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Conserved domains on  [gi|124810261|ref|XP_001348815|]
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1-deoxy-D-xylulose 5-phosphate reductoisomerase [Plasmodium falciparum 3D7]

Protein Classification

1-deoxy-D-xylulose-5-phosphate reductoisomerase( domain architecture ID 11481007)

1-deoxy-D-xylulose-5-phosphate reductoisomerase catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK05447 PRK05447
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
79-485 9.59e-180

1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional


:

Pssm-ID: 235472  Cd Length: 385  Bit Score: 508.46  E-value: 9.59e-180
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261  79 NVAIFGSTGSIGTNALNIIRECNkiENvFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELvknIKDYKPII 158
Cdd:PRK05447   3 RITILGSTGSIGTQTLDVIRRNP--DR-FRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEA---LAAAGIEV 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 159 LCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAGFFLKKLLNIHkNAKIIPVDSEHSAIF 238
Cdd:PRK05447  77 LAGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALANKESLVCAGELVMDAAKKS-GAQILPVDSEHSAIF 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 239 QCLDNNKvlktkclqdnfskINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLEVIE 318
Cdd:PRK05447 156 QCLPGEK-------------QEGVEKIILTASGGPFRDWPLEELANVTPEQALKHPNWSMGRKITIDSATMMNKGLEVIE 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 319 THFLFDVDYNDIEVIVHKECIIHSCVEFIDKSVISQMYYPDMQIPILYSLTWPDRIKTNLKPLDLAQVSTLTFHKPSLEH 398
Cdd:PRK05447 223 AHWLFGLPYEQIEVVIHPQSIIHSMVEYVDGSVLAQLGPPDMRLPIAYALAYPERVPSGVKPLDLTKLGTLTFEPPDFER 302
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 399 FPCIKLAYQAGIKGNFYPTVLNASNEIANNLFLNNKIKYFDISSIISQVLESFNSQKVSensedlMKQILQIHSWAKDKA 478
Cdd:PRK05447 303 FPCLKLAYEALKAGGTAPAVLNAANEVAVAAFLAGKIGFLDIADLIEKVLERHNPEPPS------LEDVLEADAEARERA 376

                 ....*..
gi 124810261 479 TDIYNKH 485
Cdd:PRK05447 377 RELIARL 383
 
Name Accession Description Interval E-value
PRK05447 PRK05447
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
79-485 9.59e-180

1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional


Pssm-ID: 235472  Cd Length: 385  Bit Score: 508.46  E-value: 9.59e-180
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261  79 NVAIFGSTGSIGTNALNIIRECNkiENvFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELvknIKDYKPII 158
Cdd:PRK05447   3 RITILGSTGSIGTQTLDVIRRNP--DR-FRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEA---LAAAGIEV 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 159 LCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAGFFLKKLLNIHkNAKIIPVDSEHSAIF 238
Cdd:PRK05447  77 LAGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALANKESLVCAGELVMDAAKKS-GAQILPVDSEHSAIF 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 239 QCLDNNKvlktkclqdnfskINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLEVIE 318
Cdd:PRK05447 156 QCLPGEK-------------QEGVEKIILTASGGPFRDWPLEELANVTPEQALKHPNWSMGRKITIDSATMMNKGLEVIE 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 319 THFLFDVDYNDIEVIVHKECIIHSCVEFIDKSVISQMYYPDMQIPILYSLTWPDRIKTNLKPLDLAQVSTLTFHKPSLEH 398
Cdd:PRK05447 223 AHWLFGLPYEQIEVVIHPQSIIHSMVEYVDGSVLAQLGPPDMRLPIAYALAYPERVPSGVKPLDLTKLGTLTFEPPDFER 302
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 399 FPCIKLAYQAGIKGNFYPTVLNASNEIANNLFLNNKIKYFDISSIISQVLESFNSQKVSensedlMKQILQIHSWAKDKA 478
Cdd:PRK05447 303 FPCLKLAYEALKAGGTAPAVLNAANEVAVAAFLAGKIGFLDIADLIEKVLERHNPEPPS------LEDVLEADAEARERA 376

                 ....*..
gi 124810261 479 TDIYNKH 485
Cdd:PRK05447 377 RELIARL 383
Dxr COG0743
1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid transport and metabolism]; ...
79-485 1.84e-178

1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid transport and metabolism]; 1-deoxy-D-xylulose 5-phosphate reductoisomerase is part of the Pathway/BioSystem: Isoprenoid biosynthesis


Pssm-ID: 440506  Cd Length: 385  Bit Score: 505.31  E-value: 1.84e-178
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261  79 NVAIFGSTGSIGTNALNIIREcNKieNVFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELvknIKDYKPII 158
Cdd:COG0743    3 RIAILGSTGSIGTQTLDVIRR-HP--DRFRVVALAAGSNVELLAEQAREFRPEYVVVADEAAAEELREA---LAGSGIEV 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 159 LCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAGFFLKKLLNIHkNAKIIPVDSEHSAIF 238
Cdd:COG0743   77 LAGEEALIEVAALPEVDVVMAAIVGAAGLLPTLAAIRAGKRIALANKESLVVAGELVMAAAKEH-GAQLLPVDSEHSAIF 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 239 QCLDNNKvlktkclqdnfskINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLEVIE 318
Cdd:COG0743  156 QCLPGED-------------REGVERIILTASGGPFRGRPREELANVTPEQALAHPNWSMGRKITIDSATMMNKGLEVIE 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 319 THFLFDVDYNDIEVIVHKECIIHSCVEFIDKSVISQMYYPDMQIPILYSLTWPDRIKTNLKPLDLAQVSTLTFHKPSLEH 398
Cdd:COG0743  223 AHWLFDVPPDQIEVVVHPQSIIHSMVEFVDGSVLAQLGPPDMRLPIAYALAYPERIPSGVPPLDLAKLGTLTFEPPDEER 302
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 399 FPCIKLAYQAGIKGNFYPTVLNASNEIANNLFLNNKIKYFDISSIISQVLESFNSQKVsensEDLmKQILQIHSWAKDKA 478
Cdd:COG0743  303 FPCLRLAYEALRAGGTAPAVLNAANEVAVAAFLAGRIGFLDIADVVEKVLERHPPIAP----PSL-EDVLEADAWARRRA 377

                 ....*..
gi 124810261 479 TDIYNKH 485
Cdd:COG0743  378 RELIARL 384
Dxr TIGR00243
1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate is converted ...
79-478 6.73e-135

1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]


Pssm-ID: 161787 [Multi-domain]  Cd Length: 389  Bit Score: 394.96  E-value: 6.73e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261   79 NVAIFGSTGSIGTNALNIIRecnKIENVFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELVKNiKDYKPII 158
Cdd:TIGR00243   3 QIVILGSTGSIGKSTLDVVR---HNPDHFQVVALSAGKNVALMVEQILEFRPKFVAIDDEASLKDLKTMLQQ-QGSRTEV 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261  159 LCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAGFFLKKLLNIHKnAKIIPVDSEHSAIF 238
Cdd:TIGR00243  79 LVGEEGICEMAALEDVDQVMNAIVGAAGLLPTLAAIRAGKTIALANKESLVTAGHLFLDAVKKYG-VQLLPVDSEHNAIF 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261  239 QCLDNNKvlktkclqdnfsKINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLEVIE 318
Cdd:TIGR00243 158 QSLQHGL------------EELGVVSIILTASGGAFRDTPLEDLPTVTPQQALKHPNWSMGRKITIDSATMMNKGLEYIE 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261  319 THFLFDVDYNDIEVIVHKECIIHSCVEFIDKSVISQMYYPDMQIPILYSLTWPDRIKTNLKPLDLAQVSTLTFHKPSLEH 398
Cdd:TIGR00243 226 ARWLFGASAEQIDVLIHPQSIIHSMVEFQDGSVIAQLGEPDMRLPIAYAMAWPNRVNSGVKPLDLCKLSALTFEEPDFDR 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261  399 FPCIKLAYQAGIKGNFYPTVLNASNEIANNLFLNNKIKYFDISSIISQVLESFNSQKVSEnsedlMKQILQIHSWAKDKA 478
Cdd:TIGR00243 306 YPCLKLAMEAFKAGQAATTVLNAANEVAVAAFLAQQIRFLDIAALISKVLYRMQPRKPQS-----LEDVLEVDKNARETA 380
DXP_reductoisom pfam02670
1-deoxy-D-xylulose 5-phosphate reductoisomerase; This is a family of 1-deoxy-D-xylulose ...
80-212 2.15e-50

1-deoxy-D-xylulose 5-phosphate reductoisomerase; This is a family of 1-deoxy-D-xylulose 5-phosphate reductoisomerases. This enzyme catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate in the presence of NADPH. This reaction is part of the terpenoid biosynthesis pathway.


Pssm-ID: 460644 [Multi-domain]  Cd Length: 127  Bit Score: 168.04  E-value: 2.15e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261   80 VAIFGSTGSIGTNALNIIRECnkiENVFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELVKNIKdykPIIL 159
Cdd:pfam02670   1 ITILGSTGSIGTQTLDVIRRH---PDRFEVVALAAGRNVELLAEQIKEFKPKYVAVADEEAAEELKAALAGTG---TEVL 74
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 124810261  160 CGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAG 212
Cdd:pfam02670  75 AGEEGLCEVAALPEADIVMAAIVGAAGLLPTLAAIKAGKRIALANKESLVAAG 127
 
Name Accession Description Interval E-value
PRK05447 PRK05447
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
79-485 9.59e-180

1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional


Pssm-ID: 235472  Cd Length: 385  Bit Score: 508.46  E-value: 9.59e-180
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261  79 NVAIFGSTGSIGTNALNIIRECNkiENvFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELvknIKDYKPII 158
Cdd:PRK05447   3 RITILGSTGSIGTQTLDVIRRNP--DR-FRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEA---LAAAGIEV 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 159 LCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAGFFLKKLLNIHkNAKIIPVDSEHSAIF 238
Cdd:PRK05447  77 LAGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALANKESLVCAGELVMDAAKKS-GAQILPVDSEHSAIF 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 239 QCLDNNKvlktkclqdnfskINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLEVIE 318
Cdd:PRK05447 156 QCLPGEK-------------QEGVEKIILTASGGPFRDWPLEELANVTPEQALKHPNWSMGRKITIDSATMMNKGLEVIE 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 319 THFLFDVDYNDIEVIVHKECIIHSCVEFIDKSVISQMYYPDMQIPILYSLTWPDRIKTNLKPLDLAQVSTLTFHKPSLEH 398
Cdd:PRK05447 223 AHWLFGLPYEQIEVVIHPQSIIHSMVEYVDGSVLAQLGPPDMRLPIAYALAYPERVPSGVKPLDLTKLGTLTFEPPDFER 302
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 399 FPCIKLAYQAGIKGNFYPTVLNASNEIANNLFLNNKIKYFDISSIISQVLESFNSQKVSensedlMKQILQIHSWAKDKA 478
Cdd:PRK05447 303 FPCLKLAYEALKAGGTAPAVLNAANEVAVAAFLAGKIGFLDIADLIEKVLERHNPEPPS------LEDVLEADAEARERA 376

                 ....*..
gi 124810261 479 TDIYNKH 485
Cdd:PRK05447 377 RELIARL 383
Dxr COG0743
1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid transport and metabolism]; ...
79-485 1.84e-178

1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid transport and metabolism]; 1-deoxy-D-xylulose 5-phosphate reductoisomerase is part of the Pathway/BioSystem: Isoprenoid biosynthesis


Pssm-ID: 440506  Cd Length: 385  Bit Score: 505.31  E-value: 1.84e-178
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261  79 NVAIFGSTGSIGTNALNIIREcNKieNVFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELvknIKDYKPII 158
Cdd:COG0743    3 RIAILGSTGSIGTQTLDVIRR-HP--DRFRVVALAAGSNVELLAEQAREFRPEYVVVADEAAAEELREA---LAGSGIEV 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 159 LCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAGFFLKKLLNIHkNAKIIPVDSEHSAIF 238
Cdd:COG0743   77 LAGEEALIEVAALPEVDVVMAAIVGAAGLLPTLAAIRAGKRIALANKESLVVAGELVMAAAKEH-GAQLLPVDSEHSAIF 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 239 QCLDNNKvlktkclqdnfskINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLEVIE 318
Cdd:COG0743  156 QCLPGED-------------REGVERIILTASGGPFRGRPREELANVTPEQALAHPNWSMGRKITIDSATMMNKGLEVIE 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 319 THFLFDVDYNDIEVIVHKECIIHSCVEFIDKSVISQMYYPDMQIPILYSLTWPDRIKTNLKPLDLAQVSTLTFHKPSLEH 398
Cdd:COG0743  223 AHWLFDVPPDQIEVVVHPQSIIHSMVEFVDGSVLAQLGPPDMRLPIAYALAYPERIPSGVPPLDLAKLGTLTFEPPDEER 302
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 399 FPCIKLAYQAGIKGNFYPTVLNASNEIANNLFLNNKIKYFDISSIISQVLESFNSQKVsensEDLmKQILQIHSWAKDKA 478
Cdd:COG0743  303 FPCLRLAYEALRAGGTAPAVLNAANEVAVAAFLAGRIGFLDIADVVEKVLERHPPIAP----PSL-EDVLEADAWARRRA 377

                 ....*..
gi 124810261 479 TDIYNKH 485
Cdd:COG0743  378 RELIARL 384
Dxr TIGR00243
1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate is converted ...
79-478 6.73e-135

1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]


Pssm-ID: 161787 [Multi-domain]  Cd Length: 389  Bit Score: 394.96  E-value: 6.73e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261   79 NVAIFGSTGSIGTNALNIIRecnKIENVFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELVKNiKDYKPII 158
Cdd:TIGR00243   3 QIVILGSTGSIGKSTLDVVR---HNPDHFQVVALSAGKNVALMVEQILEFRPKFVAIDDEASLKDLKTMLQQ-QGSRTEV 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261  159 LCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAGFFLKKLLNIHKnAKIIPVDSEHSAIF 238
Cdd:TIGR00243  79 LVGEEGICEMAALEDVDQVMNAIVGAAGLLPTLAAIRAGKTIALANKESLVTAGHLFLDAVKKYG-VQLLPVDSEHNAIF 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261  239 QCLDNNKvlktkclqdnfsKINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLEVIE 318
Cdd:TIGR00243 158 QSLQHGL------------EELGVVSIILTASGGAFRDTPLEDLPTVTPQQALKHPNWSMGRKITIDSATMMNKGLEYIE 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261  319 THFLFDVDYNDIEVIVHKECIIHSCVEFIDKSVISQMYYPDMQIPILYSLTWPDRIKTNLKPLDLAQVSTLTFHKPSLEH 398
Cdd:TIGR00243 226 ARWLFGASAEQIDVLIHPQSIIHSMVEFQDGSVIAQLGEPDMRLPIAYAMAWPNRVNSGVKPLDLCKLSALTFEEPDFDR 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261  399 FPCIKLAYQAGIKGNFYPTVLNASNEIANNLFLNNKIKYFDISSIISQVLESFNSQKVSEnsedlMKQILQIHSWAKDKA 478
Cdd:TIGR00243 306 YPCLKLAMEAFKAGQAATTVLNAANEVAVAAFLAQQIRFLDIAALISKVLYRMQPRKPQS-----LEDVLEVDKNARETA 380
PRK12464 PRK12464
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
82-484 2.14e-131

1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional


Pssm-ID: 237107  Cd Length: 383  Bit Score: 385.68  E-value: 2.14e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261  82 IFGSTGSIGTNALNIIRecNKIENvFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKElvkNIKDYKPIILCG 161
Cdd:PRK12464   1 ILGSTGSIGTSALDVVS--AHPEH-FKVVGLTANYNIELLEQQIKRFQPRIVSVADKELADTLRT---RLSANTSKITYG 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 162 DEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAGFFLKKLLNIHkNAKIIPVDSEHSAIFQCL 241
Cdd:PRK12464  75 TDGLIAVATHPGSDLVLSSVVGAAGLLPTIEALKAKKDIALANKETLVAAGHIVTDLAKQN-GCRLIPVDSEHSAIFQCL 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 242 --DNNKvlktkclqdnfskinNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLEVIET 319
Cdd:PRK12464 154 ngENNK---------------EIDKLIVTASGGAFRDKTREEMATLTAKDALKHPNWLMGAKLTIDSATLMNKGFEVIEA 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 320 HFLFDVDYNDIEVIVHKECIIHSCVEFIDKSVISQMYYPDMQIPILYSLTWPDRIKTNLKPLDLAQVSTLTFHKPSLEHF 399
Cdd:PRK12464 219 HWLFDIPYEKIDVLIHKESIIHSLVEFIDGSVLAQLGAPDMRMPIQYAFHYPTRLPSSYEKLNLLEIGSLHFEKPDLEKF 298
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 400 PCIKLAYQAGIKGNFYPTVLNASNEIANNLFLNNKIKYFDISSIISQVLESFNSQkvSENSEDlmkQILQIHSWAKDKAT 479
Cdd:PRK12464 299 PCLQYAYEAGKIGGTTPAVLNAANEIANALFLKNRIAFFDIEKTIYATLEAHHNV--KDPSLD---DILEADAWARRYAN 373

                 ....*
gi 124810261 480 DIYNK 484
Cdd:PRK12464 374 QLLIK 378
PLN02696 PLN02696
1-deoxy-D-xylulose-5-phosphate reductoisomerase
76-480 4.21e-124

1-deoxy-D-xylulose-5-phosphate reductoisomerase


Pssm-ID: 215374  Cd Length: 454  Bit Score: 369.51  E-value: 4.21e-124
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261  76 KPInvAIFGSTGSIGTNALNIIRECnkiENVFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELVKNIkDYK 155
Cdd:PLN02696  58 KPI--SLLGSTGSIGTQTLDIVAEN---PDKFKVVALAAGSNVTLLADQVRKFKPKLVAVRNESLVDELKEALADL-DDK 131
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 156 PIILCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAGFFLKKLLNIHkNAKIIPVDSEHS 235
Cdd:PLN02696 132 PEIIPGEEGIVEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAKKH-GVKILPADSEHS 210
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 236 AIFQCLDNnkvLKTKCLQdnfskinninKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLE 315
Cdd:PLN02696 211 AIFQCIQG---LPEGGLR----------RIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLMNKGLE 277
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 316 VIETHFLFDVDYNDIEVIVHKECIIHSCVEFIDKSVISQMYYPDMQIPILYSLTWPDRI---KTNLKPLDLAQVSTLTFH 392
Cdd:PLN02696 278 VIEAHYLFGADYDDIDIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPDRVpcsEITWPRLDLCKLGSLTFK 357
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261 393 KPSLEHFPCIKLAYQAGIKGNFYPTVLNASNEIANNLFLNNKIKYFDISSIISQVLESFNSQKVSENSedlMKQILQIHS 472
Cdd:PLN02696 358 APDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKIGYLDIFKVIELTCEAHKEELVTSPS---LEDILHYDL 434

                 ....*...
gi 124810261 473 WAKDKATD 480
Cdd:PLN02696 435 WAREYAAE 442
DXP_reductoisom pfam02670
1-deoxy-D-xylulose 5-phosphate reductoisomerase; This is a family of 1-deoxy-D-xylulose ...
80-212 2.15e-50

1-deoxy-D-xylulose 5-phosphate reductoisomerase; This is a family of 1-deoxy-D-xylulose 5-phosphate reductoisomerases. This enzyme catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate in the presence of NADPH. This reaction is part of the terpenoid biosynthesis pathway.


Pssm-ID: 460644 [Multi-domain]  Cd Length: 127  Bit Score: 168.04  E-value: 2.15e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261   80 VAIFGSTGSIGTNALNIIRECnkiENVFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELVKNIKdykPIIL 159
Cdd:pfam02670   1 ITILGSTGSIGTQTLDVIRRH---PDRFEVVALAAGRNVELLAEQIKEFKPKYVAVADEEAAEELKAALAGTG---TEVL 74
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 124810261  160 CGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAG 212
Cdd:pfam02670  75 AGEEGLCEVAALPEADIVMAAIVGAAGLLPTLAAIKAGKRIALANKESLVAAG 127
DXP_redisom_C pfam08436
1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain; This domain is found to the ...
227-323 2.43e-50

1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain; This domain is found to the C-terminus of pfam02670 domains in bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases which catalyze the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate in the presence of NADPH.


Pssm-ID: 462477 [Multi-domain]  Cd Length: 84  Bit Score: 166.03  E-value: 2.43e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261  227 IIPVDSEHSAIFQCLDNNKvlktkclqdnfskINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDS 306
Cdd:pfam08436   1 ILPVDSEHSAIFQCLPGGS-------------QGEVEKIILTASGGPFRGKPREELANVTPEQALKHPNWSMGAKITIDS 67
                          90
                  ....*....|....*..
gi 124810261  307 ATMMNKGLEVIETHFLF 323
Cdd:pfam08436  68 ATMMNKGLEVIEAHWLF 84
DXPR_C pfam13288
DXP reductoisomerase C-terminal domain; This is the C-terminal domain of the ...
358-477 7.84e-47

DXP reductoisomerase C-terminal domain; This is the C-terminal domain of the 1-deoxy-D-xylulose-5-phosphate reductoisomerase enzyme. This domain forms a left handed super-helix.


Pssm-ID: 463830 [Multi-domain]  Cd Length: 116  Bit Score: 157.97  E-value: 7.84e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124810261  358 PDMQIPILYSLTWPDRIkTNLKPLDLAQVSTLTFHKPSLEHFPCIKLAYQAGIKGNFYPTVLNASNEIANNLFLNNKIKY 437
Cdd:pfam13288   3 PDMRLPIAYALSYPERL-SGVEPLDLAKLGSLTFEEPDLERFPCLKLAYEALRAGGTAPAVLNAANEVAVAAFLAGKIGF 81
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 124810261  438 FDISSIISQVLESFNSQKVSenseDLmKQILQIHSWAKDK 477
Cdd:pfam13288  82 LDIPDIIEKVLEAHDGIEPP----SL-EDILEADAEAREY 116
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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