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Conserved domains on  [gi|502850325|ref|WP_013085301|]
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MULTISPECIES: Na(+)/H(+) antiporter subunit B [Bacillaceae]

Protein Classification

Na(+)/H(+) antiporter subunit B( domain architecture ID 10014008)

Na(+)/H(+) antiporter subunit B is a component of the Mrp complex, a Na(+)/H(+) antiporter that is considered to be the major Na(+) excretion system

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK12573 PRK12573
Na(+)/H(+) antiporter subunit B;
1-140 8.24e-52

Na(+)/H(+) antiporter subunit B;


:

Pssm-ID: 183602 [Multi-domain]  Cd Length: 140  Bit Score: 160.82  E-value: 8.24e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325   1 MKKNDLILQTTTKVVTFIIIIFAIHLFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKVIPFDYKKVAASGLLLAI 80
Cdd:PRK12573   1 MKMNDLILRTVAKIVTFIILLFSVFLFLAGHNEPGGGFIGGLITASALVILLLAFDIKTVRRALPFDFKILAGIGLLFAI 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325  81 LTGLGSFIFKVPFLTHTYSYFNLPLLGKTSLATVVLFDLGVYLVVVGVTMTIIQTIGESE 140
Cdd:PRK12573  81 ATGLASIFFGVPFLTHLFFYIPLPILGEVELTTAMLFDLGVYLVVVGVTMTIILTIGENE 140
 
Name Accession Description Interval E-value
PRK12573 PRK12573
Na(+)/H(+) antiporter subunit B;
1-140 8.24e-52

Na(+)/H(+) antiporter subunit B;


Pssm-ID: 183602 [Multi-domain]  Cd Length: 140  Bit Score: 160.82  E-value: 8.24e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325   1 MKKNDLILQTTTKVVTFIIIIFAIHLFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKVIPFDYKKVAASGLLLAI 80
Cdd:PRK12573   1 MKMNDLILRTVAKIVTFIILLFSVFLFLAGHNEPGGGFIGGLITASALVILLLAFDIKTVRRALPFDFKILAGIGLLFAI 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325  81 LTGLGSFIFKVPFLTHTYSYFNLPLLGKTSLATVVLFDLGVYLVVVGVTMTIIQTIGESE 140
Cdd:PRK12573  81 ATGLASIFFGVPFLTHLFFYIPLPILGEVELTTAMLFDLGVYLVVVGVTMTIILTIGENE 140
2a6301s02 TIGR00943
monovalent cation:proton antiporter; This family of proteins constists of bacterial ...
 26-132 9.59e-28

monovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter.This family is specific for the phaB and mnhB proteins. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 130018  Cd Length: 107  Bit Score: 98.67  E-value: 9.59e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325   26 LFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKVIPFDYKKVAASGLLLAILTGLGSFIFKVPFLTHTYSYFNLPL 105
Cdd:TIGR00943   1 LFLRGHNAPGGGFVAGLLTASSLILITIAFGIETVRKILPLDPKRLIGIGLLLAIATGVGSWFLGKPFLTSVTGYFPLPI 80

                          90       100
                  ....*....|....*....|....*..
gi 502850325  106 LGKTSLATVVLFDLGVYLVVVGVTMTI 132
Cdd:TIGR00943  81 LGKFELATAVLFDLGVFCVVVGTTMLI 107
MnhB pfam04039
Domain related to MnhB subunit of Na+/H+ antiporter; Possible subunit of Na+/H+ antiporter,. ...
 7-118 1.61e-27

Domain related to MnhB subunit of Na+/H+ antiporter; Possible subunit of Na+/H+ antiporter,. Predicted integral membrane protein, usually four transmembrane regions in this domain. Often found in bacterial NADH dehydrogenase subunit.


Pssm-ID: 461141 [Multi-domain]  Cd Length: 125  Bit Score: 98.70  E-value: 1.61e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325    7 ILQTTTKVVTFIIIIFAIHLFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKVIPFDYKKVAASGLLLAILTGLGS 86
Cdd:pfam04039   1 ILRTVARLLFPLILLFSLYLLLRGHNSPGGGFQGGLVAAAALILLYLAFGREELRRLLPVDPLALEGLGLLLALLTGLLG 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 502850325   87 FIFKVPFLTHTYSYFNLPLLGKTSLATVVLFD 118
Cdd:pfam04039  81 LLFGGPFLTSAFLYVHLPLLGGVHLGTALLFD 112
MnhB COG2111
Multisubunit Na+/H+ antiporter, MnhB subunit [Inorganic ion transport and metabolism];
1-140 1.06e-12

Multisubunit Na+/H+ antiporter, MnhB subunit [Inorganic ion transport and metabolism];


Pssm-ID: 441714 [Multi-domain]  Cd Length: 750  Bit Score: 63.96  E-value: 1.06e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325   1 MKKNDLILQTTTKVVTFIIIIFAIHLFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKVIPFDYKKVAASGLLLAI 80
Cdd:COG2111  610 AAAASLILSRLTRVLLPGILGFSVYLFFRGHNAPGGGFTGGLVEALALILLYLALGRLWVEERLPVDALILIGVGLLLAA 689

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325  81 LTGLGSFIFKVPFLTHTYsyfnLPLLGKTSLATVVLFDLGVYLVVVGVTMTIIQTIGESE 140
Cdd:COG2111  690 LTGLAALLFGGPFLTSAF----LPLAGGLNLVNAILFDFGVFDTVGGITVLILAALGRLR 745
 
Name Accession Description Interval E-value
PRK12573 PRK12573
Na(+)/H(+) antiporter subunit B;
1-140 8.24e-52

Na(+)/H(+) antiporter subunit B;


Pssm-ID: 183602 [Multi-domain]  Cd Length: 140  Bit Score: 160.82  E-value: 8.24e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325   1 MKKNDLILQTTTKVVTFIIIIFAIHLFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKVIPFDYKKVAASGLLLAI 80
Cdd:PRK12573   1 MKMNDLILRTVAKIVTFIILLFSVFLFLAGHNEPGGGFIGGLITASALVILLLAFDIKTVRRALPFDFKILAGIGLLFAI 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325  81 LTGLGSFIFKVPFLTHTYSYFNLPLLGKTSLATVVLFDLGVYLVVVGVTMTIIQTIGESE 140
Cdd:PRK12573  81 ATGLASIFFGVPFLTHLFFYIPLPILGEVELTTAMLFDLGVYLVVVGVTMTIILTIGENE 140
2a6301s02 TIGR00943
monovalent cation:proton antiporter; This family of proteins constists of bacterial ...
 26-132 9.59e-28

monovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter.This family is specific for the phaB and mnhB proteins. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 130018  Cd Length: 107  Bit Score: 98.67  E-value: 9.59e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325   26 LFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKVIPFDYKKVAASGLLLAILTGLGSFIFKVPFLTHTYSYFNLPL 105
Cdd:TIGR00943   1 LFLRGHNAPGGGFVAGLLTASSLILITIAFGIETVRKILPLDPKRLIGIGLLLAIATGVGSWFLGKPFLTSVTGYFPLPI 80

                          90       100
                  ....*....|....*....|....*..
gi 502850325  106 LGKTSLATVVLFDLGVYLVVVGVTMTI 132
Cdd:TIGR00943  81 LGKFELATAVLFDLGVFCVVVGTTMLI 107
MnhB pfam04039
Domain related to MnhB subunit of Na+/H+ antiporter; Possible subunit of Na+/H+ antiporter,. ...
 7-118 1.61e-27

Domain related to MnhB subunit of Na+/H+ antiporter; Possible subunit of Na+/H+ antiporter,. Predicted integral membrane protein, usually four transmembrane regions in this domain. Often found in bacterial NADH dehydrogenase subunit.


Pssm-ID: 461141 [Multi-domain]  Cd Length: 125  Bit Score: 98.70  E-value: 1.61e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325    7 ILQTTTKVVTFIIIIFAIHLFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKVIPFDYKKVAASGLLLAILTGLGS 86
Cdd:pfam04039   1 ILRTVARLLFPLILLFSLYLLLRGHNSPGGGFQGGLVAAAALILLYLAFGREELRRLLPVDPLALEGLGLLLALLTGLLG 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 502850325   87 FIFKVPFLTHTYSYFNLPLLGKTSLATVVLFD 118
Cdd:pfam04039  81 LLFGGPFLTSAFLYVHLPLLGGVHLGTALLFD 112
PRK12574 PRK12574
monovalent cation/H+ antiporter subunit B;
1-138 6.49e-27

monovalent cation/H+ antiporter subunit B;


Pssm-ID: 183603 [Multi-domain]  Cd Length: 141  Bit Score: 97.42  E-value: 6.49e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325   1 MKKNDLILQTTTKVVTFIIIIFAIHLFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKVIPFDYKKVAASGLLLAI 80
Cdd:PRK12574   1 MKENDVVLKTVTKIVVFILLTFGFYLFLAGHNNPGGGFIGGLIFSSAFILMFLAFGVEEVLESLPIDFRKLMIIGLLLSS 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 502850325  81 LTGLGSFIFKVPFLTHTYSYFNLPLLGKTSLATVVLFDLGVYLVVVGVTMTIIQTIGE 138
Cdd:PRK12574  81 ITAIIPMFFGKPFLRQAETFVILPLLGEIHLSSITLFELGILFVVVGVIVTIMLSLSG 138
PRK12648 PRK12648
putative monovalent cation/H+ antiporter subunit A; Reviewed
 6-137 2.33e-24

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237157 [Multi-domain]  Cd Length: 948  Bit Score: 97.18  E-value: 2.33e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325   6 LILQTTTKVVTFIIIIFAIHLFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKVIPFDYKKVAASGLLLAILTGLG 85
Cdd:PRK12648 796 LVPAVLARLLLPLALLVSVYLFLRGHNLPGGGFIAGLVLAIALILQYMASGTRWVEARLRILPHRWIGLGLLIAALTGLG 875

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 502850325  86 SFIFKVPFLTHTYSYFNLPLLGKTSLATVVLFDLGVYLVVVGVTMTIIQTIG 137
Cdd:PRK12648 876 SWLFGYPFLTSAFGYVHLPLIGEVELASALLFDLGVFLLVVGATLLILSALA 927
PRK12509 PRK12509
Na+/H+ antiporter subunit B;
4-140 1.27e-20

Na+/H+ antiporter subunit B;


Pssm-ID: 237122 [Multi-domain]  Cd Length: 137  Bit Score: 81.18  E-value: 1.27e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325   4 NDLILQTTTKVVTFIIIIFAIHLFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKVIPFDYKKVAASGLLLAILTG 83
Cdd:PRK12509   2 YSLILATASRFLLPLLLLFSVFLLLRGHNEPGGGFIGGLVAAAAFALYLIANGIAAARRLLRVDPLRLLAAGLLVAVLSG 81

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 502850325  84 LGSFIFKVPFLTHTYSYFNLPLLGKtsLATVVLFDLGVYLVVVGVTMTIIQTIGESE 140
Cdd:PRK12509  82 LPALFMGLPFLTALWWKLPLPLIGK--VGTPLLFDVGVYLLVLGSTLTIVFSLAEEE 136
PRK12644 PRK12644
putative monovalent cation/H+ antiporter subunit A; Reviewed
 6-137 1.85e-15

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237154 [Multi-domain]  Cd Length: 965  Bit Score: 71.88  E-value: 1.85e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325   6 LILQTTTKVVTFIIIIFAIHLFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKVIPFDYKKVAASGLLLAILTGLG 85
Cdd:PRK12644 808 LVFEVVTRLLFPSMMVLSVYLLFAGHNAPGGGFAGGLVAGLALVLRYLAGGRYELGEALPVDAGRLLGTGLFLSAGTALV 887

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 502850325  86 SFIFKVPFLTHTYSYFNLPLLGKTSLATVVLFDLGVYLVVVGVTMTIIQTIG 137
Cdd:PRK12644 888 SLLLGAPVLSSAIIEFDLPVLGDVKLVTALFFDLGVYLIVVGLVLDVLRSLG 939
MnhB COG2111
Multisubunit Na+/H+ antiporter, MnhB subunit [Inorganic ion transport and metabolism];
1-140 1.06e-12

Multisubunit Na+/H+ antiporter, MnhB subunit [Inorganic ion transport and metabolism];


Pssm-ID: 441714 [Multi-domain]  Cd Length: 750  Bit Score: 63.96  E-value: 1.06e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325   1 MKKNDLILQTTTKVVTFIIIIFAIHLFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKVIPFDYKKVAASGLLLAI 80
Cdd:COG2111  610 AAAASLILSRLTRVLLPGILGFSVYLFFRGHNAPGGGFTGGLVEALALILLYLALGRLWVEERLPVDALILIGVGLLLAA 689

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325  81 LTGLGSFIFKVPFLTHTYsyfnLPLLGKTSLATVVLFDLGVYLVVVGVTMTIIQTIGESE 140
Cdd:COG2111  690 LTGLAALLFGGPFLTSAF----LPLAGGLNLVNAILFDFGVFDTVGGITVLILAALGRLR 745
PRK12508 PRK12508
Na(+)/H(+) antiporter subunit B;
5-102 1.26e-08

Na(+)/H(+) antiporter subunit B;


Pssm-ID: 183563  Cd Length: 139  Bit Score: 50.00  E-value: 1.26e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325   5 DLILQTTTKVVTFIIIIFAIHLFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKVIPFDY-KKVAASGLLLAILTG 83
Cdd:PRK12508   4 NPILRTITKLMIPVIILFGLYVQFHGDYGPGGGFQAGVIVASAIILYSMLFGLSATLKAVPPSFvRLMAALGVLIYGGTG 83

                         90
                 ....*....|....*....
gi 502850325  84 LGSFIFKVPFLTHTYSYFN 102
Cdd:PRK12508  84 IASMLLGGNFLSYDVLIFD 102
PRK08386 PRK08386
putative monovalent cation/H+ antiporter subunit B; Reviewed
 6-107 3.24e-05

putative monovalent cation/H+ antiporter subunit B; Reviewed


Pssm-ID: 236256  Cd Length: 151  Bit Score: 41.24  E-value: 3.24e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325   6 LILQTTTKVVTFIIIIFAIHLFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKVIPFD-YKKVAASGLLLAILTGL 84
Cdd:PRK08386   5 LIVKTAARAIIPLIGIFGAYIVLHGHLTPGGGFQGGATIAGGGALFLVAFGLDEVKKRFNKTlYSALEGLGGLVFLGAAM 84

                         90       100
                 ....*....|....*....|....*
gi 502850325  85 G--SFIFKVPFLTHTYSYFNLPLLG 107
Cdd:PRK08386  85 LgiSVAFFYNILWHTGPLFGGFVGY 109
PRK12567 PRK12567
putative monovalent cation/H+ antiporter subunit B; Reviewed
 4-41 7.82e-05

putative monovalent cation/H+ antiporter subunit B; Reviewed


Pssm-ID: 237140 [Multi-domain]  Cd Length: 218  Bit Score: 40.65  E-value: 7.82e-05
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 502850325   4 NDLILQTTTKVVTFIIIIFAIHLFFAGHYTPGGGFVGG 41
Cdd:PRK12567  88 SDVPLRVLARLLAPFILLFGIYLAIHGHLTPGGGFAAG 125
PRK08387 PRK08387
putative monovalent cation/H+ antiporter subunit B; Reviewed
 6-95 1.39e-04

putative monovalent cation/H+ antiporter subunit B; Reviewed


Pssm-ID: 169420  Cd Length: 131  Bit Score: 39.02  E-value: 1.39e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325   6 LILQTTTKVVTFIIIIFAIHLFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKVIPFDY-KKVAASGLLLAILTGL 84
Cdd:PRK08387   3 LVVRTTTKLVAPFLVTYAAYLMLYGHLSPGGGFQAGVILAVAVILLITSHGYKKVRKRFRKRTvSLLESSSGLFIVGLGI 82

                         90
                 ....*....|.
gi 502850325  85 GSFIFKVPFLT 95
Cdd:PRK08387  83 AGLLFGLFFLN 93
PRK12507 PRK12507
putative monovalent cation/H+ antiporter subunit B; Reviewed
 2-94 1.94e-04

putative monovalent cation/H+ antiporter subunit B; Reviewed


Pssm-ID: 237121 [Multi-domain]  Cd Length: 332  Bit Score: 39.65  E-value: 1.94e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325   2 KKNDLILQTTTKVVTFIIIIFAIHLFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKVIPFDY-KKVAASGLLLAI 80
Cdd:PRK12507 194 SQHYPILKYISKFLIPYIILFSLYVQFHGEFSPGGGFQAGVIFASAIILYAMLYGLRKASRYFPPNVlILIAALGVAIYA 273

                         90
                 ....*....|....
gi 502850325  81 LTGLGSFIFKVPFL 94
Cdd:PRK12507 274 IVGVISLFNGGNFL 287
PRK12650 PRK12650
DUF4040 family protein;
4-88 2.65e-03

DUF4040 family protein;


Pssm-ID: 237158 [Multi-domain]  Cd Length: 962  Bit Score: 36.56  E-value: 2.65e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325   4 NDLILQTTTKVVTFIIIIFAIHLFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKViPFDYKKVAASGLLLAILTG 83
Cdd:PRK12650 784 NSVPLRMLLRVLIPILILLSFALFWRGHNEPGGGFIAALVAGAGLMLLYLSAPRDKAIFV-RNPPLTLIGAGILVAVVTG 862

                         90
                 ....*....|
gi 502850325  84 L-----GSFI 88
Cdd:PRK12650 863 LlgylhGSFL 872
PRK12505 PRK12505
putative monovalent cation/H+ antiporter subunit B; Reviewed
 7-94 2.95e-03

putative monovalent cation/H+ antiporter subunit B; Reviewed


Pssm-ID: 237120  Cd Length: 159  Bit Score: 35.94  E-value: 2.95e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502850325   7 ILQTTTKVVTFIIIIFAIHLFFAGHYTPGGGFVGGLTTSAALVLLLLAFDIKTVSKVIPFDY-KKVAASGLLLAILTGLG 85
Cdd:PRK12505  18 IIMTTVRVVAPFVFTFGLFVMFHGADSPGGGFQGGVIVASVVLMLAFAFGIDATREWLDERLvVAIAVGGVLAFAAIGLG 97


                 ....*....
gi 502850325  86 SFIFKVPFL 94
Cdd:PRK12505  98 TVLLGGAFL 106
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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