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Conserved domains on  [gi|495778590|ref|WP_008503169|]
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MULTISPECIES: fimbria/pilus periplasmic chaperone [Enterobacter]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15188 super family cl33103
fimbrial chaperone protein BcfB; Provisional
 19-234 2.34e-98

fimbrial chaperone protein BcfB; Provisional


The actual alignment was detected with superfamily member PRK15188:

Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 285.89  E-value: 2.34e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  19 LLLTMGLATNASAGGIALGATRVIYPQGDKQVSLPVINSSADNTFLIQSWVANVEGIKSPDFILTPPLFVIHPKKENTLR 98
Cdd:PRK15188  14 LLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPPLFVIQPKKENILR 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  99 IMYIGPDLPADRETVFYLNSKAIPSVDKNKLQGNTLQIATQSVIKLFIRPKKLTSLSVDAPKTLTCRTENGKVIITNPSP 178
Cdd:PRK15188  94 IMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSP 173

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 495778590 179 YYVSLVQFFVGGTRLPNSMVAPKNTLTVDipgGGSGSVKFQTVNDFGANTPTQICS 234
Cdd:PRK15188 174 YYVSMVELYSAGKKLPNTMVPPKGAITLP---ATPGQVSLRTVNDFGATTPARVCP 226
 
Name Accession Description Interval E-value
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 19-234 2.34e-98

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 285.89  E-value: 2.34e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  19 LLLTMGLATNASAGGIALGATRVIYPQGDKQVSLPVINSSADNTFLIQSWVANVEGIKSPDFILTPPLFVIHPKKENTLR 98
Cdd:PRK15188  14 LLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPPLFVIQPKKENILR 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  99 IMYIGPDLPADRETVFYLNSKAIPSVDKNKLQGNTLQIATQSVIKLFIRPKKLTSLSVDAPKTLTCRTENGKVIITNPSP 178
Cdd:PRK15188  94 IMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSP 173

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 495778590 179 YYVSLVQFFVGGTRLPNSMVAPKNTLTVDipgGGSGSVKFQTVNDFGANTPTQICS 234
Cdd:PRK15188 174 YYVSMVELYSAGKKLPNTMVPPKGAITLP---ATPGQVSLRTVNDFGATTPARVCP 226
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
12-232 1.18e-73

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 223.71  E-value: 1.18e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  12 RLMMAGTLLLTMGLATNASAGGIALGATRVIYPQGDKQVSLPVINSSaDNTFLIQSWVANVEGIKSPD-----FILTPPL 86
Cdd:COG3121    3 RLLRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTG-DTPYLVQSWVDDWDQDAGPDkatapFVVTPPL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  87 FVIHPKKENTLRIMYIGPDLPADRETVFYLNSKAIPSVDKNKLQGNTLQIATQSVIKLFIRPKKLTSLSVDAPKTLTCRT 166
Cdd:COG3121   82 FRLEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSL 161

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 495778590 167 ENGKVIITNPSPYYVSLVQFFV--GGTRLP--NSMVAPKNTLTVDIPGG----GSGSVKFQTVNDFGANTPTQI 232
Cdd:COG3121  162 VGNGLTVTNPGPYYVTLSDLSLgaGGKKLKkgLGMVLPGSTRRWPLPAGaslaAGGKVTWATINDYGGAVPLEA 235
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 34-151 3.53e-43

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 141.96  E-value: 3.53e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590   34 IALGATRVIYPQGDKQVSLPVINSSaDNTFLIQSWVANVEGIKSPD-----FILTPPLFVIHPKKENTLRIMYIGPDLPA 108
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTG-DNPYLVQSWVDDGNEEGTDEkakapFIVTPPLFRLEPGQEQVLRIYTTGPPLPT 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 495778590  109 DRETVFYLNSKAIPSVDKNKLQGNTLQIATQSVIKLFIRPKKL 151
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPAGL 122
 
Name Accession Description Interval E-value
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 19-234 2.34e-98

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 285.89  E-value: 2.34e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  19 LLLTMGLATNASAGGIALGATRVIYPQGDKQVSLPVINSSADNTFLIQSWVANVEGIKSPDFILTPPLFVIHPKKENTLR 98
Cdd:PRK15188  14 LLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPPLFVIQPKKENILR 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  99 IMYIGPDLPADRETVFYLNSKAIPSVDKNKLQGNTLQIATQSVIKLFIRPKKLTSLSVDAPKTLTCRTENGKVIITNPSP 178
Cdd:PRK15188  94 IMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSP 173

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 495778590 179 YYVSLVQFFVGGTRLPNSMVAPKNTLTVDipgGGSGSVKFQTVNDFGANTPTQICS 234
Cdd:PRK15188 174 YYVSMVELYSAGKKLPNTMVPPKGAITLP---ATPGQVSLRTVNDFGATTPARVCP 226
PRK15195 PRK15195
molecular chaperone FimC;
19-229 1.52e-81

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 243.23  E-value: 1.52e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  19 LLLTMGLATNA-SAGGIALGATRVIYPQGDKQVSLPVINSSADNTFLIQSWVANVEGIKSPDFILTPPLFVIHPKKENTL 97
Cdd:PRK15195  11 IIFYLIISASVhAAGGIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGVKEKSFIVTPPLFVSEPKSENTL 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  98 RIMYIGPDLPADRETVFYLNSKAIPSVDKNKLQG-NTLQIATQSVIKLFIRPKKLTSLSVDAPKTLTCRTENGKVIITNP 176
Cdd:PRK15195  91 RIIYAGPPLAADRESLFWMNVKAIPSVDKNALEGrNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSRSGNHLKVHNP 170

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 495778590 177 SPYYVSLVQFFVGGTRLPNSMVAPKNTLTVDIPGGGSGSVKFQTVNDFGANTP 229
Cdd:PRK15195 171 SPYYVTLVNLQVGSQKLGNAMIAPKVNSQIPLPSGVQGKLKFQTVNDYGAVTP 223
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
12-232 1.18e-73

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 223.71  E-value: 1.18e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  12 RLMMAGTLLLTMGLATNASAGGIALGATRVIYPQGDKQVSLPVINSSaDNTFLIQSWVANVEGIKSPD-----FILTPPL 86
Cdd:COG3121    3 RLLRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTG-DTPYLVQSWVDDWDQDAGPDkatapFVVTPPL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  87 FVIHPKKENTLRIMYIGPDLPADRETVFYLNSKAIPSVDKNKLQGNTLQIATQSVIKLFIRPKKLTSLSVDAPKTLTCRT 166
Cdd:COG3121   82 FRLEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSL 161

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 495778590 167 ENGKVIITNPSPYYVSLVQFFV--GGTRLP--NSMVAPKNTLTVDIPGG----GSGSVKFQTVNDFGANTPTQI 232
Cdd:COG3121  162 VGNGLTVTNPGPYYVTLSDLSLgaGGKKLKkgLGMVLPGSTRRWPLPAGaslaAGGKVTWATINDYGGAVPLEA 235
PRK15208 PRK15208
molecular chaperone LpfB;
19-226 5.00e-55

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 175.87  E-value: 5.00e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  19 LLLTMGLATNASAGGIALGATRVIYPQGDKQVSLPVINSSADNTFLIQSWVANVEGIKSPDFILTPPLFVIHPKKENTLR 98
Cdd:PRK15208   8 ALALALIAQNSFAGGVALSSTRVIYDGSKKEASLTVNNKSKTEEFLIQSWIDDANGNKKTPFIITPPLFKLDPTKNNVLR 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  99 IMYIGPDLPADRETVFYLNSKAIPSVDKNKLQGNTLQIATQSVIKLFIRPKKLTSLSVDAPKTLTCRTENGKVIITNPSP 178
Cdd:PRK15208  88 IVNITNTLPQDRESVYWINVKAIPAKSEDAENKNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRFTRAGNQIKVENPSA 167

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 495778590 179 YYVSLVQFFVGGTRLPNS-MVAPKNTLTVDIPGG-GSGS-VKFQTVNDFGA 226
Cdd:PRK15208 168 FNLTFNQFYANGRDIEKAgMVPAKGSLNIELPAGtGKVSeVKYNIINDFGT 218
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 34-151 3.53e-43

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 141.96  E-value: 3.53e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590   34 IALGATRVIYPQGDKQVSLPVINSSaDNTFLIQSWVANVEGIKSPD-----FILTPPLFVIHPKKENTLRIMYIGPDLPA 108
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTG-DNPYLVQSWVDDGNEEGTDEkakapFIVTPPLFRLEPGQEQVLRIYTTGPPLPT 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 495778590  109 DRETVFYLNSKAIPSVDKNKLQGNTLQIATQSVIKLFIRPKKL 151
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPAGL 122
PRK09926 PRK09926
fimbrial chaperone;
16-227 1.71e-42

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 144.09  E-value: 1.71e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  16 AGTLLLTMGLATNASAGGIALGATRVIYPQGDKQVSLPVINSsADNTFLIQSWV------ANVEGIKSPdFILTPPLFVI 89
Cdd:PRK09926   9 TALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENK-GNNPLLVQSWLdtgddnAEPGSIKVP-FTATPPVSRI 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  90 HPKKENTLRIMYIGPD-LPADRETVFYLNSKAIP--SVDKNKLQGNTLQIATQSVIKLFIRPKKLTSLSVDAPKTLTCR- 165
Cdd:PRK09926  87 DPKRGQTIKLMYTASTaLPKDRESVFWFNVLEVPpkPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPLALKWSw 166

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 495778590 166 -TENGKVIIT--NPSPYYVSL--VQFFVGGTRLP--NSMVAPKNTLTVDIPG----GGSGSVKFQTVNDFGAN 227
Cdd:PRK09926 167 aGSEGKASLRvtNPTPYYVSFssGDLEAGGKRYPvdSKMIAPFSDESMKVKGlsgkASSGKVHFYAINDFGGA 239
lfpB PRK15290
fimbrial chaperone;
19-226 5.21e-41

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 140.51  E-value: 5.21e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  19 LLLTMGLATNASA-GGIALGATRVIYPQGDKQVSLPVINSSADNTFLIQSWVA--NVEGIKSPDFILTPPLFVIHPKKEN 95
Cdd:PRK15290  23 IILSVFLGQPALTyAGVVIGGTRVVYLSNNPDKSISVFSKEEKIPYLIQAWVDpfNKEDKSKAPFTVIPPVSRLEPSQEK 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  96 TLRIMYI-GPDLPADRETVFYLNSKAIPSVDKNKlQGNTLQIATQSVIKLFIRPKKLTSLSVDAPKTLTCRTENGKVIIT 174
Cdd:PRK15290 103 VLRIIHTkGVSLPDDRESVFWLNIKNIPPSASNK-ATNSLEIAVKTRIKLFWRPASIRLIPEDAAPKVKWRREGRNLIAE 181

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 495778590 175 NPSPYYVSLVQFFVGGTRLPNSMVAPKNTLTVDIPGGGSG-SVKFQTVNDFGA 226
Cdd:PRK15290 182 NPNPIHISVMDVIVDGHDVPLNMIRPFETLTLPLPANSAGgQMTWRFINDYGA 234
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 10-229 3.87e-35

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 124.89  E-value: 3.87e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  10 LSRLMMAGtLLLTMGLATNASAGGIALGATRVIYPQGDKQVSLPVINSsaDNT-FLIQSWVANV-EGIKSPD--FILTPP 85
Cdd:PRK15299   1 MNSLAKAG-LLCCLLCGSLAHAAGINIGTTRVIFHGDAKDASISISNS--DNVpYLIQSWAQSIsETGASGDapFMVTPP 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  86 LFVIHPKKENTLRIMYIGPDLPADRETVFYLNSKAIPSVDKNKlQGNTLQIATQSVIKLFIRPKKLTSLSVDAPKTLTCR 165
Cdd:PRK15299  78 LFRLNGGQKNVLRIIRTGGNLPEDRESLYWLDIKSIPSSNPDN-KHNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWS 156

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 495778590 166 TENGKVIITNPSPYYVSLVQFFVGGTRLPN-SMVAPKNTLTVDIPGGGSGSVKFQTVNDFGANTP 229
Cdd:PRK15299 157 RQGRTLTVKNPTPYYMNFATLSVGSQKVKApRYVAPFGNAQYTLPAAASGPIAWSIINDFGGTGP 221
PRK15211 PRK15211
fimbrial chaperone;
36-226 7.66e-33

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 118.77  E-value: 7.66e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  36 LGATRVIYPQGDKQVSLPVINSSaDNTFLIQSWVANV-EGIKSPDFILTPPLFVIHPKKENTLRIMYIGPDLPADRETVF 114
Cdd:PRK15211  26 LNGTRFIYDEGRKNISFEVTNQA-DQTYGGQVWIDNTtQGSSTVYMVPAPPFFKVRPKEKQIIRIMKTDSALPKDRESLF 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590 115 YLNSKAIPSVDKNKlQGNTLQIATQSVIKLFIRPKKLTSLSVDAPKTLTCRTENGKVIITNPSPYYVSLVQFFVGGTRLP 194
Cdd:PRK15211 105 WLNVQEIPPKPKAS-EGNVLAVALNTQVKLIYRPKALKEGRENAEKNLQIIHRGGETYLKNPTPYYFAVTGVKLNGQPVK 183

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 495778590 195 NS--------MVAPKNTLTVDIPGGGsGSVKFQTVNDFGA 226
Cdd:PRK15211 184 LSdrvmneiaQLAPFSEVSLGKLSLN-GTVTVQAVNDWGG 222
PRK15295 PRK15295
fimbrial assembly chaperone;
20-225 3.09e-31

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 114.66  E-value: 3.09e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  20 LLTMGLATNASAGGIALGATRVIYPQGDKQVSLPVINSSAdNTFLIQSWVANVEGiKSPD---FILTPPLFVIHPKKENT 96
Cdd:PRK15295   7 VLVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDS-KANLVQSWLSVVDP-QVTNkqaFIITPPLFRLDAGQKNS 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  97 LRIMYIGPDLPADRETVFYLNSKAIPSVDKNKlQGNTLQIATQSVIKLFIRPKKLTSLSVDA-PKTLTCRTENGKVIITN 175
Cdd:PRK15295  85 IRVIRSGAPLPADRESMYWLNIKGIPSIDDNA-SANRVEISINTQIKLIYRPPALTKSTPDSqSQQLKWQTAGDVITVNN 163

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 495778590 176 PSPYYVSLVQFFVGGTRLPNS-MVAPKNTLTVDIPGGGS--GSVKFQTVNDFG 225
Cdd:PRK15295 164 PTPYYMNFASVTLNSHEVKSAtFVPPKSSASFKLGSTAAphGTVTWRLISDYG 216
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
25-225 8.47e-29

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 108.25  E-value: 8.47e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  25 LATNASAGGIALGATRVIYPQGDKQVSLPVINSSaDNTFLIQSWV--------ANVEGIKSPdFILTPPLFVIHPKKENT 96
Cdd:PRK15192  15 LPISWAQAGVVIGGTRFIYHAGAPALSVPVSNHS-EASWLIDTHIlpggrwpgTKNEGNITP-FVVTPPLFMLSARQENS 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  97 LRIMYIGPDLPADRETVFYLNSKAIPSvdkNKLQGNTLQIATQSVIKLFIRPKKLTSLSVDAPKTLTCRTENGKVIITNP 176
Cdd:PRK15192  93 MRVVYTGAPLPADRESLFTLSIAAIPS---GKPEANRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLTPDGATVRNP 169

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 495778590 177 SPYYVSLVQFFVGGTRLPNS-MVAPKNTLTVD-IPGGGSGSVKFQTVNDFG 225
Cdd:PRK15192 170 TPYYVTLFLLRANERAQDNAgVVAPFATRQTDwCRHTVRCTVRWQSINDYG 220
PRK15285 PRK15285
fimbrial chaperone StfD;
10-229 2.27e-26

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 102.55  E-value: 2.27e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  10 LSRLMMAGTLLLTMGLATNASAGgIALGATRVIYPQGDKQVSLPVINSSADNTFLIQSWVANVEGIK-SPDFILTPPLFV 88
Cdd:PRK15285   4 LKRYNLAAVLLLLLGGYGSAQAA-IAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKiTSPLIVVPPVQR 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  89 IHPKKENTLRI--MYIGPDLPADRETVFYLNSKAIPSVDKnklQGNTLQIATQSVIKLFIRPKKLTSLSVDAP--KTLTC 164
Cdd:PRK15285  83 IEPSAIGQVKIqgMPALASLPQDRETLFYYNVREIPPQSD---KPNTLQIALQTRIKVFYRPQALSKIDMQHPwqYKITL 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 495778590 165 RTENGKVIITNPSPYYVSLVQffvGGTRLPNS--------MVAPKNTLTVDIPGGGSGSVKFQT-VNDFGANTP 229
Cdd:PRK15285 160 QRQGNGYQVSNPTGYYVVLSN---ASNRMDGTpargfsplVIAPKSNVTLGGDASELGHSPVLTyVNDYGARLP 230
PRK15249 PRK15249
fimbrial chaperone;
1-226 8.44e-26

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 101.03  E-value: 8.44e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590   1 MQMNTSPTSLSRLMmagtLLLTMGLATNASAGGIALGATRVIYPQGDKQVSLPVINSSaDNTFLIQSWVANVEGIKSPD- 79
Cdd:PRK15249   1 MKMDTRHSALYYLI----VFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKNND-AIPYIVQTWFDDGDMNTSPEn 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  80 -----FILTPPLFVIHPKKENTLRIMYIGPD-LPADRETVFYLNSKAIPSVD-KNKLQGNTLQIATQSVIKLFIRPKKLT 152
Cdd:PRK15249  76 ssampFIATPPVFRIQPKAGQVVRVIYNNTKkLPQDRESVFWFNVLQVPPTNiGSDSGQNKMLVMLRSRIKLFYRPDGLG 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590 153 S-------LSVdapKTLTCRTENGKVIITNPSPYYVSL--VQFFVGGT--RLPNSMVAPKNTLTVDIPG-----GGSGSV 216
Cdd:PRK15249 156 KpdnlakkLQI---KTVNKGSGKSGIVIVNPQPWFASLsnLNVKVNGAsyNLDADMIAPFSSQTWWLPGkrslkSFSGTV 232

                        250
                 ....*....|
gi 495778590 217 KFQTVNDFGA 226
Cdd:PRK15249 233 TVTLVNDQGA 242
PRK15224 PRK15224
pili assembly chaperone PapD;
25-228 5.12e-25

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 98.66  E-value: 5.12e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  25 LATNASAGGIALGATRVIYPQGDKQVSLPVINSSaDNTFLIQSWVANVEGIKSPDFILTPPLFVIHPKKENTLRIMYIGP 104
Cdd:PRK15224  21 LNLNTKSFSVKLGATRVIYHAGTAGATLSVSNPQ-NYPILVQSSVKAADKSSPAPFLVMPPLFRLEANQQSQLRIVRTGG 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590 105 DLPADRETVFYLNSKAIPSVDK---NKLQGNT--LQIATQSVIKLFIRPKKLTSLSVDAPKTLTCRTENGKVIITNPSPY 179
Cdd:PRK15224 100 DMPTDRETLQWVCIKAVPPENEpsdTQAKGATldLNLSINVCDKLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPF 179

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 495778590 180 YVSLVQFFVGGTRLPN-SMVAPKNTLTVDIPGGGSGSVKFQTVNDFGANT 228
Cdd:PRK15224 180 YMNLASVTVGGKPITGlEYIPPFADKTLNMPGSAHGDIEWRVITDFGGES 229
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 19-183 8.64e-25

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 97.92  E-value: 8.64e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  19 LLLTMGLA-TNASAGGIALGATRVIYPQGDKQVSLPVINSSADNTFLIQSWVANVEGIKSPDFILTPPLFVIHPKKENTL 97
Cdd:PRK15254   2 ILLALAAAwSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDALMALPPLQRIDAGQKSQV 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  98 RIMYI---GPDLPADRETVFYLNSKAIPSVDKNKlqgNTLQIATQSVIKLFIRPKKLTSLSVDAP-KTLTCRTENGKVII 173
Cdd:PRK15254  82 RITQVrglTDKLPQDRETLFWFNVRGVPPKPEDD---NVLQLAMQSQLKLFYRPKAIIRSSSDQPeRKLTAERNAGHLTL 158

                        170
                 ....*....|
gi 495778590 174 TNPSPYYVSL 183
Cdd:PRK15254 159 RNPTPYYITV 168
PRK11385 PRK11385
fimbrial chaperone;
11-226 4.96e-24

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 95.97  E-value: 4.96e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  11 SRLMMAGTLLLTMGLATNASAGgIALGATRVIYPQGDKQVSLPVINSSADnTFLIQS-------WVANVEGIKSPDFILT 83
Cdd:PRK11385   6 NRLALLIFAVLSLLVAGELQAG-VVVGGTRFIFPADRESISILLTNTSQE-SWLINSkinrptrWAGGEASTVPAPLLAA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  84 PPLFVIHPKKENTLRIMYIGPD-LPADRETVFYLNSKAIPSvdkNKLQGNTLQIATQSVIKLFIRPKKLTSLSVDAPKTL 162
Cdd:PRK11385  84 PPLILLKPGTTGTLRLLRTESDiLPVDRETLFELSIASVPS---GKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQL 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 495778590 163 TCRTENGKVIITNPSPYYVSLVQFFVGGTRLPNSMVAPKNT--LTVDIPGGGSGSVKFQTVNDFGA 226
Cdd:PRK11385 161 RWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNAGVVPPKSqrQTSWCQAIAPCHVAWRAINDYGG 226
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 33-225 1.49e-23

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 94.73  E-value: 1.49e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  33 GIALGATRVIYPQGDKQVSLPVINSSaDNTFLIQSWVAN------VEGIKSPdFILTPPLFVIHPKKENTLRIMYIGPDL 106
Cdd:PRK15253  34 GIVIYGTRVIYPAEKKEVVVQLVNQG-EQASLVQSWIDDgntslpPEKIQVP-FMLTPPVARVAAESGQQIKIKKMPNSL 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590 107 PADRETVFYLNSKAIPSVDKNKLQGNTLQIATQSVIKLFIRPKKLTSLSVDAPKTLTCRTENGKVIITNPSPYYVSLVQF 186
Cdd:PRK15253 112 PDNKESLFYLNVLDIPPNSQENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGLFRSNKTVIMKNDTANWITVTDV 191

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 495778590 187 FVGGTRLPNS--MVAPKNTLTVDIPGGGSGSVKFQTVNDFG 225
Cdd:PRK15253 192 KAGNTKINDQtiMLPPLSTQNINMKYASTSQYEVTIIDDNG 232
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 10-227 4.47e-19

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 83.29  E-value: 4.47e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  10 LSRLMMAGTLLLTMGLATNASaggIALGATRVIYPQGDKQVSLPVINSSADNTFLIQSWVANVEGIKSPD-FILTPPLFV 88
Cdd:PRK15274   7 FKRQALIASVLLAAPLVSHSA---IVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRyFTALPPLQR 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  89 IHPKKENTLRIMYI--GPDLPADRETVFYLNSKAIPSVDKnklQGNTLQIATQSVIKLFIRPkklTSLSVDAPKT----- 161
Cdd:PRK15274  84 IEPKSDGQVKVQPLpaAASLPQDRESLFYFNVREIPPKSD---KPNTLQLALQTRIKFFYRP---VAVARQVDKThpwqt 157

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 495778590 162 -LTCRTENGKVIITNPSPYYVSLVQffvGGTR-------LPNSMVAPKNTLTVDIPGGGSGSVK-FQTVNDFGAN 227
Cdd:PRK15274 158 kLTLTYQGDGVIFDNPTPFYLVISN---AGSKenetasgFKNLLIAPREKVTSPIKGASLGSSPvVGYVDDYGGH 229
PRK15246 PRK15246
fimbrial assembly chaperone;
23-225 1.68e-18

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 81.16  E-value: 1.68e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  23 MGLATNASAGGIALGATRVIYPQGDKQVSLPVINSSaDNTFLIQSWVANVEGIKSPD-----FILTPPLFVIHPKKENTL 97
Cdd:PRK15246   1 LTGWYGPAQAAVNIDRTRIIFASDDVAQSLTLSNDN-TTPMLLQVWTDAGNIDASPDnsktpLVALPPVFKMQPGELRTL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  98 RIMYIG-PDLPADRETVFYLNSKAIPSVDKN-KLQGNTLQIATQSVIKLFIRPKKLTSLSVDAPKTLTCRTENGKVIITN 175
Cdd:PRK15246  80 RLLLSSrQQLATDRESLFWLNIYQIPPVTQDiKNHPRKLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIVN 159

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 495778590 176 PSPYYVSLVQFFVGGTRLPNSMVAPKNTLTVDI---PGGGSgSVKFQTVNDFG 225
Cdd:PRK15246 160 PTSWYMSLTLTMDNKKSIGDIMVAPKTALDVPLtrsPTPGA-SINYAVINDSG 211
PRK15218 PRK15218
fimbrial assembly chaperone;
15-206 2.05e-17

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 78.10  E-value: 2.05e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  15 MAGTLLLTMGLATNASAGGIALGATRVIYPQGDKQVSLPVINSSADNTfLIQSWVAN------VEGIKSPdFILTPPLFV 88
Cdd:PRK15218   1 MKWMIALCLACAAMPAWSGIYIYGTRIIYPAQKKDITVQLMNDGKRSS-LIQAWIDNgdtslpPEKLQVP-FIMTPPVIR 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  89 IHPKKENTLRIMYIGPDLPADRETVFYLNSKAIPSVDKNKLQGNTLQIATQSVIKLFIRPKKLTSLSVDAPKTLTCRTEN 168
Cdd:PRK15218  79 VAANSGQQLKIKKLANNLPGDRESLFYLNVLDIPPNSDENKDKNIIKFALQNRIKLIYRPPGVQKVDKATFSRLQLLRAP 158

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 495778590 169 GKVIITNPSPYYVSLVQfFVGGTRLPNS--MVAPKNTLTV 206
Cdd:PRK15218 159 GSISVKNNSANWITIPE-IKAKSKVNKEtlLLAPWSSQSI 197
PRK15233 PRK15233
fimbrial chaperone SefB;
33-226 4.79e-16

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 74.76  E-value: 4.79e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  33 GIALGATRVIYPQGDKQVSLPVINSSaDNTFLIQSWVANVEGIKSPDFILTPPLFVIHPKKENTLRIMYIGPDLPADRET 112
Cdd:PRK15233  41 GLRLGTTRVIYKEDAPSTSFWIMNEK-EYPILVQTQVYNDDKSSKAPFIVTPPILKVESNARTRLKVIPTSNLFNKNEES 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590 113 VFYLNSKAIP------SVDKNKLQGN-TLQIATQSVIKLFIRPKKLTSLSVDAPKTLTCRTENGKVIITNPSPYYVSLVQ 185
Cdd:PRK15233 120 LYWLCVKGVPplndneSNNKNNITTNlNVNVVTNSCIKLIYRPKTIDLTTMEIADKLKLERKGNSIVIKNPTSSYVNIAN 199

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 495778590 186 FFVGGT--RLPNSMVAPKNtlTVDIPGGGSGSVKFQTVNDFGA 226
Cdd:PRK15233 200 IKSGNLsfNIPNGYIEPFG--YAQLPGGVHSKITLTILDDNGA 240
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 173-229 2.27e-10

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 54.96  E-value: 2.27e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 495778590  173 ITNPSPYYVSLVQFFVGGT----RLPNSMVAPKNTLTVD--IPGGGSGSVKFQTVNDFGANTP 229
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGgkelALDPGMVAPFSSQTFAglPAPAAGGTVSYTYINDYGGIVP 63
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 6-218 3.80e-10

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 57.74  E-value: 3.80e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590   6 SPTSLSRLMMAGTLLLTmglATNASAGGIALGATRVIYPQGDKQVSLPVINSSADNTFLIQSwVANVEGIKSPDFILTPP 85
Cdd:PRK09918   1 NRFNLFFLFTALVLLSS---SSAVHAAGMVPETSVVIVEESDGEGSINVKNTDSNPILLYTT-LVDLPEDKSKLLLVTPP 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495778590  86 LFVIHPKKENTLRIMYIGpDLPADRETVFYLNSKAIPSVDKNKlqgNTLQIATQSVIKLFIRPKKLTSlsVDAP-KTLTC 164
Cdd:PRK09918  77 VARVEPGQSQQVRFILKS-GSPLNTEHLLRVSFEGVPPKPGGK---NKVVMPIRQDLPVLIQPAALPV--VRDPwKLLVW 150

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 495778590 165 RTENGKVIITNPSPYYVSL---VQFFVGGT--RLPNSMVAPKNTLTVDIPGGGSG--SVKF 218
Cdd:PRK09918 151 SISGNNLVVSNPSPYVVRLgqqVILLPSGKvvALPKPYILPGESLTVAITNSKATdtKVRF 211
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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