NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|502822275|ref|WP_013057251|]
View 

MULTISPECIES: acid-soluble spore protein N [Priestia]

Protein Classification

acid-soluble spore protein N( domain architecture ID 11173824)

acid-soluble spore protein N is expressed only in the forespore compartment of sporulating cells in a sigma F- and sigma G-dependent manner

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
SspN pfam08177
Small acid-soluble spore protein N family; This family consists of the small acid-soluble ...
 1-46 6.12e-15

Small acid-soluble spore protein N family; This family consists of the small acid-soluble spore protein (SASP) N type (sspN). SspN is a 48 residues protein that is expressed only in the forespore compartment of sporulating Bacillus subtilis. The sspN gene is recognized equally by both sigma-G and sigma-F. The role of SspN is still not well-defined.


:

Pssm-ID: 285400  Cd Length: 46  Bit Score: 60.56  E-value: 6.12e-15
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 502822275   1 MGNPKKQSKPFVPNHIGTQPREAGGNNGKQMQDTSGKHPQVIQTKG 46
Cdd:pfam08177  1 MGNPKKKSQQFVPDHLGTQPRKYGGNKGKKMQDKSGQHPQVIQTKG 46
 
Name Accession Description Interval E-value
SspN pfam08177
Small acid-soluble spore protein N family; This family consists of the small acid-soluble ...
 1-46 6.12e-15

Small acid-soluble spore protein N family; This family consists of the small acid-soluble spore protein (SASP) N type (sspN). SspN is a 48 residues protein that is expressed only in the forespore compartment of sporulating Bacillus subtilis. The sspN gene is recognized equally by both sigma-G and sigma-F. The role of SspN is still not well-defined.


Pssm-ID: 285400  Cd Length: 46  Bit Score: 60.56  E-value: 6.12e-15
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 502822275   1 MGNPKKQSKPFVPNHIGTQPREAGGNNGKQMQDTSGKHPQVIQTKG 46
Cdd:pfam08177  1 MGNPKKKSQQFVPDHLGTQPRKYGGNKGKKMQDKSGQHPQVIQTKG 46
sspN PRK09398
acid-soluble spore protein N; Provisional
 1-47 9.42e-15

acid-soluble spore protein N; Provisional


Pssm-ID: 236496  Cd Length: 47  Bit Score: 60.17  E-value: 9.42e-15
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*..
gi 502822275  1 MGNPKKQSKPFVPNHIGTQPREAGGNNGKQMQDTSGKHPQVIQTKGE 47
Cdd:PRK09398  1 MGNPKKNSKQFAPNHLGTQPRKAGGNKGKKMQDQSGKQPQVIQTKGE 47
SspN COG5859
Small acid-soluble spore protein SspN [Cell cycle control, cell division, chromosome ...
 1-47 1.16e-14

Small acid-soluble spore protein SspN [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444561  Cd Length: 47  Bit Score: 59.83  E-value: 1.16e-14
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*..
gi 502822275  1 MGNPKKQSKPFVPNHIGTQPREAGGNNGKQMQDTSGKHPQVIQTKGE 47
Cdd:COG5859   1 MSNPKDNSSQFAPNHLGTQPRKAGGNKGKQMQDKSNEHPQVIQTKGE 47
 
Name Accession Description Interval E-value
SspN pfam08177
Small acid-soluble spore protein N family; This family consists of the small acid-soluble ...
 1-46 6.12e-15

Small acid-soluble spore protein N family; This family consists of the small acid-soluble spore protein (SASP) N type (sspN). SspN is a 48 residues protein that is expressed only in the forespore compartment of sporulating Bacillus subtilis. The sspN gene is recognized equally by both sigma-G and sigma-F. The role of SspN is still not well-defined.


Pssm-ID: 285400  Cd Length: 46  Bit Score: 60.56  E-value: 6.12e-15
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 502822275   1 MGNPKKQSKPFVPNHIGTQPREAGGNNGKQMQDTSGKHPQVIQTKG 46
Cdd:pfam08177  1 MGNPKKKSQQFVPDHLGTQPRKYGGNKGKKMQDKSGQHPQVIQTKG 46
sspN PRK09398
acid-soluble spore protein N; Provisional
 1-47 9.42e-15

acid-soluble spore protein N; Provisional


Pssm-ID: 236496  Cd Length: 47  Bit Score: 60.17  E-value: 9.42e-15
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*..
gi 502822275  1 MGNPKKQSKPFVPNHIGTQPREAGGNNGKQMQDTSGKHPQVIQTKGE 47
Cdd:PRK09398  1 MGNPKKNSKQFAPNHLGTQPRKAGGNKGKKMQDQSGKQPQVIQTKGE 47
SspN COG5859
Small acid-soluble spore protein SspN [Cell cycle control, cell division, chromosome ...
 1-47 1.16e-14

Small acid-soluble spore protein SspN [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444561  Cd Length: 47  Bit Score: 59.83  E-value: 1.16e-14
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*..
gi 502822275  1 MGNPKKQSKPFVPNHIGTQPREAGGNNGKQMQDTSGKHPQVIQTKGE 47
Cdd:COG5859   1 MSNPKDNSSQFAPNHLGTQPRKAGGNKGKQMQDKSNEHPQVIQTKGE 47
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH