|
Name |
Accession |
Description |
Interval |
E-value |
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
12-764 |
1.53e-79 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 268.26 E-value: 1.53e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 12 AIAAVLSANAQAQQADAGATTLDTVIVTGTRaSDRTVLESTVPVDVLTAEDIRKAGVVNgeLGSALQaLLPSFNFPRQSN 91
Cdd:COG4771 6 LLLLLALAAQAADALAEDATELEEVVVTATR-TEQSLSDAPASVSVITAEEIEKLGATD--LADALR-LLPGVSVTRSGG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 92 SGGADHIRaaqLRGLSPDQVLVLVNGKRRHTSALvntdskigkgTTPVDFNSIPINAIKRIEVLRDGAGAQYGSDAIAGV 171
Cdd:COG4771 82 RGGSSGIS---IRGLGGDRVLVLIDGVPVNNPAL----------GGGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGV 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 172 INVILDDNPERGELEASFGAYNTDVAPIDrrvtdgqtsyASAKVGTllGDDGGFFKVGLELKNREATNRAGFDqipsfee 251
Cdd:COG4771 149 INIITKKPTDELEGSVSLGYGSNGNGTYS----------GSLSLGG--PGDKLSFLLSGSYRDRDGYLDYRNG------- 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 252 qtpanlalrgqrnYVLGDGATKGLNAWLNSKVPFSANGEFYAFGTYNQRDTEGanyfrypDSSANWREIYPNGYRPISEG 331
Cdd:COG4771 210 -------------GFVGNSGYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDG-------GPPTLGDTEISSDNAGDRDT 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 332 ENRDLQLVAGARGQWGnWDYDASVNYGRNDftyrlRNSLNASLGPGSTTRFKTGDFafaQTVGNFDLTRVLdaaGATHTF 411
Cdd:COG4771 270 TTDRGNYSLRYNGDLG-DNLDLSLYYSRTD-----RDSTNGSLGGSTGSFSDSDDT---TYGLELDLTYPL---GGNHTL 337
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 412 GTGAEFRREQYRTHagdpasyaagpftdrptgsqaggglTPQDEADLSRNVASAYANVSSQFGDKFSTDLAGRYEHYQDF 491
Cdd:COG4771 338 TLGAEYRYDDLDSS-------------------------SFLGGADASRDTYGLFAQDEWKLTDKLTLTAGLRYDYYSTF 392
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 492 G----SQWTGKLAARYAFAPAFALRGAISNNVRAPSLSQIGYEATSTgydaagrltqgrllsvnnPIARGLGATDLKPEK 567
Cdd:COG4771 393 GasnyTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGTGT------------------PGRYVLGNPDLKPET 454
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 568 SVNYSLGFTSKVGD-HFDVSLDFFQIDIDDRIALSEDitgdaltsfvqqnygVTGVQSASYFLNAADTRTRGAELVANWR 646
Cdd:COG4771 455 SDNYELGLEYRLGNgGLSLSLTGFYTDIKDLIVLVPV---------------GPGPGDVLQYENVGKARTYGLELELKYR 519
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 647 qyaFGGDLLLTGTYSYAKTELENiiatpaqllalnpeyvlfgvEESNTLTDAAPRTRASLAANWSNEHWNLQTRVNRYGS 726
Cdd:COG4771 520 ---LGKGLTLTASYTYLDSKIDD--------------------GDTGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYG 576
|
730 740 750
....*....|....*....|....*....|....*...
gi 499364077 727 ATRVFDFGGgfVPRQTYGAEWQLDLEAEYHLGTQWTLA 764
Cdd:COG4771 577 GRYVTPPSG--RLEGYTPGYTLLDLRASYKLTKNLTLS 612
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
54-811 |
3.67e-64 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 226.56 E-value: 3.67e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 54 PVDVLTAEDIRKAGVVNgeLGSALQALlPSFNFPRQSNSGGadhiRAAQLRGLSPDQVLVLVNGKRRHTSALVNtdskig 133
Cdd:cd01347 1 SVSVITAEDIEKQPATS--LADLLRRI-PGVSVTRGGGGGG----STISIRGFGPDRTLVLVDGLPLASSNYGR------ 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 134 kgttPVDFNSIPINAIKRIEVLRDGAGAQYGSDAIAGVINVILDDNPERGELEASFGAYNtdvapidrrvtDGQTSYASA 213
Cdd:cd01347 68 ----GVDLNTIPPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGS-----------DNSGSSGGG 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 214 KVGTLL---GDDGGFFKVGLELKNREATNRAGFDQIPSFEEQTPANLAlrgqrnyvlgdgatkgLNAWLNSKVPFSANGE 290
Cdd:cd01347 133 GFDVSGalaDDGAFGARLYGAYRDGDGTIDGDGQADDSDEERYNVAGK----------------LDWRPDDDTRLTLDAG 196
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 291 FYAFGTYNQRDTEGANYFRYPDSSANWREIYPNGYRPISEGENRDLQLVAGARGQWGNWDYDASVNYGRNDFTYRLRNSL 370
Cdd:cd01347 197 YQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRDRYRKRASLGLEHDLNDTGWTLRANLSYSYTDNDGDPLILN 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 371 NASLGPGSTTRFKTGDFAFAQTVGNFD--LTRVLDAAGATHTFGTGAEFRREQYRThagdpasyaagpftdrptgsqagg 448
Cdd:cd01347 277 GGNNAAGGDLGRSGYSSERDTTQLGFDagLNAPFGTGPVAHTLTLGVEYRREELDE------------------------ 332
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 449 gltpqdeadlsrNVASAYANVSSQFGDKFSTDLAGRYEHY--------------QDFGSQWTGKLAARYAFAPAFALRGA 514
Cdd:cd01347 333 ------------KQTALYAQDTIELTDDLTLTLGLRYDHYdqdskdtiaggttaKKSYSHWSPSLGLVYKLTDGLSLYAS 400
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 515 ISNNVRAPSLSQIGYEATSTGYDAagrltqgrllsvnnpiargLGATDLKPEKSVNYSLGFTSKVGDHFDVSLDFFQIDI 594
Cdd:cd01347 401 YSQGFRAPSLGELYGGGSHGGTAA-------------------VGNPNLKPEKSKQYELGLKYDPGDGLTLSAALFRIDI 461
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 595 DDRIALSEDITGDALTsfvqqnygvtgvqsaSYFLNAADTRTRGAELVAnwrQYAFGGDLLLTGTYSYAKTELENIIATP 674
Cdd:cd01347 462 KNEIVSTPTNTGLGLV---------------TVYVNGGKARIRGVELEA---SYDLTDGLGLTGSYTYTDTEVKRTDGAT 523
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 675 aqllalnpeyvlfgveESNTLTDaAPRTRASLAANWS--NEHWNLQTRVNRYGSATRVFDFGGGfvpRQTYGAEWQLDLE 752
Cdd:cd01347 524 ----------------TGNRLPG-IPKHTANLGLDYElpDEGLTAGGGVRYRGKQYADTANGNN---TVKVPGYTLVDLS 583
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*....
gi 499364077 753 AEYHLGTQWTLAIGGQNILDNYSDRSIDDIAYFGNLPYdvlspigSNGAYWYGRVRYSF 811
Cdd:cd01347 584 ASYQFTKNLTLRLGVNNLFDKDYYTSLSVRGSGLYGYY-------GPGRTYYLSVSYKF 635
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
288-787 |
7.87e-31 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 127.19 E-value: 7.87e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 288 NGEFYAFGTYNQRDTEGANYFRYPDSSANWREIYPNGYRPISEGENRDLQLVA----GARGQWGNwDYDASVNYGRNDFT 363
Cdd:pfam00593 15 LTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYdydlGDGLSWLS-TLRLGLRYSSLDGD 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 364 YRLRNSLNASLGP-GSTTRFKTGDFAFAQTVGNFDLTRvldaagaTHTFGTGAEFRREQYRTHAGDPASYAAGPFTDRPT 442
Cdd:pfam00593 94 YTSNSSGLSGAGDyLSDDRLYGLYGLDGDLELSLDLSH-------DLLLGVELRTAGLDYRRLDDDAYDPYDPANPSSSS 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 443 GSqagggltpqdeaDLSRNVASAYANVSSQFGDKFSTDLAGRYEHYQDFG--------------SQWTGKLAARYAFAPA 508
Cdd:pfam00593 167 YS------------DTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGddgngggdnfsrsySAFSPRLGLVYKPTDN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 509 FALRGAISNNVRAPSLSQIGYEAtstgydaagrltqgrllSVNNPIARGLGATDLKPEKSVNYSLGFTSKvGDHFDVSLD 588
Cdd:pfam00593 235 LSLYASYSRGFRAPSLGELYGSG-----------------SGGGGGAVAGGNPDLKPETSDNYELGLKYD-DGRLSLSLA 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 589 FFQIDIDDRIALSEDITGDALTSFVQQNYGvtgvqsasyflnaaDTRTRGAELVANWRQYafgGDLLLTGTYSYAKTELE 668
Cdd:pfam00593 297 LFYIDIKNLITSDPDGPGLGGTVYTYTNVG--------------KARIRGVELELSGRLW---GLGLSGGGYTYTDADDD 359
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 669 NIIATPAQLLalnpeyvlfgveesntltDAAPRTRASLAANW--SNEHWNLQTRVNRYGSATRVFDFGGGFVPRQTYgae 746
Cdd:pfam00593 360 ADADDTGNPL------------------PNVPRHTANLGLTYdfPLGGWGARLGARYVGSGERRYGDAANTFKTPGY--- 418
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 499364077 747 WQLDLEAEYHLGTQWTLAIGGQNILDNYSDRSIDDIAYFGN 787
Cdd:pfam00593 419 TLVDLSAGYRLNKNLTLRLGVNNLFDKYYKRYYSSGGGNLG 459
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
1-666 |
2.00e-26 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 115.26 E-value: 2.00e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 1 MTRPTLSVIGMAIAAVLSANAQAQQADAGATTLDTVIVTGTrASDRTVLESTVPVDVLTAEDIRKAGVVNgeLGSALQAL 80
Cdd:PRK13483 1 MKKYLAQVISALCLLPAVFVTHALAQAAPDKTMETVVVTAS-GYEQQIRDAPASISVITREDLENRFYRD--LTDALLDV 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 81 lpsfnfPRQSNSGGADHiRAAQLRGLSPDQVLVLVNGKR---RHTSAlvNTDSK-IGKGTTPvdfnsiPINAIKRIEVLR 156
Cdd:PRK13483 78 ------PGVVVTGGGDR-TDISLRGMGSQYTLILVDGKRqssRETRP--NSDGPgVEQAWTP------PLAAIERIEVIR 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 157 DGAGAQYGSDAIAGVINVILDDNPE--RGELEASfgayntdvAPIDRRVTDGQTSYASAKVGTLLGDDggffKVGLELKN 234
Cdd:PRK13483 143 GPMSSLYGSDAIGGVINIITRKVPNewQGEVRLD--------TTLQENSDSGNVYQANFFVNGPLIKD----LLGLQLYG 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 235 ReaTNRAGFDQIPS-FEEQT----PANLALRGQRNYVL---GDGATKGLNAWLNSKVPFSANGEfyafgtynqrdTEGAN 306
Cdd:PRK13483 211 Q--YTQREEDDIEGgYRDKDarslTAKLALTPNEDHDImleVGTSNQERDSTVGKTVAPLAPGE-----------SCGRR 277
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 307 yfRYPDSSANwreIYPNGYRPISEGenrdlqlvagargqwGNWDYDASVNYGRNDftyrlrnslnaslgpgsTTRFKTGD 386
Cdd:PRK13483 278 --GCPESSTT---EYERSTVSLSHT---------------GRWDFGTSDTYIQHE-----------------EFDNKSRE 320
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 387 FAFAQTVGNFDLTRVLdaaGATHTFGTGAEFRREQyrthagdpasyaagpFTDRpTGSQAgggltpQDEADLSRNVASAY 466
Cdd:PRK13483 321 MKIKNTDFQSSLVAPL---GQEHTLTFGAAYNHQD---------------LTDE-TSNQI------SDLTDISRTQWAVF 375
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 467 ANVSSQFGDKFSTDLAGRYEHYQDFGSQWTGKLAARYAFAPAFALRGAISNNVRAPSLSQI--GYEATSTGYDAAGrltq 544
Cdd:PRK13483 376 SEDEWRIADDFALTGGLRLDHDENFGGHVSPRVYGVWNLAPSWTVKGGVSTGFRAPSLRQTtpDWGQVSRGGNIYG---- 451
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 545 grllsvnNPiarglgatDLKPEKSVNYSLGFTSKVGDHFDVSLDFFQIDIDD---RIALSEDITGDALTSFvqqnyGvtg 621
Cdd:PRK13483 452 -------NP--------DLKPETSLNKELGLYYDLGSGLTASLTVFYNEFKDkitRVACPATQCTDGPNQF-----G--- 508
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 499364077 622 vQSASYFLNAADTRTRGAELVANWRqyaFGGDLLLTGTYSYAKTE 666
Cdd:PRK13483 509 -ADPTTYVNIDEAVTQGVEASLSYP---ITSTLSLSGNYTYTDSE 549
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
33-644 |
1.73e-21 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 99.55 E-value: 1.73e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 33 LDTVIVTGTRaSDRTVLESTVPVDVLTAEDIRKAGVvngelgSALQALLPSFNFPRQSNSGGADHIRAAQLRGLSPDQVL 112
Cdd:TIGR01779 28 LDTVVVTANR-FAQTASQTLAPVTIITRQDIERTQA------KSLPELLRRLPGVSIAQNGGRGQNTSLFLRGTESDHVL 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 113 VLVNGKRRHTSalvntdskiGKGTTpvDFNSIPINAIKRIEVLRDGAGAQYGSDAIAGVINVilddnpergeleasfgay 192
Cdd:TIGR01779 101 VLIDGIRFGSA---------AAGAA--DFQQLPVELVERIEYVRGPRSSLYGSEAIGGVINI------------------ 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 193 ntdvapIDRRVTDGQTSYASAKVGTLLGDDGGFfkvglelknreatnrAGFDQIPSfeeqtpanlalRGQRNYVLGDGAT 272
Cdd:TIGR01779 152 ------ITRRRSGGQGTTLSAGLGSLDYQEYSI---------------ASGVAIGE-----------NGWYSVALGTEST 199
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 273 KGLNAWLnskvpfsangefyAFGTYNQRDTEGanyfrYPDSSANWReiypNGYRpisegENRDLQLVAGARGQWGNWDYD 352
Cdd:TIGR01779 200 KGINVRP-------------GGPGVYDPDRDG-----FRSDSLLLG----GGHR-----FDESWSLFVNALRYENRNDYD 252
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 353 ASVnYGRNDFTYRLRNSLNASLGPGSTTRF----------KTGDFAFAQTVGNFDLT-------------RVLDAAGatH 409
Cdd:TIGR01779 253 NYS-FGTRLYKEAEKGDQSFTGGRQRQSERdvseltlstgKSKDWDYAYSKGRYSSTsdtreqrniqwqnDLLVGDG--W 329
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 410 TFGTGAEFRREQYRTHAGdpasyaagpftdrptgsqagggltpqDEADLSRNVAsAYANVSSQFGDkFSTDLAGRYEHYQ 489
Cdd:TIGR01779 330 VLAGGVDWQKDSIISSTA--------------------------DKEDDRSNTA-AFAQVLQQWGQ-QLLEASLRRDDNQ 381
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 490 DFGSQWTGKLAARYAFAPAFALRGAISNNVRAPSLSQIGYEatstgydaagrltqgrllSVNNPiarglgatDLKPEKSV 569
Cdd:TIGR01779 382 QFGSHTTGSIAWGYQFIEELRFTASYGTAFKAPNLNQLYYP------------------SYGNP--------NLQPETSK 435
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 499364077 570 NYSLGFTSKV-GDHFDVSLdfFQIDIDDRIALSEditgdalTSFVQQNygvtgvqsasyflNAADTRTRGAELVAN 644
Cdd:TIGR01779 436 SAELGFYGLFsGGKWSISG--YRTKINDLIDYDS-------HPKGYPN-------------NIGEARIKGVEATAE 489
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
12-764 |
1.53e-79 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 268.26 E-value: 1.53e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 12 AIAAVLSANAQAQQADAGATTLDTVIVTGTRaSDRTVLESTVPVDVLTAEDIRKAGVVNgeLGSALQaLLPSFNFPRQSN 91
Cdd:COG4771 6 LLLLLALAAQAADALAEDATELEEVVVTATR-TEQSLSDAPASVSVITAEEIEKLGATD--LADALR-LLPGVSVTRSGG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 92 SGGADHIRaaqLRGLSPDQVLVLVNGKRRHTSALvntdskigkgTTPVDFNSIPINAIKRIEVLRDGAGAQYGSDAIAGV 171
Cdd:COG4771 82 RGGSSGIS---IRGLGGDRVLVLIDGVPVNNPAL----------GGGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGV 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 172 INVILDDNPERGELEASFGAYNTDVAPIDrrvtdgqtsyASAKVGTllGDDGGFFKVGLELKNREATNRAGFDqipsfee 251
Cdd:COG4771 149 INIITKKPTDELEGSVSLGYGSNGNGTYS----------GSLSLGG--PGDKLSFLLSGSYRDRDGYLDYRNG------- 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 252 qtpanlalrgqrnYVLGDGATKGLNAWLNSKVPFSANGEFYAFGTYNQRDTEGanyfrypDSSANWREIYPNGYRPISEG 331
Cdd:COG4771 210 -------------GFVGNSGYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDG-------GPPTLGDTEISSDNAGDRDT 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 332 ENRDLQLVAGARGQWGnWDYDASVNYGRNDftyrlRNSLNASLGPGSTTRFKTGDFafaQTVGNFDLTRVLdaaGATHTF 411
Cdd:COG4771 270 TTDRGNYSLRYNGDLG-DNLDLSLYYSRTD-----RDSTNGSLGGSTGSFSDSDDT---TYGLELDLTYPL---GGNHTL 337
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 412 GTGAEFRREQYRTHagdpasyaagpftdrptgsqaggglTPQDEADLSRNVASAYANVSSQFGDKFSTDLAGRYEHYQDF 491
Cdd:COG4771 338 TLGAEYRYDDLDSS-------------------------SFLGGADASRDTYGLFAQDEWKLTDKLTLTAGLRYDYYSTF 392
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 492 G----SQWTGKLAARYAFAPAFALRGAISNNVRAPSLSQIGYEATSTgydaagrltqgrllsvnnPIARGLGATDLKPEK 567
Cdd:COG4771 393 GasnyTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGTGT------------------PGRYVLGNPDLKPET 454
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 568 SVNYSLGFTSKVGD-HFDVSLDFFQIDIDDRIALSEDitgdaltsfvqqnygVTGVQSASYFLNAADTRTRGAELVANWR 646
Cdd:COG4771 455 SDNYELGLEYRLGNgGLSLSLTGFYTDIKDLIVLVPV---------------GPGPGDVLQYENVGKARTYGLELELKYR 519
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 647 qyaFGGDLLLTGTYSYAKTELENiiatpaqllalnpeyvlfgvEESNTLTDAAPRTRASLAANWSNEHWNLQTRVNRYGS 726
Cdd:COG4771 520 ---LGKGLTLTASYTYLDSKIDD--------------------GDTGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYG 576
|
730 740 750
....*....|....*....|....*....|....*...
gi 499364077 727 ATRVFDFGGgfVPRQTYGAEWQLDLEAEYHLGTQWTLA 764
Cdd:COG4771 577 GRYVTPPSG--RLEGYTPGYTLLDLRASYKLTKNLTLS 612
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
54-811 |
3.67e-64 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 226.56 E-value: 3.67e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 54 PVDVLTAEDIRKAGVVNgeLGSALQALlPSFNFPRQSNSGGadhiRAAQLRGLSPDQVLVLVNGKRRHTSALVNtdskig 133
Cdd:cd01347 1 SVSVITAEDIEKQPATS--LADLLRRI-PGVSVTRGGGGGG----STISIRGFGPDRTLVLVDGLPLASSNYGR------ 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 134 kgttPVDFNSIPINAIKRIEVLRDGAGAQYGSDAIAGVINVILDDNPERGELEASFGAYNtdvapidrrvtDGQTSYASA 213
Cdd:cd01347 68 ----GVDLNTIPPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGS-----------DNSGSSGGG 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 214 KVGTLL---GDDGGFFKVGLELKNREATNRAGFDQIPSFEEQTPANLAlrgqrnyvlgdgatkgLNAWLNSKVPFSANGE 290
Cdd:cd01347 133 GFDVSGalaDDGAFGARLYGAYRDGDGTIDGDGQADDSDEERYNVAGK----------------LDWRPDDDTRLTLDAG 196
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 291 FYAFGTYNQRDTEGANYFRYPDSSANWREIYPNGYRPISEGENRDLQLVAGARGQWGNWDYDASVNYGRNDFTYRLRNSL 370
Cdd:cd01347 197 YQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRDRYRKRASLGLEHDLNDTGWTLRANLSYSYTDNDGDPLILN 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 371 NASLGPGSTTRFKTGDFAFAQTVGNFD--LTRVLDAAGATHTFGTGAEFRREQYRThagdpasyaagpftdrptgsqagg 448
Cdd:cd01347 277 GGNNAAGGDLGRSGYSSERDTTQLGFDagLNAPFGTGPVAHTLTLGVEYRREELDE------------------------ 332
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 449 gltpqdeadlsrNVASAYANVSSQFGDKFSTDLAGRYEHY--------------QDFGSQWTGKLAARYAFAPAFALRGA 514
Cdd:cd01347 333 ------------KQTALYAQDTIELTDDLTLTLGLRYDHYdqdskdtiaggttaKKSYSHWSPSLGLVYKLTDGLSLYAS 400
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 515 ISNNVRAPSLSQIGYEATSTGYDAagrltqgrllsvnnpiargLGATDLKPEKSVNYSLGFTSKVGDHFDVSLDFFQIDI 594
Cdd:cd01347 401 YSQGFRAPSLGELYGGGSHGGTAA-------------------VGNPNLKPEKSKQYELGLKYDPGDGLTLSAALFRIDI 461
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 595 DDRIALSEDITGDALTsfvqqnygvtgvqsaSYFLNAADTRTRGAELVAnwrQYAFGGDLLLTGTYSYAKTELENIIATP 674
Cdd:cd01347 462 KNEIVSTPTNTGLGLV---------------TVYVNGGKARIRGVELEA---SYDLTDGLGLTGSYTYTDTEVKRTDGAT 523
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 675 aqllalnpeyvlfgveESNTLTDaAPRTRASLAANWS--NEHWNLQTRVNRYGSATRVFDFGGGfvpRQTYGAEWQLDLE 752
Cdd:cd01347 524 ----------------TGNRLPG-IPKHTANLGLDYElpDEGLTAGGGVRYRGKQYADTANGNN---TVKVPGYTLVDLS 583
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*....
gi 499364077 753 AEYHLGTQWTLAIGGQNILDNYSDRSIDDIAYFGNLPYdvlspigSNGAYWYGRVRYSF 811
Cdd:cd01347 584 ASYQFTKNLTLRLGVNNLFDKDYYTSLSVRGSGLYGYY-------GPGRTYYLSVSYKF 635
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
33-772 |
3.84e-49 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 184.26 E-value: 3.84e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 33 LDTVIVTGTRaSDRTVLESTVPVDVLTAEDIRKAGVVNgeLGSALQaLLPSFNFprQSNSGGADHIRaaqLRGLS--PDQ 110
Cdd:COG1629 1 LEEVVVTATR-TDESLQDVPGSVSVISREQLEDQPATD--LGDLLR-RVPGVSV--TSAGGGAGQIS---IRGFGggGNR 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 111 VLVLVNGKRRHTSALVNTDskigkgttpvdFNSIPINAIKRIEVLRDGAGAQYGSDAIAGVINVILDDNPE--RGELEAS 188
Cdd:COG1629 72 VLVLVDGVPLNDPSGGDGG-----------LSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDgkGGEVSAS 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 189 FGAYNTdvapidrRVTDGQTSYASAKVGTLLgddggffkvglelknreatnragfdqipsfeeqtpaNLALRGQRNYVlG 268
Cdd:COG1629 141 YGSYGT-------YRASLSLSGGNGKLAYRL------------------------------------SASYRDSDGYR-D 176
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 269 DGATKGLNAWLNSKVPFSANGEFYAFGTYNQRDTEGANYFryPDSSANWREIYPNGYRPISEGENRDLQLVAGARGQW-- 346
Cdd:COG1629 177 NSDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDSPGYL--TLAALRPRGAMDDGTNPYSNDTDDNTRDRYSLSLEYeh 254
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 347 --GNWDYDASVNYGRNDFTYRlrnsLNASLGPGSTTRFKTGDFAFAQTVGNFDLTRVLDaAGATHTFGTGAEFRREQYRt 424
Cdd:COG1629 255 lgDGLKLSASAYYRYDDTDLD----SDFTPTPADGGTLEQTDFDNRTYGLELRLTYDLG-FGGKHTLLVGLDYQRQDLD- 328
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 425 hagdpasyaaGPFTDRPTGSQAGGGLTPQDEADLSRNVASAYANVSSQFGDKFSTDLAGRYEHYQDFG------------ 492
Cdd:COG1629 329 ----------GSGYPLDLGSGSLPTLTSGADDDGTTTSLALYAQDTYKLTDKLTLTAGLRYDYVSYDVddtvtgtdsasg 398
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 493 ----SQWTGKLAARYAFAPAFALRGAISNNVRAPSLSQIGYEATSTgydaagrltqgrlLSVNNPiarglgatDLKPEKS 568
Cdd:COG1629 399 srsySAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYANGTDP-------------YSVGNP--------DLKPETS 457
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 569 VNYSLGF-TSKVGDHFDVSLDFFQIDIDDRIalseditgdaLTSFVQQNYGVTgvqsaSYFLNAADTRTRGAELVANWRq 647
Cdd:COG1629 458 TNYELGLrYRLLDGRLSLSLALFYSDVDNEI----------LSVPLPNDSGFS-----TYYTNAGKARSYGVELELSYQ- 521
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 648 yaFGGDLLLTGTYSYAKTELENIIATPAQLlalnpeyvlfgveeSNTLTDAAPRTRASLAANWS-NEHWNLQTRVNRYGS 726
Cdd:COG1629 522 --LTPGLSLNASYSYTDAKFDDDTDGSADL--------------DGNRLPGVPPLTANLGLTYEfPGGWSLGLGVRYVGD 585
|
730 740 750 760
....*....|....*....|....*....|....*....|....*.
gi 499364077 727 atRVFDFGGGFVPRQTYgaeWQLDLEAEYHLGTQWTLAIGGQNILD 772
Cdd:COG1629 586 --RYLDDANTQGAPGGY---TLVDLGAGYRFGDNLTLSLGVDNLFD 626
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
288-787 |
7.87e-31 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 127.19 E-value: 7.87e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 288 NGEFYAFGTYNQRDTEGANYFRYPDSSANWREIYPNGYRPISEGENRDLQLVA----GARGQWGNwDYDASVNYGRNDFT 363
Cdd:pfam00593 15 LTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYdydlGDGLSWLS-TLRLGLRYSSLDGD 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 364 YRLRNSLNASLGP-GSTTRFKTGDFAFAQTVGNFDLTRvldaagaTHTFGTGAEFRREQYRTHAGDPASYAAGPFTDRPT 442
Cdd:pfam00593 94 YTSNSSGLSGAGDyLSDDRLYGLYGLDGDLELSLDLSH-------DLLLGVELRTAGLDYRRLDDDAYDPYDPANPSSSS 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 443 GSqagggltpqdeaDLSRNVASAYANVSSQFGDKFSTDLAGRYEHYQDFG--------------SQWTGKLAARYAFAPA 508
Cdd:pfam00593 167 YS------------DTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGddgngggdnfsrsySAFSPRLGLVYKPTDN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 509 FALRGAISNNVRAPSLSQIGYEAtstgydaagrltqgrllSVNNPIARGLGATDLKPEKSVNYSLGFTSKvGDHFDVSLD 588
Cdd:pfam00593 235 LSLYASYSRGFRAPSLGELYGSG-----------------SGGGGGAVAGGNPDLKPETSDNYELGLKYD-DGRLSLSLA 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 589 FFQIDIDDRIALSEDITGDALTSFVQQNYGvtgvqsasyflnaaDTRTRGAELVANWRQYafgGDLLLTGTYSYAKTELE 668
Cdd:pfam00593 297 LFYIDIKNLITSDPDGPGLGGTVYTYTNVG--------------KARIRGVELELSGRLW---GLGLSGGGYTYTDADDD 359
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 669 NIIATPAQLLalnpeyvlfgveesntltDAAPRTRASLAANW--SNEHWNLQTRVNRYGSATRVFDFGGGFVPRQTYgae 746
Cdd:pfam00593 360 ADADDTGNPL------------------PNVPRHTANLGLTYdfPLGGWGARLGARYVGSGERRYGDAANTFKTPGY--- 418
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 499364077 747 WQLDLEAEYHLGTQWTLAIGGQNILDNYSDRSIDDIAYFGN 787
Cdd:pfam00593 419 TLVDLSAGYRLNKNLTLRLGVNNLFDKYYKRYYSSGGGNLG 459
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
11-811 |
4.03e-30 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 126.97 E-value: 4.03e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 11 MAIAAVLSANAQAQQADAGATTLDTVIVTGTRASDRTVLESTVPVDVLTAEDIRKAGVVNgeLGSALQALlPSFNFprQS 90
Cdd:COG4772 1 MRRALAAALLLAAAAAAEAATTLETVVVTGSRAAEARLKDVPGSVSVVDREELENQAATS--LREVLRRV-PGVNV--QE 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 91 NSGGADHIRAAqLRGLSPD---QVLVLVNGkrrhtsALVNTDSKIGkgttPVDFNSIPINAIKRIEVLRDGAGAQYGSDA 167
Cdd:COG4772 76 EDGFGLRPNIG-IRGLGPRrsrGITLLEDG------IPIAPAPYGD----PAAYYFPDLERMERIEVLRGAAALRYGPQT 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 168 IAGVINVILDDNPER--GELEASFGAYNTdvapidrrvtdgQTSYASAkvgtllgdDGGFFKVGLELknrEATNRAGfdq 245
Cdd:COG4772 145 VGGAINFVTRTIPTAfgGELRVTGGSFGY------------RRTHASV--------GGTVGNFGYLV---EYSRKRG--- 198
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 246 ipsfeeqtpanlalRGQRnyvlGDGATKGLNAWLNSKVPFSANGEFYAFGTYNQRD--TEG----ANYFRYPDSSanwre 319
Cdd:COG4772 199 --------------DGFR----DNSGFDINDFNAKLGYRLSDRQELTLKFQYYDEDanTPGgltdAQFDADPRQS----- 255
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 320 iypngYRPISEGENRDLQLVAGARGQWG-NWDYDASVNYGRNDFTYRLRNSLNASLGPGSTTRFKTGDFafaQTVGNF-D 397
Cdd:COG4772 256 -----YRPADQFDTRRTQLSLRYEHQLSdNTTLTTTAYYNDFSRNWYIRQNTADPNTPGLGLRGNPRGY---RSYGIEpR 327
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 398 LTRVLDAAGATHTFGTGA-----EFRREQYRThagdpasyaagpftdrPTGSQAGGGLTPQDEADLSRNVAsAYANVSSQ 472
Cdd:COG4772 328 LTHRFELGGVPHTLEVGLryhreEEDRKQYVN----------------TYGQGRSGAGLRRDRRFSADALA-AYAQNRFE 390
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 473 FGDKFSTDLAGRYEH----YQDFG--------------SQWTGKLAARYAFAPAFALRGAISNNVRAPSLSQIGYEATst 534
Cdd:COG4772 391 LTGRLTLTPGLRYEHirrdRTDRYstrtggddsgsnsySEFLPGLGLLYQLTDNLQLYANVSRGFEPPTFGDLAYGNG-- 468
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 535 gydaagrltqgrllsvnnpiarglGATDLKPEKSVNYSLGFTSKVGDHFDVSLDFFQIDIDDRIALSEDITGDaltsfvq 614
Cdd:COG4772 469 ------------------------GNPDLKPEKSWNYELGTRGRIGNGLSAEVALFYIDYDNELGSCSAAGGD------- 517
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 615 qnygvtgvqsASYFLNAADTRTRGAELVANWR-QYAFGGDLLLTGTYSYAKTELENiiatpaqllalnpeyvLFGVEESN 693
Cdd:COG4772 518 ----------RSTFTNAGETRHQGLELALDYDlLKGGGLGLPLFAAYTYTDAEFTS----------------DFGPVFAG 571
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 694 TLTDAAPRTRASLAANWSNEHWNLQTRVNRYGS-----ATRVFDFGGGFVPrqtygAEWQLDLEAEYHLGTQWTLAIGGQ 768
Cdd:COG4772 572 NRLPYVPRHQLTAGLGYEHGGWTANLNGRYVSEqftdaANTVADGSFGKIP-----SYTVLDLSASYDFGKNLSLFAGVN 646
|
810 820 830 840
....*....|....*....|....*....|....*....|....*....
gi 499364077 769 NILDNysdrsiddiAYFGNlpydvLSPIGSNGAY------WYGRVRYSF 811
Cdd:COG4772 647 NLFDK---------RYIAS-----RAPNYAAGIRpgpprtVYAGLRLKF 681
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
36-325 |
1.73e-28 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 115.74 E-value: 1.73e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 36 VIVTGTRASdRTVLESTVPVDVLTAEDIRKAGVVNgeLGSALQaLLPSFNFprqSNSGGADHIRAAQLRGLSPDQVLVLV 115
Cdd:COG4206 1 VVVTATRLE-QSKSDLTGSVTVIDAEELERSGATS--LADALR-RVPGVQV---SSSGGPGSAASISIRGLGSNQTLVLI 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 116 NGKRrhtsalVNTDSkigkgTTPVDFNSIPINAIKRIEVLRDGAGAQYGSDAIAGVINVIL--DDNPERGELEASFGAYN 193
Cdd:COG4206 74 DGVP------LNDPS-----LGGVDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTkkGKKGFKGSVSASYGSFG 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 194 TDVAPIDRRVTDGQTSYAsakVGTLLGDDGGFFKVGLELKNREATNRAGFDQIPSFEEQTPANLALRG-----QRNYVLG 268
Cdd:COG4206 143 TRRLSASLSGGAGKFSYS---LSASYRRSDGYRYNDPDLRNNDGYENTSLNARLGYKLGDNGSLSLSGgysdsERGYPGA 219
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 499364077 269 DGATKGLNAWLNSKVPFSANGEFYAFGTYNQRDTEGANYFRYPDSSANWREIYPNGY 325
Cdd:COG4206 220 VGSDRNLRLSLSLEYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGLSY 276
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
1-666 |
2.00e-26 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 115.26 E-value: 2.00e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 1 MTRPTLSVIGMAIAAVLSANAQAQQADAGATTLDTVIVTGTrASDRTVLESTVPVDVLTAEDIRKAGVVNgeLGSALQAL 80
Cdd:PRK13483 1 MKKYLAQVISALCLLPAVFVTHALAQAAPDKTMETVVVTAS-GYEQQIRDAPASISVITREDLENRFYRD--LTDALLDV 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 81 lpsfnfPRQSNSGGADHiRAAQLRGLSPDQVLVLVNGKR---RHTSAlvNTDSK-IGKGTTPvdfnsiPINAIKRIEVLR 156
Cdd:PRK13483 78 ------PGVVVTGGGDR-TDISLRGMGSQYTLILVDGKRqssRETRP--NSDGPgVEQAWTP------PLAAIERIEVIR 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 157 DGAGAQYGSDAIAGVINVILDDNPE--RGELEASfgayntdvAPIDRRVTDGQTSYASAKVGTLLGDDggffKVGLELKN 234
Cdd:PRK13483 143 GPMSSLYGSDAIGGVINIITRKVPNewQGEVRLD--------TTLQENSDSGNVYQANFFVNGPLIKD----LLGLQLYG 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 235 ReaTNRAGFDQIPS-FEEQT----PANLALRGQRNYVL---GDGATKGLNAWLNSKVPFSANGEfyafgtynqrdTEGAN 306
Cdd:PRK13483 211 Q--YTQREEDDIEGgYRDKDarslTAKLALTPNEDHDImleVGTSNQERDSTVGKTVAPLAPGE-----------SCGRR 277
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 307 yfRYPDSSANwreIYPNGYRPISEGenrdlqlvagargqwGNWDYDASVNYGRNDftyrlrnslnaslgpgsTTRFKTGD 386
Cdd:PRK13483 278 --GCPESSTT---EYERSTVSLSHT---------------GRWDFGTSDTYIQHE-----------------EFDNKSRE 320
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 387 FAFAQTVGNFDLTRVLdaaGATHTFGTGAEFRREQyrthagdpasyaagpFTDRpTGSQAgggltpQDEADLSRNVASAY 466
Cdd:PRK13483 321 MKIKNTDFQSSLVAPL---GQEHTLTFGAAYNHQD---------------LTDE-TSNQI------SDLTDISRTQWAVF 375
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 467 ANVSSQFGDKFSTDLAGRYEHYQDFGSQWTGKLAARYAFAPAFALRGAISNNVRAPSLSQI--GYEATSTGYDAAGrltq 544
Cdd:PRK13483 376 SEDEWRIADDFALTGGLRLDHDENFGGHVSPRVYGVWNLAPSWTVKGGVSTGFRAPSLRQTtpDWGQVSRGGNIYG---- 451
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 545 grllsvnNPiarglgatDLKPEKSVNYSLGFTSKVGDHFDVSLDFFQIDIDD---RIALSEDITGDALTSFvqqnyGvtg 621
Cdd:PRK13483 452 -------NP--------DLKPETSLNKELGLYYDLGSGLTASLTVFYNEFKDkitRVACPATQCTDGPNQF-----G--- 508
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 499364077 622 vQSASYFLNAADTRTRGAELVANWRqyaFGGDLLLTGTYSYAKTE 666
Cdd:PRK13483 509 -ADPTTYVNIDEAVTQGVEASLSYP---ITSTLSLSGNYTYTDSE 549
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
6-598 |
9.38e-25 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 110.50 E-value: 9.38e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 6 LSVIGMAIAAVLSANAQAQQADagaTTLDTVIVTgtraSDRTVLEStVPVDVLTAEDIRKAGVVNgELgSALQALLPSFN 85
Cdd:PRK13524 14 LGIYGVAQAAEAEDAKTDDTPA---SHEDTIVVT----AAEQNLQA-PGVSTITAEDIRKRPPAN-DV-SEIIRTMPGVN 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 86 FPRQSNSGGADHIRAAQLRGLSPDQVLVLVNGKRrhtsalVNTDSKI-----GKGTTPVDFNSIPINAIKRIEVLRDGAG 160
Cdd:PRK13524 84 LTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKP------VSSRNSVrygwrGERDTRGDTNWVPPEMIERIEVLRGPAA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 161 AQYGSDAIAGVINVIldDNPERGELEASFGAYNTdvAPIDRrvTDGQTSYASAKVGTLLGDD------GGFFKV---GLE 231
Cdd:PRK13524 158 ARYGNGAAGGVVNII--TKKPTGEWHGSWNTYFN--APEHK--AEGATKRTNFSLSGPLGDElsfrlyGNLNKTqadAWD 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 232 LKNREATNRAGfdqipSFEEQTPA------NLALRGQRNYVLGDGATKGLNAwlnskvPFSANGEFYAFGTYNqrdTEGA 305
Cdd:PRK13524 232 INQGHQSARTG-----SYAGTLPAgregviNKDINGLLRWDFAPLQSLELEA------GYSRQGNLYAGDTQN---TNSD 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 306 NYFR-YPDSSAN--WREIYPNGYRpisegenrdlqlvagargqwGNWDYDAS-VNYGRNDFTyrlRNS-LNASLGPGSTT 380
Cdd:PRK13524 298 ALVKsLYGKETNrmYRQNYALTHR--------------------GGWDNGVStSNYAQYEHT---RNSrLPEGLAGGTEG 354
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 381 RFKTGDFAFAQ-TVGNFDLTRVLD---AAGATHTFGTGAEFRREQYRthagDPASYAAGPFTDRPTGSQAGGGLTPQDEA 456
Cdd:PRK13524 355 IFNEKATQFSTiDLDDVMLHSEVNlpfDLLVNQTLTLGTEWNQQRMK----DPSSNTQALTSGGAIPGVSATGRSPYSKA 430
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 457 DLsrnvASAYANVSSQFGDkfSTDL--AGRYEHYQDFGSQWTGKLAARYAFAPAFALRGAISNNVRAPSLSQI--GYEAT 532
Cdd:PRK13524 431 EI----FSLFAEDNMELTD--STMLtpGLRFDHHSIVGNNWSPSLNLSQGLGDDFTLKMGIARAYKAPNLYQTnpNYILY 504
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 499364077 533 STGYDAAGRLTQGRLLsvnnpiargLGATDLKPEKSVNYSLGFTSKvGDHFDVSLDFFQIDIDDRI 598
Cdd:PRK13524 505 SKGQGCYASAGNGCYL---------QGNDDLKAETSVNKEIGLEFK-RDGWLAGLTWFRNDYRNKI 560
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
12-606 |
1.67e-24 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 109.46 E-value: 1.67e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 12 AIAAVLSANAQAQQADAGATTLDTVIVTGTRASDRTVLESTVPVDVLTAEDIRKAGVVNgELgSALQALLPSFNFPRQSN 91
Cdd:PRK13528 10 WLLTVLLVGLNSPVSAAESSDDDNGETMVVEATAEQELKQQPGVSIITAEDIKKRPPVN-DL-SDIIRKMPGVNLTGNSA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 92 SGGADHIRAAQLRGLSPDQVLVLVNGKRRHTSALVNTdSKIGKGTTPVDFNSIPINAIKRIEVLRDGAGAQYGSDAIAGV 171
Cdd:PRK13528 88 SGTRGNNRQIDIRGMGPENTLILIDGVPVTSRNSVRY-SWRGERDTRGDTNWVPPEMVERIEVIRGPAAARYGSGAAGGV 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 172 INVILDDNPERgeLEASFGAYNTDvaPIDRRvtDGQTSYASAKVGTLLGDDGGFFKVgleLKNREATNRAGFDQIPSFEE 251
Cdd:PRK13528 167 VNIITKRPTND--WHGSLSLYTNQ--PESSK--EGATRRANFSLSGPLAGDALTMRL---YGNLNKTDADSWDINSSAGT 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 252 QTPAnlALRGQRNyvlgdgatKGLNAWLNSKVP----------FSANGEFYAfgtynqRDTEGANyfrypdSSANWREIY 321
Cdd:PRK13528 238 KNAA--GREGVRN--------KDINGVLSWKMTpqqildfeagYSRQGNIYA------GDTQNSN------SSAVTESLA 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 322 PNGYrpisegENRDLQLVAGARGQWGNWDYDAS---VNYGRNDFTyRLRNSLNASL--GPGSTTRFKTGDFAFAQTVGNF 396
Cdd:PRK13528 296 KSGK------ETNRLYRQNYGLTHNGIWDWGQSrlgFYYEKTNNT-RMNEGLAGGGegRITADQTFTTSRLESYRTSGEL 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 397 DLTRVLdaaGATHTFGTGAEFRREQYRthagDPASYAAGpftdrPTGSQAGGglTPQDEADLS-RNVASAYA-----NVS 470
Cdd:PRK13528 369 NVPLNW---LFEQTLTVGAEWNRDELN----DPSSTSLT-----VKDGDIGG--ISGSAADRSsKNKSEISAlyvedNIE 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 471 SQFGDKFSTDLagRYEHYQDFGSQWTGKLAARYAFAPAFALRGAISNNVRAPSLSQigyeaTSTGYDAAGRlTQGRLLSV 550
Cdd:PRK13528 435 PVPGTNLIPGL--RFDYHSEFGSNWSPSLNLSQELGDYFKVKAGIARAFKAPNLYQ-----SSEGYLLYSR-GNGCPKDI 506
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 499364077 551 NNPIARGLGATDLKPEKSVNYSLGFTSKVGDhFDVSLDFFQIDIDDRIALSEDITG 606
Cdd:PRK13528 507 TSGGCYLVGNKNLDPEISVNKEIGLEFTVDD-YHASVTYFRNDYQNKIVAGDDVIG 561
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
9-666 |
5.33e-23 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 104.46 E-value: 5.33e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 9 IGMAIAAVLSANAQAQQADAGATTLDTVIVTGTrASDRTVLESTVPVDVLTAEDIRKAGVVngELGSALQallpsfNFPR 88
Cdd:PRK13513 11 AALVIAAAISSQAYAAEKTNTATPTDTMVVTAS-GFQQRIQDAPASISVVTREQLENKAYR--DVTDALK------DVPG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 89 QSNSGGADHiRAAQLRGLSPDQVLVLVNGKRRHT-SALVNTD-SKIGKGTTPvdfnsiPINAIKRIEVLRDGAGAQYGSD 166
Cdd:PRK13513 82 VVVTGGGST-SDISIRGMAAKYTLILVDGKRVDTrSTRPNSDgSGIEQGWLP------PLAAIERIEVVRGPMSSLYGSD 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 167 AIAGVINVILDDNPE--RGELEASfgayntdvAPIDRRVTDG---QTS-YASAK-VGTLLGddggfFKVGLELKNReatn 239
Cdd:PRK13513 155 AMGGVINIITRKVQKewHGSLRAD--------ATLQEDSKSGdifQTNaYASGPlIDGLLG-----LKVSGLLSHR---- 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 240 raGFDQIPS-FEEQTPANlalrgqrnyvlgdgATKGLNAWLNSKvpfsangefyafgtyNQRDTEGANYFRYPDSSAnwr 318
Cdd:PRK13513 218 --SEDKIIDgYNEQRMRN--------------GTATFSLTPDDN---------------NEFDFEIGRYVQDRNSTP--- 263
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 319 eiypnGYRPISEGENRDLqlvagargqwgnwDYDASvNY-----GRNDF----TYRLRNSLNaslGPGSttrfktgDFAF 389
Cdd:PRK13513 264 -----GRTLALNGTNSDT-------------QYDRN-NYaithnGYYDFgnstSYIQRDETR---NPSR-------QMKS 314
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 390 AQTVGNFDLTRVLDAagatHTFGTGAEFRREQYRThagdpasyaagpftdrpTGSQAGGGltpQDEADLSRNVASAYANV 469
Cdd:PRK13513 315 VDTIFNTQTSFLLDD----HTLSLGGQYRYEELYD-----------------KGNQLPSA---SDLNKLTRWSWALFAED 370
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 470 SSQFGDKFSTDLAGRYEHYQDFGSQWTGKLAARYAFAPAFALRGAISNNVRAPSLSQIGyeatstgyDAAGRLTQGRllS 549
Cdd:PRK13513 371 EWQMTNDFALTGGIRMDQDQNYGTHWTPRLYGVWHLADQWTLKGGVSTGYRSPDLRQAT--------DNWGQLTGGG--G 440
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 550 VNNPIargLGATDLKPEKSVNYSLGFTSKVGDHFDVSLDFFQIDIDDRIA---LSEDITGDALTSFVQQNYGVTgvqsaS 626
Cdd:PRK13513 441 LPALI---LGNSDLKPEKSISQEIGILWDNQENLNASVTLFNTDFKDKITevrNCDTTNTDGQCVFNGINYDFI-----S 512
|
650 660 670 680
....*....|....*....|....*....|....*....|
gi 499364077 627 YFLNAADTRTRGAELVANWRqyaFGGDLLLTGTYSYAKTE 666
Cdd:PRK13513 513 DRINVDKANMRGVEATFNWD---INQAWSLATNYTFTQSE 549
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
33-644 |
1.73e-21 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 99.55 E-value: 1.73e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 33 LDTVIVTGTRaSDRTVLESTVPVDVLTAEDIRKAGVvngelgSALQALLPSFNFPRQSNSGGADHIRAAQLRGLSPDQVL 112
Cdd:TIGR01779 28 LDTVVVTANR-FAQTASQTLAPVTIITRQDIERTQA------KSLPELLRRLPGVSIAQNGGRGQNTSLFLRGTESDHVL 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 113 VLVNGKRRHTSalvntdskiGKGTTpvDFNSIPINAIKRIEVLRDGAGAQYGSDAIAGVINVilddnpergeleasfgay 192
Cdd:TIGR01779 101 VLIDGIRFGSA---------AAGAA--DFQQLPVELVERIEYVRGPRSSLYGSEAIGGVINI------------------ 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 193 ntdvapIDRRVTDGQTSYASAKVGTLLGDDGGFfkvglelknreatnrAGFDQIPSfeeqtpanlalRGQRNYVLGDGAT 272
Cdd:TIGR01779 152 ------ITRRRSGGQGTTLSAGLGSLDYQEYSI---------------ASGVAIGE-----------NGWYSVALGTEST 199
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 273 KGLNAWLnskvpfsangefyAFGTYNQRDTEGanyfrYPDSSANWReiypNGYRpisegENRDLQLVAGARGQWGNWDYD 352
Cdd:TIGR01779 200 KGINVRP-------------GGPGVYDPDRDG-----FRSDSLLLG----GGHR-----FDESWSLFVNALRYENRNDYD 252
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 353 ASVnYGRNDFTYRLRNSLNASLGPGSTTRF----------KTGDFAFAQTVGNFDLT-------------RVLDAAGatH 409
Cdd:TIGR01779 253 NYS-FGTRLYKEAEKGDQSFTGGRQRQSERdvseltlstgKSKDWDYAYSKGRYSSTsdtreqrniqwqnDLLVGDG--W 329
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 410 TFGTGAEFRREQYRTHAGdpasyaagpftdrptgsqagggltpqDEADLSRNVAsAYANVSSQFGDkFSTDLAGRYEHYQ 489
Cdd:TIGR01779 330 VLAGGVDWQKDSIISSTA--------------------------DKEDDRSNTA-AFAQVLQQWGQ-QLLEASLRRDDNQ 381
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 490 DFGSQWTGKLAARYAFAPAFALRGAISNNVRAPSLSQIGYEatstgydaagrltqgrllSVNNPiarglgatDLKPEKSV 569
Cdd:TIGR01779 382 QFGSHTTGSIAWGYQFIEELRFTASYGTAFKAPNLNQLYYP------------------SYGNP--------NLQPETSK 435
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 499364077 570 NYSLGFTSKV-GDHFDVSLdfFQIDIDDRIALSEditgdalTSFVQQNygvtgvqsasyflNAADTRTRGAELVAN 644
Cdd:TIGR01779 436 SAELGFYGLFsGGKWSISG--YRTKINDLIDYDS-------HPKGYPN-------------NIGEARIKGVEATAE 489
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
47-171 |
1.08e-20 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 87.71 E-value: 1.08e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 47 TVLESTVPVDVLTAEDIRKAGVVNgeLGSALQaLLPSFNFPRQSNSGGADhiraAQLRGLSPDQVLVLVNGKRRHTSalv 126
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATN--LADALR-GVPGVSVSSGGGGGGSS----ISIRGFGSNRVLVLVDGVPLNSG--- 70
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 499364077 127 ntdskigkGTTPVDFNSIPINAIKRIEVLRDGAGAQYGSDAIAGV 171
Cdd:pfam07715 71 --------GGGSVDLNSIDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
33-662 |
9.11e-18 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 88.02 E-value: 9.11e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 33 LDTVIVTGTrASDRTVLESTVPVDVLTAEDIRKAGVVNgeLGSALQALlpsfnfPRQSNSGGADHIRAAQLRGLSPDQVL 112
Cdd:PRK10064 30 GETMVVTAS-AVEQNLKDAPASISVITQEDLQRKPVQN--LKDVLKEV------PGVQLTNEGDNRKGVSIRGLDSSYTL 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 113 VLVNGKRrhtsalVNTDSKIGKGTTpVDFNSIPINAIKRIEVLRDGAGAQYGSDAIAGVINVIlddnpERGELEASFGAY 192
Cdd:PRK10064 101 ILIDGKR------VNSRNAVFRHND-FDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNII-----TKKIGQKWHGTV 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 193 NTDVAPIDRRvtDGQTSYasakvgtllgdDGGFFKVG------LELKNREATNRAGFDqipsfEEQTPANlalrgqrnyv 266
Cdd:PRK10064 169 TVDTTIQEHR--DRGDTY-----------NGQFFTSGplidgvLGMKAYGSLAKREKD-----DPQNSTT---------- 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 267 lgdgATKGLNAWLNSKVPFSANGEFYAFGTYNQRDTEGANYFRYPDSSANWReiypngyRPISEGENRDLqlvaGARGQW 346
Cdd:PRK10064 221 ----TDTGETPRIEGFTSRDGNVEFAWTPNQNHDFTAGYGFDRQDRDSDSLD-------KNRLERQNYSL----SHNGRW 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 347 GNWDYDASVnYGRndftyRLRNSlnaslGPGSTTRFKTGDFAFAqtvGNFDLTrvLDAAGATHTFgtGAEFRREQYRtha 426
Cdd:PRK10064 286 DYGNSELKY-YGE-----KVENK-----NPGNSSPITSESNSID---GKYTLP--LTAINQFLTF--GGEWRHDKLS--- 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 427 gDPASYAAGPFTDRPTGSQAgggLTPQDEADLSRNVASAYANvssqfgdkfstdlagRYEHYQDFGSQWTGKLAARYAFA 506
Cdd:PRK10064 345 -DAVNLTGGTSSKTSASQYA---LFVEDEWRIFEPLALTTGV---------------RMDDHETYGDHWSPRAYLVYNAT 405
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 507 PAFALRGAISNNVRAPSLSQIGYEATSTGYDAAGRLtqgrllsvnnpiargLGATDLKPEKSVNYSLG--FTSKVG--DH 582
Cdd:PRK10064 406 DTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGACKI---------------VGSPDLKPETSESWELGlyYMGEEGwlEG 470
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 583 FDVSLDFFQIDIDDRIALSEDITGDALTS---FVQQNYGVTGVQSASY-FLNAADTRTRGAELVAnwrQYAFGGDLLLTG 658
Cdd:PRK10064 471 VESSVTVFRNDVDDRISISRTSDVNAAPGyqnFVGFETNGRGRRVPVFrYYNVNKARIQGVETEL---KIPFNDEWKLSL 547
|
....
gi 499364077 659 TYSY 662
Cdd:PRK10064 548 NYTY 551
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
142-772 |
1.63e-16 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 83.77 E-value: 1.63e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 142 NSIPINAIKRIEVLRDGAGAQYGSDAIAGVINVI----LDDNpeRGELEASFGAYNTdvapidRRVTdgqtsyasAKVGT 217
Cdd:COG4774 74 YRRDTFNLERVEVLKGPASVLYGRGSPGGVINLVtkrpTDEP--FTEVTLTYGSDGQ------RRAT--------LDVNG 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 218 LLGDDGGFFKVGLELKNREATNRAGFDQI---PSFE----EQTPANLALRGQRNYVLGDGatkGLNAWLNSKVPFSANGE 290
Cdd:COG4774 138 PLGDDLAYRLNGMYRDSDSYRDGVDNDRWgiaPSLTwrlgDRTRLTLDYEYQDDDRTPDY---GVPAVANGRPVDVDRST 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 291 FYAF-GTYNQRDTEGANYfrypdsSANWReiypngyrpISEgenrDLQLVAGARGQWGNWDYDASVNYGRNDftyrlrns 369
Cdd:COG4774 215 FYGQpDDYSDSETDSATL------RLEHD---------FND----NWTLRNALRYSDYDRDYRNTYPTGGNA-------- 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 370 lNASLGPGSTTRFKTGDFAFAQTvgnfDLTRVLDAAGATHTFGTGAEFRREQYRTHAGDPASYAAG-----PFTDRPTGS 444
Cdd:COG4774 268 -TGTVTRSAYRRDQDNDTLSNQT----DLTGKFDTGGVKHTLLAGVEYSREDSDNARYSGGGTAPTvnlynPVYGAPVTG 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 445 QAGGGLTPQDEADLsrnvASAYANVSSQFGDKFSTDLAGRYEHY-QDFGSQWTGKLAARY---AFAPAFALRGAISNNVr 520
Cdd:COG4774 343 PTLGGADNDSRTDT----TGLYLQDTISLTDRWSLLAGLRYDRFdTDYTDRTTGATTSSYddsAFSPRAGLVYKPTPNL- 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 521 apSLsqigYEATSTGYDAAGRLTQgrlLSVNNpiarglgaTDLKPEKSVNYSLGFTSKV-GDHFDVSLDFFQIDiddria 599
Cdd:COG4774 418 --SL----YASYSTSFNPGGGAPS---LSNAG--------QALDPEKSRQYEVGVKWDLlDGRLSLTAALFRIE------ 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 600 lseditgdaltsfvQQNYGVTGVQSASYFLNAADTRTRGAELVANWRqyaFGGDLLLTGTYSYAKTELENiiatpaqlla 679
Cdd:COG4774 475 --------------KTNVRTTDPANPGVYVQTGEQRSRGVELEATGE---LTPGWSVLAGYTYLDAEITK---------- 527
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 680 lnpeyVLFGVEESNTLTDaAPRTRASLAANW--SNEHWNLQTRVN----RYGSATRVFDFGGgfvprqtYgaeWQLDLEA 753
Cdd:COG4774 528 -----SANAANVGNRLPN-VPRHSASLWTTYdlPLPGLTLGGGVRyvgsRYADAANTVKLPS-------Y---TRFDAGA 591
|
650
....*....|....*....
gi 499364077 754 EYHLGTQWTLAIGGQNILD 772
Cdd:COG4774 592 SYRLNKNLTLRLNVNNLTD 610
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
3-811 |
1.61e-15 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 80.71 E-value: 1.61e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 3 RPTLSVIGMAIAAVLSANAQAQQADAGATTLDTVIVTGTRA---------------SDRTVLESTVPVDVLTAEDIRKAG 67
Cdd:COG4773 2 AALLAGSGLAAAAAGALAQAAAAAAAEATTLPEVTVTGTAEgtggytakssstatkLDTPLRETPQSVSVVTRQLIEDQG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 68 VVNgeLGSALQaLLPSFNfPRQSNSGGADHIraaQLRGLSPDQVLVlvNGKRRHTSALVNTDskigkgttpvdfnsipIN 147
Cdd:COG4773 82 ATT--LDDALR-NVPGVT-VSSYDGGGRDSF---SIRGFSIDNYLR--DGLPLGGFGGGQPD----------------TA 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 148 AIKRIEVLRDGAGAQYGSDAIAGVINVI----LDDNpeRGELEASFGAYNTdvapidrrvtdgqtSYASAKVGTLLGDDG 223
Cdd:COG4773 137 NLERVEVLKGPAGLLYGAGSPGGLVNLVtkrpTAEP--QGEVSLSAGSWDT--------------YRATADVGGPLNEDG 200
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 224 GFfkvglelknreatnRAGFdqipsfeeqtpaNLALRGQRNYV-LGDGATKGLNAWLNSKVpfSANGEFYAFGTYNQRDT 302
Cdd:COG4773 201 TL--------------RYRL------------NAAYEDGDSFRdGVDNRRTLIAPSLDWDL--TDDTTLTLGAEYQDDDS 252
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 303 EGANYFRYPDSSANWreiYPNGYRPISEGENRDL-QLVAGARGQW---GNWDYDASVNYGRNDFTYR-LRNSLNASLGPG 377
Cdd:COG4773 253 TGDRGFLPLDGTLLD---LPRSTNLGEPWDYYDTeTTTLFAELEHrfnDDWSLRANARYSDSDRDGRsAYAYGAPDAATG 329
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 378 STTR-FKTGDFAFAQTVGNFDLTRVLDAAGATHTFGTGAEFRREQYRThagDPASYAAGPFTDRPTGSQAGGGLTPQDEA 456
Cdd:COG4773 330 TLTRyASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSDS---DSATAGTINIYNPVYGNLPEPDFDASDTD 406
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 457 DLSRNVaSAYANVSSQFGDKFSTDLAGRYEHYQDFGSQWTGKLAARY---AFAPAFALRGAISNNVrAP--SLSQIgYEA 531
Cdd:COG4773 407 TTTRQT-GLYAQDQISLTDRLSLLLGGRYDWYETDSTNRLGGSTTSYddsAFTPRAGLVYDLTPGL-SLyaSYSES-FEP 483
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 532 TStGYDAAGRLtqgrllsvnnpiarglgatdLKPEKSVNYSLGF-TSKVGDHFDVSLDFFQIDiddrialseditgdalt 610
Cdd:COG4773 484 QS-GADNNGNP--------------------LDPETGKQYEAGVkGELFDGRLNATLAVFDIT----------------- 525
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 611 sfvQQNYGVTGVQSASYFLNAADTRTRGAELVANWRqyaFGGDLLLTGTYSYAKTELENIIATpaqllalnpeyvlfgvE 690
Cdd:COG4773 526 ---QKNVATTDPDNPNFYVQVGEVRSRGVELELSGE---LTPGLNLIAGYTYTDAKITKDADA----------------L 583
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 691 ESNTLTdAAPRTRASLAANWS-----NEHWNLQTRVN----RYGSATRVFDFGGgfvprqtYgaeWQLDLEAEYHLGTQW 761
Cdd:COG4773 584 EGKRLT-NVPRHTASLWTTYRfpsgaLKGLGLGGGVRyvgeRYGDAANTFTLPS-------Y---TLVDAGARYDLGKNW 652
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*..
gi 499364077 762 TLAIGGQNILDNYsdrsiddiaYFgnlpydvlSPIGSNGAYWYG-------RVRYSF 811
Cdd:COG4773 653 TLQLNVNNLFDKK---------YY--------ASSGSRGYVYYGaprnvrlSLSYKF 692
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
34-779 |
2.98e-15 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 80.07 E-value: 2.98e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 34 DTVIVTGTrASDRTVLESTVPVDVLTAEDIRKAGVvnGELGSALQALLPSFNFPRQSNSGGADhiraAQLRGLSPDQVLV 113
Cdd:PRK13486 26 DVMIVSAS-GYEKKLTNAAASVSVISQEELQSSQY--HDLAEALRSVEGVDVESGTGKTGGLE----ISIRGMPASYTLI 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 114 LVNGKRRHTSALV--NTDSKIGKGTTPvdfnsiPINAIKRIEVLRDGAGAQYGSDAIAGVINVILDDNpergeleasfga 191
Cdd:PRK13486 99 LIDGVRQGGSSDVtpNGFSAMNTGFMP------PLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKN------------ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 192 yntdvapidrrvTDGQTSYASAKVgtllgddggffkvglelkNREATNRAGFDQIPSFEEQTP-----ANLALRGQRNYV 266
Cdd:PRK13486 161 ------------ADKWLSSVNAGL------------------NLQESNKWGNSSQFNFWSSGPlvddsVSLQVRGSTQQR 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 267 LGDGATKgLNAWLNSKVPFSANGEFYAFGT-YNQRDTEGANYFRYPDSSanwREIYpngyrpisegENRDLQLVAGARGq 345
Cdd:PRK13486 211 QGSSVTS-LSDTAATRIPYPTESQNYNLGArLDWKASEQDVLWFDMDTT---RQRY----------DNRDGQLGSLTGG- 275
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 346 wgnwdYDASVNYGRND--------FTY-RLRNSLN--------ASLGPGSTTRFKTGDFAFAQTVGNFDL---TRVLDAA 405
Cdd:PRK13486 276 -----YDRTLRYERNKisagydhtFTFgTWKSYLNwnetenkgRELVRSVLKRDKWGLAGQPRELKESNLilnSLLLTPL 350
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 406 GATHTFGTGAEFRreqyrthagdpasyaagpftdrpTGSQAGGGLTPQDEADLSRNVASAYANVSSQFGDKFSTDLAGRY 485
Cdd:PRK13486 351 GESHLVTVGGEFQ-----------------------SSSMKDGVVLASTGETFRQKSWSVFAEDEWHLTDALALTAGSRY 407
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 486 EHYQDFGSQWTGKLAARYAFAPAFALRGAISNNVRAPSLSQIgYEATStgydaaGRLTQGRLLSVNNPiarglgatDLKP 565
Cdd:PRK13486 408 EHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQL-HKGIS------GVSGQGKTNLLGNP--------DLKP 472
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 566 EKSVNYSLGFTSKVGDHFDVSLDFFQIDIDDRIAlseditgdaltsfvqqNYGVTgvQSASYFLNAADTRTRGAELVANW 645
Cdd:PRK13486 473 EESVSYEAGVYYDNPAGLNANVTGFMTDFSNKIV----------------SYSIN--DNTNSYVNSGKARLHGVEFAGTL 534
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 646 RQYAfgGDLLLTGTYSYAKTELENIIATPAQlLALNPEYVLFG------VEESNTLTDAAPRTRASLAAnwsnehwnlQT 719
Cdd:PRK13486 535 PLWS--EDVTLSLNYTWTRSEQRDGDNKGAP-LSYTPEHMVNAklnwqiTEEVASWLGARYRGKTPRFT---------QN 602
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 499364077 720 RVNRYGSATRVFDFGGGFVPRQTYgaewqLDLEAEYHLGTQWTLAIGGQNILD-NYSDRSI 779
Cdd:PRK13486 603 YSSLSAVQKKVYDEKGEYLKAWTV-----VDAGLSWKMTDALTLNAAVNNLLNkDYSDVSL 658
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
34-628 |
4.35e-15 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 79.28 E-value: 4.35e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 34 DTVIVTgtrASDRTVLESTVP--VDVLTAEDIRKAGVvnGELGSALQALlpsfnfPRQSNSGGADHiRAAQLRGLSPDQV 111
Cdd:PRK13484 31 DTLVVT---ASGFTQQLRNAPasVSVITSEQLQKKPV--SDLVDAVKDV------EGISITGGNEK-PDISIRGLSGDYT 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 112 LVLVNGKRRHT-SALVNTDSKIGKGTTPvdfnsiPINAIKRIEVLRDGAGAQYGSDAIAGVINVIlddnpergeleasfg 190
Cdd:PRK13484 99 LILVDGRRQSGrESRPNGSGGFEAGFIP------PVEAIERIEVIRGPMSSLYGSDAIGGVINII--------------- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 191 ayntdVAPIDRRVTDGQTSyasakVGTLLGDDGGFfkvglelknREATNRAGFDQIPSFEEQTpaNLALRGQRNYVLGDG 270
Cdd:PRK13484 158 -----TKPVNNQTWDGVLG-----LGGIIQEHGKF---------GNSTTNDFYLSGPLIKDKL--GLQLYGGMNYRKEDS 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 271 ATKGLNAWLNSKV-------PFSANGEFYAFGTYNQRDTEGANyfrypDSSANWRE----IYPNGYRpisEGENRDLQLV 339
Cdd:PRK13484 217 ISQGTPAKDNKNItatlqftPTESQKFVFEYGKNNQVHTLTPG-----ESLDAWTMrgnlKQPNSKR---ETHNSRSHWV 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 340 AGARGQWGNWDYDASVnygRNDFTYRLRNSLNASLGPGSTTRFKTGDFAFAQTVGNFDLTRVLdaagATHTFGTGAEFRR 419
Cdd:PRK13484 289 AAWNAQGEILHPEIAV---YQEKVIREVKSGKKDKYNHWDLNYESRKPEITNTIIDAKVTAFL----PENVLTIGGQFQH 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 420 EQYRTHagdpaSYAAGPFTDRPTGSQAGGGLTPQDEADLSRNVAsayanvssqfgdkfstdLAG--RYEHYQDFGSQWTG 497
Cdd:PRK13484 362 AELRDD-----SATGKKTTETQSVSIKQKAVFIENEYAATDSLA-----------------LTGglRLDNHEIYGSYWNP 419
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 498 KLAARYAFAPAFALRGAISNNVRAPSLSQIgyeatSTGYdaaGRLTQ-GRLLSVNNpiarglgaTDLKPEKSVNYSLGFT 576
Cdd:PRK13484 420 RLYAVYNLTDNLTLKGGIAKAFRAPSIREV-----SPGF---GTLTQgGASIMYGN--------RDLKPETSVTEEIGII 483
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 577 SKVGDHFDVSLDFFQIDIDDR-----IALSEDITGdaLTSFVQQNYG---VTGVQSASYF 628
Cdd:PRK13484 484 YSNDSGFSASATLFNTDFKNKltsydIGTKDPVTG--LNTFIYDNVGeanIRGVELATQI 541
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
33-772 |
4.33e-13 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 73.14 E-value: 4.33e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 33 LDTVIVTGTRASDRTVLE----STVPVDVLTAEDIRKAGVVNgeLGSALQaLLPSFNFPRQSNSGgadhiRAAQLRGLSP 108
Cdd:TIGR01782 1 LDAVQVTGQRASLEKAIDakrdADSVVDVISAEDIGKLPDVN--VAEALQ-RVPGVSIERDQGEG-----RYVSVRGLGP 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 109 DQVLVLVNGKRrhtsaLVNTDSkigkGTTPVDFNSIPINAIKRIEVlRDGAGAQYGSDAIAGVINVI------LDDNPER 182
Cdd:TIGR01782 73 SYNRTTLNGRT-----IASTDS----GGRAFSLDLLPSELVSGVEV-YKTPTADMDEGGIGGTVDLRtrspfdYDGRTLS 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 183 GELEASfgaYNTDVapiDRRVTDGQTSYASAKVgtllgDDGGFFKVGLELKNREATNRAGFDQIPSFEEQTPA------N 256
Cdd:TIGR01782 143 GSAQGG---YNDLA---GKDKPGPRGAASYSWT-----FGDGQFGVLLSASYQKRDFAEDNVETENWGTYTSAdggaqgL 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 257 LALRGQRNYV-LGDGATKGLNAWLNSKvpFSANGEFYAFGTYNQRD-TEGANYFRYPDSSANWREIYPNGYRP---ISEG 331
Cdd:TIGR01782 212 YFPRGVRYRSyRNDRERKGVNGSLQWR--PSDALELYLDTLYSKYDdDETRQQIEFRTLNGGSTVITSNQTATsgaLVQG 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 332 ENRDLQ----------------LVAGARGQWGNWDYDASVNYGRND-----------------FTYRLRNSLNASLG-PG 377
Cdd:TIGR01782 290 TVANLQilvearyneeketttsLTLGGEWTGDRWTLDGDLGYSKATrdrpdrvtrfftaptpgYDFDYRGGPTLTLGtPA 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 378 STTR----FKTGDFAFAQTV------------GNFDLTRvlDAAGATHTFG---TGAEFRREQYRT-------------- 424
Cdd:TIGR01782 370 DGDDasnyTNPANGELRRTQisyqkaedsedaAQLDATF--DGPFTSLKFGvryRRRDKTNRGSRYrrsiigatgasgla 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 425 -----HAGDPASYAAGPFTDR-------------PTGSQAGGGLTPQDEADLSRNV----ASAYANVSSQFGDKFSTDLA 482
Cdd:TIGR01782 448 gvpsdLAGAGLDGGLGGPLTGwdpadldaflnaaRGDAAGGGTYTYASTAPNTYTVtedtTAAYAMANFDTGLRLRGNVG 527
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 483 GRYEHYQDFGSQW---TGKLAARYAFAPAFA----------------------LRGAISNNVRAPSLSQIGYEATSTGYD 537
Cdd:TIGR01782 528 VRYERTDQTSDGWqsqPAANGTGSVLVPVSAdrdytdvlpslnlaydltddlvLRFAASKTITRPDFGDLAANTSLSDDG 607
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 538 AAGRLTqgrlLSVNNPiarglgatDLKPEKSVNYSLGFTSKVGDHFDVSLDFFQIDIDDRIALSEDITGDALTSfvqqnY 617
Cdd:TIGR01782 608 TGGTVT----VSGGNP--------DLKPYESDNLDLSLEWYFGPGGLLSAAVFYKDIKNFIVTTTSTETNDGGG-----G 670
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 618 GVTGVQSASYFLNAADTRT-RGAELvaNWRQ-----YAFGGDLLLTGTYSYAKTELENIIATPAQLLAlnpeyVLFGVEE 691
Cdd:TIGR01782 671 LVVAGVLVSRPVNGGKAGKiRGVEL--GYQQtfdflPGPLSGFGVQANYTYVDSEADPSVDGVQRRKL-----PLPGLSK 743
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 692 SN---TLTDAAPRTRASLAANWSNEhwnlqtrvnrygsatRVFDFGGGFVPRQTY--GAEWQLDLEAEYHLGTQWTLAIG 766
Cdd:TIGR01782 744 NTanaTLYYEKGGFSARLSYNYRSD---------------YLLDVGGSNINRLDRyvDPRGQLDLSASYQVSDHLSLGLQ 808
|
....*.
gi 499364077 767 GQNILD 772
Cdd:TIGR01782 809 ASNLTN 814
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
55-772 |
5.45e-13 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 72.45 E-value: 5.45e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 55 VDVLTAEDIRKAGVvnGELGSALQALLPSFNfprQSNSGGADH----IRAAQLRGLSPDqvlVLVNGKRrhtsalvntds 130
Cdd:TIGR01783 6 VSVITRQELEDQQA--GSLSEALQRVPGVVV---GGSGGTTQFgnitIRGFGLEVDIDN---VYLDGVP----------- 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 131 kigkGTTPVDFNSIPINAIKRIEVLRDGAGAQYGSDAIAGVINVILDDNPERGELEASFGAyntdvapidrrVTDGQtSY 210
Cdd:TIGR01783 67 ----LLSRGNLAIVDPAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGA-----------GTRSG-YR 130
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 211 ASAKVGTLLGDDGGFfkvGLELknreatnragfdqipsfeeqtpaNLALRGQRNYVlgDGATKGLNawLNSKVPFSANGE 290
Cdd:TIGR01783 131 TAFDLGGPLGADGTF---RGRL-----------------------NGARQDGDSFY--DGAGEETR--LGATATDWQLDD 180
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 291 --FYAFGTYNQRDTEGANYFRYPdssaNWREIYPNGY---RPISEGENRDL----QLVAGARGQW---GNWDYDASVNYG 358
Cdd:TIGR01783 181 rtLLRLGAYYQKERDRGGYGGLP----ASGGTSGRDLssdRYLGTSSNRNYddreYLSYGLSLEYqfnDVWTGKQNLRYS 256
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 359 RNDFTyrlRNSLNASLGPGSTTRFKTGDFAFAQTVGNFDLTRVLDA----AGATHTFGTGAEFRReqyRTHAGDPASYAA 434
Cdd:TIGR01783 257 YFDTD---SNQVQASGYSSDGGLFGRSLTVVNVKQDRVQIDAGLDGefetGPIEHDLLLGVSYGQ---RTTNRFNNTGYP 330
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 435 GPFTDRPTG---SQAGGGLTPQDEADLSRNVA-SAYANVSSQFGDKFSTDLAGRYEHYQdfgsqwtgklaaRYAFAPAFA 510
Cdd:TIGR01783 331 SDNIYSLTAtssARTDIGDSPKDRALSSTTKAlNGVALQRILLADKWTLTLGGRYDSVD------------VKSNNGVAG 398
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 511 LRGAISNNVRAPSLSqIGYEATS--TGYDAAGRLTQGRLLsvnNPIARGLGATDLKPEKSVNYSLGFTSKVGDHFDVSLD 588
Cdd:TIGR01783 399 STGKRDDSQFTPSLG-VAYKPTDdwSLYASYAESFKPGGY---YPKGAGNSGDILEPEKGKNYELGVRYDLGDSLLATAA 474
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 589 FFQIDIDDRIalseditgdaltsfvqQNYGVTGVQSAsyflNAADTRTRGAELVANWRqYAFGGDLLLTGTYSYAKTELE 668
Cdd:TIGR01783 475 LFRITKDNQL----------------VQDPVNGTFSV----NAGKTRNRGVELEARGY-LTPGLSLSAGYTYTDAEFTED 533
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 669 NIIATPAQLLALnpeyvlfgveesntltdaAPRTRASLAANWSNEHWNLQTRVNRYGSATRVFDFGGGFVPRQtyGAEWQ 748
Cdd:TIGR01783 534 TNGDTQGNTVPF------------------VPKHTASLWASYAPPVGDNGLTLGGGVQYTGKAYVDGGNTGKV--PSYTV 593
|
730 740
....*....|....*....|....*.
gi 499364077 749 LDLEAEYHLGTQ--WTLAIGGQNILD 772
Cdd:TIGR01783 594 VDLSVRYDLTKKknLTLALNVNNLFD 619
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
34-599 |
4.44e-11 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 66.17 E-value: 4.44e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 34 DTVIVTGTRASD--RTVLestVPVDVLTAEDIRK--AGVVNGELGSalqalLPSFNFprqSNSGGADHIRAAQLRGLSPD 109
Cdd:PRK10641 26 DTLVVTANRFQQpvSTVL---APTTVVTRDDIDRwqSKSVNDVLRR-----LPGVDI---AQNGGLGQLSSLFIRGTNSS 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 110 QVLVLVNGKRRHTSALVNTdskigkgttpVDFNSIPINAIKRIEVLRDGAGAQYGSDAIAGVINVILDDNPERGELEASF 189
Cdd:PRK10641 95 HVLVLIDGVRLNQAGISGS----------ADLSQIPISLVQRIEYIRGPRSAVYGSDAIGGVVNIITTRDKPGTTLSAGW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 190 GA--YNTDVAPIDRRVTDgqtsyasAKVGTLLGddggffkvglelkNREATNraGFDQIPSFEEQTPANLALRGQRNYVL 267
Cdd:PRK10641 165 GSngYQNYDGSTQQQLGD-------NTRVTLAG-------------DYTYTK--GFDVVAYGNTGTQAQPDRDGFMSKTL 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 268 gdgatkglnaWLNSKVPFSAN--GEFYAFGTYNQRDTEGanYFRYPDSSANWREIYPNGYRpisegenrdlqlvAGARGQ 345
Cdd:PRK10641 223 ----------WGGLEHQFNDQwsGFVRGYGYDNRTDYDA--YYSPGSPLIDTRQLYSQSWD-------------AGLRYN 277
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 346 WGNW------------DYDASVNYGRNDFTYRLRNSLNASLGPGSTTRFKTGdfafaqtvgnfdltrvldaagathTFGT 413
Cdd:PRK10641 278 GGIYssqliasyshskDYNYDPHYGRYDSSATLDDMKQYNVQWGNTVQVGHG------------------------NISA 333
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 414 GAEFRREqyRTHAGDpaSYAAGPFTDRPTGsqagggltpqdeadlsrnvasAYANVSSQFGDkFSTDLAGRYEHYQDFGS 493
Cdd:PRK10641 334 GVDWQKQ--TTTPGT--GYVPDGYDQRNTG---------------------IYLTGQQQIGD-VTLEGAARSDDNSQFGW 387
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 494 QWTGKLAARYAFAPAFALRGAISNNVRAPSLSQIgyeatstgYDAAGrltqgrllsvnNPiarglgatDLKPEKSVNYSL 573
Cdd:PRK10641 388 HGTWQTSAGWEFIDGYRFIASYGTAFKAPNLGQL--------YGFYG-----------NP--------NLKPEESKQWEG 440
|
570 580
....*....|....*....|....*.
gi 499364077 574 GFTSKVGDhFDVSLDFFQIDIDDRIA 599
Cdd:PRK10641 441 GFEGLTGP-VNWRLSGYRNDIDNLID 465
|
|
| OMP_RagA_SusC |
TIGR04056 |
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade ... |
32-670 |
5.49e-11 |
|
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 274948 [Multi-domain] Cd Length: 981 Bit Score: 66.46 E-value: 5.49e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 32 TLDTVIVTGT-RASDRTVLESTVPVDvltAEDIRKAGVVNgeLGSALQALLPSFNFprQSNSG--GAD---HIRaaQLRG 105
Cdd:TIGR04056 77 ELDEVVVVGYgTQKKKSLTGAVSTVK---AKELKKVPVSN--LSNALQGKVAGVII--TQSSGepGGDaeiWIR--GISS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 106 LSPD-QVLVLVNGkrrhtsalVNTDSkigkgttpvDFNSIPINAIKRIEVLRDG-AGAQYGSDAIAGVInVILDDNPERG 183
Cdd:TIGR04056 148 FGGNnSPLYVIDG--------VPRDN---------GLSDLNPEDIESISVLKDAsATAIYGSRGANGVI-LITTKRGKEG 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 184 ELEASFGAYNTDVAPIdrRVTDGQTSYASAKV---GTLLGDDGGFFKVGLELKNREATNRAG--------FDQIpsFEEQ 252
Cdd:TIGR04056 210 KPKISYNAEFGFSTPT--RLPEMLNAYEYAELyneALLNRGSSPPDIYTDEEIEAYRNGLDPdlypntdwQDEI--FKRT 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 253 TP---ANLALRG--QRN-------YVLGDGATKG---------------LNAWLNSKVPFSangefYAFGTYNQRDTEGA 305
Cdd:TIGR04056 286 AFnqrHNLSVSGgtEKAryyvslgYYNEEGILKNsdykrynfranidakLTKTLKLSLNVS-----GSLSKYNNPGGSTS 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 306 NYF----------------RYPD----SSANWREIYPNGYRPISEGENRD----LQLVAGARGQWGNW-DYDASVNYGRN 360
Cdd:TIGR04056 361 NIWgalmlfprgtpystppVYSDgyypAYNSGNTSLQNPYALLNRGYNENernrLNGNASLEQKITKGlKLKGTFSYDYS 440
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 361 DFTYRLRNSlnaslGPGSTTRFKTGDFAFAQTVGNFDLTRVLDAAGA-THTFG---TGAEFRREQYRTHagdpASYAAGP 436
Cdd:TIGR04056 441 NYKNKKYYK-----NPYYYNATGGANNGYYSESNSRSRNYYLEATLNyNRTFGkhnVSALLGYSQQENK----SSSYGGL 511
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 437 FTDRPTGSQAGGGLTPQDEADLSRNVA-SAYANVSsqFGDKFSTDLAGRYEhyqdfgsqWTGKLAA--RYAFAPAFALRG 513
Cdd:TIGR04056 512 LDDLPSLDAGTSDASVSGSDSEYRLQSlFGRATYS--YKDRYLLEFNFRYD--------GSSRFAKgnRWGFFPSVSLGW 581
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 514 AISN--------------NVRApSLSQIGYEATSTGYDAAGRLTQGR----LLSVNNPIARG-----LGATDLKPEKSVN 570
Cdd:TIGR04056 582 RISEekfmkklkkwlsflKLRA-SYGIVGNDNIGDRYPYLSLYNLGDggynFGTNNGTSVTGitesrYGNPNLKWEKTKK 660
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499364077 571 YSLGFTSKVGDH-FDVSLDFFQidiDDRialsEDITGDALTSfvqqnyGVTGVQsaSYFLNAADTRTRGAELVANWRQYa 649
Cdd:TIGR04056 661 WNLGLDLGFFNNrLSLTVDYYY---KKT----KDILQSRSLP------SVTGYS--SPYANIGKVKNKGVELSLNYRNK- 724
|
730 740
....*....|....*....|...
gi 499364077 650 FGGDLLLT--GTYSYAKTELENI 670
Cdd:TIGR04056 725 IGKDFSWSvrGNFTYNKNKILEL 747
|
|
| |
