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Conserved domains on  [gi|506321011|ref|WP_015840786|]
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MULTISPECIES: flagellar basal body-associated protein FliL [Pectobacterium]

Protein Classification

flagellar basal body-associated protein FliL( domain architecture ID 10012864)

flagellar basal body-associated protein FliL interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
fliL PRK07021
flagellar basal body-associated protein FliL; Reviewed
 1-159 5.33e-64

flagellar basal body-associated protein FliL; Reviewed


:

Pssm-ID: 235909 [Multi-domain]  Cd Length: 162  Bit Score: 193.19  E-value: 5.33e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506321011   1 MSDMQVRP---GRKRSIWLILLIIVALAATGAAGAAWWLLNQKNSATAEQEAPPPPEPVFMPLDTFTVNLVNaDNDPDRV 77
Cdd:PRK07021   2 MSDSAIPPaksGKKRKLWLIILILLLLAAAAGAGYSWWLSKEQATAAAKAAPAPPPAPVFFPLETFTVNLQP-DDDADRV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506321011  78 LYVGFTLRLPDEATRTRFTNYLPEVRSRLLLLLSRQDAIALANEQGKQKLIEQIKQVLSPPLVPGQPNQVVTDVLFTAFI 157
Cdd:PRK07021  81 LYVGLTLRLPDEATRERLKDYLPEVRSRLLLLLSRKHAAELATEEGKQKLAAEIKQTLSQPLVPGQPPQVVTDVLFTAFI 160


                 ..
gi 506321011 158 LR 159
Cdd:PRK07021 161 LQ 162
 
Name Accession Description Interval E-value
fliL PRK07021
flagellar basal body-associated protein FliL; Reviewed
 1-159 5.33e-64

flagellar basal body-associated protein FliL; Reviewed


Pssm-ID: 235909 [Multi-domain]  Cd Length: 162  Bit Score: 193.19  E-value: 5.33e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506321011   1 MSDMQVRP---GRKRSIWLILLIIVALAATGAAGAAWWLLNQKNSATAEQEAPPPPEPVFMPLDTFTVNLVNaDNDPDRV 77
Cdd:PRK07021   2 MSDSAIPPaksGKKRKLWLIILILLLLAAAAGAGYSWWLSKEQATAAAKAAPAPPPAPVFFPLETFTVNLQP-DDDADRV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506321011  78 LYVGFTLRLPDEATRTRFTNYLPEVRSRLLLLLSRQDAIALANEQGKQKLIEQIKQVLSPPLVPGQPNQVVTDVLFTAFI 157
Cdd:PRK07021  81 LYVGLTLRLPDEATRERLKDYLPEVRSRLLLLLSRKHAAELATEEGKQKLAAEIKQTLSQPLVPGQPPQVVTDVLFTAFI 160


                 ..
gi 506321011 158 LR 159
Cdd:PRK07021 161 LQ 162
FliL COG1580
Flagellar basal body-associated protein FliL [Cell motility];
1-159 1.57e-22

Flagellar basal body-associated protein FliL [Cell motility];


Pssm-ID: 441188 [Multi-domain]  Cd Length: 153  Bit Score: 87.32  E-value: 1.57e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506321011   1 MSDmqVRPGRKRSIWLILLIIVALAATGAAGAaWWLLNQKNS--ATAEQEAPPPPEPVFMPLDTFTVNLvnADNDPDRVL 78
Cdd:COG1580    1 MAE--AKKGGKKKLILIILALVVLLLAAGGGA-YFLLGSGAAaeAAEAAAAEPKPPPVYVPLDPFTVNL--ADGGRDRYL 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506321011  79 YVGFTLRLPDEATRTRFTNYLPEVRSRLLLLLSRQDAIALANEQGKQKLIEQIKQVLSPPLvpgQPNQVVTDVLFTAFIL 158
Cdd:COG1580   76 KVGITLEVADEKAAEELEKHMPEIRDALLMLLSSKTAEDLSTPEGKEKLREELLERINEVL---GKEGKVEDVLFTEFVV 152


                 .
gi 506321011 159 R 159
Cdd:COG1580  153 Q 153
FliL pfam03748
Flagellar basal body-associated protein FliL; This FliL protein controls the rotational ...
 61-158 4.66e-12

Flagellar basal body-associated protein FliL; This FliL protein controls the rotational direction of the flagella during chemotaxis. FliL is a cytoplasmic membrane protein associated with the basal body.


Pssm-ID: 461038  Cd Length: 98  Bit Score: 58.83  E-value: 4.66e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506321011   61 DTFTVNLvnADNDPDRVLYVGFTLRLPDEATRTRFtnyLPEVRSRLLLLLSRQDAIALANEQGKQKLIEQIKQVLSPPLV 140
Cdd:pfam03748   5 PPFTVNL--ADGDGDRYLKVSIALEVDDEEALEKR---MPRIRDAIISLLSSKTAEDLSTPEGKEKLKEELLERINKVLG 79

                          90
                  ....*....|....*...
gi 506321011  141 PGQPNQVVTDVLFTAFIL 158
Cdd:pfam03748  80 EKLGKGPVEDVLFTEFVV 97
 
Name Accession Description Interval E-value
fliL PRK07021
flagellar basal body-associated protein FliL; Reviewed
 1-159 5.33e-64

flagellar basal body-associated protein FliL; Reviewed


Pssm-ID: 235909 [Multi-domain]  Cd Length: 162  Bit Score: 193.19  E-value: 5.33e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506321011   1 MSDMQVRP---GRKRSIWLILLIIVALAATGAAGAAWWLLNQKNSATAEQEAPPPPEPVFMPLDTFTVNLVNaDNDPDRV 77
Cdd:PRK07021   2 MSDSAIPPaksGKKRKLWLIILILLLLAAAAGAGYSWWLSKEQATAAAKAAPAPPPAPVFFPLETFTVNLQP-DDDADRV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506321011  78 LYVGFTLRLPDEATRTRFTNYLPEVRSRLLLLLSRQDAIALANEQGKQKLIEQIKQVLSPPLVPGQPNQVVTDVLFTAFI 157
Cdd:PRK07021  81 LYVGLTLRLPDEATRERLKDYLPEVRSRLLLLLSRKHAAELATEEGKQKLAAEIKQTLSQPLVPGQPPQVVTDVLFTAFI 160


                 ..
gi 506321011 158 LR 159
Cdd:PRK07021 161 LQ 162
FliL COG1580
Flagellar basal body-associated protein FliL [Cell motility];
1-159 1.57e-22

Flagellar basal body-associated protein FliL [Cell motility];


Pssm-ID: 441188 [Multi-domain]  Cd Length: 153  Bit Score: 87.32  E-value: 1.57e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506321011   1 MSDmqVRPGRKRSIWLILLIIVALAATGAAGAaWWLLNQKNS--ATAEQEAPPPPEPVFMPLDTFTVNLvnADNDPDRVL 78
Cdd:COG1580    1 MAE--AKKGGKKKLILIILALVVLLLAAGGGA-YFLLGSGAAaeAAEAAAAEPKPPPVYVPLDPFTVNL--ADGGRDRYL 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506321011  79 YVGFTLRLPDEATRTRFTNYLPEVRSRLLLLLSRQDAIALANEQGKQKLIEQIKQVLSPPLvpgQPNQVVTDVLFTAFIL 158
Cdd:COG1580   76 KVGITLEVADEKAAEELEKHMPEIRDALLMLLSSKTAEDLSTPEGKEKLREELLERINEVL---GKEGKVEDVLFTEFVV 152


                 .
gi 506321011 159 R 159
Cdd:COG1580  153 Q 153
FliL pfam03748
Flagellar basal body-associated protein FliL; This FliL protein controls the rotational ...
 61-158 4.66e-12

Flagellar basal body-associated protein FliL; This FliL protein controls the rotational direction of the flagella during chemotaxis. FliL is a cytoplasmic membrane protein associated with the basal body.


Pssm-ID: 461038  Cd Length: 98  Bit Score: 58.83  E-value: 4.66e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506321011   61 DTFTVNLvnADNDPDRVLYVGFTLRLPDEATRTRFtnyLPEVRSRLLLLLSRQDAIALANEQGKQKLIEQIKQVLSPPLV 140
Cdd:pfam03748   5 PPFTVNL--ADGDGDRYLKVSIALEVDDEEALEKR---MPRIRDAIISLLSSKTAEDLSTPEGKEKLKEELLERINKVLG 79

                          90
                  ....*....|....*...
gi 506321011  141 PGQPNQVVTDVLFTAFIL 158
Cdd:pfam03748  80 EKLGKGPVEDVLFTEFVV 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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