This family is ...
9-266 3.09e-27

G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase; This family is the short form of glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The homotetrameric, feedback inhibited short form is found in numerous bacterial species that produce dTDP-L-rhamnose. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.


Pssm-ID: 133019 [Multi-domain]  Cd Length: 240  Bit Score: 105.73  E-value: 3.09e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   9 AAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKhslMDHFDKnyelehqISGtNKEDLLINI 88
Cdd:cd02538    7 AGGSGTRLYPLTKVVSKQLLPVYDKPMIYYPLSTLMLAGIREILIISTPED---LPLFKE-------LLG-DGSDLGIRI 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  89 retieaanfTYIRQREMKGLGHAILTGRELVGDEPFAVVLADDLCvnEQQGVLAQMVALYKQFRCSIVAVQEVpeNETHK 168
Cdd:cd02538   76 ---------TYAVQPKPGGLAQAFIIGEEFIGDDPVCLILGDNIF--YGQGLSPILQRAAAQKEGATVFGYEV--NDPER 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 169 YGVIsgEMikDDLFRVDDMVEKPEpgTAPSNLAIIGRYILTPDIFELIEQTEPGKGGEIQITD---ALLKQAKagcvLAY 245
Cdd:cd02538  143 YGVV--EF--DENGRVLSIEEKPK--KPKSNYAVTGLYFYDNDVFEIAKQLKPSARGELEITDvnnEYLEKGK----LSV 212
                        250       260
                 ....*....|....*....|....
gi 490873974 246 KFKGQRF---DCGSVEGYIEATNY 266
Cdd:cd02538  213 ELLGRGFawlDTGTHESLLEASNF 236
NTP_transferase_WcbM_like cd06915
WcbM_like is a subfamily of nucleotidyl transferases; WcbM protein of Burkholderia mallei is ...
9-263 2.63e-14

WcbM_like is a subfamily of nucleotidyl transferases; WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.


Pssm-ID: 133065 [Multi-domain]  Cd Length: 223  Bit Score: 70.27  E-value: 2.63e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   9 AAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDKNYELEHQISgtnkedllini 88
Cdd:cd06915    5 AGGLGTRLRSVVKDLPKPLAPVAGRPFLEYLLEYLARQGISRIVLSVGYLAEQIEEYFGDGYRGGIRIY----------- 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  89 retieaanftYIRQREMKGLGHAILTGRELVGDEPFAVVLADDLC-VNeqqgvLAQMVALYKQFRCSIV-AVQEVPENEt 166
Cdd:cd06915   74 ----------YVIEPEPLGTGGAIKNALPKLPEDQFLVLNGDTYFdVD-----LLALLAALRASGADATmALRRVPDAS- 137
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 167 hKYGVIsgemIKDDLFRVDDMVEKPEpgTAPSNLAIIGRYILTPDIFELIEQTEPgkGGEiqiTDALLKQAKAGCVLAYK 246
Cdd:cd06915  138 -RYGNV----TVDGDGRVIAFVEKGP--GAAPGLINGGVYLLRKEILAEIPADAF--SLE---ADVLPALVKRGRLYGFE 205
                        250
                 ....*....|....*..
gi 490873974 247 FKGQRFDCGSVEGYIEA 263
Cdd:cd06915  206 VDGYFIDIGIPEDYARA 222
M1P_guanylylT_B_like_N cd06425
N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins; GDP-mannose ...
4-266 2.95e-14

N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins; GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain and a C-terminal Lefthanded-beta-Helix fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repression of GDP-mannose pyrophosphorylase in yeast leads to phenotypes, such as cell lysis, defective cell wall, and failure of polarized growth and cell separation.


Pssm-ID: 133047 [Multi-domain]  Cd Length: 233  Bit Score: 70.32  E-value: 2.95e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   4 KCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMcIVTGRGKHSLMDHFDKNYElehqisgtnkED 83
Cdd:cd06425    2 KALILVGGYGTRLRPLTLTVPKPLVEFCNKPMIEHQIEALAKAGVKEI-ILAVNYRPEDMVPFLKEYE----------KK 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  84 LLINIRETIEaanftyirqREMKGLGHAILTGRELVG--DEPFAVVLADDLCVNEqqgvLAQMVALYKQFRC--SIVaVQ 159
Cdd:cd06425   71 LGIKITFSIE---------TEPLGTAGPLALARDLLGddDEPFFVLNSDVICDFP----LAELLDFHKKHGAegTIL-VT 136
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 160 EVPENEthKYGVIsgeMIKDDLFRVDDMVEKPEPGTapSNLAIIGRYILTPDIFELIEQTEPGKGGEIqitdaLLKQAKA 239
Cdd:cd06425  137 KVEDPS--KYGVV---VHDENTGRIERFVEKPKVFV--GNKINAGIYILNPSVLDRIPLRPTSIEKEI-----FPKMASE 204
                        250       260
                 ....*....|....*....|....*..
gi 490873974 240 GCVLAYKFKGQRFDCGSVEGYIEATNY 266
Cdd:cd06425  205 GQLYAYELPGFWMDIGQPKDFLKGMSL 231
PRK15480 PRK15480
glucose-1-phosphate thymidylyltransferase RfbA; Provisional
3-266 1.75e-13

glucose-1-phosphate thymidylyltransferase RfbA; Provisional


Pssm-ID: 185377 [Multi-domain]  Cd Length: 292  Bit Score: 69.32  E-value: 1.75e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   3 KKCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGrgkhslmdhfDKNYELEHQISGTNKE 82
Cdd:PRK15480   4 RKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIIST----------PQDTPRFQQLLGDGSQ 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  83 DLLiniretieaaNFTYIRQREMKGLGHAILTGRELVGDEPFAVVLADDLCVNEQQGVLAQmVALYKQFRCSIVAVQEvp 162
Cdd:PRK15480  74 WGL----------NLQYKVQPSPDGLAQAFIIGEEFIGGDDCALVLGDNIFYGHDLPKLME-AAVNKESGATVFAYHV-- 140
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 163 eNETHKYGVISgemiKDDLFRVDDMVEKP-EPgtaPSNLAIIGRYILTPDIFELIEQTEPGKGGEIQITD---ALLKQAK 238
Cdd:PRK15480 141 -NDPERYGVVE----FDQNGTAISLEEKPlQP---KSNYAVTGLYFYDNDVVEMAKNLKPSARGELEITDinrIYMEQGR 212
                        250       260       270
                 ....*....|....*....|....*....|.
gi 490873974 239 agcvLAYKFKGQRF---DCGSVEGYIEATNY 266
Cdd:PRK15480 213 ----LSVAMMGRGYawlDTGTHQSLIEASNF 239
NTP_transferase_like_1 cd06422
NTP_transferase_like_1 is a member of the nucleotidyl transferase family; This is a subfamily ...
4-263 5.15e-12

NTP_transferase_like_1 is a member of the nucleotidyl transferase family; This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.


Pssm-ID: 133044 [Multi-domain]  Cd Length: 221  Bit Score: 63.74  E-value: 5.15e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   4 KCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMdgmcivtgrgkhslmdhfdknyelehqisgtnkED 83
Cdd:cd06422    1 KAMILAAGLGTRMRPLTDTRPKPLVPVAGKPLIDHALDRLAAAGI---------------------------------RR 47
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  84 LLINI---RETIEA------ANFTYIRQREMKGL---GHAILTGRELVGDEPFAVVLADDLCVNEQQGVLAQMVALYKQF 151
Cdd:cd06422   48 IVVNThhlADQIEAhlgdsrFGLRITISDEPDELletGGGIKKALPLLGDEPFLVVNGDILWDGDLAPLLLLHAWRMDAL 127
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 152 RCSIVAVQEVPENEthkYGVISgeMIKDDLFRvddmvekPEPGTAPSNLAIIGRYILTPDIFELIEQtepgkgGEIQITD 231
Cdd:cd06422  128 LLLLPLVRNPGHNG---VGDFS--LDADGRLR-------RGGGGAVAPFTFTGIQILSPELFAGIPP------GKFSLNP 189
                        250       260       270
                 ....*....|....*....|....*....|..
gi 490873974 232 ALLKQAKAGCVLAYKFKGQRFDCGSVEGYIEA 263
Cdd:cd06422  190 LWDRAIAAGRLFGLVYDGLWFDVGTPERLLAA 221
NTP_transferase_like_2 cd06426
NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family; This is a subfamily ...
9-240 3.76e-10

NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family; This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.


Pssm-ID: 133048 [Multi-domain]  Cd Length: 220  Bit Score: 58.68  E-value: 3.76e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   9 AAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDknyelehqisgtNKEDLLINI 88
Cdd:cd06426    5 AGGKGTRLRPLTENTPKPMLKVGGKPILETIIDRFIAQGFRNFYISVNYLAEMIEDYFG------------DGSKFGVNI 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  89 RetieaanftYIrqREMKGLGHA----ILTGRElvgDEPFaVVLADDLCVN----------EQQGVLAQMVALYKQFrcs 154
Cdd:cd06426   73 S---------YV--REDKPLGTAgalsLLPEKP---TDPF-LVMNGDILTNlnyehlldfhKENNADATVCVREYEV--- 134
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 155 ivavqEVPenethkYGVISGEmikDDlfRVDDMVEKPEpgtaPSNLAIIGRYILTPDIFELIEqtepgKGGEIQITDALL 234
Cdd:cd06426  135 -----QVP------YGVVETE---GG--RITSIEEKPT----HSFLVNAGIYVLEPEVLDLIP-----KNEFFDMPDLIE 189

                 ....*.
gi 490873974 235 KQAKAG 240
Cdd:cd06426  190 KLIKEG 195
PC_cytidylyltransferase cd02523
Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline; This family ...
5-74 1.49e-09

Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline; This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP-Cho to either lipoteichoic acid or lipopolysaccharide.


Pssm-ID: 133014 [Multi-domain]  Cd Length: 229  Bit Score: 56.86  E-value: 1.49e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   5 CLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDKNYELEH 74
Cdd:cd02523    1 AIILAAGRGSRLRPLTEDRPKCLLEINGKPLLERQIETLKEAGIDDIVIVTGYKKEQIEELLKKYPNIKF 70
COG1213 COG1213
Choline kinase [Lipid transport and metabolism];
4-70 2.13e-08

Choline kinase [Lipid transport and metabolism];


Pssm-ID: 440826 [Multi-domain]  Cd Length: 236  Bit Score: 53.71  E-value: 2.13e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490873974   4 KCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDKNY 70
Cdd:COG1213    1 KAVILAAGRGSRLGPLTDDIPKCLVEIGGKTLLERQLEALAAAGIKDIVVVTGYKAELIEEALARPG 67
GlmU COG1207
Bifunctional protein GlmU, N-acetylglucosamine-1-phosphate-uridyltransferase ...
9-122 6.71e-08

Bifunctional protein GlmU, N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440820 [Multi-domain]  Cd Length: 457  Bit Score: 53.11  E-value: 6.71e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   9 AAGYGTRFlpatKS-MPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKhslmdhfdknyELehqisgtnkedllin 87
Cdd:COG1207    9 AAGKGTRM----KSkLPKVLHPLAGKPMLEHVLDAARALGPDRIVVVVGHGA-----------EQ--------------- 58
                         90       100       110
                 ....*....|....*....|....*....|....*
gi 490873974  88 IRETIEAANFTYIRQREMKGLGHAILTGRELVGDE 122
Cdd:COG1207   59 VRAALADLDVEFVLQEEQLGTGHAVQQALPALPGD 93
eIF-2B_gamma_N_like cd02507
The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity; ...
9-44 1.62e-07

The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity; N-terminal domain of eEIF-2B epsilon and gamma, subunits of eukaryotic translation initiators, is a subfamily of glycosyltranferase 2 and is predicted to have glycosyltranferase activity. eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP, generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha, beta, gamma, delta and epsilon. Subunit epsilon shares sequence similarity with gamma subunit, and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase, suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast, eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.


Pssm-ID: 133001 [Multi-domain]  Cd Length: 216  Bit Score: 50.71  E-value: 1.62e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 490873974   9 AAGYGTRFLPATKSMPKEMMPVVNKPLIEY--------GVEEAI 44
Cdd:cd02507    7 ADGFGSRFLPLTSDIPKALLPVANVPLIDYtlewlekaGVEEVF 50
glmU PRK14358
bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate ...
9-247 3.35e-07

bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional


Pssm-ID: 237688 [Multi-domain]  Cd Length: 481  Bit Score: 51.13  E-value: 3.35e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   9 AAGYGTRFLPAtksMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHslmdhfdknyelehqisgtnkedlliNI 88
Cdd:PRK14358  14 AAGQGTRMKSA---LPKVLHPVAGRPMVAWAVKAARDLGARKIVVVTGHGAE--------------------------QV 64
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  89 RETIEAANFTYIRQREMKGLGHAILTGRELV--GDEPFAVVLADDLCVNEQqgVLAQMVALYKQFRCSI-VAVQEVPENE 165
Cdd:PRK14358  65 EAALQGSGVAFARQEQQLGTGDAFLSGASALteGDADILVLYGDTPLLRPD--TLRALVADHRAQGSAMtILTGELPDAT 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 166 THkygvisGEMIKDDLFRVDDMVEkpEPGTAPSNLAI----IGRYILTPDIFELIEQ-TEPGKGGEIQITDAL-LKQAKA 239
Cdd:PRK14358 143 GY------GRIVRGADGAVERIVE--QKDATDAEKAIgefnSGVYVFDARAPELARRiGNDNKAGEYYLTDLLgLYRAGG 214

                 ....*...
gi 490873974 240 GCVLAYKF 247
Cdd:PRK14358 215 AQVRAFKL 222
GT2_GlmU_N_bac cd02540
N-terminal domain of bacterial GlmU; The N-terminal domain of N-Acetylglucosamine-1-phosphate ...
9-121 1.71e-06

N-terminal domain of bacterial GlmU; The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.


Pssm-ID: 133020 [Multi-domain]  Cd Length: 229  Bit Score: 47.90  E-value: 1.71e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   9 AAGYGTRFlpatKS-MPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSlmdhfdknyelehqisgtnkedllin 87
Cdd:cd02540    5 AAGKGTRM----KSdLPKVLHPLAGKPMLEHVLDAARALGPDRIVVVVGHGAEQ-------------------------- 54
                         90       100       110
                 ....*....|....*....|....*....|....
gi 490873974  88 IRETIEAANFTYIRQREMKGLGHAILTGRELVGD 121
Cdd:cd02540   55 VKKALANPNVEFVLQEEQLGTGHAVKQALPALKD 88
eIF-2B_gamma_N cd04198
The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2; ...
9-55 3.79e-06

The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2; N-terminal domain of gamma subunit of the eukaryotic translation initiation factor 2B (eIF-2B): eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP, generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha, beta, gamma, delta and epsilon. Subunit gamma shares sequence similarity with epsilon subunit, and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase, suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast, eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.


Pssm-ID: 133041 [Multi-domain]  Cd Length: 214  Bit Score: 46.88  E-value: 3.79e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 490873974   9 AAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVT 55
Cdd:cd04198    7 AGGGGSRLYPLTDNIPKALLPVANKPMIWYPLDWLEKAGFEDVIVVV 53
M1P_guanylylT_A_like_N cd06428
N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose ...
13-219 5.95e-06

N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase; N-terminal domain of the M1P-guanylyltransferase A-isoform like proteins: The proteins of this family are likely to be a isoform of GDP-mannose pyrophosphorylase. Their sequences are highly conserved with mannose-1-phosphate guanyltransferase, but generally about 40-60 bases longer. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repression of GDP-mannose pyrophosphorylase in yeast leads to phenotypes including cell lysis, defective cell wall, and failure of polarized growth and cell separation.


Pssm-ID: 133050 [Multi-domain]  Cd Length: 257  Bit Score: 46.48  E-value: 5.95e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  13 GTRFLPATKSMPKEMMPVVNKPLIEYGVEEAieAGMDGMcivtgrgKHSLMDHFDKNYELEHQISGTnKEDLLINIReti 92
Cdd:cd06428   11 GTRFRPLSLDVPKPLFPVAGKPMIHHHIEAC--AKVPDL-------KEVLLIGFYPESVFSDFISDA-QQEFNVPIR--- 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  93 eaanftYIRqrEMKGLGHA---------ILTGRelvgdePFAV-VLADDLCVNEQqgvLAQMVALYKQFR--CSIVAVqE 160
Cdd:cd06428   78 ------YLQ--EYKPLGTAgglyhfrdqILAGN------PSAFfVLNADVCCDFP---LQELLEFHKKHGasGTILGT-E 139
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 161 VPENETHKYGVIsgemIKD-DLFRVDDMVEKPEpgTAPSNLAIIGRYILTPDIFELIEQT 219
Cdd:cd06428  140 ASREQASNYGCI----VEDpSTGEVLHYVEKPE--TFVSDLINCGVYLFSPEIFDTIKKA 193
MocA COG2068
CTP:molybdopterin cytidylyltransferase MocA [Coenzyme transport and metabolism];
9-157 3.99e-05

CTP:molybdopterin cytidylyltransferase MocA [Coenzyme transport and metabolism];


Pssm-ID: 441671 [Multi-domain]  Cd Length: 195  Bit Score: 43.61  E-value: 3.99e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   9 AAGYGTRFlpatkSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHslmdhfdknyELEHQISGTnkedlliNI 88
Cdd:COG2068   10 AAGASSRM-----GRPKLLLPLGGKPLLERAVEAALAAGLDPVVVVLGADAE----------EVAAALAGL-------GV 67
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 490873974  89 ReTIEAANFTyirqremKGLGHAILTG-RELVGD-EPFAVVLADDLCVNEQqgVLAQMVALYKQFRCSIVA 157
Cdd:COG2068   68 R-VVVNPDWE-------EGMSSSLRAGlAALPADaDAVLVLLGDQPLVTAE--TLRRLLAAFRESPASIVA 128
glgC PRK05293
glucose-1-phosphate adenylyltransferase; Provisional
156-263 6.87e-05

glucose-1-phosphate adenylyltransferase; Provisional


Pssm-ID: 179997 [Multi-domain]  Cd Length: 380  Bit Score: 43.70  E-value: 6.87e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 156 VAVQEVPENETHKYGVisgeMIKDDLFRVDDMVEKPEpgTAPSNLAIIGRYILTPDIFE--LIE-QTEP------GKgge 226
Cdd:PRK05293 149 IAVIEVPWEEASRFGI----MNTDENMRIVEFEEKPK--NPKSNLASMGIYIFNWKRLKeyLIEdEKNPnsshdfGK--- 219
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 490873974 227 iQITDALLKQAKAgcVLAYKFKGQRFDCGSVEGYIEA 263
Cdd:PRK05293 220 -NVIPLYLEEGEK--LYAYPFKGYWKDVGTIESLWEA 253
glmU PRK14355
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate ...
9-190 1.27e-04

bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;


Pssm-ID: 237685 [Multi-domain]  Cd Length: 459  Bit Score: 43.19  E-value: 1.27e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   9 AAGYGTRFlpatKS-MPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDknyelehqisgtnkedllin 87
Cdd:PRK14355  10 AAGKGTRM----KSdLVKVMHPLAGRPMVSWPVAAAREAGAGRIVLVVGHQAEKVREHFA-------------------- 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  88 iretiEAANFTYIRQREMKGLGHAILTGR-ELVGDEPFAVVLADDLCVNEQQgVLAQMVALYKQFRCSIVAVQEVPENeT 166
Cdd:PRK14355  66 -----GDGDVSFALQEEQLGTGHAVACAApALDGFSGTVLILCGDVPLLRAE-TLQGMLAAHRATGAAVTVLTARLEN-P 138
                        170       180
                 ....*....|....*....|....
gi 490873974 167 HKYGVIsgemIKDDLFRVDDMVEK 190
Cdd:PRK14355 139 FGYGRI----VRDADGRVLRIVEE 158
G1P_cytidylyltransferase cd02524
G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose; ...
9-249 2.24e-04

G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose; Alpha-D-Glucose-1-phosphate Cytidylyltransferase catalyzes the production of CDP-D-Glucose from alpha-D-Glucose-1-phosphate and MgCTP as substrate. CDP-D-Glucose is the precursor for synthesizing four of the five naturally occurring 3,6-dideoxy sugars-abequose (3,6-dideoxy-D-Xylo-hexose), ascarylose (3,6-dideoxy-L-arabino-hexose), paratose (3,6-dideoxy-D-ribohexose), and tyvelose (3,6-dideoxy-D-arabino-hexose. Deoxysugars are ubiquitous in nature where they function in a variety of biological processes, including cell adhesion, immune response, determination of ABO blood groups, fertilization, antibiotic function, and microbial pathogenicity.


Pssm-ID: 133015 [Multi-domain]  Cd Length: 253  Bit Score: 41.79  E-value: 2.24e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   9 AAGYGTRFLPATKSMPKEMMPVVNKPLI--------EYGVEEAIeagmdgmcIVTGRGKHSLMDHFdKNYELEH------ 74
Cdd:cd02524    5 AGGLGTRLSEETELKPKPMVEIGGRPILwhimkiysHYGHNDFI--------LCLGYKGHVIKEYF-LNYFLHNsdvtid 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974  75 ------QISGTNKEDLLINIRETieaanftyirqremkglGHAILTG------RELVGD-EPFAVVLADDLC-VN----- 135
Cdd:cd02524   76 lgtnriELHNSDIEDWKVTLVDT-----------------GLNTMTGgrlkrvRRYLGDdETFMLTYGDGVSdVNinali 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974 136 ---EQQGVLAQMVALYKQFRcsivavqevpenethkygviSGEMIKDDLFRVDDMVEKPEpgtapSNLAII--GRYILTP 210
Cdd:cd02524  139 efhRSHGKLATVTAVHPPGR--------------------FGELDLDDDGQVTSFTEKPQ-----GDGGWIngGFFVLEP 193
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 490873974 211 DIFELIEqtepgKGGEIQITDALLKQAKAGCVLAYKFKG 249
Cdd:cd02524  194 EVFDYID-----GDDTVFEREPLERLAKDGELMAYKHTG 227
eIF-2B_epsilon_N cd04197
The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2; ...
9-68 3.53e-04

The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2; N-terminal domain of epsilon subunit of the eukaryotic translation initiation factor 2B (eIF-2B): eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP, generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha, beta, gamma, delta and epsilon. Subunit epsilon shares sequence similarity with gamma subunit, and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase, suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast, eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.


Pssm-ID: 133040 [Multi-domain]  Cd Length: 217  Bit Score: 41.05  E-value: 3.53e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 490873974   9 AAGYGTRFLPATKSMPKEMMPVVNKPLIEY--------GVEEAIeagmdgmcIVTGRGKHSLMDHFDK 68
Cdd:cd04197    7 ADSFNRRFRPLTKEKPRCLLPLANVPLIDYtleflalnGVEEVF--------VFCCSHSDQIKEYIEK 66
glmU PRK14357
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate ...
4-124 1.46e-03

bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;


Pssm-ID: 237687 [Multi-domain]  Cd Length: 448  Bit Score: 39.75  E-value: 1.46e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   4 KCLFPAAGYGTRFlpatKS-MPKEMMPVVNKPLIEYGVEEAIEAGmDGMCIVTGRGKHSLMDHFDKNYELEHqisgtnke 82
Cdd:PRK14357   2 RALVLAAGKGTRM----KSkIPKVLHKISGKPMINWVIDTAKKVA-QKVGVVLGHEAELVKKLLPEWVKIFL-------- 68
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 490873974  83 dlliniretieaanftyirQREMKGLGHAILTGRE----------LVGDEPF 124
Cdd:PRK14357  69 -------------------QEEQLGTAHAVMCARDfiepgddlliLYGDVPL 101
GT_2_like_f cd04182
GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function; ...
9-157 5.55e-03

GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133025 [Multi-domain]  Cd Length: 186  Bit Score: 37.15  E-value: 5.55e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490873974   9 AAGYGTRFlpatkSMPKEMMPVVNKPLIEYGVEEAIEAGMDGMCIVTGRGKHSLMDHFDknyELEHQIsgtnkedlLINi 88
Cdd:cd04182    7 AAGRSSRM-----GGNKLLLPLDGKPLLRHALDAALAAGLSRVIVVLGAEADAVRAALA---GLPVVV--------VIN- 69
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 490873974  89 retiEAANftyirqremKGLGHAILTGRELVGDEPFAVV--LADDLCVNEqqGVLAQMVALYKQFRCSIVA 157
Cdd:cd04182   70 ----PDWE---------EGMSSSLAAGLEALPADADAVLilLADQPLVTA--ETLRALIDAFREDGAGIVA 125
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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