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MULTISPECIES: BCCT family transporter [Acinetobacter]
Protein Classification
BCCT family transporter ( domain architecture ID 10003438 )
BCCT (betaine-carnitine-choline transporter) family transporter shares the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]; energized by pmf-driven proton symport; similar to Bacillus subtilis glycine betaine transporter OpuD
List of domain hits
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
9-532
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 525.09
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 9 K GLN P T V T I A S K LL LFI F IAFCIFKEKQ AG EYFQLISNVLLQ N AK W YL LLL ATSLL VF L LYL CM S RF G Q I K LG K D NE KPE 88
Cdd:COG1292 11 K KID P P V F I P S A LL ILA F VLWGLLFPEA AG AVLNAAFSWITT N FG W FY LLL VLLFV VF C LYL AF S KY G K I R LG G D DA KPE 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 89 Y S NLA W IC MLFS C GMGIGL M FW S VAEP IS H YA S N P F - TPGL S D E S AR M AM QL TFFHWGLH P W GLFC LV AV AL G YF S YR KD 167
Cdd:COG1292 91 F S TFS W FA MLFS A GMGIGL V FW G VAEP LY H FL S P P P g VEPG S P E A AR W AM AY TFFHWGLH A W AIYA LV GL AL A YF A YR RG 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 168 LP FAMR S I LYPL I G KK IYGPIG DIV D T L TIVI T A FG ISQ SL SM G I L EL N T GLN HT FGI NMDVKI Q L I LVL V LC AL A TIS L 247
Cdd:COG1292 171 LP LTIS S A LYPL L G DR IYGPIG KVI D I L AVFA T V FG VAT SL GL G A L QI N A GLN YL FGI PNSLTV Q I I IIA V IT AL F TIS A 250
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 248 L S AIS KG F K FIAEG NMVL SY LL VFIIIFI G S T HY ILN T F FEGI GDYLQN I V G MSLW S DA QK D S GW QNS WT AY YW P WW MT W 327
Cdd:COG1292 251 V S GLD KG I K RLSNL NMVL AL LL LLFVLIV G P T LF ILN L F VQSL GDYLQN F V P MSLW T DA YG D T GW LGG WT VF YW A WW IA W 330
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 328 APFVGLFIARIS K GRTIR QVI LG S L AA PTL L TFLW IAA FGG A A LKI E KS thqpttssivtntattvsvdkvpa HELTIT E 407
Cdd:COG1292 331 APFVGLFIARIS R GRTIR EFV LG V L LV PTL F TFLW FSV FGG T A IHL E LN ------------------------ GGGDLA E 386
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 408 A TKQDPAR A V F VFFDH L TPSS dtki ILS A L LCL L LA I HVI T LVN SG I LVL CF L D S Y G ATD P SIGI R LI W SII I P L IGGG L 487
Cdd:COG1292 387 A VAAGVEA A L F ALLEQ L PLGT ---- ILS V L AII L VI I FFV T SAD SG S LVL AM L T S G G DEE P PRWQ R IF W GVL I G L VAAV L 462
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 491426283 488 LLAGGL T A IK TA C II AGF P I S IL L GI MC F SL MRS LREDP KVQERE 532
Cdd:COG1292 463 LLAGGL S A LQ TA S II TAL P F S FV L LL MC V SL VKA LREDP RRLRSA 507
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
9-532
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 525.09
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 9 K GLN P T V T I A S K LL LFI F IAFCIFKEKQ AG EYFQLISNVLLQ N AK W YL LLL ATSLL VF L LYL CM S RF G Q I K LG K D NE KPE 88
Cdd:COG1292 11 K KID P P V F I P S A LL ILA F VLWGLLFPEA AG AVLNAAFSWITT N FG W FY LLL VLLFV VF C LYL AF S KY G K I R LG G D DA KPE 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 89 Y S NLA W IC MLFS C GMGIGL M FW S VAEP IS H YA S N P F - TPGL S D E S AR M AM QL TFFHWGLH P W GLFC LV AV AL G YF S YR KD 167
Cdd:COG1292 91 F S TFS W FA MLFS A GMGIGL V FW G VAEP LY H FL S P P P g VEPG S P E A AR W AM AY TFFHWGLH A W AIYA LV GL AL A YF A YR RG 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 168 LP FAMR S I LYPL I G KK IYGPIG DIV D T L TIVI T A FG ISQ SL SM G I L EL N T GLN HT FGI NMDVKI Q L I LVL V LC AL A TIS L 247
Cdd:COG1292 171 LP LTIS S A LYPL L G DR IYGPIG KVI D I L AVFA T V FG VAT SL GL G A L QI N A GLN YL FGI PNSLTV Q I I IIA V IT AL F TIS A 250
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 248 L S AIS KG F K FIAEG NMVL SY LL VFIIIFI G S T HY ILN T F FEGI GDYLQN I V G MSLW S DA QK D S GW QNS WT AY YW P WW MT W 327
Cdd:COG1292 251 V S GLD KG I K RLSNL NMVL AL LL LLFVLIV G P T LF ILN L F VQSL GDYLQN F V P MSLW T DA YG D T GW LGG WT VF YW A WW IA W 330
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 328 APFVGLFIARIS K GRTIR QVI LG S L AA PTL L TFLW IAA FGG A A LKI E KS thqpttssivtntattvsvdkvpa HELTIT E 407
Cdd:COG1292 331 APFVGLFIARIS R GRTIR EFV LG V L LV PTL F TFLW FSV FGG T A IHL E LN ------------------------ GGGDLA E 386
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 408 A TKQDPAR A V F VFFDH L TPSS dtki ILS A L LCL L LA I HVI T LVN SG I LVL CF L D S Y G ATD P SIGI R LI W SII I P L IGGG L 487
Cdd:COG1292 387 A VAAGVEA A L F ALLEQ L PLGT ---- ILS V L AII L VI I FFV T SAD SG S LVL AM L T S G G DEE P PRWQ R IF W GVL I G L VAAV L 462
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 491426283 488 LLAGGL T A IK TA C II AGF P I S IL L GI MC F SL MRS LREDP KVQERE 532
Cdd:COG1292 463 LLAGGL S A LQ TA S II TAL P F S FV L LL MC V SL VKA LREDP RRLRSA 507
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
15-525
8.83e-170
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 490.13
E-value: 8.83e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 15 V TIA S KL L LFI F IAFCIFKEKQAGEYFQLISNVLLQ N AK W YL LLL ATSL LVF L L Y L CM SR F G Q I K LG K D NE KPE Y S NLA W 94
Cdd:pfam02028 1 V FAV S AG L ILA F VLLGLIFPEALSAVVNTALDWITD N FG W FY LLL VLIF LVF A L F L AF SR Y G N I R LG G D DD KPE F S TFS W 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 95 IC MLF SC GMGIGL M FW S VAEP I SHY A S N P FT - PGLSD E S A RM AM QL TFFHWGLH P W GLFC LVA V AL G YF S YRK D LP FAMR 173
Cdd:pfam02028 81 FA MLF AA GMGIGL V FW G VAEP L SHY L S P P PG g EPGTP E A A QQ AM AY TFFHWGLH A W AIYA LVA L AL A YF A YRK G LP LLIS 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 174 S I LYPL I G KK I Y GPIG DIV D T L T I VI T A FG ISQ SL SM G I L EL N T GL NHT FGI NMDVKI QL ILVLVLC AL A TIS LL S AIS K 253
Cdd:pfam02028 161 S A LYPL L G DR I D GPIG KAI D I L A I IA T V FG VAT SL GL G A L QI N A GL SYL FGI PNTLTT QL AIIAIIT AL F TIS AV S GLD K 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 254 G F K FIAEG NM V L SYL L VFIIIFI G S T HY ILNTF FEGI GDYLQN I V G MS LWS D A - QKDS GW QNS WT AY YW P WW MT WAPFVG 332
Cdd:pfam02028 241 G I K RLSNL NM Y L AVA L LLFVLIA G P T LF ILNTF VQSL GDYLQN F V P MS FYT D P f GDTG GW LGG WT IF YW A WW IA WAPFVG 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 333 L FIARIS K GRTIR QV ILG S L AA PTL L TFLW IAA FGG A A LKI E KS thqpttssivtntattvsvdkvpa HELTITE A TKQD 412
Cdd:pfam02028 321 M FIARIS R GRTIR EF ILG V L LV PTL F TFLW FSV FGG T A IYL E LN ------------------------ GPGDLAD A VEAG 376
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 413 P AR A V F VFFDH L TPSS dtki ILS A L LC LL LA I HVI T LVN SG I LV LCF L D S Y G ATD P SIGI R LI W SIIIPLIGGG LLLAGG 492
Cdd:pfam02028 377 P PA A L F ALLEQ L PLGT ---- ILS V L AL LL II I FFV T SAD SG T LV IAM L S S G G DLN P PRWQ R VF W GVLLGAVAAV LLLAGG 452
490 500 510
....*....|....*....|....*....|...
gi 491426283 493 L T A IKT A C IIA GF P I S IL L GI MC F SL MRS LRE D 525
Cdd:pfam02028 453 L E A LQS A S IIA AL P F S FI L LL MC I SL FKA LRE E 485
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
54-525
2.41e-124
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 372.84
E-value: 2.41e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 54 W YLL L LA T SL L V F L LY LCM SR F G Q I K LG K D N EKPE Y S N L A W IC MLF SC GMG I GLMFW S VAEP ISH Y ASN PF TP G LSDES A 133
Cdd:TIGR00842 2 W AYI L TV T LF L G F V LY IAF SR Y G K I R LG R D D EKPE F S T L S W LA MLF AA GMG A GLMFW G VAEP LTY Y LTP PF GA G PTSTT A 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 134 - RM A MQL T F FHWG L HPW GLFC LV AV AL G YF SY RK D LP FAMR S I L Y PL I G K K IY GPIG DIV D T L TI V I T A FG ISQ SL SM G I 212
Cdd:TIGR00842 82 q EQ A LAY T L FHWG I HPW AIYA LV GL AL A YF HF RK G LP LRLS S A L V PL L G E K VN GPIG KAI D I L AL V A T V FG VAT SL GL G A 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 213 LEL N T GL NHT FGI NMDVKI Q LILV L VLC ALA T IS LL S AIS KG F K FIAEG NM V L SY LL VFIIIFI G S T HYI LN T F FEG IG D 292
Cdd:TIGR00842 162 PQI N A GL SAL FGI PDSFWL Q ALII L CVT ALA C IS VA S GVG KG I K ILSNI NM A L AF LL LLFVLIV G P T VFL LN S F VDS IG N 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 293 YLQN IVG MS LWS D A - QKDS GW QNS WT AY YW P WW MT W A PFVG L FIARIS K GRTIR QV I L G S L AA PT LL T F LW IAA FG GA AL 371
Cdd:TIGR00842 242 YLQN FPQ MS FRT D P d DGKG GW PGG WT VF YW A WW IS W S PFVG M FIARIS R GRTIR EF I F G V L LG PT AF T W LW FSV FG NS AL 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 372 KIE ksthqpttssiv T N TAT tvsvdkvpahe LTITEATKQDP ARA V F VFFDH L TPSSD T kiil S AL LCL L LA I HV IT LVN 451
Cdd:TIGR00842 322 LLQ ------------ Q N GGF ----------- INGPFVVETNG ARA L F GLLAA L PLGTI T ---- M AL ALI L II I FF IT SAD 374
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 491426283 452 S GI LVL CFLD S Y G A --- TD P SIGI R LI W SII I P LI GGG LL LA - G G L T A IK T AC IIA GF P I S ILLGIMC FSL MRS L RE D 525
Cdd:TIGR00842 375 S AS LVL ANTT S R G G qlg EE P PKWV R VF W AVA I G LI ALV LL FS g G S L A A LQ T TT IIA AL P F S FVMLVVM FSL IKD L KQ D 452
PRK09928
PRK09928 choline transport protein BetT; Provisional
11-525
6.22e-124
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 379.43
E-value: 6.22e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 11 L NP T V TIA S KL L LFI F IAFC I FKEKQAGEYFQLIS N VLLQNAK WY L LL L AT SLL VF LLYLCM SRFG Q IKLG KDNE KPE Y S 90
Cdd:PRK09928 15 I NP V V FYT S AG L ILL F SLTT I LFTDFSNRWINRTL N WVSKTFG WY Y LL A AT LYI VF VIFIAC SRFG S IKLG PEQS KPE F S 94
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 91 N L A W IC MLF SC G M GI G LMF W SVAEP ISH Y ASN P FTP G LSD E S AR M AM QL T F FH W GL HP W GLFC L VAV ALGYFSYR KD LP F 170
Cdd:PRK09928 95 L L S W AA MLF AA G I GI D LMF F SVAEP VTQ Y MQP P EGA G QTI E A AR Q AM VW T L FH Y GL TG W SMYA L MGM ALGYFSYR YN LP L 174
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 171 AM RS I LYP LI GK K I Y GPIG DI VD TLTIVI T A FGI SQS L SM G ILE LN T GL NHT F G I NMDVKI Q LI L VLVLCAL ATIS LL S A 250
Cdd:PRK09928 175 TI RS A LYP IF GK R I N GPIG HS VD IAAVIG T I FGI ATT L GI G VVQ LN Y GL SVL F D I PESLAA Q AA L IALSVII ATIS VT S G 254
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 251 IS KG FKFIA E G N MV L SYL L VFIII F I G S T HYI LN TFFEGI GDY LQNIV GM S L W S D A - QKDSG W Q N S WT AYY W P WW MT W A P 329
Cdd:PRK09928 255 VN KG IRVLS E L N VL L ALG L ILFVL F M G D T SFL LN ALVLNV GDY VNRFM GM T L N S F A f DRPTE W M N N WT LFF W A WW VA W S P 334
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 330 FVGLF I ARIS K GRTIRQ VI LG S L AA P TLL T F LW IAA FG GA AL kieksthqpttssivtntattvsv DKVPAHELTIT E AT 409
Cdd:PRK09928 335 FVGLF L ARIS R GRTIRQ FV LG T L II P FTF T L LW LSI FG NS AL ------------------------ YEIIHGNAAFA E EA 390
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 410 KQD P A R AVFVFFDH ----- LTP S SD T kiilsallc LLLAIHVI T LVN SG I LVL CFLD S YGA --- T D PSIGI R LI WS II I P 481
Cdd:PRK09928 391 MAH P E R GFYSLLAQ ypaft FSA S VA T --------- ITGLLFYV T SAD SG A LVL GNFT S KLK din S D APNWL R VF WS VA I G 461
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 491426283 482 L IGG G L L LAG G LT A IKTACI I A G F P I S ILLGIMCFS L MR SL R - ED 525
Cdd:PRK09928 462 L LTL G M L MTN G IS A LQNTTV I M G L P F S FVIFFVMAG L YK SL K v ED 506
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
9-532
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 525.09
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 9 K GLN P T V T I A S K LL LFI F IAFCIFKEKQ AG EYFQLISNVLLQ N AK W YL LLL ATSLL VF L LYL CM S RF G Q I K LG K D NE KPE 88
Cdd:COG1292 11 K KID P P V F I P S A LL ILA F VLWGLLFPEA AG AVLNAAFSWITT N FG W FY LLL VLLFV VF C LYL AF S KY G K I R LG G D DA KPE 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 89 Y S NLA W IC MLFS C GMGIGL M FW S VAEP IS H YA S N P F - TPGL S D E S AR M AM QL TFFHWGLH P W GLFC LV AV AL G YF S YR KD 167
Cdd:COG1292 91 F S TFS W FA MLFS A GMGIGL V FW G VAEP LY H FL S P P P g VEPG S P E A AR W AM AY TFFHWGLH A W AIYA LV GL AL A YF A YR RG 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 168 LP FAMR S I LYPL I G KK IYGPIG DIV D T L TIVI T A FG ISQ SL SM G I L EL N T GLN HT FGI NMDVKI Q L I LVL V LC AL A TIS L 247
Cdd:COG1292 171 LP LTIS S A LYPL L G DR IYGPIG KVI D I L AVFA T V FG VAT SL GL G A L QI N A GLN YL FGI PNSLTV Q I I IIA V IT AL F TIS A 250
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 248 L S AIS KG F K FIAEG NMVL SY LL VFIIIFI G S T HY ILN T F FEGI GDYLQN I V G MSLW S DA QK D S GW QNS WT AY YW P WW MT W 327
Cdd:COG1292 251 V S GLD KG I K RLSNL NMVL AL LL LLFVLIV G P T LF ILN L F VQSL GDYLQN F V P MSLW T DA YG D T GW LGG WT VF YW A WW IA W 330
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 328 APFVGLFIARIS K GRTIR QVI LG S L AA PTL L TFLW IAA FGG A A LKI E KS thqpttssivtntattvsvdkvpa HELTIT E 407
Cdd:COG1292 331 APFVGLFIARIS R GRTIR EFV LG V L LV PTL F TFLW FSV FGG T A IHL E LN ------------------------ GGGDLA E 386
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 408 A TKQDPAR A V F VFFDH L TPSS dtki ILS A L LCL L LA I HVI T LVN SG I LVL CF L D S Y G ATD P SIGI R LI W SII I P L IGGG L 487
Cdd:COG1292 387 A VAAGVEA A L F ALLEQ L PLGT ---- ILS V L AII L VI I FFV T SAD SG S LVL AM L T S G G DEE P PRWQ R IF W GVL I G L VAAV L 462
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 491426283 488 LLAGGL T A IK TA C II AGF P I S IL L GI MC F SL MRS LREDP KVQERE 532
Cdd:COG1292 463 LLAGGL S A LQ TA S II TAL P F S FV L LL MC V SL VKA LREDP RRLRSA 507
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
15-525
8.83e-170
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 490.13
E-value: 8.83e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 15 V TIA S KL L LFI F IAFCIFKEKQAGEYFQLISNVLLQ N AK W YL LLL ATSL LVF L L Y L CM SR F G Q I K LG K D NE KPE Y S NLA W 94
Cdd:pfam02028 1 V FAV S AG L ILA F VLLGLIFPEALSAVVNTALDWITD N FG W FY LLL VLIF LVF A L F L AF SR Y G N I R LG G D DD KPE F S TFS W 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 95 IC MLF SC GMGIGL M FW S VAEP I SHY A S N P FT - PGLSD E S A RM AM QL TFFHWGLH P W GLFC LVA V AL G YF S YRK D LP FAMR 173
Cdd:pfam02028 81 FA MLF AA GMGIGL V FW G VAEP L SHY L S P P PG g EPGTP E A A QQ AM AY TFFHWGLH A W AIYA LVA L AL A YF A YRK G LP LLIS 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 174 S I LYPL I G KK I Y GPIG DIV D T L T I VI T A FG ISQ SL SM G I L EL N T GL NHT FGI NMDVKI QL ILVLVLC AL A TIS LL S AIS K 253
Cdd:pfam02028 161 S A LYPL L G DR I D GPIG KAI D I L A I IA T V FG VAT SL GL G A L QI N A GL SYL FGI PNTLTT QL AIIAIIT AL F TIS AV S GLD K 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 254 G F K FIAEG NM V L SYL L VFIIIFI G S T HY ILNTF FEGI GDYLQN I V G MS LWS D A - QKDS GW QNS WT AY YW P WW MT WAPFVG 332
Cdd:pfam02028 241 G I K RLSNL NM Y L AVA L LLFVLIA G P T LF ILNTF VQSL GDYLQN F V P MS FYT D P f GDTG GW LGG WT IF YW A WW IA WAPFVG 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 333 L FIARIS K GRTIR QV ILG S L AA PTL L TFLW IAA FGG A A LKI E KS thqpttssivtntattvsvdkvpa HELTITE A TKQD 412
Cdd:pfam02028 321 M FIARIS R GRTIR EF ILG V L LV PTL F TFLW FSV FGG T A IYL E LN ------------------------ GPGDLAD A VEAG 376
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 413 P AR A V F VFFDH L TPSS dtki ILS A L LC LL LA I HVI T LVN SG I LV LCF L D S Y G ATD P SIGI R LI W SIIIPLIGGG LLLAGG 492
Cdd:pfam02028 377 P PA A L F ALLEQ L PLGT ---- ILS V L AL LL II I FFV T SAD SG T LV IAM L S S G G DLN P PRWQ R VF W GVLLGAVAAV LLLAGG 452
490 500 510
....*....|....*....|....*....|...
gi 491426283 493 L T A IKT A C IIA GF P I S IL L GI MC F SL MRS LRE D 525
Cdd:pfam02028 453 L E A LQS A S IIA AL P F S FI L LL MC I SL FKA LRE E 485
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
54-525
2.41e-124
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 372.84
E-value: 2.41e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 54 W YLL L LA T SL L V F L LY LCM SR F G Q I K LG K D N EKPE Y S N L A W IC MLF SC GMG I GLMFW S VAEP ISH Y ASN PF TP G LSDES A 133
Cdd:TIGR00842 2 W AYI L TV T LF L G F V LY IAF SR Y G K I R LG R D D EKPE F S T L S W LA MLF AA GMG A GLMFW G VAEP LTY Y LTP PF GA G PTSTT A 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 134 - RM A MQL T F FHWG L HPW GLFC LV AV AL G YF SY RK D LP FAMR S I L Y PL I G K K IY GPIG DIV D T L TI V I T A FG ISQ SL SM G I 212
Cdd:TIGR00842 82 q EQ A LAY T L FHWG I HPW AIYA LV GL AL A YF HF RK G LP LRLS S A L V PL L G E K VN GPIG KAI D I L AL V A T V FG VAT SL GL G A 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 213 LEL N T GL NHT FGI NMDVKI Q LILV L VLC ALA T IS LL S AIS KG F K FIAEG NM V L SY LL VFIIIFI G S T HYI LN T F FEG IG D 292
Cdd:TIGR00842 162 PQI N A GL SAL FGI PDSFWL Q ALII L CVT ALA C IS VA S GVG KG I K ILSNI NM A L AF LL LLFVLIV G P T VFL LN S F VDS IG N 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 293 YLQN IVG MS LWS D A - QKDS GW QNS WT AY YW P WW MT W A PFVG L FIARIS K GRTIR QV I L G S L AA PT LL T F LW IAA FG GA AL 371
Cdd:TIGR00842 242 YLQN FPQ MS FRT D P d DGKG GW PGG WT VF YW A WW IS W S PFVG M FIARIS R GRTIR EF I F G V L LG PT AF T W LW FSV FG NS AL 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 372 KIE ksthqpttssiv T N TAT tvsvdkvpahe LTITEATKQDP ARA V F VFFDH L TPSSD T kiil S AL LCL L LA I HV IT LVN 451
Cdd:TIGR00842 322 LLQ ------------ Q N GGF ----------- INGPFVVETNG ARA L F GLLAA L PLGTI T ---- M AL ALI L II I FF IT SAD 374
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 491426283 452 S GI LVL CFLD S Y G A --- TD P SIGI R LI W SII I P LI GGG LL LA - G G L T A IK T AC IIA GF P I S ILLGIMC FSL MRS L RE D 525
Cdd:TIGR00842 375 S AS LVL ANTT S R G G qlg EE P PKWV R VF W AVA I G LI ALV LL FS g G S L A A LQ T TT IIA AL P F S FVMLVVM FSL IKD L KQ D 452
PRK09928
PRK09928 choline transport protein BetT; Provisional
11-525
6.22e-124
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 379.43
E-value: 6.22e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 11 L NP T V TIA S KL L LFI F IAFC I FKEKQAGEYFQLIS N VLLQNAK WY L LL L AT SLL VF LLYLCM SRFG Q IKLG KDNE KPE Y S 90
Cdd:PRK09928 15 I NP V V FYT S AG L ILL F SLTT I LFTDFSNRWINRTL N WVSKTFG WY Y LL A AT LYI VF VIFIAC SRFG S IKLG PEQS KPE F S 94
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 91 N L A W IC MLF SC G M GI G LMF W SVAEP ISH Y ASN P FTP G LSD E S AR M AM QL T F FH W GL HP W GLFC L VAV ALGYFSYR KD LP F 170
Cdd:PRK09928 95 L L S W AA MLF AA G I GI D LMF F SVAEP VTQ Y MQP P EGA G QTI E A AR Q AM VW T L FH Y GL TG W SMYA L MGM ALGYFSYR YN LP L 174
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 171 AM RS I LYP LI GK K I Y GPIG DI VD TLTIVI T A FGI SQS L SM G ILE LN T GL NHT F G I NMDVKI Q LI L VLVLCAL ATIS LL S A 250
Cdd:PRK09928 175 TI RS A LYP IF GK R I N GPIG HS VD IAAVIG T I FGI ATT L GI G VVQ LN Y GL SVL F D I PESLAA Q AA L IALSVII ATIS VT S G 254
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 251 IS KG FKFIA E G N MV L SYL L VFIII F I G S T HYI LN TFFEGI GDY LQNIV GM S L W S D A - QKDSG W Q N S WT AYY W P WW MT W A P 329
Cdd:PRK09928 255 VN KG IRVLS E L N VL L ALG L ILFVL F M G D T SFL LN ALVLNV GDY VNRFM GM T L N S F A f DRPTE W M N N WT LFF W A WW VA W S P 334
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 330 FVGLF I ARIS K GRTIRQ VI LG S L AA P TLL T F LW IAA FG GA AL kieksthqpttssivtntattvsv DKVPAHELTIT E AT 409
Cdd:PRK09928 335 FVGLF L ARIS R GRTIRQ FV LG T L II P FTF T L LW LSI FG NS AL ------------------------ YEIIHGNAAFA E EA 390
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 410 KQD P A R AVFVFFDH ----- LTP S SD T kiilsallc LLLAIHVI T LVN SG I LVL CFLD S YGA --- T D PSIGI R LI WS II I P 481
Cdd:PRK09928 391 MAH P E R GFYSLLAQ ypaft FSA S VA T --------- ITGLLFYV T SAD SG A LVL GNFT S KLK din S D APNWL R VF WS VA I G 461
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 491426283 482 L IGG G L L LAG G LT A IKTACI I A G F P I S ILLGIMCFS L MR SL R - ED 525
Cdd:PRK09928 462 L LTL G M L MTN G IS A LQNTTV I M G L P F S FVIFFVMAG L YK SL K v ED 506
PRK09950
PRK09950 putative transporter; Provisional
13-371
5.96e-54
putative transporter; Provisional
Pssm-ID: 236636
Cd Length: 506
Bit Score: 190.77
E-value: 5.96e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 13 P TVTIASKLLL FI FI A FCI F KE --- KQ A GEY FQ LISNVLLQNAK wyll L LATSLLVFL LYL CM S RF G Q I K LG KD ne KPEY 89
Cdd:PRK09950 11 P LISTSLLAVF FI VA A LSL F PQ qsa AA A NTI FQ WVTRTFGSPVQ ---- L FVLLAMILV LYL AT S KY G N I R LG EG -- KPEY 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 90 S N L A W IC M LFSC G M G IGLMF W S V A E PISH Y A snpf TPGL ----- S DESARMAMQLT FFHWG LHP W GLFC L VAVALG Y - F S 163
Cdd:PRK09950 85 S T L S W LF M FICA G L G SSTLY W G V M E WAYY Y Q ---- TPGL niapr S PKALEYSVSYS FFHWG ISA W ATYA L ASLIMA Y h F H 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 164 Y RK DLPFAMRS I LYPLI G K K IY GP I G DI VD TLTIVI T AFGISQ SL SMGILELNT GL NHTF G INMDVKI Q LILV L VLCALA 243
Cdd:PRK09950 161 V RK NKGLSLSG I IAAIT G V K PQ GP W G RL VD LMFLIA T VGALTI SL VVTAATFTR GL SALT G LPNNFTV Q AFVI L LSGVIF 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 244 TI S LLSA I SK G FKFIAEGNMVLSY L LVFIIIFI G S T HY I L N TFFEG IG DYL QN IVG MSL WS D AQK D SGWQNS WT AY YW P W 323
Cdd:PRK09950 241 CL S SYIG I DN G LQRLSKMVGWGAF L FALLVLIV G P T EF I T N NIINS IG LTT QN FLQ MSL FT D PMG D GSFTRN WT VF YW L W 320
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 491426283 324 W MTWA P F V GL F IA R I S K GR T I RQ VI L G SLAAPTLLTFLWIAAFGGA A L 371
Cdd:PRK09950 321 W ISYT P G V AM F VT R V S R GR K I KE VI W G LILGSSVGCWFFFGVLESY A I 368
PRK03356
PRK03356 L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
21-371
1.29e-50
L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
Pssm-ID: 179568
Cd Length: 504
Bit Score: 181.86
E-value: 1.29e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 21 L LLFIFIAFCIFKEKQ A G ----- EY F QLIS NV LLQNAK WY LLLLA tsll VFLLY L CMSRFGQIK LG kd N EKPE Y S NLA WI 95
Cdd:PRK03356 19 L IIVGILCWLTVRDLD A A nvvin AV F SYVT NV WGWAFE WY MVVML ---- FGWFW L VFGPYAKKR LG -- D EKPE F S TAS WI 92
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 96 C M L F SCGMGIGLM FW SVA E PISHYASN PF - TPGL S DESARMAMQLTF FHWG LH PW GLFCLVA VA L GYF SY - RK DLPFAMR 173
Cdd:PRK03356 93 F M M F ASCTSAAVL FW GSI E IYYYISTP PF g LEPN S TGAKELGLAYSL FHWG PL PW ATYSFLS VA F GYF FF v RK MDVIRPS 172
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 174 S I L Y PL I G K K - IY G PI G D IVD TLTI V ITA F GISQ SL SMGILELNTGLNHT FGI NMDVKIQL I LVLVLCA L AT I SLLSAIS 252
Cdd:PRK03356 173 S T L V PL V G E K h AK G LF G T IVD NFYL V ALI F AMGT SL GLATPLVTECMQWL FGI PHTLQLDA I IITCWII L NA I CVACGLQ 252
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491426283 253 KG FKFIAEGNMV LS Y L LVFIIIFI G S T HY I L N T F FEGI G DY L QNIVG M SLWS D AQKDS G WQNS WT AY YW P WW MTW A PFVG 332
Cdd:PRK03356 253 KG VRIASDVRSY LS F L MLGWVFIV G G T SF I M N Y F TDSV G ML L MYLPR M LFYT D PIGKG G FPQG WT VF YW A WW VIY A IQMS 332
330 340 350
....*....|....*....|....*....|....*....
gi 491426283 333 L F I ARIS K GRT I R QVIL G SLAAP T LL T FLWIAAF G GAA L 371
Cdd:PRK03356 333 I F L ARIS R GRT V R ELCF G MVLGL T AS T WILWTVL G SNT L 371
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
