NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|498119101|ref|WP_010433257|]
View 

MULTISPECIES: acetolactate synthase 2 small subunit [Vibrio]

Protein Classification

acetolactate synthase 2 small subunit( domain architecture ID 10013748)

acetolactate synthase 2 small subunit is the regulatory subunit of the enzyme complex that catalyzes the biosynthesis of (2S)-2-acetolactate

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ilvM PRK11152
acetolactate synthase 2 small subunit;
1-75 1.97e-34

acetolactate synthase 2 small subunit;


:

Pssm-ID: 236862  Cd Length: 76  Bit Score: 112.66  E-value: 1.97e-34
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 498119101  1 MKRYLLDIKADDKPVLLERVLRVIRHRGFIVKQVAGTQNQESKVASVEIIVDSDRPISFLVNQIEKLWDVRTVDV 75
Cdd:PRK11152  1 MMQHQLTIKARFRPEVLERVLRVVRHRGFQVCSMNMTQNTDAQNINIELTVASERPIDLLSSQLNKLVDVAHVEI 75
 
Name Accession Description Interval E-value
ilvM PRK11152
acetolactate synthase 2 small subunit;
1-75 1.97e-34

acetolactate synthase 2 small subunit;


Pssm-ID: 236862  Cd Length: 76  Bit Score: 112.66  E-value: 1.97e-34
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 498119101  1 MKRYLLDIKADDKPVLLERVLRVIRHRGFIVKQVAGTQNQESKVASVEIIVDSDRPISFLVNQIEKLWDVRTVDV 75
Cdd:PRK11152  1 MMQHQLTIKARFRPEVLERVLRVVRHRGFQVCSMNMTQNTDAQNINIELTVASERPIDLLSSQLNKLVDVAHVEI 75
IlvM COG3978
Acetolactate synthase small subunit, contains ACT domain [Amino acid transport and metabolism]; ...
 1-76 1.66e-26

Acetolactate synthase small subunit, contains ACT domain [Amino acid transport and metabolism];


Pssm-ID: 443177  Cd Length: 75  Bit Score: 92.59  E-value: 1.66e-26
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 498119101  1 MKRYLLDIKADDKPVLLERVLRVIRHRGFIVKQVAGTQNQESKVaSVEIIVDSDRPISFLVNQIEKLWDVRTVDVI 76
Cdd:COG3978   1 MMQYQLTIEARRRPGALERVLRVVRHRGFEVRSMNMEANDGDGL-NIELTVSSDRPIELLTRQLEKLYDVESVEVL 75
ACT_5 pfam13710
ACT domain; ACT domains bind to amino acids and regulate associated enzyme domains. These ACT ...
 12-73 1.06e-16

ACT domain; ACT domains bind to amino acids and regulate associated enzyme domains. These ACT domains are found at the C-terminus of the RelA protein.


Pssm-ID: 463962  Cd Length: 62  Bit Score: 67.61  E-value: 1.06e-16
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 498119101  12 DKPVLLERVLRVIRHRGFIVKQVAGTQNQESKVASVEIIVDSDRPISFLVNQIEKLWDVRTV 73
Cdd:pfam13710  1 DRPGVLERVLRVVRRRGFHVTSMNMSATEDGGLVRIQLTVESDRSVELLLNQLEKLYDVVKV 62
 
Name Accession Description Interval E-value
ilvM PRK11152
acetolactate synthase 2 small subunit;
1-75 1.97e-34

acetolactate synthase 2 small subunit;


Pssm-ID: 236862  Cd Length: 76  Bit Score: 112.66  E-value: 1.97e-34
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 498119101  1 MKRYLLDIKADDKPVLLERVLRVIRHRGFIVKQVAGTQNQESKVASVEIIVDSDRPISFLVNQIEKLWDVRTVDV 75
Cdd:PRK11152  1 MMQHQLTIKARFRPEVLERVLRVVRHRGFQVCSMNMTQNTDAQNINIELTVASERPIDLLSSQLNKLVDVAHVEI 75
IlvM COG3978
Acetolactate synthase small subunit, contains ACT domain [Amino acid transport and metabolism]; ...
 1-76 1.66e-26

Acetolactate synthase small subunit, contains ACT domain [Amino acid transport and metabolism];


Pssm-ID: 443177  Cd Length: 75  Bit Score: 92.59  E-value: 1.66e-26
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 498119101  1 MKRYLLDIKADDKPVLLERVLRVIRHRGFIVKQVAGTQNQESKVaSVEIIVDSDRPISFLVNQIEKLWDVRTVDVI 76
Cdd:COG3978   1 MMQYQLTIEARRRPGALERVLRVVRHRGFEVRSMNMEANDGDGL-NIELTVSSDRPIELLTRQLEKLYDVESVEVL 75
ACT_5 pfam13710
ACT domain; ACT domains bind to amino acids and regulate associated enzyme domains. These ACT ...
 12-73 1.06e-16

ACT domain; ACT domains bind to amino acids and regulate associated enzyme domains. These ACT domains are found at the C-terminus of the RelA protein.


Pssm-ID: 463962  Cd Length: 62  Bit Score: 67.61  E-value: 1.06e-16
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 498119101  12 DKPVLLERVLRVIRHRGFIVKQVAGTQNQESKVASVEIIVDSDRPISFLVNQIEKLWDVRTV 73
Cdd:pfam13710  1 DRPGVLERVLRVVRRRGFHVTSMNMSATEDGGLVRIQLTVESDRSVELLLNQLEKLYDVVKV 62
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH