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Conserved domains on  [gi|544824979|ref|WP_021240980|]
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MULTISPECIES: fimbrial protein [Enterobacter]

Protein Classification

fimbrial protein( domain architecture ID 10007530)

fimbrial protein similar to Escherichia coli fimbrial adapter PapF, which is required for the correct presentation of the PapG adhesin at the distal end of the tip fibrillum

Gene Ontology:  GO:0009289|GO:0007155
PubMed:  1670938|22411982|2890081

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-178 1.28e-40

Pilin (type 1 fimbrial protein) [Cell motility];


:

Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 134.78  E-value: 1.28e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   1 MNKVALGLIIAAAVgcsaSTFAATNGEGQINFTGEIIDSACQVVNGlSNPLNVQLGKVSKTVFTGAGSTSTLTKFDIQLT 80
Cdd:COG3539    1 MKKLLLALLLALAL----SAAAAAAADGTVNFTGTVVAPTCTINTG-SKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLT 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  81 NCPDTVT-SAAINFGGTPDANNNATLALTpDSDAATGVAIQLVDASEQPVSLYTPSQQYQLTSGTAvNDLEFGARYIQTG 159
Cdd:COG3539   76 NCDAGTSnSVKVTFTGTADSANPGLLANT-GSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGS-ATLPFYARYVATG 153

                        170
                 ....*....|....*....
gi 544824979 160 AAITAGPANSVSTFTVIYN 178
Cdd:COG3539  154 ATVTAGSFNATATFTIDYQ 172
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-178 1.28e-40

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 134.78  E-value: 1.28e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   1 MNKVALGLIIAAAVgcsaSTFAATNGEGQINFTGEIIDSACQVVNGlSNPLNVQLGKVSKTVFTGAGSTSTLTKFDIQLT 80
Cdd:COG3539    1 MKKLLLALLLALAL----SAAAAAAADGTVNFTGTVVAPTCTINTG-SKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLT 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  81 NCPDTVT-SAAINFGGTPDANNNATLALTpDSDAATGVAIQLVDASEQPVSLYTPSQQYQLTSGTAvNDLEFGARYIQTG 159
Cdd:COG3539   76 NCDAGTSnSVKVTFTGTADSANPGLLANT-GSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGS-ATLPFYARYVATG 153

                        170
                 ....*....|....*....
gi 544824979 160 AAITAGPANSVSTFTVIYN 178
Cdd:COG3539  154 ATVTAGSFNATATFTIDYQ 172
lpfA PRK15289
fimbrial protein; Provisional
 9-177 1.54e-28

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 104.66  E-value: 1.54e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   9 IIAAAVGCSASTFA--ATNGEGQINFTGEIIDSACQVVNGLSNPlNVQLGKVSKTVFTGAGSTSTLTKFDIQLTNCPDTV 86
Cdd:PRK15289   5 IIGGAFTLASLMLAghALAEDGVVHFVGEIVDTTCEVTSDTADQ-IVPLGKVSKNAFSGVGSLASPQKFSIKLENCPATY 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  87 TSAAINFGGTPDANNNATLAL-TP-DSD------------AATGVAIQLVDASEQP-VSLYTPSQQYQL-TSGTAvnDLE 150
Cdd:PRK15289  84 TQAAVRFDGTEAPGGDGDLKVgTPlTAGnpgdftgtgqaiAATGVGIRIFNQSDNSqVKLYNDSAYTAIdAEGKA--EMK 161

                        170       180
                 ....*....|....*....|....*..
gi 544824979 151 FGARYIQTGAAITAGPANSVSTFTVIY 177
Cdd:PRK15289 162 FIARYVATNATVTAGTANADSQFTVEY 188
Fimbrial pfam00419
Fimbrial protein;
30-178 7.38e-11

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 57.45  E-value: 7.38e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   30 INFTGEI--IDSACQVVNGLsnPLNVQLGKVSKTVFTGAGSTSTLTKFDIQLtNCPDTVTSAAIN--FGGTPDANNNATL 105
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGT--PIEVDFGQIPVNELNAGGEGSRQKPFSITL-ECSSGSSAVKVTvgLFGTADASSPNLL 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 544824979  106 ALTPDSDAATGVAIQLVDASEQPVSLYTPSQQYQLTSGTAVNDL-EFGARYIQT-GAAITAGPANSVSTFTVIYN 178
Cdd:pfam00419  78 LTGNGAGAATGVGIRLYDANGGALPPNNGTSSIPVSATAAVATGiTFTASLVATtGGTPTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-178 1.28e-40

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 134.78  E-value: 1.28e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   1 MNKVALGLIIAAAVgcsaSTFAATNGEGQINFTGEIIDSACQVVNGlSNPLNVQLGKVSKTVFTGAGSTSTLTKFDIQLT 80
Cdd:COG3539    1 MKKLLLALLLALAL----SAAAAAAADGTVNFTGTVVAPTCTINTG-SKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLT 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  81 NCPDTVT-SAAINFGGTPDANNNATLALTpDSDAATGVAIQLVDASEQPVSLYTPSQQYQLTSGTAvNDLEFGARYIQTG 159
Cdd:COG3539   76 NCDAGTSnSVKVTFTGTADSANPGLLANT-GSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGS-ATLPFYARYVATG 153

                        170
                 ....*....|....*....
gi 544824979 160 AAITAGPANSVSTFTVIYN 178
Cdd:COG3539  154 ATVTAGSFNATATFTIDYQ 172
lpfA PRK15289
fimbrial protein; Provisional
 9-177 1.54e-28

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 104.66  E-value: 1.54e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   9 IIAAAVGCSASTFA--ATNGEGQINFTGEIIDSACQVVNGLSNPlNVQLGKVSKTVFTGAGSTSTLTKFDIQLTNCPDTV 86
Cdd:PRK15289   5 IIGGAFTLASLMLAghALAEDGVVHFVGEIVDTTCEVTSDTADQ-IVPLGKVSKNAFSGVGSLASPQKFSIKLENCPATY 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  87 TSAAINFGGTPDANNNATLAL-TP-DSD------------AATGVAIQLVDASEQP-VSLYTPSQQYQL-TSGTAvnDLE 150
Cdd:PRK15289  84 TQAAVRFDGTEAPGGDGDLKVgTPlTAGnpgdftgtgqaiAATGVGIRIFNQSDNSqVKLYNDSAYTAIdAEGKA--EMK 161

                        170       180
                 ....*....|....*....|....*..
gi 544824979 151 FGARYIQTGAAITAGPANSVSTFTVIY 177
Cdd:PRK15289 162 FIARYVATNATVTAGTANADSQFTVEY 188
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 1-178 6.24e-25

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 95.04  E-value: 6.24e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   1 MNKVALGLIIAAAVgcSASTFAATNGEGQINFTGEIIDSACqVVNGLSNPLNVQLGKVSKTVFTGAGSTSTLTKFDIQLT 80
Cdd:PRK15209   1 MKKVVFALSALALT--STSVFAAESGDGTVKFTGEIVDAPC-VVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKPFQIKLE 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  81 NCP-DTVTSAAINFGGTPDANNNATLALTPDSDAATGVAIQLVDASEQPVSLYTPSQQYQLTSGTAVndLEFGARYIQTG 159
Cdd:PRK15209  78 DCDiTTNKKVNVSFNGVGDADDSTLVSVSTEAGAATGVGIGIYDNANTLVELNTGKSTTTLAAGQTV--LYFTANYVSTK 155

                        170
                 ....*....|....*....
gi 544824979 160 AAITAGPANSVSTFTVIYN 178
Cdd:PRK15209 156 DTVTTGYGNAEVDFNLSYE 174
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
4-177 2.61e-18

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 78.07  E-value: 2.61e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   4 VALGLIIAAAVGCSASTFAATNGeGQINFTGEIIDSACqVVNGLSNPLNVQLGKVSKTVFTGAGSTSTLTKFDIQLTNC- 82
Cdd:PRK15194  10 IASLLFVAGAAYAADPTPVSVDG-GTIHFEGELVNAAC-SVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFTIQLNDCd 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  83 PDTVTSAAINFGGTPDANNNATLALTP--DSDAATGVAIQLVDASEQPVSL--YTPSQQYQLTSGTavNDLEFGARYIQT 158
Cdd:PRK15194  88 PVVAATAAVAFSGQADATNDNLLAVASstNTTTATGVGIEILDNTSSILKPdgATFSANQNLIEGT--NTLHFSARYKAT 165

                        170
                 ....*....|....*....
gi 544824979 159 GAAITAGPANSVSTFTVIY 177
Cdd:PRK15194 166 GTSASAGQANADATFIMKY 184
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 10-177 5.25e-18

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 76.68  E-value: 5.25e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  10 IAAAVGCSASTFAATNGEGQINFTGEIIDSACQVVNGLSNpLNVQLGKVSKTVFTGAGSTSTLTKFDIQLTNCPDTVTSA 89
Cdd:PRK15191   5 ILYGIGMLLAASGVQAHDGRVYVSGTITDNTCSLSPGSEN-INVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCGSTASGV 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  90 AINFGGTPDANNNATLALTPDSDAATGVAIQLVDASEQPVSLYTPSQQYQLTSGTAVNDLEFGARYIQTGAAITAGPANS 169
Cdd:PRK15191  84 TVSFSGAADSRNTDLLALTAGESDASGIGIALYDQNKTLIPLGQESDVVTLSPGQASAHLQFYARYLADGGAVTPGDANA 163


                 ....*...
gi 544824979 170 VSTFTVIY 177
Cdd:PRK15191 164 SATFILAY 171
PRK09934 PRK09934
fimbriae assembly protein;
8-178 6.49e-17

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 73.77  E-value: 6.49e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   8 LIIAAAVGCSASTFAATN-GEGQINFTGEIIDSACQVVNGLSNPlNVQLGKVSKTVFTGAGSTSTLTKFDIQLTNCPDtv 86
Cdd:PRK09934   6 FACFCGLLWSPLSWAADPlGEINIELHGNVVDFTCTVNTADSDK-TVDLGTWPTKQLLNAGDTTQPVPFSLKLEGCPP-- 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  87 TSAAINFGGTPdANNNATLALTpDSDAATGVAIQLVDASEQPVSLYTPSQQYQL-TSGTAVndLEFGARYIQTGAAITAG 165
Cdd:PRK09934  83 GSASITFTGTP-ASDTNLLALD-DPAMAQTVAIEIRDSDRSRLALGQASPTVEVdANGNAT--LNFYANYIALADGVQPG 158

                        170
                 ....*....|...
gi 544824979 166 PANSVSTFTVIYN 178
Cdd:PRK09934 159 VAKADATFMINYN 171
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 1-177 1.32e-13

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 65.49  E-value: 1.32e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   1 MNKVALGLIIAAAVGCSASTFAATNGEGQINFTGEIIDSACQV-VNGLSNplNVQLGKVSKTVFTGAGSTSTLTKFDIQL 79
Cdd:PRK15190   1 MNRSHCALFAMGLMLCPQINASADDLAYNLEFTGTIVAQTCDIdISSLSQ--SIDLGQFAVGDFPSTGTTTKFKPFNINL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  80 TNCPDTVTSAAINFGGTPDANNNATLALT-----PDSDAATGVAIQLVDASEQPVSL-YTPSQQYQLTSGTavNDLEFGA 153
Cdd:PRK15190  79 KNCSRGIAGAKIWFTGEPDPDNPALLAITdtgmgSGNMLASGVGVEILNDDQDTISInNADSVVYPLKAGR--NTLSFYI 156

                        170       180
                 ....*....|....*....|....
gi 544824979 154 RYIQTGAAITAGPANSVSTFTVIY 177
Cdd:PRK15190 157 RYKSTRPTVTSGNATAVMYFDMQY 180
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 1-177 1.37e-13

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 65.26  E-value: 1.37e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   1 MNKVALGLIIAAAVGCSASTFAATNGEGQINFTGEIIDSACQVVNglsNPLNVQLGKVSKTVFTGAGSTSTLTKFDIQLT 80
Cdd:PRK15205   3 NKRALLPLALLLLTASGMAAPTDLGPAGDIHFTITIKAKACELEK---DSLEVDMGTMVLQKPVKVGTELNQKNFSIGLK 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  81 NCpDTVTSAAINFGGTPDANNNATLALtpDSDAATGVAIQLVDA--SEQPVSLYTPSQQYQLTSGTAVNDLEFGARYIQT 158
Cdd:PRK15205  80 DC-DGISKASVTMDGSPDPDDPSLFAL--DAGGATGVALKIKTSkgTQQYPKSTDGTPVEWAINGDGTTQLNYIASYVPV 156

                        170
                 ....*....|....*....
gi 544824979 159 GAAITAGPANSVSTFTVIY 177
Cdd:PRK15205 157 NADATVGTANATVNFSVTY 175
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 12-178 1.75e-11

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 59.72  E-value: 1.75e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  12 AAVGCSASTFAATNGEGQINFTGEIIDSACQVVnglSNPLNVQLGKVSKTVFTGAGSTSTLTKFDIQLTNCPDTV-TSAA 90
Cdd:PRK15300  13 AAITLSPAALADTAKDGTVHITGLIKQNACTVK---TDSVEVTLQEEFASLFTAAGQTAGDTDFTIELENCDANVySSVQ 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  91 INFGGTPDANNNATLAltpDSDAATGVAIQLVDASEQPVS---LYTPSQQYQLTSGTAVNDLE--FGARYIQTGAAITAG 165
Cdd:PRK15300  90 ARFEGTLDGTDATILK---NEDDAENIGVQILDKTSTPMTfndLQAWSAAVALPTAEGVTELSmpFTARYIATAVPVKSG 166

                        170
                 ....*....|...
gi 544824979 166 PANSVSTFTVIYN 178
Cdd:PRK15300 167 TVDATATFYLQYN 179
PRK15210 PRK15210
fimbrial protein;
2-177 2.65e-11

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 59.33  E-value: 2.65e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   2 NKVALGLIiAAAVGCSASTFAATN-------GEGQINFTGEIIDSACQVVNGlSNPLNVQLGKVSKTVFTGAGSTSTLTK 74
Cdd:PRK15210   3 NKIILAMA-AAGMMYGASVFAADTtptagpfGSGKILFTGTITNSPCDIAPG-DDAITVPFGQISYRKLNTADATTESKP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  75 FDIQLTNC------PDTVTSAA------INFGGTPDANNNATLAltpdSDAATGVAIQLVDASEqpVSLYTPSQQY---- 138
Cdd:PRK15210  81 FTIHLQNCafdpniPDTAGSAGkmskvtVSFSGTANTSKKAYTT----SGSAQHVGVQLLKSDN--TSIIEPNTPMpdgd 154

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 544824979 139 --QLTSGTavNDLEFGARYIQTGAAITAGPANSVSTFTVIY 177
Cdd:PRK15210 155 aqQLQAGN--NELNFFARLIALDNGVTPGDFNASVTYTLKY 193
Fimbrial pfam00419
Fimbrial protein;
30-178 7.38e-11

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 57.45  E-value: 7.38e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   30 INFTGEI--IDSACQVVNGLsnPLNVQLGKVSKTVFTGAGSTSTLTKFDIQLtNCPDTVTSAAIN--FGGTPDANNNATL 105
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGT--PIEVDFGQIPVNELNAGGEGSRQKPFSITL-ECSSGSSAVKVTvgLFGTADASSPNLL 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 544824979  106 ALTPDSDAATGVAIQLVDASEQPVSLYTPSQQYQLTSGTAVNDL-EFGARYIQT-GAAITAGPANSVSTFTVIYN 178
Cdd:pfam00419  78 LTGNGAGAATGVGIRLYDANGGALPPNNGTSSIPVSATAAVATGiTFTASLVATtGGTPTAGDFNATATIVVDYQ 152
PRK15296 PRK15296
fimbrial protein SthA;
1-177 1.29e-09

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 54.71  E-value: 1.29e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   1 MNKVALGLIIAAAVGCSASTFAATNgegqINFTGEIIDSACQVVNGLSNPLNVQLGKVSKTVFTGAGSTSTLTKFDIQLT 80
Cdd:PRK15296   1 MFNKKIIILAMLTAVASTPVFAQNT----ITFNGKIYDQACTVQVNGSTDTTIDLGNYSKERIAEKGATTDYVPFTVSLV 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  81 NCPDTV----TSAAINFGGTPDANNNATL--ALTPDSDAATGVAIQLVDASEQPVSLYTPSQQYQLTSGTAVNDLEFGAR 154
Cdd:PRK15296  77 SCPEAGtgvpTQAMFRFHGATDDSNPTYFknADEGSETGAAGVGISIQNASHSDVTDNTDDAAVNLPTDGSTADFTYYAA 156

                        170       180
                 ....*....|....*....|....
gi 544824979 155 YIQTGAA-ITAGPANSVSTFTVIY 177
Cdd:PRK15296 157 MANDGSAtVTGGDVSTQVTYTVSY 180
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 1-178 1.32e-09

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 54.44  E-value: 1.32e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   1 MNKVALGLIIAAAVG----CSASTFAATNGEGQINFTGEIIDSACQVvNGLSNPLNVQLGKVSKTVFTGAGSTSTLTK-F 75
Cdd:PRK15187   1 MKKPVLALMVSAIAFggmlSTAQADTTTVTGGTVNFVGQVVDAACSV-SADSVDQTVTLGQVRASKLTEAGMVANQKEdF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  76 DIQLTNCPDTVT-SAAINFGGTPDANNNATLALTPDSDAATGVAIQLVDASEQPVSLYTPSQQYQLTSGTavNDLEFGAR 154
Cdd:PRK15187  80 TIKLEDCDTQTSqNAAVIFNGQQDANQPGSLANTAGAGSATNVALQLYGPDGQALNIGESSSTVTLNDGE--NVIPLSVD 157

                        170       180
                 ....*....|....*....|....
gi 544824979 155 YIQTGAAiTAGPANSVSTFTVIYN 178
Cdd:PRK15187 158 YIATGTA-TAGNVTATATFSMVYS 180
PRK09733 PRK09733
fimbrial-like protein;
8-177 5.05e-09

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 53.03  E-value: 5.05e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   8 LIIAAAVGCSASTFAaTNGEGQINFTGEIIDSACQVVNGLSNpLNVQLGKVSKTVFTgAGSTSTLTKFDIQLTNC----- 82
Cdd:PRK09733   7 LVAGVAMILSNNVFA-DEGHGIVKFKGEVISAPCSIKPGDED-LTVNLGEVADTVLK-SDQKSLAEPFTIHLQDCmlsqg 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  83 PDTVTSAAINFG-GTPDANNNATLALTPDSD--AATGVAIQLVDASEQPVSLYTPSqQYQLTSGTAVNDLEFGARYIQTG 159
Cdd:PRK09733  84 GTTYSKAKVTFTtANTMTGQSDLLKNTKETEigGATGVGVRILDSQSGEVTLGTPV-VITFNNTNSYQELNFKARMESPS 162

                        170
                 ....*....|....*...
gi 544824979 160 AAITAGPANSVSTFTVIY 177
Cdd:PRK09733 163 KDATPGNVYAQADYKIAY 180
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
28-177 7.06e-09

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 52.55  E-value: 7.06e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  28 GQINFTGEIIDSACqVVNGLSNPLNVQLGKVSKTVFTGAGSTSTLT-KFDIQLTNCPDTVTS-AAINFGGTPDANNNATL 105
Cdd:PRK15200  27 GRVHLRGQLVNGGC-AVATESQDLRVLMGQYRTNAFTGPGSFAPVSvPFSLRLISCSAEVWRhVGIAFAGVTPAEDPHVF 105

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 544824979 106 ALTPDSDAATGVAIQLVDASEQ---PVSL---YTPSQQYQLTsgtavndLEFGARYIQTGAAITAGPANSVSTFTVIY 177
Cdd:PRK15200 106 LASGEGIGNAGIGLALFDDQQRqiiPNTLplhYAPILTSEMT-------LHFTARYRAISENMTPGRIHSEVWFTLVY 176
PRK15293 PRK15293
fimbrial protein SthD;
17-177 4.36e-08

fimbrial protein SthD;


Pssm-ID: 185193  Cd Length: 185  Bit Score: 50.44  E-value: 4.36e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  17 SASTFAATNGEGQINF--TGEIIDSACQVvnglSNPLNVQLGKVSKTVFTGAGSTSTLTKFDIQLTNCPDTVTSAAINFG 94
Cdd:PRK15293  22 SPSISAAYNTADAVDInvTGLIYADPCTV----TVPDTLSLGQYARADIAVAGGNTATIPFTIKMTNCPATTTKAAISFN 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  95 GTPDANNNATLALTPDSDA--ATGVAIQLVDASEQPVSLYTPSQQYQ--LTSGTAVNDLEFGARYIQTGAAITAGPANSV 170
Cdd:PRK15293  98 GVPYPDPNYASAIYANSAAnpAQDLGLQLFNLDGKSLVNLANNVTYTvdINSNTHEANLPVAARMYTPYGKVTAGDFTSV 177


                 ....*..
gi 544824979 171 STFTVIY 177
Cdd:PRK15293 178 VTITIAW 184
PRK15292 PRK15292
type 1 fimbrial protein;
48-178 1.15e-07

type 1 fimbrial protein;


Pssm-ID: 237935 [Multi-domain]  Cd Length: 365  Bit Score: 50.33  E-value: 1.15e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  48 SNPLNVQLGKVSKTVFTGAGSTSTLTKfDIQLTNCPDTVTSAAINF----GGTPDaNNNATLALTPDSDAATGVAIQL-V 122
Cdd:PRK15292 203 TPALTFDMGSINAGSFANSQTVGTAEQ-DILLSCEPGTNVSASVSAqpasGDNPD-NTVIALSNASAPTSATGVGVQLnI 280

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979 123 DASE-----------QPVSLYTPSQQYQLTSGTAVN------------------DLEFGARYIQTGAAITAGPANSVSTF 173
Cdd:PRK15292 281 QAPDagfftdslpinTKIDLFTSTRTTNADGSQTVSysyftnpdspggamnmstTLKISANYYKTGATVTAGQANATGTL 360


                 ....*
gi 544824979 174 TVIYN 178
Cdd:PRK15292 361 TLTYN 365
PRK15220 PRK15220
fimbrial protein YehD;
8-176 6.11e-06

fimbrial protein YehD;


Pssm-ID: 237928  Cd Length: 178  Bit Score: 44.42  E-value: 6.11e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   8 LIIAA----AVGCSASTFAATNGEGQINFTGEIIDSACQVVNglSNPLNVQLGKVSKTVFTGAG----------STSTLT 73
Cdd:PRK15220   4 SLIAAsvlsAVFMSAGAFAADEDMGELKINGKVVGTTCQFLG--TNSATIELNQVGVDRLANLNpgqiytgytnPTAMPL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  74 KFDIQLTNCPdTVTSAAINFGGTPDANNNATlaltpdSDAATGVAIQLVDASEQPvslyTPSQQYQLTSGTAVN---DLE 150
Cdd:PRK15220  82 KVKCTQGAAP-RISFSRSQFVDNMDITKNNG------SANGAGFAVYYDGTDVKP----DPETGVTLNPNKFENgvyTLN 150

                        170       180
                 ....*....|....*....|....*.
gi 544824979 151 FGARYIQTGAAITAGPANSVSTFTVI 176
Cdd:PRK15220 151 FSARYARVDNDVTSGDVESTLTLTVV 176
FimA pfam16970
Type-1 fimbrial protein, A; FimA is a family of Gram-negative fimbrial component A proteins ...
 55-177 3.76e-04

Type-1 fimbrial protein, A; FimA is a family of Gram-negative fimbrial component A proteins that form part of the pili. There are usually up to 1000 copies of this subunit in one pilus that form a helically wound rod onto which the tip fibrillum (FimF.FimG, FimH) is attached. Pilus subunits are translocated from the cytoplasm to the periplasm via the general secretory pathway SecYEG.


Pssm-ID: 339870  Cd Length: 145  Bit Score: 38.94  E-value: 3.76e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   55 LGKVSKTVFTGAGSTSTLTKFDIQLTNCPDTVTSAA-----INFGGTPDANNNATLALTPDsDAATGVAIQLVDASEQPV 129
Cdd:pfam16970   1 LPTISNKALADPGETAGGTPFDIKLTECPQALDGAGhvgafFEPGGSTDFTSGNLFAIAAD-NAAGDEQIPLLKADGTQA 79

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 544824979  130 SLYTPS-----------QQYQLTSGTAVND-----LEFGARYIQTGAA-ITAGPANSVSTFTVIY 177
Cdd:pfam16970  80 NLDGSAiflgkdfaaqaAHTFLVSETAGGDgygatLRYLACYIASGAGsIVAGNLKSQVGFSIAY 144
PRK15262 PRK15262
putative fimbrial protein StaF; Provisional
 30-92 5.78e-04

putative fimbrial protein StaF; Provisional


Pssm-ID: 237933  Cd Length: 197  Bit Score: 38.90  E-value: 5.78e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 544824979  30 INFTGEIIDSACQVvnGLSNPLNVQLGKVSKTVFTGAGSTSTL----TKFDIQLTNCPDTVTSAAIN 92
Cdd:PRK15262  30 VDLTANIKNSTCQS--GISNNGNVDLGTVGVGYFADNVTAETYypggKEFTITVVDCALQGTGSVLN 94
PRK15307 PRK15307
major fimbrial protein StkA; Provisional
 1-178 1.82e-03

major fimbrial protein StkA; Provisional


Pssm-ID: 185207  Cd Length: 201  Bit Score: 37.33  E-value: 1.82e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979   1 MNKVALGLIIAAAVGCSaSTFAATNGEGQINFTGEIIDSACQVV--NGLS---NPLNVQLGKVSKTVF-TGAGSTSTL-- 72
Cdd:PRK15307   3 LKKYGLAAAVAMTLSAS-SAMAADPDTGTITFHGLVTNNTCNISldNKIDqdgNDFDITLPTVFVKDFaTALGVNSTLge 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544824979  73 TKFDIQLTNCPD-TVTSAAINFGGTPDANNNATLALTPDSD---AATGVAIQLVDASEQPVSLYTPSQQYQLTSGTAVND 148
Cdd:PRK15307  82 KQFTLNLSECDNaTLKDASAQFNSWGGSSATSGGLLVPPANlqgSATNVNLVLANNGNTATDLIKIDQPNNTQKATISTD 161

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 544824979 149 ----------LEFGARYIQTGAAITAGPANSVSTFTVIYN 178
Cdd:PRK15307 162 gtgdlfyrvaYTQGQKWNADTSPVTSGTVQAQVAFTMIYN 201
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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