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Conserved domains on  [gi|499418776|ref|WP_011106240|]
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MULTISPECIES: flagellar basal body L-ring protein FlgH [Vibrio]

Protein Classification

flagellar basal body L-ring protein FlgH( domain architecture ID 139856)

flagellar basal body L-ring protein FlgH assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

Gene Ontology:  GO:0003774|GO:0009427|GO:0071973

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
FlgH super family cl19182
Flagellar L-ring protein;
8-222 2.36e-104

Flagellar L-ring protein;


The actual alignment was detected with superfamily member PRK12407:

Pssm-ID: 450263  Cd Length: 221  Bit Score: 300.24  E-value: 2.36e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776   8 WAVAVVLLV-GCAGRQEFIPPqpNAEEYAPPK-LDYTLPDAQSGSLYRHQYTMTLFQDRRAYRVGDVLTVVLSEETSSSK 85
Cdd:PRK12407   6 ILTALLLALcGCESPALLVQK--DDAEFAPPAnLIQPATVTEGGGLFQPGYNWSLLQDRRAYRVGDILTVILDESTQSSK 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776  86 KAGTKFGKSSAVNFAAPTIGTKKFDELGVSIDGSRNFDGSASSSQGNKLQGAITVTVHDVLPNGVLRISGEKWLRLNQGD 165
Cdd:PRK12407  84 QAKTNFGKKNDVSLGVPEVLGKKLDKLGGSISGKRDFDGSATSAQQNMLRGSITVAVHQVLPNGVLVIRGEKWLTLNQGD 163

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 499418776 166 EFIRLTGIVRVDDITRNNQVSSQRIADARITYAGRGALADSNAAGWLTQFFNSPWVP 222
Cdd:PRK12407 164 EYMRVTGLVRADDIARDNSVSSQRIANARISYAGRGALSDANSAGWLTRFFNHPLFP 220
 
Name Accession Description Interval E-value
flgH PRK12407
flagellar basal body L-ring protein FlgH;
8-222 2.36e-104

flagellar basal body L-ring protein FlgH;


Pssm-ID: 183507  Cd Length: 221  Bit Score: 300.24  E-value: 2.36e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776   8 WAVAVVLLV-GCAGRQEFIPPqpNAEEYAPPK-LDYTLPDAQSGSLYRHQYTMTLFQDRRAYRVGDVLTVVLSEETSSSK 85
Cdd:PRK12407   6 ILTALLLALcGCESPALLVQK--DDAEFAPPAnLIQPATVTEGGGLFQPGYNWSLLQDRRAYRVGDILTVILDESTQSSK 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776  86 KAGTKFGKSSAVNFAAPTIGTKKFDELGVSIDGSRNFDGSASSSQGNKLQGAITVTVHDVLPNGVLRISGEKWLRLNQGD 165
Cdd:PRK12407  84 QAKTNFGKKNDVSLGVPEVLGKKLDKLGGSISGKRDFDGSATSAQQNMLRGSITVAVHQVLPNGVLVIRGEKWLTLNQGD 163

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 499418776 166 EFIRLTGIVRVDDITRNNQVSSQRIADARITYAGRGALADSNAAGWLTQFFNSPWVP 222
Cdd:PRK12407 164 EYMRVTGLVRADDIARDNSVSSQRIANARISYAGRGALSDANSAGWLTRFFNHPLFP 220
FlgH COG2063
Flagellar basal body L-ring protein FlgH [Cell motility];
8-220 2.00e-96

Flagellar basal body L-ring protein FlgH [Cell motility];


Pssm-ID: 441666  Cd Length: 218  Bit Score: 280.13  E-value: 2.00e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776   8 WAVAVVLLVGCAGRQEfiPPQPNAEEYAPPKLDYTLPDAQS-GSLYRHQYTMTLFQDRRAYRVGDVLTVVLSEETSSSKK 86
Cdd:COG2063    2 LLLLALLLAGCASVPP--EPVVDDPAYAPVMPAPPPAAPPAnGSLFQAGGSRPLFEDRRARRVGDILTVVIVENTSASKS 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776  87 AGTKFGKSSAVNFAAPTI-----GTKKFDELGVSIDGSRNFDGSASSSQGNKLQGAITVTVHDVLPNGVLRISGEKWLRL 161
Cdd:COG2063   80 ASTSRSRSSSVSLGIPTLfglpgSLLGGPNLSVSASSSSSFKGKGSASRSNSLTGTITATVVEVLPNGNLVVRGEKEVRV 159

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 499418776 162 NQGDEFIRLTGIVRVDDITRNNQVSSQRIADARITYAGRGALADSNAAGWLTQFFNSPW 220
Cdd:COG2063  160 NQGLEYIRLSGIVRPEDISPDNTVSSTKIADARIEYGGRGALADAQQPGWLQRFFDSVL 218
FlgH pfam02107
Flagellar L-ring protein;
46-220 2.39e-79

Flagellar L-ring protein;


Pssm-ID: 426604  Cd Length: 175  Bit Score: 235.10  E-value: 2.39e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776   46 AQSGSLYRHQYTMTLFQDRRAYRVGDVLTVVLSEETSSSKKAGTKFGKSSAVNFAAPtiGTKKFDELGVSIDGSRNFDGS 125
Cdd:pfam02107   2 PANGSLWQAGSARPLFEDRRARRVGDILTVVIVENTSASKSASTNTSRSSSANAGAG--LGGLDLSASLGASSSSSFKGK 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776  126 ASSSQGNKLQGAITVTVHDVLPNGVLRISGEKWLRLNQGDEFIRLTGIVRVDDITRNNQVSSQRIADARITYAGRGALAD 205
Cdd:pfam02107  80 GSTSRSNSLTGTITATVVEVLPNGNLVIEGEKEVRVNQETEYIRLSGIVRPEDISADNTVSSTRIADARIEYGGRGVLAD 159

                         170
                  ....*....|....*
gi 499418776  206 SNAAGWLTQFFNSPW 220
Cdd:pfam02107 160 AQQPGWLTRFFDSIW 174
 
Name Accession Description Interval E-value
flgH PRK12407
flagellar basal body L-ring protein FlgH;
8-222 2.36e-104

flagellar basal body L-ring protein FlgH;


Pssm-ID: 183507  Cd Length: 221  Bit Score: 300.24  E-value: 2.36e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776   8 WAVAVVLLV-GCAGRQEFIPPqpNAEEYAPPK-LDYTLPDAQSGSLYRHQYTMTLFQDRRAYRVGDVLTVVLSEETSSSK 85
Cdd:PRK12407   6 ILTALLLALcGCESPALLVQK--DDAEFAPPAnLIQPATVTEGGGLFQPGYNWSLLQDRRAYRVGDILTVILDESTQSSK 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776  86 KAGTKFGKSSAVNFAAPTIGTKKFDELGVSIDGSRNFDGSASSSQGNKLQGAITVTVHDVLPNGVLRISGEKWLRLNQGD 165
Cdd:PRK12407  84 QAKTNFGKKNDVSLGVPEVLGKKLDKLGGSISGKRDFDGSATSAQQNMLRGSITVAVHQVLPNGVLVIRGEKWLTLNQGD 163

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 499418776 166 EFIRLTGIVRVDDITRNNQVSSQRIADARITYAGRGALADSNAAGWLTQFFNSPWVP 222
Cdd:PRK12407 164 EYMRVTGLVRADDIARDNSVSSQRIANARISYAGRGALSDANSAGWLTRFFNHPLFP 220
FlgH COG2063
Flagellar basal body L-ring protein FlgH [Cell motility];
8-220 2.00e-96

Flagellar basal body L-ring protein FlgH [Cell motility];


Pssm-ID: 441666  Cd Length: 218  Bit Score: 280.13  E-value: 2.00e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776   8 WAVAVVLLVGCAGRQEfiPPQPNAEEYAPPKLDYTLPDAQS-GSLYRHQYTMTLFQDRRAYRVGDVLTVVLSEETSSSKK 86
Cdd:COG2063    2 LLLLALLLAGCASVPP--EPVVDDPAYAPVMPAPPPAAPPAnGSLFQAGGSRPLFEDRRARRVGDILTVVIVENTSASKS 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776  87 AGTKFGKSSAVNFAAPTI-----GTKKFDELGVSIDGSRNFDGSASSSQGNKLQGAITVTVHDVLPNGVLRISGEKWLRL 161
Cdd:COG2063   80 ASTSRSRSSSVSLGIPTLfglpgSLLGGPNLSVSASSSSSFKGKGSASRSNSLTGTITATVVEVLPNGNLVVRGEKEVRV 159

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 499418776 162 NQGDEFIRLTGIVRVDDITRNNQVSSQRIADARITYAGRGALADSNAAGWLTQFFNSPW 220
Cdd:COG2063  160 NQGLEYIRLSGIVRPEDISPDNTVSSTKIADARIEYGGRGALADAQQPGWLQRFFDSVL 218
flgH PRK00249
flagellar basal body L-ring protein FlgH;
9-223 4.40e-91

flagellar basal body L-ring protein FlgH;


Pssm-ID: 234700  Cd Length: 222  Bit Score: 266.72  E-value: 4.40e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776   9 AVAVVLLVGCAgRQEFIPPQPNAEEYAPPKLDYTLPDA-------QSGSLYRHQYTmTLFQDRRAYRVGDVLTVVLSEET 81
Cdd:PRK00249   1 LLLLLLLAGCA-SIPRLPLVGGAPAAAPVEAPTPLPNPapngsifQAGSLWNYGYQ-PLFKDRRARNVGDILTVVLQENT 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776  82 SSSKKAGTKFGKSSAVNFAAPTIGTKKFD---ELGVSIDGSRNFDGSASSSQGNKLQGAITVTVHDVLPNGVLRISGEKW 158
Cdd:PRK00249  79 SASKSNSTNRSRDSSTNFGLPSLFGYLNGldaNASLETSSDNSFKGKGSASRSNTLTGTITVTVTQVLPNGNLVIRGEKE 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 499418776 159 LRLNQGDEFIRLTGIVRVDDITRNNQVSSQRIADARITYAGRGALADSNAAGWLTQFFNSpWVPF 223
Cdd:PRK00249 159 VRVNQGTEFLRVSGVVRPRDISGDNTISSTRIADARISYGGRGYISDAQQPGWLQRFFDS-LSPF 222
flgH PRK12698
flagellar basal body L-ring protein FlgH;
8-223 6.84e-81

flagellar basal body L-ring protein FlgH;


Pssm-ID: 183690  Cd Length: 224  Bit Score: 241.17  E-value: 6.84e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776   8 WAVAVVLLVGCAGRQEfiPPQPNAEEYAP--PKLDYTlPDAQSGSLYRHQYTMTLFQDRRAYRVGDVLTVVLSEETSSSK 85
Cdd:PRK12698   6 LLALALLLSGCSSTPE--KPIADDPYYAPvyPEAPPT-KIAATGSIFQDSQANSLYSDIKAHKVGDIITVVLKESTQAKK 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776  86 KAGTKFGKSSAVNFAAPTIGTKKFDELGVSID----GSRNFDGSASSSQGNKLQGAITVTVHDVLPNGVLRISGEKWLRL 161
Cdd:PRK12698  83 SANNEIKKGSDLSLDPIYAGGGNVSIGGVPLDlgykDSMNTKRESDADQSNSLSGSISANVMQVLPNGNLVIRGEKWISI 162

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 499418776 162 NQGDEFIRLTGIVRVDDITRNNQVSSQRIADARITYAGRGALADSNAAGWLTQFFNSPWVPF 223
Cdd:PRK12698 163 NNGDEFIRLTGIVRSQDITPDNTIDSTRVANARIQYSGTGTFADAQKVGWLSQFFMSDWWPF 224
FlgH pfam02107
Flagellar L-ring protein;
46-220 2.39e-79

Flagellar L-ring protein;


Pssm-ID: 426604  Cd Length: 175  Bit Score: 235.10  E-value: 2.39e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776   46 AQSGSLYRHQYTMTLFQDRRAYRVGDVLTVVLSEETSSSKKAGTKFGKSSAVNFAAPtiGTKKFDELGVSIDGSRNFDGS 125
Cdd:pfam02107   2 PANGSLWQAGSARPLFEDRRARRVGDILTVVIVENTSASKSASTNTSRSSSANAGAG--LGGLDLSASLGASSSSSFKGK 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776  126 ASSSQGNKLQGAITVTVHDVLPNGVLRISGEKWLRLNQGDEFIRLTGIVRVDDITRNNQVSSQRIADARITYAGRGALAD 205
Cdd:pfam02107  80 GSTSRSNSLTGTITATVVEVLPNGNLVIEGEKEVRVNQETEYIRLSGIVRPEDISADNTVSSTRIADARIEYGGRGVLAD 159

                         170
                  ....*....|....*
gi 499418776  206 SNAAGWLTQFFNSPW 220
Cdd:pfam02107 160 AQQPGWLTRFFDSIW 174
flgH PRK12699
flagellar basal body L-ring protein; Reviewed
 10-216 5.41e-49

flagellar basal body L-ring protein; Reviewed


Pssm-ID: 105864  Cd Length: 246  Bit Score: 160.49  E-value: 5.41e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776  10 VAVVLLVGCAgrqeFIPPQPNAEE---YAPPKLDYTLPDAQSGSLY--------RHQYTmTLFQDRRAYRVGDVLTVVLS 78
Cdd:PRK12699  25 VMLALVGGCS----LPTPAPKVQQpmsARPPDLPLIPPSQGNGGIYqaafdyqgRGRYH-PLFEDRRARQIGDTIIVLLN 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776  79 EETSSSKKAGTKFGKSSAVNFAAPTIGTKKFDELGVSID----GSRNFDGSASSSQGNKLQGAITVTVHDVLPNGVLRIS 154
Cdd:PRK12699 100 EKTNASKKSGSNAQRNGDISLSVPSFLGLPFKSIFQDLDleasSSNKFDGKGESSSNNNFTGTITVTVVDILPNGNLLVS 179

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 499418776 155 GEKWLRLNQGDEFIRLTGIVRVDDITrNNQVSSQRIADARITYAGRGALADSNAAGWLTQFF 216
Cdd:PRK12699 180 GEKQIGINQGHEFIRLSGVINPINVI-NNTVSSIQVADARIEYRGNGYLDEAQTMGWLSRFF 240
flgH PRK12701
flagellar basal body L-ring protein; Reviewed
 10-222 5.96e-48

flagellar basal body L-ring protein; Reviewed


Pssm-ID: 183691  Cd Length: 230  Bit Score: 157.24  E-value: 5.96e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776  10 VAVVLLVGCagrQEFIPPQP-NAEEYAPpklDYTL-PDAQ-----SGSLYRHQYTMTLFQDRRAYRVGDVLTVVLSEETS 82
Cdd:PRK12701  11 LATALLFGC---EALHPPAPgDNPDYAP---TYPVtPDPKelrkvSGAIYSSETALPLFETPRARHPGDILTVYLIEKTD 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776  83 SSKKAGTKFGKSSAVN-----FAAPTIGTKKFDELGVSIDGSRNFDGSASSSQGNKLQGAITVTVHDVLPNGVLRISGEK 157
Cdd:PRK12701  85 AQKNATTTQRKNDTTKitnklFLGRPISLGSGYSMDFDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMVVQGEK 164

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 499418776 158 WLRLNQGDEFIRLTGIVRVDDITRNNQVSSQRIADARITYAGRGALADSNAAGWLTQFFNSPWVP 222
Cdd:PRK12701 165 WVRINQGNEFVRLSGIVRPQDIKADNTITSDRIANARISYGGTGQINNTNAQGWLSRILWGPLFP 229
flgH PRK12697
flagellar basal body L-ring protein FlgH;
9-220 7.32e-47

flagellar basal body L-ring protein FlgH;


Pssm-ID: 237175  Cd Length: 226  Bit Score: 154.26  E-value: 7.32e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776   9 AVAVVLLVGCAgrqeFIPPQPNAEE----YAPPKldytlPDAQS-GSLYRHQYT-MTLFQDRRAYRVGDVLTVVLSEETS 82
Cdd:PRK12697  14 AAAAAALAGCA----QIPREPITQQpmtaQPPMP-----PSMQApGSIYNPGYAgRPLFEDQRPRNVGDILTIVIAENIN 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776  83 SSKKAGTKFGKSSAVNFAAPTIGTKK--FDELGVSIDGSRNFDGSASSSQGNKLQGAITVTVHDVLPNGVLRISGEKWLR 160
Cdd:PRK12697  85 ATKSSGANTNRQGNTDFDVPTAGFLGglFNKANLSAQGANKFAATGGASAANTFNGTITVTVTNVLPNGNLVVSGEKQML 164

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 499418776 161 LNQGDEFIRLTGIVRVDDITRNNQVSSQRIADARITYAGRGALADSNAAGWLTQFF--NSPW 220
Cdd:PRK12697 165 INQGNEFVRFSGVVNPNTISGANSVYSTQVADARIEYSAKGYINEAETMGWLQRFFlnIAPW 226
flgH PRK12700
flagellar basal body L-ring protein; Reviewed
 9-216 3.12e-43

flagellar basal body L-ring protein; Reviewed


Pssm-ID: 139164  Cd Length: 230  Bit Score: 145.20  E-value: 3.12e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776   9 AVAVVLLVGCAgrqeFIPPQP--NAEEYAPPKLDyTLPDAQ-SGSLYRHQY--TMTLFQDRRAYRVGDVLTVVLSEETSS 83
Cdd:PRK12700  13 AALLALAAGCA----MIPPEPvvTGPLTAPPPPP-PQPSARpNGSIYQPSAygNYPLFEDRRPRNVGDIVTIVLEEKTNA 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776  84 SKKAGTKFGKSSAVNF---AAPtigtkKF------DELGVSIDGSRNFDGSASSSQGNKLQGAITVTVHDVLPNGVLRIS 154
Cdd:PRK12700  88 AKGVATNTSRDGSATLgvaAAP-----RFmdgvinDKLDTDISGGNTANGTGKSSANNTFTGTITTTVIGVLPNGNLQIA 162

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 499418776 155 GEKWLRLNQGDEFIRLTGIVRVDDITRNNQVSSQRIADARITYAGRGALADSNAAGWLTQFF 216
Cdd:PRK12700 163 GEKQIAINRGSEYVRFSGVVDPRSITGSNTVSSTRVADARIEYRSKGVMDEVQTMGWLQRFF 224
flgH PRK12696
flagellar basal body L-ring protein; Reviewed
 9-223 6.72e-36

flagellar basal body L-ring protein; Reviewed


Pssm-ID: 237174  Cd Length: 236  Bit Score: 126.41  E-value: 6.72e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776   9 AVAVVLLVGC-AGRQEFIPPQPNA--EEYAPPKLDYTLPdaqsGSLYRHQYTMTLFQDRRAYRVGDVLTVVLSEETSSSK 85
Cdd:PRK12696   9 SLAVLLLAGCsAARQQPSPAPPVTppPAYVEPEEPADNP----GSLFSDSEADLLFADSRARRVGDIVLVKIVENSKAKN 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776  86 KAGTK--------------FGKSS-AVNFAAPTIGTKKFDELGVSIDGSRNFDGSASSSQGNKLQGAITVTVHDVLPNGV 150
Cdd:PRK12696  85 KADTTadkkstneygvsafFGQDSvAINPFNPLMGGGVGTDPLLKTSSTSKFSGTGETKRESTVTATIAARVVRVLPGGL 164

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 499418776 151 LRISGEKWLRLNQGDEFIRLTGIVRVDDITRNNQVSSQRIADARITYAGRGALADSNAAGWLTQFFNSPWvPF 223
Cdd:PRK12696 165 MQVEGARETRVNDETQYIVVSGLVRPRDIGPDNSVMSTQLADARIEYYGKGVLADKQRPGWFTRLMDNVW-PF 236
flgH PRK12788
flagellar basal body L-ring protein FlgH;
60-223 2.17e-27

flagellar basal body L-ring protein FlgH;


Pssm-ID: 237202  Cd Length: 234  Bit Score: 104.24  E-value: 2.17e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776  60 LFQDRRAYRVGDVLTVVLS--------EETSSSKKAGTKFGkssaVNFAAPTIGTKKFDELGVSIDGSRNFDGSASSSQG 131
Cdd:PRK12788  68 LYRDPRASRTGDLLTVTISmndkatldNKTDRSRDSQTKFG----LDYLAEFLPWSDKGKLTANVSSQTSTKGTGKIDRT 143

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499418776 132 NKLQGAITVTVHDVLPNGVLRISGEKWLRLNQGDEFIRLTGIVRVDDITRNNQVSSQRIADARITYAGRGALADSNAAGW 211
Cdd:PRK12788 144 EEVKFSVAAIVVDVLPNGNLLISGSQEVRVNYEMRVLNVGGIVRPLDITRNNTIAYEKVAEARISYGGRGRLMEVQQPAW 223

                        170
                 ....*....|..
gi 499418776 212 LTQFFNSPwVPF 223
Cdd:PRK12788 224 GHQVYDQV-VPF 234
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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