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Conserved domains on  [gi|942027151|ref|WP_055269559|]
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MULTISPECIES: zinc ribbon domain-containing protein [Bacteroides]

Protein Classification

DZR and FHA domain-containing protein( domain architecture ID 12119947)

DZR and FHA domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FHA cd00060
forkhead associated (FHA) domain superfamily; Forkhead-associated (FHA) domains are small ...
214-271 6.69e-07

forkhead associated (FHA) domain superfamily; Forkhead-associated (FHA) domains are small phosphopeptide recognition modules mostly found in eubacteria and eukaryotes. It is about 95-120 residues long that fold into an 11-stranded beta-sandwich. FHA domains can mediate the recognition of phosphorylated and non-phosphorylated substrates, as well as protein oligomerization. They specifically recognize threonine phosphorylation (pThr) accompanying activation of protein serine/threonine kinases. FHA domains show diverse ligand specificity. They may recognize the pTXXD motif, the pTXXI/L motif, and TQ clusters (singly and multiply phosphorylated). In eukaryotes, FHA superfamily members include forkhead-type transcription factors, as well as other signaling proteins, such as many regulatory proteins, kinases, phosphatases, motor proteins called kinesins, and metabolic enzymes. Many of them localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. FHA domains play important roles in human diseases, particularly in relation to DNA damage responses and cancers. In bacteria, FHA domain-containing proteins may participate in injection of viral proteins into host cells, transmembrane transporters, and cell division. FHA domain-containing proteins rarely include more than one copy of the domain. The only exception in eukaryotes is the checkpoint kinase Rad53 from Saccharomyces cerevisiae, which harbors two FHA domains (FHA1 and FHA2) flanking a central kinase domain. The two FHA domains recognize different phosphorylated targets and function independently from one another. In contrast, Mycobacterium tuberculosis ABC transporter Rv1747 contains two FHA domains but only one of them is essential for protein function.


:

Pssm-ID: 438714 [Multi-domain]  Cd Length: 92  Bit Score: 46.50  E-value: 6.69e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 942027151 214 VSNRTItSKEQAEIVFEDGHWYLLDRSELRTTFI---QANRKIEIIPDDIIVLGDRRFKFE 271
Cdd:cd00060   33 LDDPSV-SRRHARIEVDGGGVYLEDLGSTNGTFVngkRITPPVPLQDGDVIRLGDTTFRFE 92
DZR pfam12773
Double zinc ribbon; This family consists of a pair of zinc ribbon domains.
87-154 4.59e-05

Double zinc ribbon; This family consists of a pair of zinc ribbon domains.


:

Pssm-ID: 432773 [Multi-domain]  Cd Length: 45  Bit Score: 40.05  E-value: 4.59e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 942027151   87 CPNCSYPIVGEFTSCPCCGTPLERAdksaddkhkkieektsflpedkmACQECGKEIDITCSFCPHCG 154
Cdd:pfam12773   1 CPNCGHPNPPGAKFCPACGTPLKPD-----------------------RCPNCGAPVPPNARFCPYCG 45
 
Name Accession Description Interval E-value
FHA cd00060
forkhead associated (FHA) domain superfamily; Forkhead-associated (FHA) domains are small ...
214-271 6.69e-07

forkhead associated (FHA) domain superfamily; Forkhead-associated (FHA) domains are small phosphopeptide recognition modules mostly found in eubacteria and eukaryotes. It is about 95-120 residues long that fold into an 11-stranded beta-sandwich. FHA domains can mediate the recognition of phosphorylated and non-phosphorylated substrates, as well as protein oligomerization. They specifically recognize threonine phosphorylation (pThr) accompanying activation of protein serine/threonine kinases. FHA domains show diverse ligand specificity. They may recognize the pTXXD motif, the pTXXI/L motif, and TQ clusters (singly and multiply phosphorylated). In eukaryotes, FHA superfamily members include forkhead-type transcription factors, as well as other signaling proteins, such as many regulatory proteins, kinases, phosphatases, motor proteins called kinesins, and metabolic enzymes. Many of them localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. FHA domains play important roles in human diseases, particularly in relation to DNA damage responses and cancers. In bacteria, FHA domain-containing proteins may participate in injection of viral proteins into host cells, transmembrane transporters, and cell division. FHA domain-containing proteins rarely include more than one copy of the domain. The only exception in eukaryotes is the checkpoint kinase Rad53 from Saccharomyces cerevisiae, which harbors two FHA domains (FHA1 and FHA2) flanking a central kinase domain. The two FHA domains recognize different phosphorylated targets and function independently from one another. In contrast, Mycobacterium tuberculosis ABC transporter Rv1747 contains two FHA domains but only one of them is essential for protein function.


Pssm-ID: 438714 [Multi-domain]  Cd Length: 92  Bit Score: 46.50  E-value: 6.69e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 942027151 214 VSNRTItSKEQAEIVFEDGHWYLLDRSELRTTFI---QANRKIEIIPDDIIVLGDRRFKFE 271
Cdd:cd00060   33 LDDPSV-SRRHARIEVDGGGVYLEDLGSTNGTFVngkRITPPVPLQDGDVIRLGDTTFRFE 92
DZR pfam12773
Double zinc ribbon; This family consists of a pair of zinc ribbon domains.
87-154 4.59e-05

Double zinc ribbon; This family consists of a pair of zinc ribbon domains.


Pssm-ID: 432773 [Multi-domain]  Cd Length: 45  Bit Score: 40.05  E-value: 4.59e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 942027151   87 CPNCSYPIVGEFTSCPCCGTPLERAdksaddkhkkieektsflpedkmACQECGKEIDITCSFCPHCG 154
Cdd:pfam12773   1 CPNCGHPNPPGAKFCPACGTPLKPD-----------------------RCPNCGAPVPPNARFCPYCG 45
FHA COG1716
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms];
214-271 1.64e-04

Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms];


Pssm-ID: 441322 [Multi-domain]  Cd Length: 96  Bit Score: 39.94  E-value: 1.64e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 942027151 214 VSNRTItSKEQAEIVFEDGHWYLLDRSELRTTFI---QANRKIEIIPDDIIVLGDRRFKFE 271
Cdd:COG1716   35 LDDPTV-SRRHARIRRDGGGWVLEDLGSTNGTFVngqRVTEPAPLRDGDVIRLGKTELRFR 94
 
Name Accession Description Interval E-value
FHA cd00060
forkhead associated (FHA) domain superfamily; Forkhead-associated (FHA) domains are small ...
214-271 6.69e-07

forkhead associated (FHA) domain superfamily; Forkhead-associated (FHA) domains are small phosphopeptide recognition modules mostly found in eubacteria and eukaryotes. It is about 95-120 residues long that fold into an 11-stranded beta-sandwich. FHA domains can mediate the recognition of phosphorylated and non-phosphorylated substrates, as well as protein oligomerization. They specifically recognize threonine phosphorylation (pThr) accompanying activation of protein serine/threonine kinases. FHA domains show diverse ligand specificity. They may recognize the pTXXD motif, the pTXXI/L motif, and TQ clusters (singly and multiply phosphorylated). In eukaryotes, FHA superfamily members include forkhead-type transcription factors, as well as other signaling proteins, such as many regulatory proteins, kinases, phosphatases, motor proteins called kinesins, and metabolic enzymes. Many of them localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. FHA domains play important roles in human diseases, particularly in relation to DNA damage responses and cancers. In bacteria, FHA domain-containing proteins may participate in injection of viral proteins into host cells, transmembrane transporters, and cell division. FHA domain-containing proteins rarely include more than one copy of the domain. The only exception in eukaryotes is the checkpoint kinase Rad53 from Saccharomyces cerevisiae, which harbors two FHA domains (FHA1 and FHA2) flanking a central kinase domain. The two FHA domains recognize different phosphorylated targets and function independently from one another. In contrast, Mycobacterium tuberculosis ABC transporter Rv1747 contains two FHA domains but only one of them is essential for protein function.


Pssm-ID: 438714 [Multi-domain]  Cd Length: 92  Bit Score: 46.50  E-value: 6.69e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 942027151 214 VSNRTItSKEQAEIVFEDGHWYLLDRSELRTTFI---QANRKIEIIPDDIIVLGDRRFKFE 271
Cdd:cd00060   33 LDDPSV-SRRHARIEVDGGGVYLEDLGSTNGTFVngkRITPPVPLQDGDVIRLGDTTFRFE 92
DZR pfam12773
Double zinc ribbon; This family consists of a pair of zinc ribbon domains.
87-154 4.59e-05

Double zinc ribbon; This family consists of a pair of zinc ribbon domains.


Pssm-ID: 432773 [Multi-domain]  Cd Length: 45  Bit Score: 40.05  E-value: 4.59e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 942027151   87 CPNCSYPIVGEFTSCPCCGTPLERAdksaddkhkkieektsflpedkmACQECGKEIDITCSFCPHCG 154
Cdd:pfam12773   1 CPNCGHPNPPGAKFCPACGTPLKPD-----------------------RCPNCGAPVPPNARFCPYCG 45
FHA COG1716
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms];
214-271 1.64e-04

Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms];


Pssm-ID: 441322 [Multi-domain]  Cd Length: 96  Bit Score: 39.94  E-value: 1.64e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 942027151 214 VSNRTItSKEQAEIVFEDGHWYLLDRSELRTTFI---QANRKIEIIPDDIIVLGDRRFKFE 271
Cdd:COG1716   35 LDDPTV-SRRHARIRRDGGGWVLEDLGSTNGTFVngqRVTEPAPLRDGDVIRLGKTELRFR 94
zinc_ribbon_15 pfam17032
zinc-ribbon family; This zinc-ribbon region is found on a set of largely ...
87-154 7.28e-03

zinc-ribbon family; This zinc-ribbon region is found on a set of largely microsporidia-specific proteins.


Pssm-ID: 465334 [Multi-domain]  Cd Length: 73  Bit Score: 34.58  E-value: 7.28e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 942027151   87 CPNCSYPIVGEFTSCPCCGTPLEradksaddkhkkieektsflPEDKMACQECGKEIDITCSFCPHCG 154
Cdd:pfam17032  26 IPVFKWGKSKPYLACSCCGSLYG--------------------DSKVKICPNCGTVVEPDFRYCPRCG 73
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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