MULTISPECIES: Lrp/AsnC ligand binding domain-containing protein [Haloarcula]
Lrp/AsnC ligand binding domain-containing protein( domain architecture ID 10470669)
Lrp/AsnC ligand binding domain-containing protein similar to Thermus thermophilus SraA; the Lrp/AsnC ligand binding domain is usually found at C-terminal end of L-leucine-responsive regulatory protein (Lrp/AsnC) family
List of domain hits
Name | Accession | Description | Interval | E-value | ||
Lrp super family | cl34293 | DNA-binding transcriptional regulator, Lrp family [Transcription]; |
2-75 | 3.57e-10 | ||
DNA-binding transcriptional regulator, Lrp family [Transcription]; The actual alignment was detected with superfamily member COG1522: Pssm-ID: 441131 [Multi-domain] Cd Length: 138 Bit Score: 52.09 E-value: 3.57e-10
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Name | Accession | Description | Interval | E-value | ||
Lrp | COG1522 | DNA-binding transcriptional regulator, Lrp family [Transcription]; |
2-75 | 3.57e-10 | ||
DNA-binding transcriptional regulator, Lrp family [Transcription]; Pssm-ID: 441131 [Multi-domain] Cd Length: 138 Bit Score: 52.09 E-value: 3.57e-10
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AsnC_trans_reg | pfam01037 | Lrp/AsnC ligand binding domain; The l-leucine-responsive regulatory protein (Lrp/AsnC) family ... |
6-76 | 1.85e-07 | ||
Lrp/AsnC ligand binding domain; The l-leucine-responsive regulatory protein (Lrp/AsnC) family is a family of similar bacterial transcription regulatory proteins. The family is named after two E. coli proteins involved in regulating amino acid metabolism. This entry corresponds to the usually C-terminal regulatory ligand binding domain. Structurally this domain has a dimeric alpha/beta barrel fold. This domain binds almost exclusively amino acids but also 4-hydroxyphenylpyruvate and kynurenine (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043). Pssm-ID: 426007 Cd Length: 73 Bit Score: 43.67 E-value: 1.85e-07
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HTH_ASNC | smart00344 | helix_turn_helix ASNC type; AsnC: an autogenously regulated activator of asparagine synthetase ... |
2-41 | 1.42e-03 | ||
helix_turn_helix ASNC type; AsnC: an autogenously regulated activator of asparagine synthetase A transcription in Escherichia coli) Pssm-ID: 214628 [Multi-domain] Cd Length: 108 Bit Score: 34.03 E-value: 1.42e-03
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PRK11169 | PRK11169 | leucine-responsive transcriptional regulator Lrp; |
7-76 | 3.24e-03 | ||
leucine-responsive transcriptional regulator Lrp; Pssm-ID: 183009 [Multi-domain] Cd Length: 164 Bit Score: 33.97 E-value: 3.24e-03
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Name | Accession | Description | Interval | E-value | ||
Lrp | COG1522 | DNA-binding transcriptional regulator, Lrp family [Transcription]; |
2-75 | 3.57e-10 | ||
DNA-binding transcriptional regulator, Lrp family [Transcription]; Pssm-ID: 441131 [Multi-domain] Cd Length: 138 Bit Score: 52.09 E-value: 3.57e-10
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AsnC_trans_reg | pfam01037 | Lrp/AsnC ligand binding domain; The l-leucine-responsive regulatory protein (Lrp/AsnC) family ... |
6-76 | 1.85e-07 | ||
Lrp/AsnC ligand binding domain; The l-leucine-responsive regulatory protein (Lrp/AsnC) family is a family of similar bacterial transcription regulatory proteins. The family is named after two E. coli proteins involved in regulating amino acid metabolism. This entry corresponds to the usually C-terminal regulatory ligand binding domain. Structurally this domain has a dimeric alpha/beta barrel fold. This domain binds almost exclusively amino acids but also 4-hydroxyphenylpyruvate and kynurenine (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043). Pssm-ID: 426007 Cd Length: 73 Bit Score: 43.67 E-value: 1.85e-07
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HTH_ASNC | smart00344 | helix_turn_helix ASNC type; AsnC: an autogenously regulated activator of asparagine synthetase ... |
2-41 | 1.42e-03 | ||
helix_turn_helix ASNC type; AsnC: an autogenously regulated activator of asparagine synthetase A transcription in Escherichia coli) Pssm-ID: 214628 [Multi-domain] Cd Length: 108 Bit Score: 34.03 E-value: 1.42e-03
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PRK11169 | PRK11169 | leucine-responsive transcriptional regulator Lrp; |
7-76 | 3.24e-03 | ||
leucine-responsive transcriptional regulator Lrp; Pssm-ID: 183009 [Multi-domain] Cd Length: 164 Bit Score: 33.97 E-value: 3.24e-03
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Blast search parameters | ||||
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