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Conserved domains on  [gi|492049557|ref|WP_005732650|]
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MULTISPECIES: DUF1653 domain-containing protein [Pseudomonas]

Protein Classification

DUF1653 domain-containing protein( domain architecture ID 10008772)

DUF1653 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG4728 COG4728
Uncharacterized conserved protein, DUF1653 family [Function unknown];
3-69 7.43e-40

Uncharacterized conserved protein, DUF1653 family [Function unknown];


:

Pssm-ID: 443763  Cd Length: 68  Bit Score: 125.31  E-value: 7.43e-40
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 492049557  3 LQPGLYRHYKGPQYRVFSVARHSETEEEVVFYQALYGDFGMWVRPLSMFLESVEVDGEHVPRFALVE 69
Cdd:COG4728   2 IKPGIYRHYKGNLYEVLGVARHSETEEPLVVYRALYGDGGLWVRPLAMFLETVEVDGEQVPRFELIG 68
 
Name Accession Description Interval E-value
COG4728 COG4728
Uncharacterized conserved protein, DUF1653 family [Function unknown];
3-69 7.43e-40

Uncharacterized conserved protein, DUF1653 family [Function unknown];


Pssm-ID: 443763  Cd Length: 68  Bit Score: 125.31  E-value: 7.43e-40
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 492049557  3 LQPGLYRHYKGPQYRVFSVARHSETEEEVVFYQALYGDFGMWVRPLSMFLESVEVDGEHVPRFALVE 69
Cdd:COG4728   2 IKPGIYRHYKGNLYEVLGVARHSETEEPLVVYRALYGDGGLWVRPLAMFLETVEVDGEQVPRFELIG 68
DUF1653 pfam07866
Protein of unknown function (DUF1653); This is a family of hypothetical bacterial proteins of ...
 6-66 2.85e-36

Protein of unknown function (DUF1653); This is a family of hypothetical bacterial proteins of unknown function.


Pssm-ID: 462294  Cd Length: 61  Bit Score: 116.06  E-value: 2.85e-36
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 492049557   6 GLYRHYKGPQYRVFSVARHSETEEEVVFYQALYGDFGMWVRPLSMFLESVEVDGEHVPRFA 66
Cdd:pfam07866  1 GIYRHFKGGLYEVIGVARHSETEEELVVYRALYGDYGLWVRPLDMFLETVEVDGEKYPRFE 61
 
Name Accession Description Interval E-value
COG4728 COG4728
Uncharacterized conserved protein, DUF1653 family [Function unknown];
3-69 7.43e-40

Uncharacterized conserved protein, DUF1653 family [Function unknown];


Pssm-ID: 443763  Cd Length: 68  Bit Score: 125.31  E-value: 7.43e-40
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 492049557  3 LQPGLYRHYKGPQYRVFSVARHSETEEEVVFYQALYGDFGMWVRPLSMFLESVEVDGEHVPRFALVE 69
Cdd:COG4728   2 IKPGIYRHYKGNLYEVLGVARHSETEEPLVVYRALYGDGGLWVRPLAMFLETVEVDGEQVPRFELIG 68
DUF1653 pfam07866
Protein of unknown function (DUF1653); This is a family of hypothetical bacterial proteins of ...
 6-66 2.85e-36

Protein of unknown function (DUF1653); This is a family of hypothetical bacterial proteins of unknown function.


Pssm-ID: 462294  Cd Length: 61  Bit Score: 116.06  E-value: 2.85e-36
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 492049557   6 GLYRHYKGPQYRVFSVARHSETEEEVVFYQALYGDFGMWVRPLSMFLESVEVDGEHVPRFA 66
Cdd:pfam07866  1 GIYRHFKGGLYEVIGVARHSETEEELVVYRALYGDYGLWVRPLDMFLETVEVDGEKYPRFE 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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