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Conserved domains on  [gi|552554224|ref|WP_023009553|]
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MULTISPECIES: DUF3301 domain-containing protein [Marinobacter]

Protein Classification

DUF3301 domain-containing protein( domain architecture ID 10570167)

DUF3301 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3301 pfam11743
Protein of unknown function (DUF3301); This family is conserved in Proteobacteria, but the ...
 7-100 1.89e-32

Protein of unknown function (DUF3301); This family is conserved in Proteobacteria, but the function is not known.


:

Pssm-ID: 432041  Cd Length: 93  Bit Score: 108.40  E-value: 1.89e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552554224    7 FWLFVAGFAIWyWWRAKAIKDFVLQAAHRYCKSMDVMLLDDAVYLRGLWFKRDQNGKLRVWRRFLFDFTTTGEERYTGRI 86
Cdd:pfam11743   1 LLLLLAAAAAW-FWQSRRARERALQAARRACERLDLQLLDDAVALRRLRLRRDARGRLRLRRVYRFEFSSDGEDRYQGRL 79

                          90
                  ....*....|....
gi 552554224   87 IMLGQSIIHTELEP 100
Cdd:pfam11743  80 VMLGLRVVSVELPP 93
 
Name Accession Description Interval E-value
DUF3301 pfam11743
Protein of unknown function (DUF3301); This family is conserved in Proteobacteria, but the ...
 7-100 1.89e-32

Protein of unknown function (DUF3301); This family is conserved in Proteobacteria, but the function is not known.


Pssm-ID: 432041  Cd Length: 93  Bit Score: 108.40  E-value: 1.89e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552554224    7 FWLFVAGFAIWyWWRAKAIKDFVLQAAHRYCKSMDVMLLDDAVYLRGLWFKRDQNGKLRVWRRFLFDFTTTGEERYTGRI 86
Cdd:pfam11743   1 LLLLLAAAAAW-FWQSRRARERALQAARRACERLDLQLLDDAVALRRLRLRRDARGRLRLRRVYRFEFSSDGEDRYQGRL 79

                          90
                  ....*....|....
gi 552554224   87 IMLGQSIIHTELEP 100
Cdd:pfam11743  80 VMLGLRVVSVELPP 93
 
Name Accession Description Interval E-value
DUF3301 pfam11743
Protein of unknown function (DUF3301); This family is conserved in Proteobacteria, but the ...
 7-100 1.89e-32

Protein of unknown function (DUF3301); This family is conserved in Proteobacteria, but the function is not known.


Pssm-ID: 432041  Cd Length: 93  Bit Score: 108.40  E-value: 1.89e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552554224    7 FWLFVAGFAIWyWWRAKAIKDFVLQAAHRYCKSMDVMLLDDAVYLRGLWFKRDQNGKLRVWRRFLFDFTTTGEERYTGRI 86
Cdd:pfam11743   1 LLLLLAAAAAW-FWQSRRARERALQAARRACERLDLQLLDDAVALRRLRLRRDARGRLRLRRVYRFEFSSDGEDRYQGRL 79

                          90
                  ....*....|....
gi 552554224   87 IMLGQSIIHTELEP 100
Cdd:pfam11743  80 VMLGLRVVSVELPP 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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