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Conserved domains on  [gi|1130423431|ref|WP_075592653|]
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F0F1 ATP synthase subunit delta [Glaesserella parasuis]

Protein Classification

FoF1 ATP synthase subunit delta( domain architecture ID 10012586)

F0F1 ATP synthase subunit delta is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Gene Ontology:  GO:0046933|GO:0015986|GO:0045261
PubMed:  30901262
SCOP:  3000714

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 1-175 4.88e-78

F0F1 ATP synthase subunit delta; Validated


:

Pssm-ID: 235593  Cd Length: 177  Bit Score: 230.06  E-value: 4.88e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431   1 MSQLTTVARPYAKAAFDFALEQGQLDKWQEMLQFSALVAENEDVQHFIHSSSAATQVADTFIAICGDQLDQYGQNFIRVM 80
Cdd:PRK05758    1 MSELSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSLSEYVQNFLKVL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431  81 AENKRLSALPSVFASFNQIRAEYESVKDVFVTSATSLTKAQEDKIANAMKQKLNSEVRITTSIDASLIAGVIIRYDDIVV 160
Cdd:PRK05758   81 AENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRKVKLNEKVDPSLIGGVIIKVGDRVI 160

                         170
                  ....*....|....*
gi 1130423431 161 DGSSRGQLNRLSQEL 175
Cdd:PRK05758  161 DGSVRGKLERLKDAL 175
 
Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 1-175 4.88e-78

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 230.06  E-value: 4.88e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431   1 MSQLTTVARPYAKAAFDFALEQGQLDKWQEMLQFSALVAENEDVQHFIHSSSAATQVADTFIAICGDQLDQYGQNFIRVM 80
Cdd:PRK05758    1 MSELSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSLSEYVQNFLKVL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431  81 AENKRLSALPSVFASFNQIRAEYESVKDVFVTSATSLTKAQEDKIANAMKQKLNSEVRITTSIDASLIAGVIIRYDDIVV 160
Cdd:PRK05758   81 AENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRKVKLNEKVDPSLIGGVIIKVGDRVI 160

                         170
                  ....*....|....*
gi 1130423431 161 DGSSRGQLNRLSQEL 175
Cdd:PRK05758  161 DGSVRGKLERLKDAL 175
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 1-175 2.14e-63

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 193.06  E-value: 2.14e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431   1 MSqLTTVARPYAKAAFDFALEQGQLDKWQEMLQ-FSALVAENEDVQHFIHSSSA-ATQVADTFIAICGDQLDQYGQNFIR 78
Cdd:COG0712     1 MA-LSTIARRYAKALFELAKEKGALDEVEEELFaLAALLAENPELRALLSSPVIsAEEKKELLEALFGGKLSPETLNFLK 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431  79 VMAENKRLSALPSVFASFNQIRAEYESVKDVFVTSATSLTKAQEDKIANAMKQKLNSEVRITTSIDASLIAGVIIRYDDI 158
Cdd:COG0712    80 LLVENGRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKTGKKVELNVKVDPSLIGGVVVRVGDK 159

                         170
                  ....*....|....*..
gi 1130423431 159 VVDGSSRGQLNRLSQEL 175
Cdd:COG0712   160 VIDGSVRGRLNRLRRAL 176
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 7-175 1.69e-58

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 180.41  E-value: 1.69e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431   7 VARPYAKAAFDFALEQGQLDKWQEMLQ-FSALVAENEDVQHFIHSSS-AATQVADTFIAICGDQLDQYGQNFIRVMAENK 84
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEaLEAALAENPDLAAFLSNPTiSAEEKKALLLELFKGLLSPLTLNFLKLLAENG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431  85 RLSALPSVFASFNQIRAEYESVKDVFVTSATSLTKAQEDKIANAMKQKLN-SEVRITTSIDASLIAGVIIRYDDIVVDGS 163
Cdd:pfam00213  81 RLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGkKKVKLENKVDPSLIGGVVVRVGDKVIDGS 160

                         170
                  ....*....|..
gi 1130423431 164 SRGQLNRLSQEL 175
Cdd:pfam00213 161 VKGKLERLKRAL 172
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 7-175 2.20e-54

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 169.80  E-value: 2.20e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431   7 VARPYAKAAFDFALEQGQLDKWQEMLQF-SALVAENEDVQHFI-HSSSAATQVADTFIAICGDQLDQYGQNFIRVMAENK 84
Cdd:TIGR01145   1 VARPYAKALFEIANEKSSLEEWGEMLNFvKEVLKNNKELKKFLsNPLISAEKKKEFIKNVFGEQLDESSLNLLLLLAENG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431  85 RLSALPSVFASFNQIRAEYESVKDVFVTSATSLTKAQEDKIANAMKQKLNSE-VRITTSIDASLIAGVIIRYDDIVVDGS 163
Cdd:TIGR01145  81 RLAALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAAkVKLNCKVDKDLIGGVIIRIGDRVIDGS 160

                         170
                  ....*....|..
gi 1130423431 164 SRGQLNRLSQEL 175
Cdd:TIGR01145 161 VRGQLKRLSRQL 172
 
Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 1-175 4.88e-78

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 230.06  E-value: 4.88e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431   1 MSQLTTVARPYAKAAFDFALEQGQLDKWQEMLQFSALVAENEDVQHFIHSSSAATQVADTFIAICGDQLDQYGQNFIRVM 80
Cdd:PRK05758    1 MSELSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSLSEYVQNFLKVL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431  81 AENKRLSALPSVFASFNQIRAEYESVKDVFVTSATSLTKAQEDKIANAMKQKLNSEVRITTSIDASLIAGVIIRYDDIVV 160
Cdd:PRK05758   81 AENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRKVKLNEKVDPSLIGGVIIKVGDRVI 160

                         170
                  ....*....|....*
gi 1130423431 161 DGSSRGQLNRLSQEL 175
Cdd:PRK05758  161 DGSVRGKLERLKDAL 175
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 1-175 2.14e-63

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 193.06  E-value: 2.14e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431   1 MSqLTTVARPYAKAAFDFALEQGQLDKWQEMLQ-FSALVAENEDVQHFIHSSSA-ATQVADTFIAICGDQLDQYGQNFIR 78
Cdd:COG0712     1 MA-LSTIARRYAKALFELAKEKGALDEVEEELFaLAALLAENPELRALLSSPVIsAEEKKELLEALFGGKLSPETLNFLK 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431  79 VMAENKRLSALPSVFASFNQIRAEYESVKDVFVTSATSLTKAQEDKIANAMKQKLNSEVRITTSIDASLIAGVIIRYDDI 158
Cdd:COG0712    80 LLVENGRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKTGKKVELNVKVDPSLIGGVVVRVGDK 159

                         170
                  ....*....|....*..
gi 1130423431 159 VVDGSSRGQLNRLSQEL 175
Cdd:COG0712   160 VIDGSVRGRLNRLRRAL 176
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 7-175 1.69e-58

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 180.41  E-value: 1.69e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431   7 VARPYAKAAFDFALEQGQLDKWQEMLQ-FSALVAENEDVQHFIHSSS-AATQVADTFIAICGDQLDQYGQNFIRVMAENK 84
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEaLEAALAENPDLAAFLSNPTiSAEEKKALLLELFKGLLSPLTLNFLKLLAENG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431  85 RLSALPSVFASFNQIRAEYESVKDVFVTSATSLTKAQEDKIANAMKQKLN-SEVRITTSIDASLIAGVIIRYDDIVVDGS 163
Cdd:pfam00213  81 RLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGkKKVKLENKVDPSLIGGVVVRVGDKVIDGS 160

                         170
                  ....*....|..
gi 1130423431 164 SRGQLNRLSQEL 175
Cdd:pfam00213 161 VKGKLERLKRAL 172
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 7-175 2.20e-54

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 169.80  E-value: 2.20e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431   7 VARPYAKAAFDFALEQGQLDKWQEMLQF-SALVAENEDVQHFI-HSSSAATQVADTFIAICGDQLDQYGQNFIRVMAENK 84
Cdd:TIGR01145   1 VARPYAKALFEIANEKSSLEEWGEMLNFvKEVLKNNKELKKFLsNPLISAEKKKEFIKNVFGEQLDESSLNLLLLLAENG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431  85 RLSALPSVFASFNQIRAEYESVKDVFVTSATSLTKAQEDKIANAMKQKLNSE-VRITTSIDASLIAGVIIRYDDIVVDGS 163
Cdd:TIGR01145  81 RLAALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAAkVKLNCKVDKDLIGGVIIRIGDRVIDGS 160

                         170
                  ....*....|..
gi 1130423431 164 SRGQLNRLSQEL 175
Cdd:TIGR01145 161 VRGQLKRLSRQL 172
PRK13429 PRK13429
F0F1 ATP synthase subunit delta; Provisional
 4-175 5.49e-37

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237386  Cd Length: 181  Bit Score: 125.70  E-value: 5.49e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431   4 LTTVARPYAKAAFDFALEQGQLDKWQEML-QFSALVAENEDVQHFIHSSS-AATQVADTFIAICGD-QLDQYGQNFIRVM 80
Cdd:PRK13429    3 LNAIARRYAKALFQLAKEKGQLDSVYEELkQLAELLEDSPELRDALSNPVlSAEEKKAVLEKLLGKlKVSPEVLNFLKLL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431  81 AENKRLSALPSVFASFNQIRAEYESVKDVFVTSATSLTKAQEDKIANAMKQKLNSEVRITTSIDASLIAGVIIRYDDIVV 160
Cdd:PRK13429   83 ADRRRLGILPEIAARYLELADEQKGIVRATVTSAVPLSEAQQEAIRQKLEKMTGKKVELDTAVDPSLIGGVVVKIGDKVL 162

                         170
                  ....*....|....*
gi 1130423431 161 DGSSRGQLNRLSQEL 175
Cdd:PRK13429  163 DASVRTQLRRLKETL 177
atpD CHL00119
ATP synthase CF1 delta subunit; Validated
 7-175 3.71e-21

ATP synthase CF1 delta subunit; Validated


Pssm-ID: 177042  Cd Length: 184  Bit Score: 85.04  E-value: 3.71e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431   7 VARPYAKAAFDFALEQGQLDKW-QEMLQFSALVAENEDVQHFIH----SSSAATQVadtFIAICGDQLDQYGQNFIRVMA 81
Cdd:CHL00119    8 IAQPYAEALLEFAKEKNIMEQItADIQLILTFLNESPELKKFLAnpliSKNAKKEV---IKKTFGSQINENTLKFLMVLV 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431  82 ENKRLSALPSVFASFNQIRAEYESVKDVFVTSATSLTKAQEDKIANAMKQKLNS-EVRITTSIDASLIAGVIIRYDDIVV 160
Cdd:CHL00119   85 DRGRIALLDAIIEKYLELVYKLASIKIAEVSTAVPLSSAQEEALIEKLKEMTNAkEIKLVITVDPSLIGGFLIKIGSKVI 164

                         170
                  ....*....|....*
gi 1130423431 161 DGSSRGQLNRLSQEL 175
Cdd:CHL00119  165 DTSIKGQLKQLASHL 179
PRK13441 PRK13441
F0F1 ATP synthase subunit delta; Provisional
 3-174 1.05e-15

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184054  Cd Length: 180  Bit Score: 70.94  E-value: 1.05e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431   3 QLTTVARPYAKAAFDFALEQGQLDKWQEMLQFSALVAENEDV--QHFIHSSSAATQVADTFIAICGDQLDQYGQNFIRVM 80
Cdd:PRK13441    2 RYSAIASKYARALLNVAIELEKEEEYGEFLDLVCQIYESAKEffDNPIVKPEKKVSLIKEIMKEFGQEMDEFFENFLNLV 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431  81 AENKRLSALPSVFASFNQIRAEYESVKDVFVTSATSLTKAQEDKIANAMKQKLNSEVRITTSIDASLIAGVIIRYDDIVV 160
Cdd:PRK13441   82 FENKRQKLLPQIRALFEYEKILSEQKVPVNLTTAHELSDEELKLLRKFVRKYVLRDPVFEETIDESLIAGAVVEFEGKRL 161

                         170
                  ....*....|....
gi 1130423431 161 DGSSRGQLNRLSQE 174
Cdd:PRK13441  162 DVTVQGRLKKIARE 175
PRK13436 PRK13436
F0F1 ATP synthase subunit delta; Provisional
 11-175 2.96e-13

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184053  Cd Length: 179  Bit Score: 64.30  E-value: 2.96e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431  11 YAKAAFDFALEQGQLDKW-QEMLQFSALVAENEDV-----QHFIHSSSAATQVADTFIAicgdQLDQYGQNFIRVMAENK 84
Cdd:PRK13436   11 YAEALFDIANEENNVEKYiNEVFKIIEILKNNKDLiklltSYFIDKEEKFKIIDKIFSA----KIDIYLVNFLKILAKNN 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431  85 RLSALPSVFASFNQIRAEYESVKDVFVTSATSLTKAQEDKIANAMKQKLNSEVRITTSIDASLIAGVIIRYDDIVVDGSS 164
Cdd:PRK13436   87 LFIYIKQILKKFVKLSNEKLNITYGEIYTTEPLSEVQISRFESKLSKKLNKKVHLVNKIDPKLIAGIKIKVDNKVFENSI 166

                         170
                  ....*....|.
gi 1130423431 165 RGQLNRLSQEL 175
Cdd:PRK13436  167 KSKLKELKKQV 177
PRK13434 PRK13434
F0F1 ATP synthase subunit delta; Provisional
 29-175 8.25e-10

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 139571  Cd Length: 184  Bit Score: 55.32  E-value: 8.25e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431  29 QEMLQFSALVAENEDVQHFIHSSSAA-TQVADTFIAICGDQLDQYGQNFIRVMAENKRLSALPSVFASFnqiRAEYESVK 107
Cdd:PRK13434   26 QELGDLVQLLFKDEKIRNFFLSPTVSpEEKEQTLAKNLRGKISDITLNFLGVLLNKGRFIYLPEIQKDF---TVELDKKK 102

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1130423431 108 D---VFVTSATSLTKAQEDKIANAMKQKLNSEVRITTSIDASLIAGVIIRYDDIVVDGSSRGQLNRLSQEL 175
Cdd:PRK13434  103 GrvrAQIVSYPSLEPAQVDKLGSILSEKFKSEFILEVSEDKNLLGGFVVQFNDLKIEKSIASQLGEIKKAM 173
PRK08474 PRK08474
F0F1 ATP synthase subunit delta; Validated
 7-144 1.18e-08

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 236271  Cd Length: 176  Bit Score: 51.90  E-value: 1.18e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1130423431   7 VARPYAKAAFDfALEQGQLDKWQEMLQFSALVAENEDVQHFIHSSS-AATQVADTFIAICGDQLDQYgQNFIRVMAENKR 85
Cdd:PRK08474    5 IAKRYAKALLS-SLSSDELNDIYSNLKILSSAFADEKFKEIISSPEiSKEQKIEFLLSFVDNANAKF-QNFIKLLAENKR 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1130423431  86 LSALPSVFASFNQIRAEYESVKDVFVTSATSLTKAQEDKIANAMKQKLNSEVRITTSID 144
Cdd:PRK08474   83 LELIPAIAKELERQIALKENEYVGVVYSNEKLSEETLKKLEEKLSKKFNAKIKLKQKKS 141
PRK13430 PRK13430
F0F1 ATP synthase subunit delta; Provisional
 111-175 7.11e-07

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237387 [Multi-domain]  Cd Length: 271  Bit Score: 47.63  E-value: 7.11e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1130423431 111 VTSATSLTKAQEDKIANAMKQKLNSEVRITTSIDASLIAGVIIRYDDIVVDGSSRGQLNRLSQEL 175
Cdd:PRK13430  205 VTTAVPLSDEQKQRLAAALSRIYGRPVHLNSEVDPSVLGGMRVQVGDEVIDGSVAGRLERLRRRL 269
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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